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CBL proteins interact with CIPK serine-threonine protein kinases. 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SMALL AUXIN UPREGULATED RNA 57", "gene_names_refseq": "SAUR57; SMALL AUXIN UPREGULATED RNA 57", "protein_names_uniprotkb": "SAUR-like auxin-responsive protein family", "protein_names_refseq": "SAUR-like auxin-responsive protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G53250)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130713;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus", "go_biological_process": "GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A1I9LQF0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6ID77-1", "uniprot_id": [ { "id": "MED11_ARATH", "url": "https://www.uniprot.org/uniprot/Q6ID77", "type": "external" } ], "mass": 13322.0, "length": 115, "protein_name": "Mediator of RNA polymerase II transcription subunit 11", "gene_name": "MED11", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_001327600", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327600", "type": "external" } ], "gene_names_uniprotkb": "MED11; MED11_1; T13O15", "gene_names_refseq": "", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 11", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01435)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;17560376;22021418;23111157;27862469", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6ID77-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84J95-1", "uniprot_id": [ { "id": "GASA5_ARATH", "url": "https://www.uniprot.org/uniprot/Q84J95", "type": "external" } ], "mass": 10845.0, "length": 97, "protein_name": "Gibberellin-regulated protein 5", "gene_name": "GASA5", "organism": "Arabidopsis", "refseq_name": "GAST1 protein homolog 5", "refseq_ac": [ { "id": "NP_566186", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566186", "type": "external" } ], "gene_names_uniprotkb": "GASA5; F13E7; GAST1 protein homolog 5", "gene_names_refseq": "GASA5; GAST1 protein homolog 5", "protein_names_uniprotkb": "Gibberellin-regulated protein 5; GAST1 protein homolog 5", "protein_names_refseq": "GAST1 protein homolog 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02885)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14593172;19190987;21835493;27862469", "class_list": "", "function": "Gibberellin-regulated protein that acts as a negative regulator of gibberellin-induced flowering and stem growth. May inhibit flowering and inflorescence growth via a pathway involving GAI and by enhancing FLC expression and repressing FT and LFY. Acts as a negative regulator in thermotolerance by resogulating both salicylic acid (SA) signaling and heat shock-protein accumulation., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0009506 plasmodesma", "go_biological_process": "GO:0009408 response to heat;GO:0009751 response to salicylic acid;GO:0010286 heat acclimation;GO:0009740 gibberellic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84J95-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7X9V2-1", "uniprot_id": [ { "id": "PIE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7X9V2", "type": "external" } ], "mass": 234048.0, "length": 2055, "protein_name": "Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1", "gene_name": "PIE1", "organism": "Arabidopsis", "refseq_name": "SNF2 domain-containing protein / helicase domain-containing protein", "refseq_ac": [ { "id": "NP_187887", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187887", "type": "external" } ], "gene_names_uniprotkb": "PIE1; CHR13; MBK21.19; SRCAP; chr13", "gene_names_refseq": "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1; PIE1; SRCAP; chr13", "protein_names_uniprotkb": "Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1; 3.6.4.12; AtCHR13; Independent early flowering 1 protein; Protein CHROMATIN REMODELING 13", "protein_names_refseq": "SNF2 domain-containing protein / helicase domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G12810)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10819329;11130713;12837955;16547115;17142478;17220196;17470967;17988222;18463617;19121105;20466843;21768351;23328941;23572148;23660473;23776212;24265739;25561503;27862469;28011693;29654922;30833711", "class_list": "", "function": "Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling. Probable DNA-dependent ATPase. Not involved in the repression of FLC in gametophytes, but required for the reactivation of FLC in early embryos and for the maintenance of full activation of FLC in late embryos., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 18, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LTV5", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0042393 histone binding;GO:0003678 DNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016514 SWI/SNF complex;GO:0000812 Swr1 complex;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0030154 cell differentiation;GO:0046686 response to cadmium ion;GO:0009908 flower development;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q7X9V2-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XA86-1", "uniprot_id": [ { "id": "ZDH11_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XA86", "type": "external" } ], "mass": 39228.0, "length": 340, "protein_name": "Protein S-acyltransferase 10", "gene_name": "PAT10", "organism": "Arabidopsis", "refseq_name": "DHHC-type zinc finger family protein", "refseq_ac": [ { "id": "NP_566950", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566950", "type": "external" } ], "gene_names_uniprotkb": "PAT10; AtPAT10; F26O13.30; PROTEIN S-ACYL TRANSFERASE 10", "gene_names_refseq": "AtPAT10; PAT10; PROTEIN S-ACYL TRANSFERASE 10", "protein_names_uniprotkb": "Protein S-acyltransferase 10; 2.3.1.225; Probable palmitoyltransferase At3g51390; Zinc finger DHHC domain-containing protein At3g51390", "protein_names_refseq": "DHHC-type zinc finger family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51390)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;22968831;23482856;25561503;27862469", "class_list": "", "function": "S-acyltransferase involved in protein lipid modification. Catalyzes the palmitoylation of proteins peripheral or integral to the tonoplast. Required for the tonoplast localization of CBL2, CBL3 and CBL6, but not for the plasma membrane localization of CBL9, for the endosome localization of RABF1 or for the endomembrane localization of RABF2B., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAV8;Q9SD10", "ec_number_list": [ { "id": "2.3.1.225", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.225", "type": "external" } ], "go_molecular_function": "GO:0019706 protein-cysteine S-palmitoyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0000325 plant-type vacuole;GO:0009705 plant-type vacuole membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0006612 protein targeting to membrane;GO:0009651 response to salt stress;GO:0099402 plant organ development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q7XA86-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q766Z3-1", "uniprot_id": [ { "id": "REV3_ARATH", "url": "https://www.uniprot.org/uniprot/Q766Z3", "type": "external" } ], "mass": 210848.0, "length": 1890, "protein_name": "DNA polymerase zeta catalytic subunit", "gene_name": "REV3", "organism": "Arabidopsis", "refseq_name": "recovery protein 3", "refseq_ac": [ { "id": "NP_176917", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176917", "type": "external" } ], "gene_names_uniprotkb": "REV3; ATREV3; F12B7.5; T1F15.3; T1F15_3; recovery protein 3", "gene_names_refseq": "ATREV3; REV3; T1F15.3; T1F15_3; recovery protein 3", "protein_names_uniprotkb": "DNA polymerase zeta catalytic subunit; 2.7.7.7; AtREV3; Protein reversionless 3-like", "protein_names_refseq": "recovery protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67500)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;12953110;15908599;21030509;21549648;22060019;27862469;30833711", "class_list": "", "function": "Catalytic subunit of the error prone DNA polymerase zeta. Involved in damage-tolerance mechanisms through translesion DNA synthesis., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O64795;Q9CAG6", "ec_number_list": [ { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.102", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.102", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "3.4.23.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.23.-", "type": "external" }, { "id": "4.2.99.-", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.-", "type": "external" } ], "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0000166 nucleotide binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016035 zeta DNA polymerase complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006974 DNA damage response;GO:0009411 response to UV;GO:0000724 double-strand break repair via homologous recombination;GO:0042276 error-prone translesion synthesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q766Z3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7X9I0-1", "uniprot_id": [ { "id": "AGL65_ARATH", "url": "https://www.uniprot.org/uniprot/Q7X9I0", "type": "external" } ], "mass": 44877.0, "length": 389, "protein_name": "Agamous-like MADS-box protein AGL65", "gene_name": "AGL65", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 65", "refseq_ac": [ { "id": "NP_001321506", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321506", "type": "external" } ], "gene_names_uniprotkb": "AGL65; AGAMOUS-like 65; F6A14.14; F6A14_14", "gene_names_refseq": "AGAMOUS-like 65; AGL65; F6A14.14; F6A14_14", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL65", "protein_names_refseq": "AGAMOUS-like 65", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18750)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12837945;12949148;19211705;27862469", "class_list": "", "function": "Probable transcription factor that forms a heterodimer with the MADS-box protein AGL104 and is involved in the regulation of pollen maturation at the late stages of pollen development and pollen tube growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q76K80;Q9M9U6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009555 pollen development;GO:0010152 pollen maturation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q7X9I0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJU0-1", "uniprot_id": [ { "id": "LHWL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJU0", "type": "external" } ], "mass": 59576.0, "length": 527, "protein_name": "Transcription factor bHLH157", "gene_name": "BHLH157; LHL3", "organism": "Arabidopsis", "refseq_name": "Serine/threonine-protein kinase WNK (With No Lysine)-like protein", "refseq_ac": [ { "id": "NP_001117547", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117547", "type": "external" } ], "gene_names_uniprotkb": "BHLH157; LHL3; F1N19; LL1; LONESOME HIGHWAY LIKE 3", "gene_names_refseq": "LHL3; LL1; LONESOME HIGHWAY LIKE 3", "protein_names_uniprotkb": "Transcription factor bHLH157; AtbHLH157; BHLH transcription factor epsilon; Basic helix-loop-helix protein 157; LONESOME HIGHWAY-like protein 2; bHLH 157; bHLH epsilon; bHLH transcription factor bHLH157", "protein_names_refseq": "Serine/threonine-protein kinase WNK (With No Lysine)-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G64625)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14600211;17626058;27862469", "class_list": "", "function": "Transcription factor that may regulate root development., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H7K3;C0SV15;Q9SGV2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0007140 male meiotic nuclear division;GO:0051321 meiotic cell cycle;GO:0010089 xylem development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q7XJU0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7GB25-1", "uniprot_id": [ { "id": "AB5C_ARATH", "url": "https://www.uniprot.org/uniprot/Q7GB25", "type": "external" } ], "mass": 168574.0, "length": 1514, "protein_name": "ABC transporter C family member 5", "gene_name": "ABCC5", "organism": "Arabidopsis", "refseq_name": "multidrug resistance-associated protein 5", "refseq_ac": [ { "id": "NP_171908", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171908", "type": "external" } ], "gene_names_uniprotkb": "ABCC5; ATABCC5; ATMRP5; ATP-binding cassette C5; F20D22.11; MRP5; MULTIDRUG RESISTANCE PROTEIN 5", "gene_names_refseq": "ABCC5; ARABIDOPSIS THALIANA ATP BINDING CASSETTE TRANSPORTER C5; ATABCC5; ATMRP5; ATP BINDING CASSETTE TRANSPORTER C5; ATP-binding cassette C5; Arabidopsis thaliana ATP-binding cassette C5; MULTIDRUG RESISTANCE PROTEIN 5; multidrug resistance-associated protein 5", "protein_names_uniprotkb": "ABC transporter C family member 5; 7.6.2.2; ABC transporter ABCC.5; ATP-energized glutathione S-conjugate pump 5; AtABCC5; Glutathione S-conjugate-transporting ATPase 5; Multidrug resistance-associated protein 5", "protein_names_refseq": "multidrug resistance-associated protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04120)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;11296221;11346655;11855639;12430019;12943546;14684837;18299247;19797057;20466843;22060019;23111157;25561503;27862469", "class_list": "", "function": "Pump for glutathione S-conjugates. Involved in regulation of K(+) and Na(+) cell content. Mediates resistance to NaCl and Li(+), confers sensitivity to sulfonylurea drugs such as glibenclamide (inducer of stomatal opening), and required for stomatal opening regulation by auxin, abscisic acid (ABA) and external Ca(2+). Transports oestradiol-17-(beta-D-glucuronide) (E(2)17G). Involved in the root auxin content regulation that controls the transition from primary root elongation to lateral root formation. Plays a role in ABA-mediated germination inhibition (PubMed:11296221, PubMed:11855639, PubMed:12943546, PubMed:14684837). High-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytic acid storage. Required for phytic acid accumulation in developing seeds. Phytic acid is the primary storage form of phosphorus in cereal grains and other plant seeds (PubMed:19797057)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "O65619;Q56ZX0", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0008559 ABC-type xenobiotic transporter activity;GO:0016887 ATP hydrolysis activity;GO:0008281 sulfonylurea receptor activity", "go_cellular_component": "GO:0005774 vacuolar membrane;GO:0005773 vacuole;GO:0000325 plant-type vacuole;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0009651 response to salt stress;GO:0030007 intracellular potassium ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q7GB25-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XA74-1", "uniprot_id": [ { "id": "GDL21_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XA74", "type": "external" } ], "mass": 46083.0, "length": 417, "protein_name": "Inactive GDSL esterase/lipase-like protein 25", "gene_name": "MVP1", "organism": "Arabidopsis", "refseq_name": "GDSL-like Lipase/Acylhydrolase superfamily protein", "refseq_ac": [ { "id": "NP_175805", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175805", "type": "external" } ], "gene_names_uniprotkb": "MVP1; ERMO3; F15I1.11; F15I1_11; GLL25; GOLD36; GOLGI DEFECTS 36; MODIFIED VACUOLE PHENOTYPE 1; NUCLEAR CAGE; NUC", "gene_names_refseq": "ENDOPLASMIC RETICULUM MORPHOLOGY 3; ERMO3; F15I1.11; F15I1_11; GOLD36; GOLGI DEFECTS 36; MODIFIED VACUOLE PHENOTYPE 1; MVP1; NUCLEAR CAGE; NUC", "protein_names_uniprotkb": "Inactive GDSL esterase/lipase-like protein 25; GDSL-like lipase 25; Myrosinase-associated protein GLL25; Protein ENDOPLASMIC RETICULUM MORPHOLOGY 3; Protein GOLGI DEFECTS 36; Protein MODIFIED VACUOLE PHENOTYPE 1; Protein NUCLEAR CAGE", "protein_names_refseq": "GDSL-like Lipase/Acylhydrolase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54030)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;15522763;18467340;18819574;19880612;20626647;23155454;24330158;27862469", "class_list": "", "function": "Involved in organization of the endomembrane system and is required for endoplasmic reticulum morphology and organelle distribution. May act by inhibiting the formation of PYK10 complex by binding to GLL23 and exporting it from the ER. Required for proper subcellular localization of myrosinase TGG2. Has no lipase or esterase activity., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 3, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q8LA76;Q9SYF9", "ec_number_list": [], "go_molecular_function": "GO:0016788 hydrolase activity, acting on ester bonds", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005773 vacuole;GO:0009506 plasmodesma;GO:0000325 plant-type vacuole;GO:0009507 chloroplast", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0007029 endoplasmic reticulum organization;GO:0032527 protein exit from endoplasmic reticulum", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q7XA74-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7G9P4-1", "uniprot_id": [ { "id": "ALDO3_ARATH", "url": "https://www.uniprot.org/uniprot/Q7G9P4", "type": "external" } ], "mass": 146701.0, "length": 1332, "protein_name": "Abscisic-aldehyde oxidase", "gene_name": "AAO3", "organism": "Arabidopsis", "refseq_name": "abscisic aldehyde oxidase 3", "refseq_ac": [ { "id": "NP_001077966", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077966", "type": "external" } ], "gene_names_uniprotkb": "AAO3; ABSCISIC ALDEHYDE OXIDASE 3; AO4; AOdelta; Aldehyde oxidase delta; At-AO3; AtAAO3; F20F1.2; F20F1_2; abscisic aldehyde oxidase 3", "gene_names_refseq": "AAO3; ABSCISIC ALDEHYDE OXIDASE 3; AOdelta; Aldehyde oxidase delta; Arabidopsis thaliana aldehyde oxidase 3; At-AO3; AtAAO3; F20F1.2; F20F1_2; abscisic aldehyde oxidase 3", "protein_names_uniprotkb": "Abscisic-aldehyde oxidase; 1.2.3.14; 1.2.3.7; AO-3; Aldehyde oxidase 3; AtAO-3; AtAO4; IAA oxidase; Indole-3-acetaldehyde oxidase", "protein_names_refseq": "abscisic aldehyde oxidase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27150)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617197;10972874;11050171;11779861;12417697;15064376;15122034;15574845;16930325;19309463;20173027;26187819;27862469;9489015;9615466", "class_list": "", "function": "In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. AO-delta may be involved in the last step of abscisic acid biosynthesis, at least in leaves and seeds. In vitro, AO-delta oxidizes abscisic aldehyde to abscisic acid (ABA) (PubMed:10972874). In vitro, AO-delta also uses 1-naphthaldehyde, indole-3-aldehyde (IAld), benzaldehyde and cinnamaldehyde as substrate; the AAO2-AAO3 dimer also uses abscisic aldehyde as substrate., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O64429;Q7GD73;Q9SIG7;Q9SLZ2", "ec_number_list": [ { "id": "1.2.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.1", "type": "external" }, { "id": "1.2.3.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.7", "type": "external" }, { "id": "1.2.3.14", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.14", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0071949 FAD binding;GO:0031625 ubiquitin protein ligase binding;GO:0004031 aldehyde oxidase activity;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast;GO:0005737 cytoplasm", "go_biological_process": "GO:0009688 abscisic acid biosynthetic process;GO:0009851 auxin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q7G9P4-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O81027-1", "uniprot_id": [ { "id": "HMGCL_ARATH", "url": "https://www.uniprot.org/uniprot/O81027", "type": "external" } ], "mass": 50577.0, "length": 468, "protein_name": "Hydroxymethylglutaryl-CoA lyase, mitochondrial", "gene_name": "HGML; HMGCL", "organism": "Arabidopsis", "refseq_name": "Aldolase superfamily protein", "refseq_ac": [ { "id": "NP_001324446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324446", "type": "external" } ], "gene_names_uniprotkb": "HGML; HMGCL; F12C20.16", "gene_names_refseq": "", "protein_names_uniprotkb": "Hydroxymethylglutaryl-CoA lyase, mitochondrial; 3-hydroxy-3-methylglutarate-CoA lyase; 4.1.3.4; HL; HMG-CoA lyase", "protein_names_refseq": "Aldolase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26800)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;14764908;25561503;27862469", "class_list": "", "function": "Involved in the catabolism of branched amino acids such as leucine., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L7K2;Q9FPE2", "ec_number_list": [ { "id": "4.1.3.4", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.3.4", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004419 hydroxymethylglutaryl-CoA lyase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0009507 chloroplast", "go_biological_process": "GO:0046951 ketone body biosynthetic process;GO:0006552 L-leucine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O81027-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJM2-1", "uniprot_id": [ { "id": "CCD7_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJM2", "type": "external" } ], "mass": 69453.0, "length": 618, "protein_name": "Carotenoid cleavage dioxygenase 7, chloroplastic", "gene_name": "CCD7", "organism": "Arabidopsis", "refseq_name": "carotenoid cleavage dioxygenase 7", "refseq_ac": [ { "id": "NP_001318427", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318427", "type": "external" } ], "gene_names_uniprotkb": "CCD7; ATCCD7; MAX3; NCED7; T14P1.21", "gene_names_refseq": "ATCCD7; CCD7; MAX3; T14P1.21; carotenoid cleavage dioxygenase 7", "protein_names_uniprotkb": "Carotenoid cleavage dioxygenase 7, chloroplastic; 1.13.11.68; AtCCD7; AtNCED7; Beta,beta-carotene 9',10'-oxygenase; Protein MORE AXILLARY BRANCHING 3; Protein MORE AXILLARY GROWTH 3", "protein_names_refseq": "carotenoid cleavage dioxygenase 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G44990)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;15268852;15342640;16507088;21243360;22422982;23204501;27862469", "class_list": "", "function": "Involved in strigolactones biosynthesis by cleaving asymmetrically a variety of linear and cyclic carotenoids at the 9-10 double bond. Produces one C(13) beta-ionone and the C(27) 10'-apo-beta-carotenal. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds. No activity on lycopene, lutein, zeaxanthin, violaxanthin or neoxanthin. Probably not involved in abscisic acid biosynthesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IV47;Q0WMG3", "ec_number_list": [ { "id": "1.13.11.68", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.68", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0045549 9-cis-epoxycarotenoid dioxygenase activity;GO:0102395 9-cis-beta-carotene 9',10'-cleavage oxygenase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009635 response to herbicide;GO:0016121 carotene catabolic process;GO:0016124 xanthophyll catabolic process;GO:0009926 auxin polar transport;GO:0010223 secondary shoot formation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q7XJM2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XA73-1", "uniprot_id": [ { "id": "TIF4A_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XA73", "type": "external" } ], "mass": 34423.0, "length": 313, "protein_name": "Protein TIFY 4A", "gene_name": "PPD1; TIFY4A", "organism": "Arabidopsis", "refseq_name": "TIFY domain/Divergent CCT motif family protein", "refseq_ac": [ { "id": "NP_567442", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567442", "type": "external" } ], "gene_names_uniprotkb": "PPD1; TIFY4A; FCAALL; PEAPOD 1; PPD1; TIFY4A", "gene_names_refseq": "PEAPOD 1; PLANT-SPECIFIC PUTATIVE DNA-BINDING PROTEIN 1; PPD1; TIFY4A", "protein_names_uniprotkb": "Protein TIFY 4A; Protein PEAPOD 1", "protein_names_refseq": "TIFY domain/Divergent CCT motif family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14713)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;16916932;19253305;20360743;27862469;9461215", "class_list": "", "function": "Regulates the arrest of dispersed meristematic cells during lamina development., [UniProtKB, PubMed]; Repressor of jasmonate responses., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3E6U2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0042127 regulation of cell population proliferation;GO:0009611 response to wounding;GO:0031347 regulation of defense response;GO:0048366 leaf development;GO:2000022 regulation of jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q7XA73-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XZP5-1", "uniprot_id": [ { "id": "APX5_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XZP5", "type": "external" } ], "mass": 30895.0, "length": 279, "protein_name": "L-ascorbate peroxidase 5, peroxisomal", "gene_name": "APX5", "organism": "Arabidopsis", "refseq_name": "ascorbate peroxidase 5", "refseq_ac": [ { "id": "NP_195321", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195321", "type": "external" } ], "gene_names_uniprotkb": "APX5; F4B14_240; T19K4.100; ascorbate peroxidase 5", "gene_names_refseq": "APX5; T19K4.100; ascorbate peroxidase 5", "protein_names_uniprotkb": "L-ascorbate peroxidase 5, peroxisomal; 1.11.1.11; AtAPx04", "protein_names_refseq": "ascorbate peroxidase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35970)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11910074;12068123;14593172;20215589;21057222;27862469", "class_list": "", "function": "Plays a key role in hydrogen peroxide removal., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65634", "ec_number_list": [ { "id": "1.11.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0016688 L-ascorbate peroxidase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005778 peroxisomal membrane;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0000302 response to reactive oxygen species;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q7XZP5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7FRS8-1", "uniprot_id": [ { "id": "CNBLA_ARATH", "url": "https://www.uniprot.org/uniprot/Q7FRS8", "type": "external" } ], "mass": 29342.0, "length": 256, "protein_name": "Calcineurin B-like protein 10", "gene_name": "CBL10", "organism": "Arabidopsis", "refseq_name": "calcineurin B-like protein 10", "refseq_ac": [ { "id": "NP_195026", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195026", "type": "external" } ], "gene_names_uniprotkb": "CBL10; ATCBL10; F26P21.120; F26P21_120; SCABP8; calcineurin B-like protein 10", "gene_names_refseq": "ATCBL10; CBL10; F26P21.120; F26P21_120; SCABP8; SOS3-LIKE CALCIUM BINDING PROTEIN 8; calcineurin B-like protein 10", "protein_names_uniprotkb": "Calcineurin B-like protein 10; SCaBP8; SOS3-like calcium binding protein 8", "protein_names_refseq": "calcineurin B-like protein 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33000)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;11910074;12045290;14730064;17449811;17825054;19448033;19832944;22253446;23331977;27862469", "class_list": "", "function": "Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82641;Q2HIW7;Q8GYR3;Q8GZD7", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0019900 kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005886 plasma membrane;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0019722 calcium-mediated signaling;GO:0043266 regulation of potassium ion transport;GO:0042538 hyperosmotic salinity response;GO:0050801 monoatomic ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q7FRS8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XA67-1", "uniprot_id": [ { "id": "MTN2_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XA67", "type": "external" } ], "mass": 27462.0, "length": 254, "protein_name": "5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase", "gene_name": "MTN2", "organism": "Arabidopsis", "refseq_name": "Phosphorylase superfamily protein", "refseq_ac": [ { "id": "NP_195210", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195210", "type": "external" } ], "gene_names_uniprotkb": "MTN2; ATMTAN2; ATMTN2; F11I11.80; F11I11_80; MTAN2; T11I11.80", "gene_names_refseq": "ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 2; ATMTAN2; ATMTN2; F11I11.80; F11I11_80; METHYLTHIOADENOSINE NUCLEOSIDASE 2; MTAN2; MTN2; methylthioadenosine nucleosidase 2", "protein_names_uniprotkb": "5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; 3.2.2.9; 5'-methylthioadenosine nucleosidase 2; AdoHcy nucleosidase; AtMTAN2; MTA nucleosidase 2; MTA/SAH nucleosidase; S-adenosylhomocysteine nucleosidase; SAH nucleosidase; SRH nucleosidase", "protein_names_refseq": "Phosphorylase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34840)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;17144895;18342331;19249293;20345605;20554051;22223895;27862469", "class_list": "", "function": "Enzyme of the methionine cycle that catalyzes the irreversible cleavage of the glycosidic bond in 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to a lesser extent, to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively (PubMed:18342331, PubMed:19249293). Contributes to the maintenance of AdoMet homeostasis and is required to sustain high rates of ethylene synthesis., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SW50", "ec_number_list": [ { "id": "3.2.2.9", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.9", "type": "external" }, { "id": "3.2.2.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.16", "type": "external" } ], "go_molecular_function": "GO:0008782 adenosylhomocysteine nucleosidase activity;GO:0008930 methylthioadenosine nucleosidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0009116 nucleoside metabolic process;GO:0019509 L-methionine salvage from methylthioadenosine;GO:0010087 phloem or xylem histogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q7XA67-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4JRH5-1", "uniprot_id": [ { "id": "F4JRH5_ARATH", "url": "https://www.uniprot.org/uniprot/F4JRH5", "type": "external" } ], "mass": 21381.0, "length": 184, "protein_name": "Far-red impaired responsive (FAR1) family protein", "gene_name": "FRF3", "organism": "Arabidopsis", "refseq_name": "Far-red impaired responsive (FAR1) family protein", "refseq_ac": [ { "id": "NP_193021", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193021", "type": "external" } ], "gene_names_uniprotkb": "FRF3; T20K18.200; T20K18_200", "gene_names_refseq": "T20K18.200; T20K18_200", "protein_names_uniprotkb": "Far-red impaired responsive (FAR1) family protein", "protein_names_refseq": "Far-red impaired responsive (FAR1) family protein", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "10617198;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4JRH5-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PDV2-1", "uniprot_id": [ { "id": "SRC28_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PDV2", "type": "external" } ], "mass": 28028.0, "length": 236, "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL28", "gene_name": "SCL28", "organism": "Arabidopsis", "refseq_name": "SC35-like splicing factor 28", "refseq_ac": [ { "id": "NP_197382", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197382", "type": "external" } ], "gene_names_uniprotkb": "SCL28; At-SCL28; F17K4.60; F17K4_60; SC35-like splicing factor 28", "gene_names_refseq": "At-SCL28; F17K4.60; F17K4_60; SC35-like splicing factor 28; SCL28", "protein_names_uniprotkb": "Serine/arginine-rich SC35-like splicing factor SCL28; 28 kDa SC35-like splicing factor; At-SCL28; AtSCL28; SC35-like splicing factor 28; Serine/arginine-rich splicing factor 28", "protein_names_refseq": "SC35-like splicing factor 28", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18810)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "11130714;11910074;12176998;15133128;15166240;16497658;17147637;18433157;18463617;19245862;20466843;20884799;21935421;23111157;25561503;27862469;30833711", "class_list": "", "function": "Involved in intron recognition and spliceosome assembly (Probable). Probably active at the 5' splice sites., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MFG8;Q8GTR7;Q9FYB0", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q1PDV2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "C0LGT5-1", "uniprot_id": [ { "id": "Y5169_ARATH", "url": "https://www.uniprot.org/uniprot/C0LGT5", "type": "external" } ], "mass": 97252.0, "length": 866, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g16900", "gene_name": "LEAF AND FLOWER RELATED", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": [ { "id": "NP_197192", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197192", "type": "external" } ], "gene_names_uniprotkb": "LEAF AND FLOWER RELATED; F2K13.50; F2K13_50; LFR", "gene_names_refseq": "F2K13.50; F2K13_50; LEAF AND FLOWER RELATED; LFR", "protein_names_uniprotkb": "Probable LRR receptor-like serine/threonine-protein kinase At5g16900; 2.7.11.1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16900)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130714;20064227;27862469", "class_list": "", "function": "", "predicted_glycosites": 11, "predicted_n_glycosites": 10, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 11, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFL1", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "C0LGT5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WTY4-1", "uniprot_id": [ { "id": "VPS2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WTY4", "type": "external" } ], "mass": 24305.0, "length": 222, "protein_name": "Vacuolar protein sorting-associated protein 2 homolog 2", "gene_name": "VPS2.2; VPS22", "organism": "Arabidopsis", "refseq_name": "SNF7 family protein", "refseq_ac": [ { "id": "NP_001119371", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119371", "type": "external" } ], "gene_names_uniprotkb": "VPS2.2; VPS22; CHMP2-2; MFC16.25; MFC16_25; VPS2.2; VPS2", "gene_names_refseq": "MFC16.25; MFC16_25; VPS2.2; VPS2", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 2 homolog 2; AtVPS2-2; Charged multivesicular body protein 2 homolog 2; ESCRT-III complex subunit VPS2 homolog 2", "protein_names_refseq": "SNF7 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44560)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10470850;11130714;14593172;16488176;17090720;22010978;27862469", "class_list": "", "function": "Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H7E8;Q84TF3;Q9FGV7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000815 ESCRT III complex;GO:0005634 nucleus;GO:0005771 multivesicular body", "go_biological_process": "GO:0015031 protein transport;GO:0045324 late endosome to vacuole transport;GO:0032509 endosome transport via multivesicular body sorting pathway;GO:0007034 vacuolar transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WTY4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JA6-1", "uniprot_id": [ { "id": "CESA4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JA6", "type": "external" } ], "mass": 119599.0, "length": 1049, "protein_name": "Cellulose synthase A catalytic subunit 4 [UDP-forming]", "gene_name": "CESA4", "organism": "Arabidopsis", "refseq_name": "cellulose synthase A4", "refseq_ac": [ { "id": "NP_199216", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199216", "type": "external" } ], "gene_names_uniprotkb": "CESA4; IRREGULAR XYLEM 5; IRX5; MRH10.14; MRH10_14; NWS2; cellulose synthase A4", "gene_names_refseq": "CESA4; IRREGULAR XYLEM 5; IRX5; MRH10.14; MRH10_14; NWS2; cellulose synthase A4", "protein_names_uniprotkb": "Cellulose synthase A catalytic subunit 4 [UDP-forming]; 2.4.1.12; AtCesA4; AtIRX5; Protein IRREGULAR XYLEM 5", "protein_names_refseq": "cellulose synthase A4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44030)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10938350;11130714;11178255;12481071;12538856;12897249;14593172;17351116;17427041;22074104;25561503;27277162;27387950;27862469;9405937", "class_list": "glycogene;glycosyltransferase", "function": "Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WQW9;Q8GZN8;Q9FNC3", "ec_number_list": [ { "id": "2.4.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.12", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0016760 cellulose synthase (UDP-forming) activity;GO:0016759 cellulose synthase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0030244 cellulose biosynthetic process;GO:0071555 cell wall organization;GO:0009832 plant-type cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q84JA6-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000010001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q76E23-1", "uniprot_id": [ { "id": "IF4G_ARATH", "url": "https://www.uniprot.org/uniprot/Q76E23", "type": "external" } ], "mass": 187921.0, "length": 1727, "protein_name": "Eukaryotic translation initiation factor 4G", "gene_name": "EIF4G", "organism": "Arabidopsis", "refseq_name": "eukaryotic translation initiation factor 4G", "refseq_ac": [ { "id": "NP_001078318", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078318", "type": "external" } ], "gene_names_uniprotkb": "EIF4G; CUCUMOVIRUS MULTIPLICATION 2; CUM2; F27H5_30", "gene_names_refseq": "CUCUMOVIRUS MULTIPLICATION 2; CUM2; EIF4G; EUKARYOTIC TRANSLATION INITIATION FACTOR 4G; eukaryotic translation initiation factor 4G", "protein_names_uniprotkb": "Eukaryotic translation initiation factor 4G; Protein cucumovirus multiplication 2; Protein synthesis initiation factor 4G; eIF-4G; eIF4G", "protein_names_refseq": "eukaryotic translation initiation factor 4G", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60240)", "pathway_count": 1, "publication_count": 24, "publication_id_list": "11130713;15163703;16343979;17316629;18463617;19245862;19376835;20466843;20733066;21768351;22631563;23111157;23328941;23572148;23776212;23820729;25561503;26091701;26187819;27862469;28154133;29167316;30833711;9765416", "class_list": "", "function": "Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome. Plays a role in the accumulation of some potyvirus during viral infection. Required for the accumulation of cucumber mosaic virus 3a protein and turnip crinkle virus p28 replication protein during viral infection. These proteins are necessary for cell-to-cell movement of the virus., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 20, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WVG9;Q9LKQ7;Q9LY39;Q9M4Q5", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003743 translation initiation factor activity;GO:0003723 RNA binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0016281 eukaryotic translation initiation factor 4F complex", "go_biological_process": "GO:0006417 regulation of translation;GO:0009615 response to virus;GO:0006413 translational initiation", "synthesized_glycan_count": 0, "hit_score": 2.7, "record_id": "Q76E23-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P10798-1", "uniprot_id": [ { "id": "RBS3B_ARATH", "url": "https://www.uniprot.org/uniprot/P10798", "type": "external" } ], "mass": 20284.0, "length": 181, "protein_name": "Ribulose bisphosphate carboxylase small subunit 3B, chloroplastic", "gene_name": "RBCS-3B; RBCS3B", "organism": "Arabidopsis", "refseq_name": "Ribulose bisphosphate carboxylase (small chain) family protein", "refseq_ac": [ { "id": "NP_198657", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198657", "type": "external" } ], "gene_names_uniprotkb": "RBCS-3B; RBCS3B; ATS3B; MXI10.13; MXI10_13; RBCS; Rubisco small subunit 3B", "gene_names_refseq": "MXI10.13; MXI10_13; RBCS3B; Rubisco small subunit 3B", "protein_names_uniprotkb": "Ribulose bisphosphate carboxylase small subunit 3B, chloroplastic; RuBisCO small subunit 3B", "protein_names_refseq": "Ribulose bisphosphate carboxylase (small chain) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G38410)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;14593172;23111157;23572148;23820729;25561503;27862469;28011693;9330910", "class_list": "", "function": "RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity., [UniProtKB, HAMAP, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FF21", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0019904 protein domain specific binding;GO:0016984 ribulose-bisphosphate carboxylase activity", "go_cellular_component": "GO:0022626 cytosolic ribosome;GO:0009505 plant-type cell wall;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009853 photorespiration;GO:0015979 photosynthesis;GO:0019253 reductive pentose-phosphate cycle;GO:0110102 ribulose bisphosphate carboxylase complex assembly", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P10798-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B3H6R4-1", "uniprot_id": [ { "id": "B3H6R4_ARATH", "url": "https://www.uniprot.org/uniprot/B3H6R4", "type": "external" } ], "mass": 20361.0, "length": 183, "protein_name": "Transcription repressor", "gene_name": "", "organism": "Arabidopsis", "refseq_name": "Ovate family protein", "refseq_ac": [ { "id": "NP_001118449", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118449", "type": "external" } ], "gene_names_uniprotkb": "", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription repressor; Ovate family protein", "protein_names_refseq": "Ovate family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G36026)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617197;27862469", "class_list": "", "function": "Transcriptional repressor that regulates multiple aspects of plant growth and development., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B3H6R4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B3H7H1-1", "uniprot_id": [ { "id": "B3H7H1_ARATH", "url": "https://www.uniprot.org/uniprot/B3H7H1", "type": "external" } ], "mass": 43800.0, "length": 409, "protein_name": "Translation initiation factor eIF2B subunit beta", "gene_name": "", "organism": "Arabidopsis", "refseq_name": "NagB/RpiA/CoA transferase-like superfamily protein", "refseq_ac": [ { "id": "NP_001319491", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319491", "type": "external" } ], "gene_names_uniprotkb": "", "gene_names_refseq": "", "protein_names_uniprotkb": "Translation initiation factor eIF2B subunit beta; eIF2B GDP-GTP exchange factor subunit beta", "protein_names_refseq": "NagB/RpiA/CoA transferase-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G07300)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;19376835;23111157;23572148;26187819;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016740 transferase activity;GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0010494 cytoplasmic stress granule;GO:0005851 eukaryotic translation initiation factor 2B complex", "go_biological_process": "GO:0006413 translational initiation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B3H7H1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B9DHD7-1", "uniprot_id": [ { "id": "VAP22_ARATH", "url": "https://www.uniprot.org/uniprot/B9DHD7", "type": "external" } ], "mass": 43270.0, "length": 386, "protein_name": "Vesicle-associated protein 2-2", "gene_name": "PVA22", "organism": "Arabidopsis", "refseq_name": "vamp/synaptobrevin-associated protein 27-2", "refseq_ac": [ { "id": "NP_001031004", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031004", "type": "external" } ], "gene_names_uniprotkb": "PVA22; F22O13.31; VAP27-2", "gene_names_refseq": "F22O13.31; F22O13_31; VAP27-2; vamp/synaptobrevin-associated protein 27-2", "protein_names_uniprotkb": "Vesicle-associated protein 2-2; AtPVA22; Plant VAP homolog 22; VAMP-associated protein 2-2; Vesicle-associated protein 27-2", "protein_names_refseq": "vamp/synaptobrevin-associated protein 27-2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08820)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;11907339;14593172;17934214;19245862;19423640;19688752;20466843;21768351;22223895;23111157;23572148;23660473;23776212;25561503;27862469;28011693;30833711", "class_list": "", "function": "May play a role in vesicle trafficking., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6UQE9;Q8VXW8;Q9FRQ7", "ec_number_list": [], "go_molecular_function": "GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0090158 endoplasmic reticulum membrane organization;GO:0061817 endoplasmic reticulum-plasma membrane tethering", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "B9DHD7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B9DI20-1", "uniprot_id": [ { "id": "SP13A_ARATH", "url": "https://www.uniprot.org/uniprot/B9DI20", "type": "external" } ], "mass": 39108.0, "length": 359, "protein_name": "Squamosa promoter-binding-like protein 13A", "gene_name": "SPL13A", "organism": "Arabidopsis", "refseq_name": "Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein", "refseq_ac": [ { "id": "NP_001332253", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332253", "type": "external" } ], "gene_names_uniprotkb": "SPL13A; MBA10.13; SPL13", "gene_names_refseq": "MFB16.6; SPL13B; SPL13; SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B; SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13", "protein_names_uniprotkb": "Squamosa promoter-binding-like protein 13A", "protein_names_refseq": "Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50570); (ath:AT5G50670)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "11910074;12202040;14573523;19423640;27862469;28154133", "class_list": "", "function": "Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFW6;Q9LUF4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0001216 DNA-binding transcription activator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009620 response to fungus;GO:0010228 vegetative to reproductive phase transition of meristem;GO:0048653 anther development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B9DI20-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "C0LGV0-1", "uniprot_id": [ { "id": "Y5487_ARATH", "url": "https://www.uniprot.org/uniprot/C0LGV0", "type": "external" } ], "mass": 99613.0, "length": 895, "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g48740", "gene_name": "K24G6.7", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": [ { "id": "NP_199685", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199685", "type": "external" } ], "gene_names_uniprotkb": "K24G6.7", "gene_names_refseq": "K24G6.7; 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F14J22.17; F14J22_17", "gene_names_refseq": "F14J22.17; F14J22_17; ZOP1; Zinc-finger and OCRE domain-containing Protein 1", "protein_names_uniprotkb": "Zinc finger protein ZOP1; Zinc-finger and OCRE domain-containing protein 1", "protein_names_refseq": "C2H2 and C2HC zinc fingers superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49590)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;23524848;25684655;27862469", "class_list": "", "function": "Nucleic acid-binding protein that promotes Pol IV-dependent small interfering RNA (siRNA) accumulation, DNA methylation and transcriptional silencing. May possess both RNA-directed DNA methylation (RdDM)-dependent and -independent roles in transcriptional silencing. Acts as a pre-mRNA splicing factor that associates with several typical components of the splicing machinery as well as with Pol II., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94AV7;Q9FX87", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding;GO:0003690 double-stranded DNA binding;GO:0003725 double-stranded RNA binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0015030 Cajal body;GO:0071011 precatalytic spliceosome", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0080188 gene silencing by siRNA-directed DNA methylation;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q7XA66-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4I8L6-1", "uniprot_id": [ { "id": "F4I8L6_ARATH", "url": "https://www.uniprot.org/uniprot/F4I8L6", "type": "external" } ], "mass": 29245.0, "length": 252, "protein_name": "AGAMOUS-like 67", "gene_name": "AGL67", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 67", "refseq_ac": [ { "id": "NP_001117616", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117616", "type": "external" } ], "gene_names_uniprotkb": "AGL67; AGAMOUS-like 67; F28K19.16; F28K19_16", "gene_names_refseq": "AGAMOUS-like 67; AGL67; F28K19.16; F28K19_16", "protein_names_uniprotkb": "AGAMOUS-like 67", "protein_names_refseq": "AGAMOUS-like 67", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77950)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0009555 pollen development;GO:0010152 pollen maturation;GO:0080092 regulation of pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4I8L6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4ICB5-1", "uniprot_id": [ { "id": "F4ICB5_ARATH", "url": "https://www.uniprot.org/uniprot/F4ICB5", "type": "external" } ], "mass": 55925.0, "length": 491, "protein_name": "Zinc finger (C3HC4-type RING finger) family protein", "gene_name": "IAP1", "organism": "Arabidopsis", "refseq_name": "zinc finger (C3HC4-type RING finger) family protein", "refseq_ac": [ { "id": "NP_001319035", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319035", "type": "external" } ], "gene_names_uniprotkb": "IAP1; F6A14.25; F6A14_25", "gene_names_refseq": "F6A14.25; F6A14_25", "protein_names_uniprotkb": "Zinc finger (C3HC4-type RING finger) family protein", "protein_names_refseq": "zinc finger (C3HC4-type RING finger) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18660)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4ICB5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7Y232-1", "uniprot_id": [ { "id": "U73B4_ARATH", "url": "https://www.uniprot.org/uniprot/Q7Y232", "type": "external" } ], "mass": 53961.0, "length": 484, "protein_name": "UDP-glycosyltransferase 73B4", "gene_name": "UGT73B4", "organism": "Arabidopsis", "refseq_name": "UDP-glycosyltransferase 73B4", "refseq_ac": [ { "id": "NP_179151", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179151", "type": "external" } ], "gene_names_uniprotkb": "UGT73B4; F9O13.4; UDP-glycosyltransferase 73B4", "gene_names_refseq": "UDP-glycosyltransferase 73B4; UGT73B4", "protein_names_uniprotkb": "UDP-glycosyltransferase 73B4; 2.4.1.-; 2.4.1.91; Flavonol 3-O-glucosyltransferase UGT73B4", "protein_names_refseq": "UDP-glycosyltransferase 73B4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G15490)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11042215;11641410;14593172;15352060;16306146;18702669;20466843;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Possesses quercetin 3-O-glucosyltransferase and low 7-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives. Can detoxify the explosive 2,4,6-trinitrotoluene in plant by forming O- or C-glucose conjugates., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EBZ8;Q9ZQG3", "ec_number_list": [ { "id": "2.4.1.237", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.237", "type": "external" }, { "id": "2.4.1.91", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.91", "type": "external" }, { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0035251 UDP-glucosyltransferase activity;GO:0047893 flavonol 3-O-glucosyltransferase activity;GO:0080043 quercetin 3-O-glucosyltransferase activity;GO:0080044 quercetin 7-O-glucosyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0051707 response to other organism;GO:0009636 response to toxic substance;GO:0051555 flavonol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q7Y232-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4IUY8-1", "uniprot_id": [ { "id": "SAC3A_ARATH", "url": "https://www.uniprot.org/uniprot/F4IUY8", "type": "external" } ], "mass": 111260.0, "length": 1006, "protein_name": "SAC3 family protein A", "gene_name": "SAC3A", "organism": "Arabidopsis", "refseq_name": "SAC3/GANP/Nin1/mts3/eIF-3 p25 family", "refseq_ac": [ { "id": "NP_181466", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181466", "type": "external" } ], "gene_names_uniprotkb": "SAC3A; T16B24.2", "gene_names_refseq": "AtSAC3A; SAC3A; T16B24.2; T16B24_2; yeast Sac3 homolog A", "protein_names_uniprotkb": "SAC3 family protein A", "protein_names_refseq": "SAC3/GANP/Nin1/mts3/eIF-3 p25 family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39340)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;19843313;27862469", "class_list": "", "function": "Component of the TREX-2 complex (transcription and export complex 2), a muliprotein complex that functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery (PubMed:19843313)., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "O80947;Q56W50", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0008380 RNA splicing;GO:0000380 alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "F4IUY8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4IZC5-1", "uniprot_id": [ { "id": "CAN1_ARATH", "url": "https://www.uniprot.org/uniprot/F4IZC5", "type": "external" } ], "mass": 36134.0, "length": 323, "protein_name": "Staphylococcal-like nuclease CAN1", "gene_name": "CAN1", "organism": "Arabidopsis", "refseq_name": "Ca-2+ dependent nuclease", "refseq_ac": [ { "id": "NP_567036", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567036", "type": "external" } ], "gene_names_uniprotkb": "CAN1; CAN; F18O21.130", "gene_names_refseq": "CAN1; CAN; Ca-2+ dependent nuclease; calcium dependent nuclease 1", "protein_names_uniprotkb": "Staphylococcal-like nuclease CAN1; 3.1.31.-; AtCAN1; Ca(2+)-dependent nuclease 1; Calcium-dependent nuclease 1", "protein_names_refseq": "Ca-2+ dependent nuclease", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G56170)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10760589;11130713;23102437;27862469", "class_list": "", "function": "Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond. Possesses activity toward the single-stranded DNA, double-stranded DNA and RNA. May be involved in genomic DNA degradation during programmed cell death., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LWC0;Q9LYM4", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0003676 nucleic acid binding;GO:0004521 RNA endonuclease activity;GO:0004518 nuclease activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006401 RNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "F4IZC5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3MK94-1", "uniprot_id": [ { "id": "ECT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q3MK94", "type": "external" } ], "mass": 48232.0, "length": 428, "protein_name": "YTH domain-containing protein ECT1", "gene_name": "ECT1", "organism": "Arabidopsis", "refseq_name": "evolutionarily conserved C-terminal region 1", "refseq_ac": [ { "id": "NP_001030629", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030629", "type": "external" } ], "gene_names_uniprotkb": "ECT1; T11I18.6; T11I18_6", "gene_names_refseq": "ECT1; T11I18.6; T11I18_6; evolutionarily conserved C-terminal region 1", "protein_names_uniprotkb": "YTH domain-containing protein ECT1; Protein EVOLUTIONARILY CONSERVED C-TERMINAL REGION 1", "protein_names_refseq": "evolutionarily conserved C-terminal region 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G03950)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;16113215;19423640;25561503;27862469", "class_list": "", "function": "Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability (By similarity). M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W573;Q9SQR7", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:1990247 N6-methyladenosine-containing RNA reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000932 P-body;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0019722 calcium-mediated signaling;GO:0006402 mRNA catabolic process;GO:0061157 mRNA destabilization;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q3MK94-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4JCR3-1", "uniprot_id": [ { "id": "F4JCR3_ARATH", "url": "https://www.uniprot.org/uniprot/F4JCR3", "type": "external" } ], "mass": 181136.0, "length": 1607, "protein_name": "Ubiquitin carboxyl-terminal hydrolase-related protein", "gene_name": "", "organism": "Arabidopsis", "refseq_name": "Ubiquitin carboxyl-terminal hydrolase-related protein", "refseq_ac": [ { "id": "NP_001118788", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118788", "type": "external" } ], "gene_names_uniprotkb": "", "gene_names_refseq": "", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase-related protein", "protein_names_refseq": "Ubiquitin carboxyl-terminal hydrolase-related protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G47910)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;18463617;20466843;23776212;25561503;27862469;30833711", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016579 protein deubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JCR3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4JUL9-1", "uniprot_id": [ { "id": "ARPC4_ARATH", "url": "https://www.uniprot.org/uniprot/F4JUL9", "type": "external" } ], "mass": 19858.0, "length": 169, "protein_name": "Actin-related protein 2/3 complex subunit 4", "gene_name": "ARPC4", "organism": "Arabidopsis", "refseq_name": "binding protein", "refseq_ac": [ { "id": "NP_001031632", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031632", "type": "external" } ], "gene_names_uniprotkb": "ARPC4; FCAALL.159; dl3115c", "gene_names_refseq": "ARPC4", "protein_names_uniprotkb": "Actin-related protein 2/3 complex subunit 4; Actin-related protein C4; Arp2/3 complex 20 kDa subunit; p20-ARC", "protein_names_refseq": "binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14147)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12913159;15086808;15653407;19801398;27862469;9461215", "class_list": "", "function": "Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23274", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005885 Arp2/3 protein complex;GO:0042995 cell projection", "go_biological_process": "GO:0007015 actin filament organization;GO:0000902 cell morphogenesis;GO:0030041 actin filament polymerization;GO:0034314 Arp2/3 complex-mediated actin nucleation;GO:0045010 actin nucleation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "F4JUL9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84J75-1", "uniprot_id": [ { "id": "PG2B1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84J75", "type": "external" } ], "mass": 35496.0, "length": 321, "protein_name": "Geranylgeranyl transferase type-2 subunit beta 1", "gene_name": "RGTB1", "organism": "Arabidopsis", "refseq_name": "RAB geranylgeranyl transferase beta subunit 1", "refseq_ac": [ { "id": "NP_568259", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568259", "type": "external" } ], "gene_names_uniprotkb": "RGTB1; AtRGTB1; MXC9.17; MXC9_17", "gene_names_refseq": "AtRGTB1; MXC9.17; MXC9_17; RAB geranylgeranyl transferase beta subunit 1; RGTB1", "protein_names_uniprotkb": "Geranylgeranyl transferase type-2 subunit beta 1; 2.5.1.60; AtRGTB1; Geranylgeranyl transferase type II subunit beta 1; Rab geranylgeranyl transferase beta subunit 1; Rab-GGT beta 1", "protein_names_refseq": "RAB geranylgeranyl transferase beta subunit 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G12210)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;20180921;22223895;25316062;26589801;27862469;9501997", "class_list": "", "function": "Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of Rab proteins with the C-terminal sequence -CCXX, CXXX, -XCCX and -XCXC, such as RABA1A, RABA2A, RABF2A and RABG2 (PubMed:26589801). Involved in the geranylgeranylation of RABA2A (PubMed:20180921). In vitro, can prenylate PGGTI targets with the C-terminal sequence Cys-aliphatic-aliphatic-X (CaaX) with leucine in the terminal position. Substrates with the C-terminal sequence -CSIL such as ARAC11/ROP1 or GG2/AGG2 are prenylated independently of REP and when the beta subunit is associated with the alpha subunit RGTA1 (PubMed:26589801)., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]; Required for male fertility and root tip growth., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FMP2", "ec_number_list": [ { "id": "2.5.1.59", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.59", "type": "external" }, { "id": "2.5.1.60", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.60", "type": "external" }, { "id": "2.5.1.58", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.58", "type": "external" } ], "go_molecular_function": "GO:0004663 Rab geranylgeranyltransferase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005968 Rab-protein geranylgeranyltransferase complex", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0018344 protein geranylgeranylation;GO:0009553 embryo sac development;GO:0009555 pollen development;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84J75-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4K162-1", "uniprot_id": [ { "id": "F4K162_ARATH", "url": "https://www.uniprot.org/uniprot/F4K162", "type": "external" } ], "mass": 29560.0, "length": 264, "protein_name": "Histone superfamily protein", "gene_name": "T20D1.10; T20D1_10", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T20D1.10; T20D1_10", "gene_names_refseq": "", "protein_names_uniprotkb": "Histone superfamily protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19490)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;18463617;20466843;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:0001046 core promoter sequence-specific DNA binding;GO:0016251 RNA polymerase II general transcription initiation factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "F4K162-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q75QN6-1", "uniprot_id": [ { "id": "DPHS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q75QN6", "type": "external" } ], "mass": 104235.0, "length": 929, "protein_name": "Dual specificity protein phosphatase PHS1", "gene_name": "PHS1", "organism": "Arabidopsis", "refseq_name": "dual specificity protein phosphatase family protein", "refseq_ac": [ { "id": "NP_197761", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197761", "type": "external" } ], "gene_names_uniprotkb": "PHS1; MQM1.1; MQM1_1; PROPYZAMIDE-HYPERSENSITIVE 1", "gene_names_refseq": "MQM1.1; MQM1_1; PHS1; PROPYZAMIDE-HYPERSENSITIVE 1", "protein_names_uniprotkb": "Dual specificity protein phosphatase PHS1; 3.1.3.16; 3.1.3.48; Protein PROPYZAMIDE-HYPERSENSITIVE 1", "protein_names_refseq": "dual specificity protein phosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23720)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10718197;11130714;15208393;16889651;19392697;20224945;22060019;23111157;23328941;23776212;25561503;27862469;28011693;30833711;9330910", "class_list": "", "function": "Probable dual specificity phosphatase that binds and dephosphorylates MPK18, modulating the organization and dynamics of cortical microtubules. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination and light-induced stomata aperture., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KE97;Q9FFA8", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "1.20.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.1", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0004721 phosphoprotein phosphatase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0010468 regulation of gene expression;GO:0043622 cortical microtubule organization;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway;GO:0010119 regulation of stomatal movement", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q75QN6-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O04203-1", "uniprot_id": [ { "id": "HSPR2_ARATH", "url": "https://www.uniprot.org/uniprot/O04203", "type": "external" } ], "mass": 49244.0, "length": 435, "protein_name": "Nematode resistance protein-like HSPRO2", "gene_name": "HSPRO2", "organism": "Arabidopsis", "refseq_name": "ortholog of sugar beet HS1 PRO-1 2", "refseq_ac": [ { "id": "NP_181529", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181529", "type": "external" } ], "gene_names_uniprotkb": "HSPRO2; T28M21.16", "gene_names_refseq": "ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2; ATHSPRO2; HSPRO2; T28M21.16; T28M21_16; ortholog of sugar beet HS1 PRO-1 2", "protein_names_uniprotkb": "Nematode resistance protein-like HSPRO2; AKINbetagamma-interacting protein 2; Ortholog of sugar beet HS1 PRO-1 protein 2; Protein Hs1pro-2", "protein_names_refseq": "ortholog of sugar beet HS1 PRO-1 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40000)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;14593172;15085136;17028154;17977154;23111157;23572148;25561503;27862469;28011693;29654922", "class_list": "", "function": "Positive regulator of basal resistance., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8GUL9;Q8LB61", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0019441 L-tryptophan catabolic process to kynurenine;GO:0071456 cellular response to hypoxia;GO:0042742 defense response to bacterium;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "O04203-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O22971-1", "uniprot_id": [ { "id": "CIPKD_ARATH", "url": "https://www.uniprot.org/uniprot/O22971", "type": "external" } ], "mass": 56731.0, "length": 502, "protein_name": "CBL-interacting serine/threonine-protein kinase 13", "gene_name": "CIPK13", "organism": "Arabidopsis", "refseq_name": "CBL-interacting protein kinase 13", "refseq_ac": [ { "id": "NP_180965", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180965", "type": "external" } ], "gene_names_uniprotkb": "CIPK13; F13P17.2; PKS10; SnRK3.7", "gene_names_refseq": "ATWL2; CBL-interacting protein kinase 13; CIPK13; F13P17.2; F13P17_2; SNF1-RELATED PROTEIN KINASE 3.7; SnRK3.7; WL2; WPL4-LIKE 2", "protein_names_uniprotkb": "CBL-interacting serine/threonine-protein kinase 13; 2.7.11.1; SNF1-related kinase 3.7; SOS2-like protein kinase PKS10", "protein_names_refseq": "CBL-interacting protein kinase 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34180)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;11230129;12805596;27862469", "class_list": "", "function": "CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0061891 calcium ion sensor activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0019722 calcium-mediated signaling;GO:0048768 root hair cell tip growth", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "O22971-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O49675-1", "uniprot_id": [ { "id": "CCD4_ARATH", "url": "https://www.uniprot.org/uniprot/O49675", "type": "external" } ], "mass": 65602.0, "length": 595, "protein_name": "Probable carotenoid cleavage dioxygenase 4, chloroplastic", "gene_name": "CCD4", "organism": "Arabidopsis", "refseq_name": "nine-cis-epoxycarotenoid dioxygenase 4", "refseq_ac": [ { "id": "NP_193652", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193652", "type": "external" } ], "gene_names_uniprotkb": "CCD4; NCED4; T18B16.140", "gene_names_refseq": "CCD4; NCED4; T18B16.140; T18B16_140; carotenoid cleavage dioxygenase 4; nine-cis-epoxycarotenoid dioxygenase 4", "protein_names_uniprotkb": "Probable carotenoid cleavage dioxygenase 4, chloroplastic; 1.14.99.-; AtCCD4; AtNCED4", "protein_names_refseq": "nine-cis-epoxycarotenoid dioxygenase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19170)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11532178;14593172;15340011;16461379;22274653;27862469;27895226;28534654", "class_list": "", "function": "May be involved in carotenoid cleavage., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0010436 carotenoid dioxygenase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0010287 plastoglobule", "go_biological_process": "GO:0016121 carotene catabolic process;GO:1901811 beta-carotene catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "O49675-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O64688-1", "uniprot_id": [ { "id": "ODPB3_ARATH", "url": "https://www.uniprot.org/uniprot/O64688", "type": "external" } ], "mass": 44015.0, "length": 406, "protein_name": "Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic", "gene_name": "E1-BETA-2", "organism": "Arabidopsis", "refseq_name": "Transketolase family protein", "refseq_ac": [ { "id": "NP_181006", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181006", "type": "external" } ], "gene_names_uniprotkb": "E1-BETA-2; T31E10.7", "gene_names_refseq": "", "protein_names_uniprotkb": "Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic; 1.2.4.1", "protein_names_refseq": "Transketolase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34590)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617197;27862469", "class_list": "", "function": "The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAI3", "ec_number_list": [ { "id": "1.2.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.4.1", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0009507 chloroplast;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006086 pyruvate decarboxylation to acetyl-CoA;GO:0048868 pollen tube development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "O64688-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O65421-1", "uniprot_id": [ { "id": "VP281_ARATH", "url": "https://www.uniprot.org/uniprot/O65421", "type": "external" } ], "mass": 23494.0, "length": 209, "protein_name": "Vacuolar protein sorting-associated protein 28 homolog 1", "gene_name": "VPS28-1", "organism": "Arabidopsis", "refseq_name": "vacuolar protein sorting-associated protein-like protein", "refseq_ac": [ { "id": "NP_001320024", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320024", "type": "external" } ], "gene_names_uniprotkb": "VPS28-1; F17L22.20; F18E5.180", "gene_names_refseq": "F17L22.20; VPS28-1; VPS28; vacuolar protein sorting 28; vacuolar protein sorting-associated protein 28 homolog 1", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 28 homolog 1", "protein_names_refseq": "vacuolar protein sorting-associated protein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21560)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;16488176;17090720;27862469", "class_list": "", "function": "Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs). Mediates the association to the ESCRT-0 complex (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0044877 protein-containing complex binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005802 trans-Golgi network;GO:0000813 ESCRT I complex", "go_biological_process": "GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O65421-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O80959-1", "uniprot_id": [ { "id": "PLP6_ARATH", "url": "https://www.uniprot.org/uniprot/O80959", "type": "external" } ], "mass": 54495.0, "length": 499, "protein_name": "Patatin-like protein 6", "gene_name": "PLP6", "organism": "Arabidopsis", "refseq_name": "PATATIN-like protein 6", "refseq_ac": [ { "id": "NP_181455", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181455", "type": "external" } ], "gene_names_uniprotkb": "PLP6; T16B24.14", "gene_names_refseq": "PATATIN-like protein 6; PLA IIB; PLP6; T16B24.14; T16B24_14", "protein_names_uniprotkb": "Patatin-like protein 6; 3.1.1.-; AtPLAIIB; AtPLP6; Patatin-related phospholipase A IIIalpha; Phospholipase A IIB; pPLAIIIa", "protein_names_refseq": "PATATIN-like protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39220)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;14593172;21447788;27862469", "class_list": "", "function": "Possesses non-specific lipolytic acyl hydrolase (LAH) activity. Hydrolyzes phospholipids as well as galactolipids. May play a role in disease resistance (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016298 lipase activity;GO:0016787 hydrolase activity;GO:0004620 phospholipase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006952 defense response;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "O80959-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O81057-1", "uniprot_id": [ { "id": "ASK14_ARATH", "url": "https://www.uniprot.org/uniprot/O81057", "type": "external" } ], "mass": 17102.0, "length": 149, "protein_name": "SKP1-like protein 14", "gene_name": "ASK14", "organism": "Arabidopsis", "refseq_name": "SKP1-like 14", "refseq_ac": [ { "id": "NP_565296", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565296", "type": "external" } ], "gene_names_uniprotkb": "ASK14; T18E12.16", "gene_names_refseq": "ASK14; SK14; SKP1-like 14; T18E12.16; T18E12_16", "protein_names_uniprotkb": "SKP1-like protein 14; AtSK14", "protein_names_refseq": "SKP1-like 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G03170)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;12970487;14749489;19682297;27862469", "class_list": "", "function": "Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0097602 cullin family protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O81057-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O81316-1", "uniprot_id": [ { "id": "SCL6_ARATH", "url": "https://www.uniprot.org/uniprot/O81316", "type": "external" } ], "mass": 61168.0, "length": 558, "protein_name": "Scarecrow-like protein 6", "gene_name": "SCL6", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "SCL6; 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ASL19; F6N15.4", "gene_names_refseq": "F6N15.4; F6N15_4; JAGGED LATERAL ORGANS; JLO; LBD30; LOB DOMAIN-CONTAINING PROTEIN 30", "protein_names_uniprotkb": "LOB domain-containing protein 30; AS2-like protein 19; ASYMMETRIC LEAVES 2-like protein 19", "protein_names_refseq": "Lateral organ boundaries (LOB) domain family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00220)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12040093;12068116;17147637;19088331;19154202;27862469", "class_list": "", "function": "Involved in the positive regulation of tracheary element (TE) differentiation. Involved in a positive feedback loop that maintains or promotes NAC030/VND7 expression that regulates TE differentiation-related genes., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MF43;B7XG73;Q1PED1", "ec_number_list": [], "go_molecular_function": "GO:0001216 DNA-binding transcription activator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045893 positive regulation of DNA-templated transcription;GO:0009755 hormone-mediated signaling pathway;GO:0010089 xylem development;GO:0010199 organ boundary specification between lateral organs and the meristem", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "O81323-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O81793-1", "uniprot_id": [ { "id": "O81793_ARATH", "url": "https://www.uniprot.org/uniprot/O81793", "type": "external" } ], "mass": 28510.0, "length": 271, "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "F8D20.120; F8D20_120", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F8D20.120; F8D20_120", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger (C2H2 type) family protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35610)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617198;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0003729 mRNA binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "O81793-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O81801-1", "uniprot_id": [ { "id": "O81801_ARATH", "url": "https://www.uniprot.org/uniprot/O81801", "type": "external" } ], "mass": 28688.0, "length": 275, "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "DAZ3", "organism": "Arabidopsis", "refseq_name": "zinc finger (C2H2 type) family protein", "refseq_ac": [ { "id": "NP_195295", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195295", "type": "external" } ], "gene_names_uniprotkb": "DAZ3; 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MQD19_18", "protein_names_uniprotkb": "Putative pentatricopeptide repeat-containing protein At5g43820", "protein_names_refseq": "Pentatricopeptide repeat (PPR) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G43820)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15269332;27862469", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FG82", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "P0C8R0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P27202-1", "uniprot_id": [ { "id": "PSBR_ARATH", "url": "https://www.uniprot.org/uniprot/P27202", "type": "external" } ], "mass": 14586.0, "length": 140, "protein_name": "Photosystem II 10 kDa polypeptide, chloroplastic", "gene_name": "PSBR", "organism": "Arabidopsis", "refseq_name": "photosystem II subunit R", "refseq_ac": [ { "id": "NP_178025", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178025", "type": "external" } ], "gene_names_uniprotkb": "PSBR; 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CYCD1; F20P5.7", "gene_names_refseq": "1; ATCYCD1; CYCD1; CYCLIN D1; F20P5.7; F20P5_7", "protein_names_uniprotkb": "Cyclin-D1-1; 1; CycD1; Cyclin-d1; Cyclin-delta-1; G1/S-specific cyclin-D1-1", "protein_names_refseq": "1; CYCLIN D1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G70210)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10100639;11130712;11910074;14593172;15208425;15464981;16227434;27862469;7696881", "class_list": "", "function": "May activate cell cycle in the root apical meristem (RAM) and promote embryonic root (radicle) protrusion., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04525;Q8W2K2", "ec_number_list": [], "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0051301 cell division;GO:0000082 G1/S transition of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P42751-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P68350-1", "uniprot_id": [ { "id": "DOF15_ARATH", "url": "https://www.uniprot.org/uniprot/P68350", "type": "external" } ], "mass": 19423.0, "length": 175, "protein_name": "Dof zinc finger protein DOF1.5", "gene_name": "DOF1.5", "organism": "Arabidopsis", "refseq_name": "Dof-type zinc finger DNA-binding family protein", "refseq_ac": [ { "id": "NP_174211", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174211", "type": "external" } ], "gene_names_uniprotkb": "DOF1.5; COG1; F28N24.35", "gene_names_refseq": "F28N24.35", "protein_names_uniprotkb": "Dof zinc finger protein DOF1.5; AtDOF1.5", "protein_names_refseq": "Dof-type zinc finger DNA-binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G29160)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12475498;12694592;19619493;27862469", "class_list": "", "function": "Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Acts as a negative regulator in the phytochrome-mediated light responses. Controls phyB-mediated end-of-day response and the phyA-mediated anthocyanin accumulation. Not involved in direct flowering time regulation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2RVJ9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010214 seed coat development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P68350-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93032-1", "uniprot_id": [ { "id": "IDH2_ARATH", "url": "https://www.uniprot.org/uniprot/P93032", "type": "external" } ], "mass": 39590.0, "length": 367, "protein_name": "Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial", "gene_name": "IDH2", "organism": "Arabidopsis", "refseq_name": "isocitrate dehydrogenase subunit 2", "refseq_ac": [ { "id": "NP_179304", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179304", "type": "external" } ], "gene_names_uniprotkb": "IDH2; F6P23.14", "gene_names_refseq": "F6P23.14; F6P23_14; IDH-II; IDH2; NAD+ DEPENDENT ISOCITRATE DEHYDROGENASE SUBUNIT 2; isocitrate dehydrogenase II; isocitrate dehydrogenase subunit 2", "protein_names_uniprotkb": "Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial; IDH-II; Isocitric dehydrogenase 2; NAD(+)-specific ICDH 2", "protein_names_refseq": "isocitrate dehydrogenase subunit 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17130)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14671022;16527867;27862469;9526501", "class_list": "", "function": "Performs an essential role in the oxidative function of the citric acid cycle., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XJT6", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004449 isocitrate dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0006102 isocitrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P93032-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q04996-1", "uniprot_id": [ { "id": "HAT31_ARATH", "url": "https://www.uniprot.org/uniprot/Q04996", "type": "external" } ], "mass": 80461.0, "length": 723, "protein_name": "Homeobox protein HAT3.1", "gene_name": "HAT3.1", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein", "refseq_ac": [ { "id": "NP_001326497", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326497", "type": "external" } ], "gene_names_uniprotkb": "HAT3.1; MLD14.25; MLD14.37", "gene_names_refseq": "HAT3.1", "protein_names_uniprotkb": "Homeobox protein HAT3.1", "protein_names_refseq": "Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19510)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10819329;11910074;14593172;18463617;20466843;23328941;23776212;25561503;27862469;30833711;8106082", "class_list": "", "function": "Binds only to large DNA fragments. Recognizes a DNA fragment carrying 8 copies of box7 motif of the light-induced cab-E promoter of Nicotiana plumbaginifolia. Also recognizes the box7m1 motif., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GZA9;Q9LT66", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0045814 negative regulation of gene expression, epigenetic", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q04996-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38885-1", "uniprot_id": [ { "id": "SCY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38885", "type": "external" } ], "mass": 59492.0, "length": 551, "protein_name": "Preprotein translocase subunit SCY1, chloroplastic", "gene_name": "SCY1", "organism": "Arabidopsis", "refseq_name": "SECY homolog 1", "refseq_ac": [ { "id": "NP_179461", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179461", "type": "external" } ], "gene_names_uniprotkb": "SCY1; MSF3.9; SECY", "gene_names_refseq": "SCY1; SECY homolog 1", "protein_names_uniprotkb": "Preprotein translocase subunit SCY1, chloroplastic; CpSecY", "protein_names_refseq": "SECY homolog 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G18710)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10207046;10617197;12217076;14593172;15988575;21051552;27862469;7629062", "class_list": "", "function": "Involved in protein export. Probably interacts with other proteins to allow the translocation of proteins across the chloroplast thylakoid membranes. Required for normal greening during embryogenesis. Central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SLG1", "ec_number_list": [], "go_molecular_function": "GO:0005048 signal sequence binding;GO:0008320 protein transmembrane transporter activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation;GO:0010027 thylakoid membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q38885-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5S1W2-1", "uniprot_id": [ { "id": "BON2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5S1W2", "type": "external" } ], "mass": 64033.0, "length": 586, "protein_name": "Protein BONZAI 2", "gene_name": "BON2", "organism": "Arabidopsis", "refseq_name": "Calcium-dependent phospholipid-binding Copine family protein", "refseq_ac": [ { "id": "NP_568180", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568180", "type": "external" } ], "gene_names_uniprotkb": "BON2; T2I1.10", "gene_names_refseq": "BON2; BONZAI 2; T2I1.10; T2I1_10", "protein_names_uniprotkb": "Protein BONZAI 2", "protein_names_refseq": "Calcium-dependent phospholipid-binding Copine family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G07300)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;14593172;16367962;17631528;23572148;25561503;27862469", "class_list": "", "function": "Negative regulator of cell death and defense responses. May repress a number of R genes and may have effects in promoting growth and development. May function in membrane trafficking and in fusion of vesicles with plasma membrane (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94EW4;Q9LY30", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0005544 calcium-dependent phospholipid binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0006952 defense response;GO:0071277 cellular response to calcium ion", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q5S1W2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XVH0-1", "uniprot_id": [ { "id": "BH109_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XVH0", "type": "external" } ], "mass": 21674.0, "length": 185, "protein_name": "Transcription factor bHLH109", "gene_name": "BHLH109", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_001031251", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031251", "type": "external" } ], "gene_names_uniprotkb": "BHLH109; T22E19.13", "gene_names_refseq": "T22E19.13; T22E19_13", "protein_names_uniprotkb": "Transcription factor bHLH109; AtbHLH109; Basic helix-loop-helix protein 109; bHLH 109; bHLH transcription factor bHLH109", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G68240)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12481096;12679534;23874927;26973252;27862469", "class_list": "", "function": "Transcription factor involved in somatic embryogenesis. Acts as a positive regulator of somatic embryo formation (PubMed:23874927, PubMed:26973252). Acts as a positive regulator of ECP63 by targeting its promoter and inducing its expression (PubMed:26973252)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5XVH1;Q7XHI8;Q9C9F9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010262 somatic embryogenesis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5XVH0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q70DU8-1", "uniprot_id": [ { "id": "AL3H1_ARATH", "url": "https://www.uniprot.org/uniprot/Q70DU8", "type": "external" } ], "mass": 53159.0, "length": 484, "protein_name": "Aldehyde dehydrogenase family 3 member H1", "gene_name": "ALDH3H1", "organism": "Arabidopsis", "refseq_name": "aldehyde dehydrogenase 3H1", "refseq_ac": [ { "id": "NP_001077676", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077676", "type": "external" } ], "gene_names_uniprotkb": "ALDH3H1; ALDH4; T7O23.15", "gene_names_refseq": "ALDH3H1; ALDH4; T7O23.15; T7O23_15; aldehyde dehydrogenase 3H1; aldehyde dehydrogenase 4", "protein_names_uniprotkb": "Aldehyde dehydrogenase family 3 member H1; 1.2.1.3; AtALDH4; Ath-ALDH4", "protein_names_refseq": "aldehyde dehydrogenase 3H1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G44170)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11849595;14593172;15358267;15830124;21166653;22442412;23820729;24463048;27862469", "class_list": "", "function": "Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation. Medium- to long-chain saturated aldehydes are preferred substrates, while the short-chain aldehyde propanal is a weak substrate. Is strictely NAD(+) specific., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQF0;Q8LFT7;Q9C6Y7", "ec_number_list": [ { "id": "1.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0004028 3-chloroallyl aldehyde dehydrogenase activity;GO:0004029 aldehyde dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0006081 aldehyde metabolic process;GO:0009651 response to salt stress;GO:0009269 response to desiccation;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q70DU8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q71DJ5-1", "uniprot_id": [ { "id": "LIP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q71DJ5", "type": "external" } ], "mass": 44231.0, "length": 393, "protein_name": "Triacylglycerol lipase 1", "gene_name": "LIP1", "organism": "Arabidopsis", "refseq_name": "lipase 1", "refseq_ac": [ { "id": "NP_179126", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179126", "type": "external" } ], "gene_names_uniprotkb": "LIP1; F15A23.3", "gene_names_refseq": "ATLIP1; F15A23.3; F15A23_3; LIP1; lipase 1", "protein_names_uniprotkb": "Triacylglycerol lipase 1; 3.1.1.3", "protein_names_refseq": "lipase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G15230)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;16226259;23505340;24989044;27862469", "class_list": "", "function": "Triacylglycerol (TAG) lipase active on triolein, trioctanoin, tributyrin and 1,3-Diolein, but not on phospho- and galactolipids (PubMed:16226259). Involved but dispensable for TAG storage breakdown during seed germination (PubMed:16226259, PubMed:24989044)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q1H5B7;Q9SKL5", "ec_number_list": [ { "id": "3.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.-", "type": "external" }, { "id": "3.1.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.3", "type": "external" } ], "go_molecular_function": "GO:0016298 lipase activity;GO:0004806 triacylglycerol lipase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0016042 lipid catabolic process;GO:0046486 glycerolipid metabolic process;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009739 response to gibberellin", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q71DJ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q76FS5-1", "uniprot_id": [ { "id": "SPS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q76FS5", "type": "external" } ], "mass": 46045.0, "length": 417, "protein_name": "Solanesyl diphosphate synthase 2, chloroplastic", "gene_name": "SPS2", "organism": "Arabidopsis", "refseq_name": "solanesyl diphosphate synthase 2", "refseq_ac": [ { "id": "NP_173148", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173148", "type": "external" } ], "gene_names_uniprotkb": "SPS2; F20D23.25; SPPS", "gene_names_refseq": "AtSPS2; F20D23.25; F20D23_25; SPS2; solanesyl diphosphate synthase 2", "protein_names_uniprotkb": "Solanesyl diphosphate synthase 2, chloroplastic; 2.5.1.85; All-trans-nonaprenyl-diphosphate synthase 2 (geranylgeranyl-diphosphate specific); AtSPS2", "protein_names_refseq": "solanesyl diphosphate synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17050)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;15653808;15784989;23913686;26039552;26432861;27862469", "class_list": "", "function": "Involved in providing solanesyl diphosphate for plastoquinone-9 (PQ-9) formation in plastids (Probable) (PubMed:15784989, PubMed:23913686). Catalyzes the elongation of the prenyl side chain of PQ-9 in plastids (PubMed:23913686). Contributes to the biosynthesis of plastochromanol-8 (PC-8) in plastids (PubMed:23913686). Does not contribute to the synthesis of tocopherol or ubiquinone (PubMed:23913686). PQ-9 and PC-8 are lipophilic antioxidants that act as protectant against photooxidative stress under high light stress conditions (PubMed:23913686). Prefers geranylgeranyl diphosphate to farnesyl diphosphate as substrate (PubMed:15784989). No activity with geranyl diphosphate or dimethylallyl diphosphate as substrate (PubMed:15784989)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84LG1;Q9SHG4", "ec_number_list": [ { "id": "2.5.1.85", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.85", "type": "external" }, { "id": "2.5.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.29", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004659 prenyltransferase activity;GO:0052924 all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0008299 isoprenoid biosynthetic process;GO:0010236 plastoquinone biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q76FS5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7DLR9-1", "uniprot_id": [ { "id": "PSB4_ARATH", "url": "https://www.uniprot.org/uniprot/Q7DLR9", "type": "external" } ], "mass": 27651.0, "length": 246, "protein_name": "Proteasome subunit beta type-4", "gene_name": "PBG1", "organism": "Arabidopsis", "refseq_name": "20S proteasome beta subunit G1", "refseq_ac": [ { "id": "NP_176040", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176040", "type": "external" } ], "gene_names_uniprotkb": "PBG1; F13N6.3; PRCH", "gene_names_refseq": "20S proteasome beta subunit G1; F13N6.3; F13N6_3; PBG1; PROTEASOME BETA SUBUNIT PBG1", "protein_names_uniprotkb": "Proteasome subunit beta type-4; 20S proteasome beta subunit G-1; Proteasome component H; Proteasome subunit beta type-7", "protein_names_refseq": "20S proteasome beta subunit G1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56450)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10363660;11130712;14593172;14623884;20516081;23111157;23328941;27862469;30833711;9373170;9611183", "class_list": "", "function": "Non-catalytic component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23718;Q9C7X3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0019774 proteasome core complex, beta-subunit complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0022626 cytosolic ribosome", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q7DLR9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7DM58-1", "uniprot_id": [ { "id": "AB4C_ARATH", "url": "https://www.uniprot.org/uniprot/Q7DM58", "type": "external" } ], "mass": 169080.0, "length": 1516, "protein_name": "ABC transporter C family member 4", "gene_name": "ABCC4", "organism": "Arabidopsis", "refseq_name": "multidrug resistance-associated protein 4", "refseq_ac": [ { "id": "NP_182301", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182301", "type": "external" } ], "gene_names_uniprotkb": "ABCC4; EST3; F17A22.19; MRP4", "gene_names_refseq": "ABCC4; ATMRP4; ATP-binding cassette C4; EST3; F17A22.19; MRP4; multidrug resistance-associated protein 4", "protein_names_uniprotkb": "ABC transporter C family member 4; 7.6.2.2; ABC transporter ABCC.4; ATP-energized glutathione S-conjugate pump 4; AtABCC4; Glutathione S-conjugate-transporting ATPase 4; Multidrug resistance-associated protein 4", "protein_names_refseq": "multidrug resistance-associated protein 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47800)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617197;11346655;11855639;12430019;15225287;17151019;18299247;18463617;20374526;20466843;22060019;23572148;25561503;26187819;27862469;29654922;30833711;9271206;9671034", "class_list": "", "function": "Involved in the regulation of stomatal aperture. May function as a high-capacity pump for folates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O24525;Q0WVT4", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0008559 ABC-type xenobiotic transporter activity;GO:0016887 ATP hydrolysis activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005774 vacuolar membrane;GO:0005773 vacuole", "go_biological_process": "GO:0055085 transmembrane transport;GO:0009611 response to wounding;GO:0009414 response to water deprivation;GO:0009624 response to nematode;GO:0010118 stomatal movement", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q7DM58-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7DMA9-1", "uniprot_id": [ { "id": "PAS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7DMA9", "type": "external" } ], "mass": 71797.0, "length": 635, "protein_name": "Peptidyl-prolyl cis-trans isomerase PASTICCINO1", "gene_name": "PAS1", "organism": "Arabidopsis", "refseq_name": "FKBP-type peptidyl-prolyl cis-trans isomerase family protein", "refseq_ac": [ { "id": "NP_566993", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566993", "type": "external" } ], "gene_names_uniprotkb": "PAS1; DEI1; F5K20.310; FKBP70; FKBP72", "gene_names_refseq": "DEI1; PAS1; PASTICCINO 1", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase PASTICCINO1; 5.2.1.8; 70 kDa peptidyl-prolyl isomerase; AtFKBP72; FK506-binding protein 72; Immunophilin FKBP72; PPIase FKBP72; Peptidyl-prolyl cis-trans isomerase FKBP72; Rotamase", "protein_names_refseq": "FKBP-type peptidyl-prolyl cis-trans isomerase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54010)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;12857804;14593172;15047905;15133126;16803883;20145257;27862469;9449673;9566922", "class_list": "", "function": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Essential protein regulating cell division, adhesion and elongation throughout the plant development and embryogenesis. Required for the spatial organization of apical meristems. Involved in the hormonal control of cell division and differentiation mediated by cytokinins and auxin. Regulates the function of NAC089 transcription factor by controlling its targeting to the nucleus upon plant cell division. Interacts with enzymes of the fatty acid elongase complex and favors the generation of very-long-chain fatty acids (VLCFAs) required for polar auxin transport and tissue patterning during plant development., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64403;Q93ZT7;Q9M326", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0030154 cell differentiation;GO:0006457 protein folding;GO:0030010 establishment of cell polarity;GO:0009880 embryonic pattern specification;GO:0009826 unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q7DMA9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7FK82-1", "uniprot_id": [ { "id": "LRK12_ARATH", "url": "https://www.uniprot.org/uniprot/Q7FK82", "type": "external" } ], "mass": 73887.0, "length": 669, "protein_name": "Probable L-type lectin-domain containing receptor kinase I.2", "gene_name": "LECRK12", "organism": "Arabidopsis", "refseq_name": "LOW protein: L-type lectin-domain receptor kinase-like protein", "refseq_ac": [ { "id": "NP_001319689", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319689", "type": "external" } ], "gene_names_uniprotkb": "LECRK12; F18N11.150", "gene_names_refseq": "L-type lectin receptor kinase I.2; LecRK-I.2", "protein_names_uniprotkb": "Probable L-type lectin-domain containing receptor kinase I.2; 2.7.11.1; LecRK-I.2", "protein_names_refseq": "LOW protein: L-type lectin-domain receptor kinase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G45390)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;19773388;25083911;27862469", "class_list": "", "function": "Involved in resistance response to the pathogenic fungus Alternaria brassicicola., [UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "F4J5K3", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0030246 carbohydrate binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0002229 defense response to oomycetes", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q7FK82-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7G191-1", "uniprot_id": [ { "id": "ALDO4_ARATH", "url": "https://www.uniprot.org/uniprot/Q7G191", "type": "external" } ], "mass": 147304.0, "length": 1337, "protein_name": "Aldehyde oxidase 4", "gene_name": "AAO4", "organism": "Arabidopsis", "refseq_name": "aldehyde oxidase 4", "refseq_ac": [ { "id": "NP_563711", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563711", "type": "external" } ], "gene_names_uniprotkb": "AAO4; AO2; T1G11.17", "gene_names_refseq": "AAO4; ALDEHYDE OXIDASE 2; ALDEHYDE OXIDASE 4; AO4; ATAO-4; ATAO2; T1G11.17; T1G11_17; aldehyde oxidase 4; arabdopsis thaliana aldehyde oxidase 4", "protein_names_uniprotkb": "Aldehyde oxidase 4; 1.2.3.1; 1.2.3.7; AO-4; AtAO-4; AtAO2; Benzaldehyde oxidase; IAA oxidase; Indole-3-acetaldehyde oxidase", "protein_names_refseq": "aldehyde oxidase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04580)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10972874;11130712;15574845;19297586;23820729;27862469;28188272;9655945", "class_list": "", "function": "Aldehyde oxidase with a broad substrate specificity (PubMed:28188272). Involved in the accumulation of benzoic acid (BA) in siliques (PubMed:19297586). Delays and protects siliques from senescence by catalyzing aldehyde detoxification in siliques. Catalyzes the oxidation of an array of aromatic and aliphatic aldehydes, including vanillin and the reactive carbonyl species (RCS) acrolein, 4-hydroxyl-2-nonenal (HNE), and malondialdehyde (MDA) (PubMed:28188272)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23027;O49157;Q7GB29", "ec_number_list": [ { "id": "1.2.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.1", "type": "external" }, { "id": "1.2.3.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.7", "type": "external" }, { "id": "1.2.3.14", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.14", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0071949 FAD binding;GO:0004031 aldehyde oxidase activity;GO:0018479 benzaldehyde dehydrogenase (NAD+) activity;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0042542 response to hydrogen peroxide;GO:0009414 response to water deprivation;GO:0009688 abscisic acid biosynthetic process;GO:0009851 auxin biosynthetic process;GO:0019760 glucosinolate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q7G191-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7G192-1", "uniprot_id": [ { "id": "ALDO2_ARATH", "url": "https://www.uniprot.org/uniprot/Q7G192", "type": "external" } ], "mass": 144580.0, "length": 1321, "protein_name": "Indole-3-acetaldehyde oxidase", "gene_name": "AAO2", "organism": "Arabidopsis", "refseq_name": "aldehyde oxidase 2", "refseq_ac": [ { "id": "NP_189946", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189946", "type": "external" } ], "gene_names_uniprotkb": "AAO2; AO3; F22J12.40", "gene_names_refseq": "AAO2; ALDEHYDE OXIDASE 2; AO3; AOgamma; Aldehyde oxidase gamma; Arabidopsis thaliana aldehyde oxidase 2; Arabidopsis thaliana aldehyde oxidase 3; AtAO3; aldehyde oxidase 2; aldehyde oxidase 3; atAO-2", "protein_names_uniprotkb": "Indole-3-acetaldehyde oxidase; 1.2.3.7; AO-2; Aldehyde oxidase 2; AtAO-2; AtAO3; IAA oxidase", "protein_names_refseq": "aldehyde oxidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G43600)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10423535;10739959;10972874;11130713;15064376;15574845;27862469;9489015;9615466;9655945", "class_list": "", "function": "In higher plant aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. In vitro, AO-gamma uses heptaldehyde, benzaldehyde, naphthaldehyde and cinnamaldehyde as substrates; AO-beta uses indole-3-acetaldehyde (IAAld), indole-3-aldehyde (IAld) and naphtaldehyde; the AAO2-AAO3 dimer uses abscisic aldehyde., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49156;O64418", "ec_number_list": [ { "id": "1.2.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.1", "type": "external" }, { "id": "1.2.3.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.7", "type": "external" }, { "id": "1.2.3.14", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.14", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0071949 FAD binding;GO:0004031 aldehyde oxidase activity;GO:0051537 2 iron, 2 sulfur cluster binding;GO:0050302 indole-3-acetaldehyde oxidase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0009688 abscisic acid biosynthetic process;GO:0009851 auxin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q7G192-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7G193-1", "uniprot_id": [ { "id": "ALDO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7G193", "type": "external" } ], "mass": 149554.0, "length": 1368, "protein_name": "Indole-3-acetaldehyde oxidase", "gene_name": "AAO1", "organism": "Arabidopsis", "refseq_name": "aldehyde oxidase 1", "refseq_ac": [ { "id": "NP_568407", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568407", "type": "external" } ], "gene_names_uniprotkb": "AAO1; AO1; F22D1.130", "gene_names_refseq": "AAO1; ALDEHYDE OXIDASE; AO1; AOalpha; ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1; AT-AO1; ATAO; Arabidopsis thaliana aldehyde oxidase 1; AtAO1; F22D1.130; F22D1_130; aldehyde oxidase 1; aldehyde oxidase alpha", "protein_names_uniprotkb": "Indole-3-acetaldehyde oxidase; 1.2.3.7; AO-1; Aldehyde oxidase 1; AtAO-1; AtAO1; IAA oxidase", "protein_names_refseq": "aldehyde oxidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20960)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10423535;10739959;10972874;11130714;15574845;23111157;27862469;9489015;9615466;9655945", "class_list": "", "function": "In higher plants aldehyde oxidases (AO) appear to be homo- and heterodimeric assemblies of AO subunits with probably different physiological functions. AO-alpha may be involved in the biosynthesis of auxin, and in biosynthesis of abscisic acid (ABA) in seeds. In vitro, AO-alpha uses heptaldehyde, protocatechualdehyde, benzaldehyde, indole-3-aldehyde (IAld), indole-3-acetaldehyde (IAAld), cinnamaldehyde and citral as substrates; AO-beta uses IAAld, IAld and naphtaldehyde as substrates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49155;O64417", "ec_number_list": [ { "id": "1.2.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.1", "type": "external" }, { "id": "1.2.3.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.7", "type": "external" }, { "id": "1.2.3.14", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.3.14", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0071949 FAD binding;GO:0004031 aldehyde oxidase activity;GO:0051537 2 iron, 2 sulfur cluster binding;GO:0050302 indole-3-acetaldehyde oxidase activity", "go_cellular_component": "GO:0009536 plastid", "go_biological_process": "GO:0009688 abscisic acid biosynthetic process;GO:0009851 auxin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q7G193-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7G1L2-1", "uniprot_id": [ { "id": "RAP26_ARATH", "url": "https://www.uniprot.org/uniprot/Q7G1L2", "type": "external" } ], "mass": 21963.0, "length": 192, "protein_name": "Ethylene-responsive transcription factor RAP2-6", "gene_name": "RAP2-6", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_175008", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175008", "type": "external" } ], "gene_names_uniprotkb": "RAP2-6; ERF108; F1I21.18", "gene_names_refseq": "F1I21.18; F1I21_18; RAP2.6; related to AP2 6", "protein_names_uniprotkb": "Ethylene-responsive transcription factor RAP2-6; Protein RELATED TO APETALA2 6", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G43160)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;14756769;16407444;17786451;20193749;21069430;23510309;27862469;9192694", "class_list": "", "function": "Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Binds to the GCC-box pathogenesis-related promoter element and the cis-element CE1 (coupling element 1). Involved in the regulation of gene expression in response to abiotic stresses, possibly through the abscisic acid (ABA) signaling pathway (PubMed:20193749). Involved in resistance to the beet cyst nematode Heterodera schachtii in roots. May promote callose deposition at syncytia which may interfere with nutrient import into syncytia and inhibit the development of nematodes (PubMed:23510309)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23108", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0034605 cellular response to heat", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q7G1L2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7G8V2-1", "uniprot_id": [ { "id": "ARR15_ARATH", "url": "https://www.uniprot.org/uniprot/Q7G8V2", "type": "external" } ], "mass": 22401.0, "length": 206, "protein_name": "Two-component response regulator ARR15", "gene_name": "ARR15", "organism": "Arabidopsis", "refseq_name": "response regulator 15", "refseq_ac": [ { "id": "NP_177627", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177627", "type": "external" } ], "gene_names_uniprotkb": "ARR15; F25A4.14; F9E10.26", "gene_names_refseq": "ARR15; F25A4.14; F25A4_14; RESPONSE REGULATOR 15; response regulator 15", "protein_names_uniprotkb": "Two-component response regulator ARR15", "protein_names_refseq": "response regulator 15", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G74890)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11115887;11130712;12354925;12941880;14973166;27862469", "class_list": "", "function": "Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Type-A response regulators seem to act as negative regulators of the cytokinin signaling., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000156 phosphorelay response regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009736 cytokinin-activated signaling pathway;GO:0009735 response to cytokinin", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q7G8V2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7PC88-1", "uniprot_id": [ { "id": "AB31G_ARATH", "url": "https://www.uniprot.org/uniprot/Q7PC88", "type": "external" } ], "mass": 159872.0, "length": 1426, "protein_name": "ABC transporter G family member 31", "gene_name": "ABCG31", "organism": "Arabidopsis", "refseq_name": "pleiotropic drug resistance 3", "refseq_ac": [ { "id": "NP_180555", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180555", "type": "external" } ], "gene_names_uniprotkb": "ABCG31; F23F1.14; PDR3", "gene_names_refseq": "ABCG31; ATP-binding cassette G31; ATPDR3; F23F1.14; F23F1_14; PDR3; PLEIOTROPIC DRUG RESISTANCE 3; pleiotropic drug resistance 3", "protein_names_uniprotkb": "ABC transporter G family member 31; ABC transporter ABCG.31; AtABCG31; AtPDR3; Pleiotropic drug resistance protein 3", "protein_names_refseq": "pleiotropic drug resistance 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G29940)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;12430018;16506311;18299247;19245862;24474628;26334616;27862469", "class_list": "", "function": "Together with ABCG25, export abscisic acid (ABA) from the endosperm to deliver it to the embryo via ABCG30 and ABCG40-mediated import to suppress radicle extension and subsequent embryonic growth (PubMed:26334616). Together with ABCG9, involved in pollen coat deposition of steryl glycosides required for pollen fitness (PubMed:24474628). May be a general defense protein (By similarity)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "O80878", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0015562 efflux transmembrane transporter activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0070505 pollen coat", "go_biological_process": "GO:0055085 transmembrane transport;GO:0010496 intercellular transport;GO:0009738 abscisic acid-activated signaling pathway;GO:0010208 pollen wall assembly;GO:0048581 negative regulation of post-embryonic development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q7PC88-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7PCC6-1", "uniprot_id": [ { "id": "FDP_ARATH", "url": "https://www.uniprot.org/uniprot/Q7PCC6", "type": "external" } ], "mass": 26039.0, "length": 234, "protein_name": "bZIP transcription factor 27", "gene_name": "FDP", "organism": "Arabidopsis", "refseq_name": "basic region/leucine zipper motif 27", "refseq_ac": [ { "id": "NP_001189545", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189545", "type": "external" } ], "gene_names_uniprotkb": "FDP; BZIP27; T17A5.15", "gene_names_refseq": "ATBZIP27; BZIP27; FD PARALOG; FDP; T17A5.15; T17A5_15; basic region/leucine zipper motif 27", "protein_names_uniprotkb": "bZIP transcription factor 27; AtbZIP27; Protein FD PARALOG", "protein_names_refseq": "basic region/leucine zipper motif 27", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17770)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11906833;12084834;16099979;16099980;23543784;25661797;27862469", "class_list": "", "function": "Transcription factor required for the transition to flowering promoted by FT., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0JPV8;F4IPG9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:2000028 regulation of photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q7PCC6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7X6P3-1", "uniprot_id": [ { "id": "RUS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7X6P3", "type": "external" } ], "mass": 66385.0, "length": 608, "protein_name": "Protein root UVB sensitive 1, chloroplastic", "gene_name": "RUS1", "organism": "Arabidopsis", "refseq_name": "root UVB sensitive-like protein (Protein of unknown function, DUF647)", "refseq_ac": [ { "id": "NP_190175", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190175", "type": "external" } ], "gene_names_uniprotkb": "RUS1; F16L2.10; WXR3", "gene_names_refseq": "ROOT UVB SENSITIVE 1; RUS1; WEAK AUXIN RESPONSE 3; WXR3", "protein_names_uniprotkb": "Protein root UVB sensitive 1, chloroplastic; Protein WEAK AUXIN RESPONSE 3", "protein_names_refseq": "root UVB sensitive-like protein (Protein of unknown function, DUF647)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G45890)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;19075229;19515790;21511809;23580592;27862469", "class_list": "", "function": "Involved in a root UV-B sensing pathway and in the protection against the hypersensitivity to very low-fluence-rate (VLF) UV-B. RSU1 and RUS2 are probably both negative modulators of the same UV-B perception pathway, which when overstimulated in the roots causes a block to postgermination development. Required for polar auxin transport by maintaining the proper levels of auxin transporters AUX1 (AC Q96247) and PIN proteins on the plasma membrane., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZU1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0032502 developmental process;GO:0010224 response to UV-B", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q7X6P3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7X6Y7-1", "uniprot_id": [ { "id": "MMD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7X6Y7", "type": "external" } ], "mass": 80812.0, "length": 704, "protein_name": "PHD finger protein MALE MEIOCYTE DEATH 1", "gene_name": "MMD1", "organism": "Arabidopsis", "refseq_name": "RING/FYVE/PHD zinc finger superfamily protein", "refseq_ac": [ { "id": "NP_176791", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176791", "type": "external" } ], "gene_names_uniprotkb": "MMD1; DUET; F15E12.11", "gene_names_refseq": "F15E12.11; F15E12_11; MALE MEIOCYTE DEATH 1; MMD1", "protein_names_uniprotkb": "PHD finger protein MALE MEIOCYTE DEATH 1", "protein_names_refseq": "RING/FYVE/PHD zinc finger superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G66170)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12782723;14573517;27385818;27862469;32572214", "class_list": "", "function": "Probable transcription factor required for chromosome organization and progression during male meiosis (e.g. microsporogenesis) (PubMed:12782723, PubMed:14573517). Necessary for fertility and meiotic progressive compaction of prophase I chromosomes to metaphase I bivalents (PubMed:27385818). Together with JMJ16, promotes gene expression in male meiocytes in an H3K9me3-dependent manner, and contributes to meiotic chromosome condensation by triggering some condensin promoters (e.g. CAP-D3 and CAP-H) (PubMed:27385818, PubMed:32572214)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9C8D0", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0042393 histone binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000791 euchromatin", "go_biological_process": "GO:0007060 male meiosis chromosome segregation;GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression;GO:0006355 regulation of DNA-templated transcription;GO:0007140 male meiotic nuclear division", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q7X6Y7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7X8C5-1", "uniprot_id": [ { "id": "WAKLB_ARATH", "url": "https://www.uniprot.org/uniprot/Q7X8C5", "type": "external" } ], "mass": 83357.0, "length": 748, "protein_name": "Wall-associated receptor kinase-like 2", "gene_name": "WAKL2", "organism": "Arabidopsis", "refseq_name": "wall associated kinase-like 2", "refseq_ac": [ { "id": "NP_173064", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173064", "type": "external" } ], "gene_names_uniprotkb": "WAKL2; T24D18.21", "gene_names_refseq": "T24D18.21; T24D18_21; WAKL2; wall associated kinase-like 2", "protein_names_uniprotkb": "Wall-associated receptor kinase-like 2; 2.7.11.-", "protein_names_refseq": "wall associated kinase-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16130)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12068092;14576286;14593172;27862469", "class_list": "", "function": "Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component., [UniProtKB]", "predicted_glycosites": 8, "predicted_n_glycosites": 7, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "Q9S9M4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006952 defense response;GO:0007166 cell surface receptor signaling pathway;GO:0046777 protein autophosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q7X8C5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7X9V3-1", "uniprot_id": [ { "id": "GNAT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q7X9V3", "type": "external" } ], "mass": 28649.0, "length": 258, "protein_name": "GCN5-related N-acetyltransferase 2, chloroplastic", "gene_name": "NSI", "organism": "Arabidopsis", "refseq_name": "nuclear shuttle interacting", "refseq_ac": [ { "id": "NP_001077641", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077641", "type": "external" } ], "gene_names_uniprotkb": "NSI; GNAT2; SNAT1; SNAT; T12O21.3", "gene_names_refseq": "ACETYLTRANSFERASE; ATNSI; NSI; T12O21.3; T12O21_3; nuclear shuttle interacting", "protein_names_uniprotkb": "GCN5-related N-acetyltransferase 2, chloroplastic; 2.3.1.255; 2.3.1.48; 2.3.1.87; Acetyltransferase NSI; AtNSI; AtSNAT1; AtSNAT; Nuclear shuttle protein-interacting protein; Serotonin N-acetyl transferase 1", "protein_names_refseq": "nuclear shuttle interacting", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32070)", "pathway_count": 1, "publication_count": 24, "publication_id_list": "11130712;12837950;14993207;15452236;16461385;23776212;25250906;25561503;26828406;27047496;27600803;27862469;29770489;29967049;31865509;32064655;32354877;32633465;33806011;33811388;33924609;34234798;34812898;35792507", "class_list": "", "function": "(Microbial infection) Required for begomovirus infection and systemic spread (PubMed:12837950, PubMed:15452236, PubMed:16461385). In case of begomoviruses infection, acetylates the capsid protein (CP), but not the nuclear shuttle protein (NSP) (PubMed:12837950, PubMed:15452236, PubMed:16461385). Stimulates melatonin-triggered defense responses to the necrotrophic Botrytis cinerea (PubMed:34234798)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]; Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA), with a preference for alanine, serine, threonine, methionine and to a lower extent valine as substrates (can also use glycine and leucine), and epsilon-lysine acetylation (KA) of several plastid proteins (PubMed:32633465). Triggers lysine acetylation in KEA1 and KEA2 (PubMed:29967049, PubMed:31865509). Acetylates in vitro histones H2A and H3 (PubMed:12837950). Does not act as a transcriptional activator but required for the dynamic reorganization of thylakoid protein complexes and grana during photosynthetic state transitions (PubMed:16461385, PubMed:29967049, PubMed:35792507). Involved in melatonin biosynthesis by catalyzing the formation of N-acetylserotonin (NAS) from serotonin and of melatonin (N-acetyl-5-methoxytryptamine) from 5-methoxytryptamine (5-MT) (PubMed:25250906, PubMed:32354877). By triggering melatonin biosynthesis, contributes to the chloroplast protein quality control (CPQC), which plays a pivotal role in starch synthesis, and confers melatonin-associated tolerance to high light (HL) stress (PubMed:29770489, PubMed:33806011). Prevents the accumulation of oil and anthocyanin content in mature seeds and avoids seed germination in a melatonin-dependent manner, but promotes mucilage production in the seed coat (PubMed:32354877, PubMed:33811388). Contributes to melatonin-mediated anthocyanin production in cold-exposed seedlings (PubMed:27047496). Implicated in melatonin-monitored circadian dynamics of stomatal aperture to minimize night water loss and promote drought tolerance, partly by triggering hydrogen sulfide H(2)S-dependent stomotal closure in response to osmotic stress (PubMed:32064655, PubMed:33924609, PubMed:34812898)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MRN8;Q8LD61;Q9C6X3", "ec_number_list": [ { "id": "2.3.1.48", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.48", "type": "external" }, { "id": "2.3.1.87", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.87", "type": "external" }, { "id": "2.3.1.255", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.255", "type": "external" }, { "id": "2.3.1.259", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.259", "type": "external" } ], "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:0004402 histone acetyltransferase activity;GO:0004059 aralkylamine N-acetyltransferase activity;GO:0004468 L-lysine N-acetyltransferase activity, acting on acetyl phosphate as donor;GO:0008080 N-acetyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:1904880 response to hydrogen sulfide;GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0007623 circadian rhythm;GO:0042428 serotonin metabolic process", "synthesized_glycan_count": 0, "hit_score": 2.5, "record_id": "Q7X9V3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJ60-1", "uniprot_id": [ { "id": "EB1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJ60", "type": "external" } ], "mass": 31080.0, "length": 276, "protein_name": "Microtubule-associated protein RP/EB family member 1A", "gene_name": "EB1A", "organism": "Arabidopsis", "refseq_name": "microtubule end binding protein EB1A", "refseq_ac": [ { "id": "NP_190353", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190353", "type": "external" } ], "gene_names_uniprotkb": "EB1A; T23J7.20", "gene_names_refseq": "ARABIDOPSIS THALIANA MICROTUBULE END BINDING PROTEIN EB1A; ATEB1-HOMOLOG2; ATEB1A; ATEB1H2; AtEB1a; EB1a; microtubule end binding protein EB1A", "protein_names_uniprotkb": "Microtubule-associated protein RP/EB family member 1A; APC-binding protein EB1A; AtEB1A; AtEB1H2; End-binding protein 1A; Protein ATEB1 homolog 2", "protein_names_refseq": "microtubule end binding protein EB1A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G47690)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14557818;14593172;15879559;18281505;18408045;19706794;20067996;27862469", "class_list": "", "function": "Binds to the plus end of microtubules and regulates the dynamics of the microtubule cytoskeleton. May be involved in anchoring microtubules to their nucleation sites and/or functioning as a reservoir for distribution to the growing end. In plants, microtubule minus ends are not necessarily severed from the nucleation site and transported to the plus end of a microtubule as part of the recycling process. May play a role in endomembrane organization during polarized growth of plant cells. Interacts with the tobamovirus movement protein (MP) and may play a role in the association of MP with the microtubule system during infection., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STU4", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding;GO:0051010 microtubule plus-end binding", "go_cellular_component": "GO:0000922 spindle pole;GO:0005737 cytoplasm;GO:0051233 spindle midzone;GO:0005815 microtubule organizing center;GO:0005876 spindle microtubule", "go_biological_process": "GO:0031110 regulation of microtubule polymerization or depolymerization;GO:0051301 cell division;GO:0051225 spindle assembly;GO:0001578 microtubule bundle formation;GO:0035372 protein localization to microtubule", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q7XJ60-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJ98-1", "uniprot_id": [ { "id": "MUR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJ98", "type": "external" } ], "mass": 70744.0, "length": 619, "protein_name": "Xyloglucan galactosyltransferase MUR3", "gene_name": "MUR3", "organism": "Arabidopsis", "refseq_name": "Exostosin family protein", "refseq_ac": [ { "id": "NP_179627", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179627", "type": "external" } ], "gene_names_uniprotkb": "MUR3; F11A3.8; KAM1; RSA3", "gene_names_refseq": "AtMUR3; F11A3.8; F11A3_8; KAM1; KATAMARI 1; MUR3; MURUS 3; RSA3; SHORT ROOT IN SALT MEDIUM 3", "protein_names_uniprotkb": "Xyloglucan galactosyltransferase MUR3; 2.4.1.-; AtMUR3; Protein KATAMARI; Protein MURUS 3; Protein SHORT ROOT IN SALT MEDIUM 3", "protein_names_refseq": "Exostosin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;12837954;15020758;15863516;18657237;23571490;24905498;25392066;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Involved in the attachment of the Gal residue on the third xylosyl unit within the XXXG core structure of xyloglucan, the principal glycan that interlaces the cellulose microfibrils in plant cell wall (PubMed:12837954). Associates with other xyloglucan-synthesizing enzymes to form multiprotein complexes for xyloglucan synthesis in the Golgi (PubMed:25392066). Interacts with actin and is required for the proper endomembrane organization and for the cell elongation. Not involved in the trafficking from the endoplasmic reticulum to the vacuoles (PubMed:15863516). Involved in salt stress tolerance. Participates in the control of the expression of genes encoding for proteins involved in reactive oxygen species (ROS) detoxification under salt stress. May contribute to the maintenance of the proper organization of actin microfilaments during salt stress-induced ROS production (PubMed:23571490)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWH9;Q494P2;Q9SK65;W8QNZ0", "ec_number_list": [], "go_molecular_function": "GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0032580 Golgi cisterna membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0010256 endomembrane system organization;GO:0009826 unidimensional cell growth;GO:0009863 salicylic acid mediated signaling pathway;GO:0009969 xyloglucan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q7XJ98-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJJ7-1", "uniprot_id": [ { "id": "FAAH_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJJ7", "type": "external" } ], "mass": 66079.0, "length": 607, "protein_name": "Fatty acid amide hydrolase", "gene_name": "FAAH", "organism": "Arabidopsis", "refseq_name": "fatty acid amide hydrolase", "refseq_ac": [ { "id": "NP_201249", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201249", "type": "external" } ], "gene_names_uniprotkb": "FAAH; T12B11.3", "gene_names_refseq": "AtFAAH; FAAH; fatty acid amide hydrolase", "protein_names_uniprotkb": "Fatty acid amide hydrolase; 3.5.1.99; AtFAAH; N-acylethanolamine amidohydrolase", "protein_names_refseq": "fatty acid amide hydrolase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64440)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "12824167;14593172;16624618;16738862;16880402;18643971;19801664;22645580;24918118;25561503;27862469;28112243;29654922;30894416", "class_list": "", "function": "Catalyzes the hydrolysis of bioactive endogenous fatty acid amides to their corresponding acids (PubMed:12824167). The hydrolysis of endogenous amidated lipids terminates their participation as lipid mediators in various signaling systems (Probable). Converts a wide range of N-acylethanolamines (NAEs) to their corresponding free fatty acids and ethanolamine (PubMed:12824167, PubMed:16624618, PubMed:16738862, PubMed:16880402). Can use oleamide as substrate, but not indole-3-acetamide, 1-naphtalene-acetamide, nicotinic acid amide or L-asparagine (PubMed:16738862). Can use 2-arachidonylglycerol as substrate (PubMed:19801664). Participates in the regulation of plant growth (PubMed:16880402). Hydrolyzes N-dodecanoylethanolamine, which is has a growth inhibitory effect on seedling growth (PubMed:28112243). Involved in plant defense signaling (PubMed:18643971). Involved in abscisic acid (ABA) signaling through mechanisms that are independent of the catalytic activity (PubMed:19801664). Involved in the regulation of flowering time (PubMed:22645580). Catalyzes the hydrolysis of N-acyl L-homoserine lactones (AHLs), which are a class of signaling molecules produced by bacteria for quorum sensing (PubMed:24918118). Accumulation of L-homoserine appears to encourage plant growth at low concentrations by stimulating transpiration, but higher concentrations inhibit growth by stimulating ethylene production (PubMed:24918118)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93ZI9;Q9FGF2;Q9LLC0", "ec_number_list": [ { "id": "3.5.1.99", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.99", "type": "external" } ], "go_molecular_function": "GO:0017064 fatty acid amide hydrolase activity;GO:0047412 N-(long-chain-acyl)ethanolamine deacylase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0070291 N-acylethanolamine metabolic process;GO:0016042 lipid catabolic process;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q7XJJ7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJR9-1", "uniprot_id": [ { "id": "CDPKG_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJR9", "type": "external" } ], "mass": 64754.0, "length": 571, "protein_name": "Calcium-dependent protein kinase 16", "gene_name": "CPK16", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 16", "refseq_ac": [ { "id": "NP_179379", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179379", "type": "external" } ], "gene_names_uniprotkb": "CPK16; T13L16.9", "gene_names_refseq": "AtCDPK16; CDPK16; CPK16; T13L16.9; T13L16_9; calcium-dependent protein kinase 16", "protein_names_uniprotkb": "Calcium-dependent protein kinase 16; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17890)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;12068094;12805596;12913141;20466843;21219905;23943848;27862469", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004672 protein kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0051592 response to calcium ion", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q7XJR9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJT7-1", "uniprot_id": [ { "id": "BSK12_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJT7", "type": "external" } ], "mass": 52281.0, "length": 465, "protein_name": "Probable inactive receptor-like kinase BSK12", "gene_name": "BSK12", "organism": "Arabidopsis", "refseq_name": "kinase with tetratricopeptide repeat domain-containing protein", "refseq_ac": [ { "id": "NP_179301", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179301", "type": "external" } ], "gene_names_uniprotkb": "BSK12; F6P23.23; SSP", "gene_names_refseq": "BSK12; F6P23.23; F6P23_23; SHORT SUSPENSOR; SSP; brassinosteroid-signaling kinase 12", "protein_names_uniprotkb": "Probable inactive receptor-like kinase BSK12; Brassinosteroid-signaling kinase 12; Protein SHORT SUSPENSOR", "protein_names_refseq": "kinase with tetratricopeptide repeat domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17090)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;12912986;19286558;27862469;28821747", "class_list": "", "function": "Probable inactive protein kinase that activates the YODA MAP kinase cascade, which regulates the asymmetric first division and embryo polarity, by promoting the elongation of the zygote and the development of its basal daughter cell into the extra-embryonic suspensor. Acts as an adapter at the plasma membrane, possibly by recruiting and binding an activator., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009898 cytoplasmic side of plasma membrane", "go_biological_process": "GO:1902533 positive regulation of intracellular signal transduction;GO:0009742 brassinosteroid mediated signaling pathway;GO:0010098 suspensor development;GO:0080159 zygote elongation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q7XJT7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XXN8-1", "uniprot_id": [ { "id": "DVL16_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XXN8", "type": "external" } ], "mass": 6238.0, "length": 53, "protein_name": "Small polypeptide DEVIL 16", "gene_name": "DVL16", "organism": "Arabidopsis", "refseq_name": "DVL family protein", "refseq_ac": [ { "id": "NP_973616", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_973616", "type": "external" } ], "gene_names_uniprotkb": "DVL16; ROT4; T1J8", "gene_names_refseq": "DEVIL 16; DVL16; ROT4; ROTUNDIFOLIA4", "protein_names_uniprotkb": "Small polypeptide DEVIL 16; Small polypeptide ROT-FOUR; Small polypeptide ROTUNDIFOLIA 4", "protein_names_refseq": "DVL family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G36985)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14871303;15125775;20826883;25701405;27862469", "class_list": "", "function": "Small polypeptide acting as a regulatory molecule which coordinates cellular responses required for differentiation, growth and development, probably by restricting polar cell proliferation in lateral organs (e.g. leaves) and coordinating socket cell recruitment and differentiation at trichome sites (PubMed:15125775, PubMed:20826883, PubMed:25701405, Ref.6). Regulates the positional cue and cell proliferation along the body axis (PubMed:20826883)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0008285 negative regulation of cell population proliferation;GO:0042127 regulation of cell population proliferation;GO:0009416 response to light stimulus;GO:0048367 shoot system development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q7XXN8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XYY2-1", "uniprot_id": [ { "id": "MED25_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XYY2", "type": "external" } ], "mass": 89566.0, "length": 836, "protein_name": "Mediator of RNA polymerase II transcription subunit 25", "gene_name": "MED25", "organism": "Arabidopsis", "refseq_name": "phytochrome and flowering time regulatory protein (PFT1)", "refseq_ac": [ { "id": "NP_001077596", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077596", "type": "external" } ], "gene_names_uniprotkb": "MED25; F2J7.4; MED25_1; PFT1", "gene_names_refseq": "F2J7.4; F2J7_4; MED25; PFT1; PHYTOCHROME AND FLOWERING TIME 1; mediator 25", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 25; AtMED25; Phytochrome and flowering time 1 protein; Phytochrome and flowering time regulatory protein 1", "protein_names_refseq": "phytochrome and flowering time regulatory protein (PFT1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G25540)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;12815435;16183832;17560376;18790998;19671879;21343311;21536906;21985558;22021418;22447446;22822206;22992513;23776212;27862469;28154133", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Positive regulator of shade avoidance and of jasmonate signaling. Acts in repression of PhyB-mediated light signaling and regulates the expression of FLOWERING LOCUS T (FT) and of CONSTANS (CO)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 3, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 3, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 3, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "F4ICJ2;Q9C6M3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003713 transcription coactivator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005667 transcription regulator complex;GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription;GO:0050832 defense response to fungus;GO:0009585 red, far-red light phototransduction", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q7XYY2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XZF5-1", "uniprot_id": [ { "id": "RST1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XZF5", "type": "external" } ], "mass": 203747.0, "length": 1841, "protein_name": "Protein RST1", "gene_name": "RST1", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": [ { "id": "NP_189404", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189404", "type": "external" } ], "gene_names_uniprotkb": "RST1; MGF10.8", "gene_names_refseq": "RESURRECTION1; RST1", "protein_names_uniprotkb": "Protein RST1; Protein RESURRECTION 1", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G27670)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10819329;16183838;19625635;22074104;27862469;31076735;31221737;31455787", "class_list": "", "function": "Involved in cuticular wax formation (PubMed:16183838, PubMed:19625635). Required for the synthesis of alkanes from wax precursors (PubMed:16183838, PubMed:19625635). May play a role in acyl-CoA reduction to aldehydes (PubMed:16183838). Is repressed by FREE1 and functions downstream of FREE1 to negatively regulate multivesicular body (MVB) biogenesis and vacuolar transport (PubMed:31221737). Together with CER16/RIPR, acts as a cofactor of the cytoplasmic exosome and connects the cytosolic RNA exosome to the SKI complex (PubMed:31455787). Acts as a post-transcriptional gene silencing (PTGS) suppressor (PubMed:31076735, PubMed:31455787). RST1 can, like CER16/RIPR, suppress the production of small interfering RNAs (siRNAs) from the CER3 locus, which is involved in cuticule membrane and wax production, and in the typhine and sporopollenin biosynthesis of pollen (PubMed:31455787)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IWL6;Q9LVX3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0006952 defense response;GO:1900369 negative regulation of post-transcriptional gene silencing by regulatory ncRNA;GO:0009793 embryo development ending in seed dormancy;GO:0010143 cutin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q7XZF5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XZU3-1", "uniprot_id": [ { "id": "SAC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XZU3", "type": "external" } ], "mass": 102812.0, "length": 912, "protein_name": "Phosphatidylinositol-3-phosphatase SAC1", "gene_name": "SAC1", "organism": "Arabidopsis", "refseq_name": "Phosphoinositide phosphatase family protein", "refseq_ac": [ { "id": "NP_173676", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173676", "type": "external" } ], "gene_names_uniprotkb": "SAC1; F12K8.3; FIG4; FRA7; T22J18.20", "gene_names_refseq": "ATSAC1; F12K8.3; SAC1; suppressor of actin 1", "protein_names_uniprotkb": "Phosphatidylinositol-3-phosphatase SAC1; 3.1.3.64; AtFIG4; AtSAC1; Factor-induced gene 4-like protein; Phosphatidylinositol 3,5-bisphosphate 5-phosphatase SAC1; Phosphatidylinositol-4-phosphate phosphatase; Protein FRAGILE FIBER 7; Protein SUPPRESSOR OF ACTIN 1; SAC domain protein 1", "protein_names_refseq": "Phosphoinositide phosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22620)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;12805586;15805481;21768351;22074104;22631563;23111157;23572148;24043427;25561503;27862469;28011693;30833711", "class_list": "", "function": "Phosphoinositide phosphatase which catalyzes the hydrolysis of phosphatidylinositol-3,5-bisphosphate (PtdIns(3,5)P2) (PubMed:15805481). Can also catalyze the hydrolysis of phosphatidylinositol 3-phosphate (PtdIns(3)P) and phosphatidylinositol 4-phosphate (PtdIns(4)P) (By similarity). Required for normal cell morphogenesis, cell wall synthesis, and actin organization (PubMed:15805481)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80557;Q9SKA4", "ec_number_list": [ { "id": "3.1.3.64", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.64", "type": "external" }, { "id": "3.1.3.95", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.95", "type": "external" }, { "id": "3.1.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.-", "type": "external" } ], "go_molecular_function": "GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity;GO:0043812 phosphatidylinositol-4-phosphate phosphatase activity;GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005774 vacuolar membrane", "go_biological_process": "GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process;GO:0007010 cytoskeleton organization;GO:0046856 phosphatidylinositol dephosphorylation;GO:0009826 unidimensional cell growth;GO:0009832 plant-type cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q7XZU3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7Y1W1-1", "uniprot_id": [ { "id": "TIC56_ARATH", "url": "https://www.uniprot.org/uniprot/Q7Y1W1", "type": "external" } ], "mass": 61625.0, "length": 527, "protein_name": "Protein TIC 56, chloroplastic", "gene_name": "TIC56", "organism": "Arabidopsis", "refseq_name": "histone-lysine N-methyltransferase ATXR3-like protein", "refseq_ac": [ { "id": "NP_568092", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568092", "type": "external" } ], "gene_names_uniprotkb": "TIC56; F7A7_110", "gene_names_refseq": "F7A7.110; F7A7_110; TIC56; TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 56", "protein_names_uniprotkb": "Protein TIC 56, chloroplastic; AtTIC56; Translocon at the inner envelope membrane of chloroplasts 56", "protein_names_refseq": "histone-lysine N-methyltransferase ATXR3-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01590)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;18463617;23372012;27862469", "class_list": "", "function": "Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7Y1Z4;Q9M016", "ec_number_list": [], "go_molecular_function": "GO:0008320 protein transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0045037 protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q7Y1W1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7Y220-1", "uniprot_id": [ { "id": "PLIP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7Y220", "type": "external" } ], "mass": 71735.0, "length": 649, "protein_name": "Phospholipase A1 PLIP1, chloroplastic", "gene_name": "PLIP1", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001327423", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327423", "type": "external" } ], "gene_names_uniprotkb": "PLIP1; F15G16.70", "gene_names_refseq": "", "protein_names_uniprotkb": "Phospholipase A1 PLIP1, chloroplastic; 3.1.1.26; 3.1.1.32; Galactolipase PLIP1; Protein PLASTID LIPASE 1", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G61680)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;27862469;28687655", "class_list": "", "function": "Sn-1-specific phospholipase A1 involved in seed oil biosynthesis. Hydrolyzes polyunsaturated acyl groups from a unique chloroplast-specific phosphatidylglycerol (PG) that contains 16:1 delta 3-trans as its second acyl group. The polyunsaturated acyl groups released by PLIP1 are exported from the chloroplast, reincorporated into phosphatidylcholine (PC), and ultimately enter seed triacylglycerol (TAG). In vitro, possesses broad substrate specificity. Can hydrolyze the galactolipid monogalactosyldiacylglycerol (MGDG), and the phoshpolipids phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidic acid (PA), phosphatidylserine (PS) phosphatidylglycerol (PG) and phosphatidylinositol (PI)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M370", "ec_number_list": [ { "id": "3.1.1.32", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.32", "type": "external" }, { "id": "3.1.1.26", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.26", "type": "external" } ], "go_molecular_function": "GO:0008970 phospholipase A1 activity;GO:0047714 galactolipase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0015908 fatty acid transport;GO:0019432 triglyceride biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q7Y220-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84J37-1", "uniprot_id": [ { "id": "LAC15_ARATH", "url": "https://www.uniprot.org/uniprot/Q84J37", "type": "external" } ], "mass": 63994.0, "length": 565, "protein_name": "Laccase-15", "gene_name": "TT10", "organism": "Arabidopsis", "refseq_name": "Laccase/Diphenol oxidase family protein", "refseq_ac": [ { "id": "NP_199621", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199621", "type": "external" } ], "gene_names_uniprotkb": "TT10; LAC15; MDN11.18", "gene_names_refseq": "ATLAC15; AtTT10; LAC15; LACCASE-LIKE 15; MDN11.18; MDN11_18; TRANSPARENT TESTA 10; TT10", "protein_names_uniprotkb": "Laccase-15; 1.10.3.2; Benzenediol:oxygen oxidoreductase 15; Diphenol oxidase 15; Protein TRANSPARENT TESTA 10; Urishiol oxidase 15", "protein_names_refseq": "Laccase/Diphenol oxidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48100)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10470850;10677433;14593172;15940465;16243908;16779554;16804053;23473981;27862469", "class_list": "", "function": "Lignin degradation and detoxification of lignin-derived products (By similarity). Involved in lignin synthesis in seed coats, in seed coat permeability, in seed germination, and in root elongation. Required for the seed coat (testa) brown pigmentation by mediating the polymerization of proanthocyanidin (tannin) from its monomer precursor epicatechin. Slightly promotes seed dormancy., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 9, "predicted_n_glycosites": 9, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "Q9FI28", "ec_number_list": [ { "id": "1.10.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.10.3.2", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0005507 copper ion binding;GO:0052716 hydroquinone:oxygen oxidoreductase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0046688 response to copper ion;GO:0009813 flavonoid biosynthetic process;GO:0009809 lignin biosynthetic process;GO:0046274 lignin catabolic process;GO:0010023 proanthocyanidin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84J37-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L856-1", "uniprot_id": [ { "id": "ACFR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L856", "type": "external" } ], "mass": 25865.0, "length": 239, "protein_name": "Transmembrane ascorbate ferrireductase 1", "gene_name": "ACYB-2; CYB561A", "organism": "Arabidopsis", "refseq_name": "Cytochrome b561/ferric reductase transmembrane protein family", "refseq_ac": [ { "id": "NP_001328918", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328918", "type": "external" } ], "gene_names_uniprotkb": "ACYB-2; CYB561A; ACYB-2; CYB561B1; CYBASC1; M7J2.60; M7J2_60", "gene_names_refseq": "ACYB-2; M7J2.60; M7J2_60", "protein_names_uniprotkb": "Transmembrane ascorbate ferrireductase 1; 7.2.1.3; Artb561-1; AtCytb561; Cytochrome b561; Protein b561A.tha5; TCytb; Tonoplast Cyt-b561", "protein_names_refseq": "Cytochrome b561/ferric reductase transmembrane protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25570)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;11732342;12768339;14593172;14730083;15032866;16169296;17376442;21236254;22526465;23249217;27862469", "class_list": "", "function": "Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane ferric-chelate reduction. Able to use dihydrolipoic acid (DHLA) as an alternative substrate to ascorbate., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65605;Q8LE60;Q9CAZ1;Q9M0K3", "ec_number_list": [ { "id": "7.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0009055 electron transfer activity;GO:0019904 protein domain specific binding;GO:0046872 metal ion binding;GO:0016491 oxidoreductase activity;GO:0140571 transmembrane ascorbate ferrireductase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005773 vacuole;GO:0000325 plant-type vacuole;GO:0009507 chloroplast;GO:0009705 plant-type vacuole membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8L856-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWR1-1", "uniprot_id": [ { "id": "JMJ30_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWR1", "type": "external" } ], "mass": 48075.0, "length": 429, "protein_name": "Lysine-specific demethylase JMJ30", "gene_name": "JMJ30; JMJD5", "organism": "Arabidopsis", "refseq_name": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "refseq_ac": [ { "id": "NP_566667", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566667", "type": "external" } ], "gene_names_uniprotkb": "JMJ30; JMJD5; JMJ30; JMJD5; MOE17.12; jumonji domain containing 5", "gene_names_refseq": "JMJ30; JMJD5; Jumonji C domain-containing protein 30; jumonji domain containing 5", "protein_names_uniprotkb": "Lysine-specific demethylase JMJ30; 1.14.11.27; 1.14.11.68; 1.14.11.69; AtJMJ30; AtJMJD5; JmjC domain-containing protein 30; Jumonji domain-containing protein 5; [histone H3]-trimethyl-L-lysine(36) monodemethylase JMJ30", "protein_names_refseq": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20810)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10819329;11130713;14593172;18713399;21115819;21139085;21358285;22060019;25132385;25267112;27862469;29923261;30774641;30859592;30983495;33324437", "class_list": "", "function": "Histone demethylase that demethylates 'Lys-36' (H3K36me) of histone H3 with a specific activity for H3K36me3 and H3K36me2 (PubMed:25132385, PubMed:30774641). Also active on 'Lys-27' (H3K27me) of histone H3 with a specific activity for H3K27me3 and H3K27me2 (PubMed:25267112, PubMed:30774641, PubMed:33324437). No activity on H3K36me1 and H3K27me1 (PubMed:25132385, PubMed:25267112). Involved in the control of flowering time by demethylating H3K36me2 at the FT locus and repressing its expression (PubMed:25132385). Acts within the central clock and contributes, in parallel with LUX, to temperature compensation, probably as a component of the evening complex, to maintain circadian period at increasing temperatures; this mechanism involves binding to and regulation of CCA1 and PRR7 promoters (PubMed:21358285, PubMed:30774641). Works in concert with TOC1 to promote the morning-phased clock genes CCA1 and LHY which function as components of the central oscillator (PubMed:21358285). Together with JMJ32, regulates the flowering-repressor FLOWERING LOCUS C (FLC) locus by removing the repressive histone modification H3 lysine 27 trimethylation (H3K27me3), especially at elevated temperatures (e.g. 29 degrees Celsius), thus preventing extreme precocious flowering (PubMed:25267112). JMJ30 and JMJ32 are regulators involved in the integration of abscisic acid (ABA) and brassinosteroids (BR) signaling pathways (PubMed:33324437). Together with JMJ32, controls ABA-mediated growth arrest during the post-germination stage in unfavorable conditions, and responses to ABA during root development, via the removal of repressive histone mark (H3K27me3) from the SnRK2.8 promoter, thus promoting SnRK2.8 expression and subsequent kinase-dependent ABI3 activation (PubMed:30859592, PubMed:30983495). In addition, removes the repressive histone marks (H3K27me3) from the BZR1 locus in response to stress and ABA, thus activating the BR signaling pathway which, in turn, inhibits the ABA signaling pathway (PubMed:33324437). Able to drive tissue identity changes to promote callus formation form somatic cells via a massive genome-wide chromatin remodeling (e.g. H3K9me3 demethylation) leading to the induction of Lateral organ Boundaries-Domain (LBD) genes (e.g. LBD16 and LBD29) that establish root primordia; when in complex with ARF proteins (e.g. ARF7 and ARF19), recruits ATXR2 which promotes the deposition of H3K36me3 at LBD genes promoters, thus ensuring their stable activation during callus formation (PubMed:29923261)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LT40", "ec_number_list": [ { "id": "1.14.11.68", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.68", "type": "external" }, { "id": "1.14.11.27", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.27", "type": "external" }, { "id": "1.14.11.69", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.69", "type": "external" } ], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046872 metal ion binding;GO:0043565 sequence-specific DNA binding;GO:0016706 2-oxoglutarate-dependent dioxygenase activity;GO:0046975 histone H3K36 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0000791 euchromatin", "go_biological_process": "GO:0009266 response to temperature stimulus;GO:0007623 circadian rhythm;GO:0042752 regulation of circadian rhythm;GO:0010468 regulation of gene expression;GO:0045814 negative regulation of gene expression, epigenetic", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8RWR1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYQ5-1", "uniprot_id": [ { "id": "MPK12_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYQ5", "type": "external" } ], "mass": 42475.0, "length": 372, "protein_name": "Mitogen-activated protein kinase 12", "gene_name": "MPK12", "organism": "Arabidopsis", "refseq_name": "mitogen-activated protein kinase 12", "refseq_ac": [ { "id": "NP_001325006", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325006", "type": "external" } ], "gene_names_uniprotkb": "MPK12; ATMPK12; MAPK12; T3F17.28", "gene_names_refseq": "ATMPK12; MAPK12; MPK12; T3F17.28; mitogen-activated protein kinase 12", "protein_names_uniprotkb": "Mitogen-activated protein kinase 12; 2.7.11.24; AtMPK12; MAP kinase 12", "protein_names_refseq": "mitogen-activated protein kinase 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46070)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11910074;16537113;19000167;27694184;27862469;27923039", "class_list": "", "function": "Negative regulator of the auxin transduction signaling pathway (PubMed:19000167). Involved in stomatal movement regulation by phosphorylating and repressing HT1 and HT1-mediated GHR1 phosphorylation (PubMed:27694184, PubMed:27923039). Required for CO(2)-mediated stomatal movements (e.g. closure) (PubMed:27923039)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82361", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0004707 MAP kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation;GO:0071244 cellular response to carbon dioxide;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GYQ5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWN0-1", "uniprot_id": [ { "id": "ULP1C_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWN0", "type": "external" } ], "mass": 66079.0, "length": 571, "protein_name": "Ubiquitin-like-specific protease 1C", "gene_name": "OTS2; ULP1C", "organism": "Arabidopsis", "refseq_name": "Cysteine proteinases superfamily protein", "refseq_ac": [ { "id": "NP_172527", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172527", "type": "external" } ], "gene_names_uniprotkb": "OTS2; ULP1C; OTS2; OVERLY TOLERANT TO SALT 2; T10O24.20; T10O24_20; UB-LIKE PROTEASE 1C; ULP1C", "gene_names_refseq": "OTS2; OVERLY TOLERANT TO SALT 2; T10O24.20; T10O24_20; UB-LIKE PROTEASE 1C; ULP1C", "protein_names_uniprotkb": "Ubiquitin-like-specific protease 1C; 3.4.22.-; Protein OVERLY TOLERANT TO SALT 2", "protein_names_refseq": "Cysteine proteinases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10570)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;12482876;14593172;16740136;16920872;18849491;27862469", "class_list": "", "function": "Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Protease activity mainly directed at deconjugating SUM1 and SUM2 from their target proteins. Regulates salt stress responses and flowering time. Redundant with ULP1D., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EDF1;Q9XIJ4", "ec_number_list": [], "go_molecular_function": "GO:0016929 deSUMOylase activity;GO:0070139 SUMO-specific endopeptidase activity;GO:0008234 cysteine-type peptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm", "go_biological_process": "GO:0006508 proteolysis;GO:0009651 response to salt stress;GO:0016926 protein desumoylation;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RWN0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1S6-1", "uniprot_id": [ { "id": "RU2B2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1S6", "type": "external" } ], "mass": 26223.0, "length": 229, "protein_name": "U2 small nuclear ribonucleoprotein B'' 2", "gene_name": "U2BL", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "U2BL; F10K1.32; F10K1_32", "gene_names_refseq": "", "protein_names_uniprotkb": "U2 small nuclear ribonucleoprotein B'' 2; U2 snRNP B'' 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06960)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;15987817;27862469;9819359", "class_list": "", "function": "Involved in nuclear pre-mRNA splicing., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MRK1;F4HNV4;Q8RXP9;Q9LMJ0", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005681 spliceosomal complex;GO:0015030 Cajal body", "go_biological_process": "GO:0009631 cold acclimation;GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8H1S6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GY65-1", "uniprot_id": [ { "id": "SOK4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GY65", "type": "external" } ], "mass": 38927.0, "length": 343, "protein_name": "Protein SOSEKI 4", "gene_name": "SOK4", "organism": "Arabidopsis", "refseq_name": "UPSTREAM OF FLC-like protein (DUF966)", "refseq_ac": [ { "id": "NP_190197", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190197", "type": "external" } ], "gene_names_uniprotkb": "SOK4; AUXRP3; F12M12.80", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein SOSEKI 4; AtAuxRP3; AtSOK4; Auxin-regulated protein 3", "protein_names_refseq": "UPSTREAM OF FLC-like protein (DUF966)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G46110)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;11910074;14593172;14993207;25561503;27862469;30737509;31207460;32004461", "class_list": "", "function": "SOSEKI proteins (SOK1-5) locally interpret global polarity cues and can influence cell division orientation to coordinate cell polarization relative to body axes, probably by guiding ANGUSTIFOLIA (AN) polarized localization (PubMed:30737509). Positive regulator of auxin (indole-3-acetic acid, IAA) biosynthesis and signaling pathway leading to the modulation of seedling growth, plant and inflorescence development (PubMed:31207460). Negative regulator of stress responses (e.g. salinity and osmotic stress) (PubMed:31207460)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4J7X6;Q9LX84", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0051301 cell division;GO:0051258 protein polymerization;GO:1902074 response to salt;GO:0051302 regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GY65-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GTS1-1", "uniprot_id": [ { "id": "BZP24_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GTS1", "type": "external" } ], "mass": 26091.0, "length": 227, "protein_name": "Basic leucine zipper 24", "gene_name": "BZIP24", "organism": "Arabidopsis", "refseq_name": "basic leucine zipper 24", "refseq_ac": [ { "id": "NP_850680", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850680", "type": "external" } ], "gene_names_uniprotkb": "BZIP24; ATBZIP24; F4F15.70; basic leucine zipper 24", "gene_names_refseq": "ATBZIP24; BZIP24; basic leucine zipper 24", "protein_names_uniprotkb": "Basic leucine zipper 24; AtbZIP24; bZIP protein 24", "protein_names_refseq": "basic leucine zipper 24", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51960)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;11906833;11910074;14593172;18703123;19248824;27862469", "class_list": "", "function": "Transcription factor involved in the regulation of salt stress response. Functions as a negative transcriptional regulator of salt stress acclimation response by regulating cation homeostasis (PubMed:18703123, PubMed:19248824). Negatively regulates the expression of genes contributing to ion and osmotic homeostasis during salt stress, such as the Na(+) transporter HKT1, the Na(+)/H(+) antiporter SOS1, the aquaporin PIP2-1 and the glutamine synthetase GLN1-3. In addition, targets genes with functions in plant growth and development, such as argonaute 4 (AGO4) and cyclophilin 19 (CYP19) (PubMed:19248824)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SV08", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006970 response to osmotic stress;GO:0009651 response to salt stress;GO:0042538 hyperosmotic salinity response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GTS1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8Y9-1", "uniprot_id": [ { "id": "WNK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8Y9", "type": "external" } ], "mass": 65327.0, "length": 568, "protein_name": "Serine/threonine-protein kinase WNK2", "gene_name": "WNK2", "organism": "Arabidopsis", "refseq_name": "with no lysine (K) kinase 2", "refseq_ac": [ { "id": "NP_188881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188881", "type": "external" } ], "gene_names_uniprotkb": "WNK2; ATWNK2; MCB17.15; PROTEIN KINASE; ZIK3; with no lysine (K) kinase 2", "gene_names_refseq": "ARABIDOPSIS THALIANA WITH NO K 2; ATWNK2; PROTEIN KINASE; WNK2; ZIK3; with no lysine (K) kinase 2", "protein_names_uniprotkb": "Serine/threonine-protein kinase WNK2; 2.7.11.1; AtWNK2; Protein kinase with no lysine 2", "protein_names_refseq": "with no lysine (K) kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G22420)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;11130713;12506983;18761494;21768351;25561503;27862469", "class_list": "", "function": "Regulates flowering time by modulating the photoperiod pathway. Possesses kinase activity in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LUV8", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0035556 intracellular signal transduction;GO:0048573 photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8S8Y9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0W1-1", "uniprot_id": [ { "id": "PLSP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0W1", "type": "external" } ], "mass": 32554.0, "length": 291, "protein_name": "Chloroplast processing peptidase", "gene_name": "PLSP1", "organism": "Arabidopsis", "refseq_name": "plastidic type i signal peptidase 1", "refseq_ac": [ { "id": "NP_001319633", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319633", "type": "external" } ], "gene_names_uniprotkb": "PLSP1; MOB24.17", "gene_names_refseq": "PLSP1; plastidic type i signal peptidase 1", "protein_names_uniprotkb": "Chloroplast processing peptidase; 3.4.21.89; Signal peptidase I-3", "protein_names_refseq": "plastidic type i signal peptidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24590)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10907853;11130713;14593172;16275749;27862469", "class_list": "", "function": "Involved in the maturation of the plastid protein translocation channel. Required for the biogenesis of plastid internal membranes. May also function as a thylakoidal processing peptidase., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q66GJ6;Q9LV44", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0008233 peptidase activity;GO:0009003 signal peptidase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009526 plastid envelope;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0051604 protein maturation;GO:0006465 signal peptide processing;GO:0010027 thylakoid membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8H0W1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84XF3-1", "uniprot_id": [ { "id": "DRP1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q84XF3", "type": "external" } ], "mass": 68084.0, "length": 610, "protein_name": "Phragmoplastin DRP1B", "gene_name": "DL1B; DRP1B", "organism": "Arabidopsis", "refseq_name": "DYNAMIN-like 1B", "refseq_ac": [ { "id": "NP_191735", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191735", "type": "external" } ], "gene_names_uniprotkb": "DL1B; DRP1B; ADL1B; DYNAMIN-like 1B; F15G16.150; F21F14.15", "gene_names_refseq": "ADL1B; DL1B; DYNAMIN-like 1B; F21F14.15", "protein_names_uniprotkb": "Phragmoplastin DRP1B; 3.6.5.-; AtDRP1B; Dynamin-like protein B; Dynamin-related protein 1B", "protein_names_refseq": "DYNAMIN-like 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G61760)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;11351070;14750516;18612642;18621982;22223895;25561503;27862469", "class_list": "", "function": "Microtubule-associated force-producing protein that is targeted to at the leading edges of the forming cell plate during cytokinesis (PubMed:18612642). Has a GTPase activity (By similarity)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M362", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0005874 microtubule;GO:0016020 membrane;GO:0009524 phragmoplast", "go_biological_process": "GO:0072583 clathrin-dependent endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84XF3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYU8-1", "uniprot_id": [ { "id": "ICR5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYU8", "type": "external" } ], "mass": 45680.0, "length": 396, "protein_name": "Interactor of constitutive active ROPs 5", "gene_name": "ICR5; RIP3", "organism": "Arabidopsis", "refseq_name": "ROP interactive partner 4", "refseq_ac": [ { "id": "NP_001326318", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326318", "type": "external" } ], "gene_names_uniprotkb": "ICR5; RIP3; F4P12.50; MIDD1; Microtubule Depletion Domain 1; RIP3; RIP4; ROP interactive partner 3; ROP interactive partner 4", "gene_names_refseq": "MIDD1; Microtubule Depletion Domain 1; RIP3; RIP4; ROP interactive partner 3; ROP interactive partner 4", "protein_names_uniprotkb": "Interactor of constitutive active ROPs 5; Protein MICROTUBULE DEPLETION DOMAIN 1; ROP-interactive partner 3", "protein_names_refseq": "ROP interactive partner 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G53350)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;14993207;19825600;20619818;20832900;22984069;24280391;27862469", "class_list": "", "function": "ROP effector binding specifically activated ROPs and linking them to the microtubule cytoskeleton. Involved in ROP-regulated polar growth. Involved in local disassembly of cortical microtubules when associated with ARAC10 and KIN13A and conversely also mediates the elimination of ARAC10 from the plasma membrane by the cortical microtubules. Accumulates at the plus end of shrinking microtubules. Targets KIN13A to microtubules., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFI2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005874 microtubule;GO:0005886 plasma membrane", "go_biological_process": "GO:0043622 cortical microtubule organization;GO:0009664 plant-type cell wall organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8VYU8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84W41-1", "uniprot_id": [ { "id": "GLR36_ARATH", "url": "https://www.uniprot.org/uniprot/Q84W41", "type": "external" } ], "mass": 100530.0, "length": 903, "protein_name": "Glutamate receptor 3.6", "gene_name": "GLR3.6; GLR36", "organism": "Arabidopsis", "refseq_name": "glutamate receptor 3.6", "refseq_ac": [ { "id": "NP_001326369", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326369", "type": "external" } ], "gene_names_uniprotkb": "GLR3.6; GLR36; ATGLR3.6; F26O13.120; GLR3.6; glutamate receptor 3.6", "gene_names_refseq": "ATGLR3.6; GLR3.6; glutamate receptor 3.6", "protein_names_uniprotkb": "Glutamate receptor 3.6; Ligand-gated ion channel 3.6", "protein_names_refseq": "glutamate receptor 3.6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51480)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;11379626;12082126;14593172;23969459;27862469", "class_list": "", "function": "Glutamate-gated receptor that probably acts as a non-selective cation channel. Mediates leaf-to-leaf wound signaling. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells., [UniProtKB, PubMed]; Glutamate-gated receptor that probably acts as non-selective cation channel., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q9SD01", "ec_number_list": [], "go_molecular_function": "GO:0005262 calcium channel activity;GO:0015276 ligand-gated monoatomic ion channel activity;GO:0038023 signaling receptor activity;GO:0008066 glutamate receptor activity;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007267 cell-cell signaling;GO:0019722 calcium-mediated signaling;GO:0006816 calcium ion transport;GO:0006874 intracellular calcium ion homeostasis;GO:0009611 response to wounding", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84W41-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYG2-1", "uniprot_id": [ { "id": "GALAK_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYG2", "type": "external" } ], "mass": 45729.0, "length": 424, "protein_name": "Galacturonokinase", "gene_name": "GALAK", "organism": "Arabidopsis", "refseq_name": "galacturonic acid kinase", "refseq_ac": [ { "id": "NP_187681", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187681", "type": "external" } ], "gene_names_uniprotkb": "GALAK; F13M14.1 T7M13.22; GalAK; galacturonic acid kinase", "gene_names_refseq": "GalAK; galacturonic acid kinase", "protein_names_uniprotkb": "Galacturonokinase; 2.7.1.44; D-galacturonic acid-1-P kinase", "protein_names_refseq": "galacturonic acid kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10700)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;19509290;22223895;25561503;27862469", "class_list": "", "function": "Sugar-1-kinase with a strict substrate specificity for the alpha-anomeric configuration of D-galacturonic acid (D-GalA) and ATP. Involved in the biosynthesis of UDP-galacturonic acid (UDP-GalA) from the salvaged GalA that is released during growth-dependent cell wall restructuring., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAF7;Q9SG76", "ec_number_list": [ { "id": "2.7.1.44", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.44", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0047912 galacturonokinase activity;GO:0004335 galactokinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006012 galactose metabolic process;GO:0046835 carbohydrate phosphorylation;GO:0046396 D-galacturonate metabolic process;GO:0005996 monosaccharide metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VYG2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXD9-1", "uniprot_id": [ { "id": "SCO3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXD9", "type": "external" } ], "mass": 70365.0, "length": 644, "protein_name": "Protein SNOWY COTYLEDON 3", "gene_name": "SCO3", "organism": "Arabidopsis", "refseq_name": "SNOWY COTYLEDON protein (DUF566)", "refseq_ac": [ { "id": "NP_188591", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188591", "type": "external" } ], "gene_names_uniprotkb": "SCO3; MMB12.2; QWRF domain containing 1; QWRF1; SNOWY COTYLEDON 3", "gene_names_refseq": "QWRF domain containing 1; QWRF1; SCO3; SNOWY COTYLEDON 3", "protein_names_uniprotkb": "Protein SNOWY COTYLEDON 3; QWRF motif-containing protein 1", "protein_names_refseq": "SNOWY COTYLEDON protein (DUF566)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19570)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10907853;11130713;11910074;14593172;20978221;25561503;27862469", "class_list": "", "function": "Probable microtubule-associated peroxisomal protein required for chloroplast biogenesis and for the formation of the prolamellar body and prothylakoids in etioplasts. Not involved in peroxisomal metabolism, including mobilization of storage compounds during germination, fatty acid beta-oxydation or photorespiration., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EB40;Q9LJN9", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005874 microtubule;GO:0005880 nuclear microtubule", "go_biological_process": "GO:0051225 spindle assembly;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GXD9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZA0-1", "uniprot_id": [ { "id": "SIEL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZA0", "type": "external" } ], "mass": 104017.0, "length": 936, "protein_name": "Protein SIEL", "gene_name": "SIEL", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": [ { "id": "NP_187492", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187492", "type": "external" } ], "gene_names_uniprotkb": "SIEL; F17O14.27", "gene_names_refseq": "SHORT-ROOT interacting embryonic lethal; SIEL", "protein_names_uniprotkb": "Protein SIEL; Protein SHORT-ROOT INTERACTING EMBRYONIC LETHAL", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G08800)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;21924907;23294290;25124761;27862469", "class_list": "", "function": "Intracellular shuttle that promotes movement of SHR from the stele into the endodermis (PubMed:21924907). Required for SHR association to endosomes and localization, and for intercellular movement of SHR (PubMed:25124761)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C9Y0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0005938 cell cortex", "go_biological_process": "GO:0034472 snRNA 3'-end processing;GO:0010496 intercellular transport;GO:0090057 root radial pattern formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VZA0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L3W1-1", "uniprot_id": [ { "id": "VRN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L3W1", "type": "external" } ], "mass": 39275.0, "length": 341, "protein_name": "B3 domain-containing transcription factor VRN1", "gene_name": "VRN1", "organism": "Arabidopsis", "refseq_name": "AP2/B3-like transcriptional factor family protein", "refseq_ac": [ { "id": "NP_188529", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188529", "type": "external" } ], "gene_names_uniprotkb": "VRN1; K13E13.10; REM39; REPRODUCTIVE MERISTEM 39", "gene_names_refseq": "REDUCED VERNALIZATION RESPONSE 1; REM39; REPRODUCTIVE MERISTEM 39; VRN1", "protein_names_uniprotkb": "B3 domain-containing transcription factor VRN1; Protein VERNALIZATION 1", "protein_names_refseq": "AP2/B3-like transcriptional factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18990)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10907853;11130713;12114624;18986826;23255593;25561503;27862469", "class_list": "", "function": "Essential protein (PubMed:23255593). Involved in the regulation of vernalization (PubMed:12114624). Acts as a transcriptional repressor of FLC, a major target of the vernalization pathway (PubMed:12114624). Binds DNA in vitro in a non-sequence-specific manner (PubMed:12114624)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9LJ67", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009909 regulation of flower development;GO:0010048 vernalization response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L3W1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84LK0-1", "uniprot_id": [ { "id": "MSH1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84LK0", "type": "external" } ], "mass": 123920.0, "length": 1118, "protein_name": "DNA mismatch repair protein MSH1, mitochondrial", "gene_name": "MSH1", "organism": "Arabidopsis", "refseq_name": "MUTL protein homolog 1", "refseq_ac": [ { "id": "NP_189075", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189075", "type": "external" } ], "gene_names_uniprotkb": "MSH1; ATMSH1; CHLOROPLAST MUTATOR; CHM1; CHM; K7M2.9; MUTL protein homolog 1", "gene_names_refseq": "ATMSH1; CHLOROPLAST MUTATOR; CHM1; CHM; MSH1; MUTL protein homolog 1", "protein_names_uniprotkb": "DNA mismatch repair protein MSH1, mitochondrial; AtMSH1; MutS protein homolog 1; Protein CHLOROPLAST MUTATOR", "protein_names_refseq": "MUTL protein homolog 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24320)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10907853;11130713;12730382;1356535;16169894;16830098;19822729;20139171;22426777;27862469", "class_list": "", "function": "DNA mismatch repair protein specifically involved in maintenance of mitochondrial genome configuration by controlling specific rearranged portion. Functions by suppressing asymmetric recombination at some repeat pairs., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LK12", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0003690 double-stranded DNA binding;GO:0030983 mismatched DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009536 plastid;GO:0042651 thylakoid membrane", "go_biological_process": "GO:0006298 mismatch repair;GO:0009408 response to heat;GO:0043504 mitochondrial DNA repair;GO:0032042 mitochondrial DNA metabolic process;GO:1905951 mitochondrion DNA recombination", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q84LK0-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84R11-1", "uniprot_id": [ { "id": "CRSH_ARATH", "url": "https://www.uniprot.org/uniprot/Q84R11", "type": "external" } ], "mass": 66578.0, "length": 583, "protein_name": "Probable GTP diphosphokinase CRSH, chloroplastic", "gene_name": "CRSH", "organism": "Arabidopsis", "refseq_name": "Ca2+-activated RelA/spot-like protein", "refseq_ac": [ { "id": "NP_188374", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188374", "type": "external" } ], "gene_names_uniprotkb": "CRSH; ATCRSH; MKP6.2", "gene_names_refseq": "ATCRSH; CRSH; Ca2+-activated RelA/spot homolog", "protein_names_uniprotkb": "Probable GTP diphosphokinase CRSH, chloroplastic; 2.7.6.5; AtCRSH; Calcium-activated RelA/Spot homolog; ppGpp synthetase CRSH", "protein_names_refseq": "Ca2+-activated RelA/spot-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G17470)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10819329;11130713;14593172;18178586;18535838;27862469", "class_list": "", "function": "Possesses calcium-dependent ppGpp (guanosine 3'-diphosphate 5'-diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. Plays an important role in the timing adjustment of pistil and pollen maturation required for successful pollination. May be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LUQ0", "ec_number_list": [ { "id": "2.7.6.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.6.5", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0005525 GTP binding;GO:0005509 calcium ion binding;GO:0016301 kinase activity;GO:0008728 GTP diphosphokinase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0015969 guanosine tetraphosphate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84R11-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY57-1", "uniprot_id": [ { "id": "ARL8A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY57", "type": "external" } ], "mass": 20404.0, "length": 184, "protein_name": "ADP-ribosylation factor-like protein 8a", "gene_name": "ARL8A; ARLA1C", "organism": "Arabidopsis", "refseq_name": "ADP-ribosylation factor-like A1C", "refseq_ac": [ { "id": "NP_190556", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190556", "type": "external" } ], "gene_names_uniprotkb": "ARL8A; ARLA1C; ARLA1C; ATARLA1C; T16K5.220", "gene_names_refseq": "ADP-ribosylation factor-like A1C; ARLA1C; ATARLA1C", "protein_names_uniprotkb": "ADP-ribosylation factor-like protein 8a; ADP-ribosylation factor-like A1C; AtARL8a; AtARLA1C", "protein_names_refseq": "ADP-ribosylation factor-like A1C", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G49870)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12644670;14593172;15723828;22174675;27862469", "class_list": "", "function": "(Microbial infection) Component of tomato mosaic virus (ToMV) RNA replication complexes. Required for tobamovirus multiplication, especially for efficient negative-strand RNA synthesis and viral RNA capping., [UniProtKB, PubMed]; May play a role in lysosome motility. May play a role in chromosome segregation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2X1", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005819 spindle;GO:0005886 plasma membrane", "go_biological_process": "GO:0007059 chromosome segregation;GO:0015031 protein transport;GO:0051301 cell division;GO:0051607 defense response to virus", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VY57-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H116-1", "uniprot_id": [ { "id": "MNS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H116", "type": "external" } ], "mass": 65136.0, "length": 572, "protein_name": "Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2", "gene_name": "MNS2", "organism": "Arabidopsis", "refseq_name": "alpha-mannosidase 2", "refseq_ac": [ { "id": "NP_566675", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566675", "type": "external" } ], "gene_names_uniprotkb": "MNS2; ALPHA-MANNOSIDASE IA; MANIA; MSA6.31; alpha-mannosidase 2", "gene_names_refseq": "ALPHA-MANNOSIDASE IA; MANIA; MNS2; MSA6.31; alpha-mannosidase 2", "protein_names_uniprotkb": "Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2; 3.2.1.113; Alpha-mannosidase IA; AtMANIa", "protein_names_refseq": "alpha-mannosidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G21160)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;10907853;11130713;14593172;19914916;20023195;27862469", "class_list": "", "function": "Class I alpha-mannosidase essential for early N-glycan processing. Progressively trims alpha-1,2-linked mannose residues. Produces Man(5)GlcNAc(2) from Man(8)GlcNAc(2), but only Man(6)GlcNAc(2) from Man(9)GlcNAc(2). Has difficulty acting on the terminal mannose of the b-branch. Involved in root development and cell wall biosynthesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q94A04;Q9LJB6", "ec_number_list": [ { "id": "3.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.-", "type": "external" }, { "id": "3.2.1.113", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.113", "type": "external" }, { "id": "3.2.1.209", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.209", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0004559 alpha-mannosidase activity;GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0036503 ERAD pathway;GO:0006491 N-glycan processing", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8H116-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5W7-1", "uniprot_id": [ { "id": "PIF6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5W7", "type": "external" } ], "mass": 40547.0, "length": 363, "protein_name": "Transcription factor PIF6", "gene_name": "PIF6; PIL2", "organism": "Arabidopsis", "refseq_name": "phytochrome interacting factor 3-like 2", "refseq_ac": [ { "id": "NP_001078329", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078329", "type": "external" } ], "gene_names_uniprotkb": "PIF6; PIL2; BHLH132; EN111; PIF6; PIL2; T17J13.50", "gene_names_refseq": "PHYTOCHROME-INTERACTING FACTOR 6; PIF6; PIL2; phytochrome interacting factor 3-like 2", "protein_names_uniprotkb": "Transcription factor PIF6; AtbHLH132; Basic helix-loop-helix protein 132; Phytochrome interacting factor 3-like 2; Phytochrome-interacting factor 6; Transcription factor EN 111; bHLH 132; bHLH transcription factor bHLH132", "protein_names_refseq": "phytochrome interacting factor 3-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G62090)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;11828023;12679534;12826627;12897250;14600211;20093430;23708772;25944101;27862469", "class_list": "", "function": "Transcription factor., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A8MSC2;Q9M1R5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:1902074 response to salt;GO:0009737 response to abscisic acid;GO:0010017 red or far-red light signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8L5W7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5R3-1", "uniprot_id": [ { "id": "TBCD_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5R3", "type": "external" } ], "mass": 139916.0, "length": 1254, "protein_name": "Tubulin-folding cofactor D", "gene_name": "TFCD; TTN1", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": [ { "id": "NP_191633", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191633", "type": "external" } ], "gene_names_uniprotkb": "TFCD; TTN1; CHAMPIGNON; CHO; EMB133; EMBRYO DEFECTIVE 133; T4C21.150; TBCD; TFC D; TITAN 1; TTN1; TUBULIN FOLDING COFACTOR D", "gene_names_refseq": "CHAMPIGNON; CHO; EMB133; EMBRYO DEFECTIVE 133; TFC D; TITAN 1; TTN1; TUBULIN FOLDING COFACTOR D", "protein_names_uniprotkb": "Tubulin-folding cofactor D; AtTFCD; Protein CHAMPIGNON; Protein EMBRYO DEFECTIVE 133; Protein TITAN 1", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60740)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10099932;11130713;11788751;11959844;25561503;27862469;9807824", "class_list": "", "function": "Regulates microtubule function in seed development. Required for development of both embryo and endosperm tissue. Not essential for cell viability. Probably involved in the binding of beta-tubulin in the multimeric supercomplex., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZY9", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0015631 tubulin binding;GO:0048487 beta-tubulin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009506 plasmodesma", "go_biological_process": "GO:0006457 protein folding;GO:0000226 microtubule cytoskeleton organization;GO:0007021 tubulin complex assembly;GO:0007017 microtubule-based process;GO:0007023 post-chaperonin tubulin folding pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L5R3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWU3-1", "uniprot_id": [ { "id": "RVE8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWU3", "type": "external" } ], "mass": 32801.0, "length": 298, "protein_name": "Protein REVEILLE 8", "gene_name": "RVE8", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": [ { "id": "NP_001327351", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327351", "type": "external" } ], "gene_names_uniprotkb": "RVE8; F11F8.19; LCL5; LHY-CCA1-LIKE5; REVEILLE 8", "gene_names_refseq": "AT3G09610; LCL5; LHY-CCA1-LIKE5; REVEILLE 8; RVE8", "protein_names_uniprotkb": "Protein REVEILLE 8; MYB-like transcription factor RVE8; Protein LHY-CCA1-like 5", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G09600)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;14593172;19805390;21205033;21474993;21483796;22902701;23111157;23638299;25561503;27532006;27862469;35222493;38481435", "class_list": "", "function": "Transcriptional activator of evening element (EE)-containing clock-controlled genes (PubMed:23638299, PubMed:35222493). Forms a negative feedback loop with APRR5. Regulates the pattern of histone H3 acetylation of the TOC1 promoter. RVE4, RVE6 and RVE8 are components of the circadian system acting synergistically to regulate flowering time, redundantly to regulate leaf growth, and antagonistically to regulate hypocotyl elongation; their action seems independent of ZTL and HY5 (PubMed:38481435)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1I9LS15;Q6QAC9;Q9SF43", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0007623 circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8RWU3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXS6-1", "uniprot_id": [ { "id": "INO80_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXS6", "type": "external" } ], "mass": 172172.0, "length": 1507, "protein_name": "Chromatin-remodeling ATPase INO80", "gene_name": "INO80", "organism": "Arabidopsis", "refseq_name": "DNA helicase INO80-like protein", "refseq_ac": [ { "id": "NP_001319776", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319776", "type": "external" } ], "gene_names_uniprotkb": "INO80; ATINO80; F28O9.150; INO80 ORTHOLOG; INO80 ortholog", "gene_names_refseq": "ATINO80; INO80 ORTHOLOG; INO80 ortholog; INO80", "protein_names_uniprotkb": "Chromatin-remodeling ATPase INO80; 3.6.4.-; AtINO80; DNA helicase-related INO80 complex homolog 1", "protein_names_refseq": "DNA helicase INO80-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57300)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14593172;15525519;23572148;24265739;25561503;27862469;31418686", "class_list": "", "function": "ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair., [UniProtKB, UniProtKB, UniProtKB]; ATPase component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and DNA repair (By similarity). Binds DNA (By similarity). As part of the INO80 complex, remodels chromatin by shifting nucleosomes (By similarity). The INO80 complex controls ethylene-induced H2A.Z eviction dynamics (PubMed:31418686). Positive regulator of homologous recombination, but not an essential component of homologous recombination (PubMed:15525519). Not involved in the illegitimate repair pathway (PubMed:15525519)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2L7", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0042393 histone binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0031011 Ino80 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045739 positive regulation of DNA repair", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8RXS6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWG2-1", "uniprot_id": [ { "id": "CF107_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWG2", "type": "external" } ], "mass": 73471.0, "length": 652, "protein_name": "Protein high chlorophyll fluorescent 107", "gene_name": "HCF107", "organism": "Arabidopsis", "refseq_name": "high chlorophyll fluorescent 107", "refseq_ac": [ { "id": "NP_188329", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188329", "type": "external" } ], "gene_names_uniprotkb": "HCF107; K14A17.11; MBB1", "gene_names_refseq": "HCF107; high chlorophyll fluorescent 107", "protein_names_uniprotkb": "Protein high chlorophyll fluorescent 107", "protein_names_refseq": "high chlorophyll fluorescent 107", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G17040)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10819329;11130713;11549768;14593172;15505214;15918885;20466843;22451905;27862469;30833711", "class_list": "", "function": "Involved, directly or indirectly, in the processing of chloroplast encoded mRNAs. Exhibits sequence-specific RNA binding and RNA remodeling activities, probably leading to the activation of translation of the target gene cluster psbB-psbT-psbH-petB-petD (PubMed:22451905). Blocks 5'-3' and 3'-5' exoribonucleases (e.g. polynucleotide phosphorylase (PNPase), RNase R) in vitro (PubMed:22451905). Necessary for intercistronic RNA processing of the psbH 5' untranslated region or the stabilization of 5' processed psbH RNAs. Also required for the synthesis of psbB (PubMed:11549768, PubMed:15918885, PubMed:22451905)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LSP3", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003727 single-stranded RNA binding;GO:0008428 ribonuclease inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000325 plant-type vacuole;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006396 RNA processing;GO:0006397 mRNA processing;GO:0006417 regulation of translation;GO:0010114 response to red light;GO:0009657 plastid organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8RWG2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZJ0-1", "uniprot_id": [ { "id": "SIA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZJ0", "type": "external" } ], "mass": 54216.0, "length": 474, "protein_name": "Sialyltransferase-like protein 1", "gene_name": "MGP2; SIA1", "organism": "Arabidopsis", "refseq_name": "MALE GAMETOPHYTE DEFECTIVE 2", "refseq_ac": [ { "id": "NP_850940", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850940", "type": "external" } ], "gene_names_uniprotkb": "MGP2; SIA1; F22O13.14; F22O13_14; MALE GAMETOPHYTE DEFECTIVE 2; MGP2; SIA1; sialyltransferase-like 1", "gene_names_refseq": "F22O13.14; F22O13_14; MALE GAMETOPHYTE DEFECTIVE 2; MGP2; SIA1; sialyltransferase-like 1", "protein_names_uniprotkb": "Sialyltransferase-like protein 1; 2.4.-.-; Protein MALE GAMETOPHYTE DEFECTIVE 2", "protein_names_refseq": "MALE GAMETOPHYTE DEFECTIVE 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08660)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;20738727;24905498;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Required for normal pollen grain germination and pollen tube growth. May not be required for pollen development and female gametophytic function., [UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9FRR9", "ec_number_list": [], "go_molecular_function": "GO:0008373 sialyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0009846 pollen germination;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VZJ0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWV8-1", "uniprot_id": [ { "id": "U1165_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWV8", "type": "external" } ], "mass": 48712.0, "length": 442, "protein_name": "U11/U12 small nuclear ribonucleoprotein 65 kDa protein", "gene_name": "SNRNP65; U12-65K", "organism": "Arabidopsis", "refseq_name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "refseq_ac": [ { "id": "NP_172394", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172394", "type": "external" } ], "gene_names_uniprotkb": "SNRNP65; U12-65K; T12M4.6; T12M4_6", "gene_names_refseq": "T12M4.6; T12M4_6; U11/U12-65K", "protein_names_uniprotkb": "U11/U12 small nuclear ribonucleoprotein 65 kDa protein; U11/U12 snRNP 65 kDa protein; U11/U12-65K", "protein_names_refseq": "RNA-binding (RRM/RBD/RNP motifs) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09230)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;15987817;19423640;23660473;23776212;24606192;25561503;27862469", "class_list": "", "function": "Component of minor spliceosome required for U12-type intron splicing and alternative splicing of many introns. Binds specifically to U12 snRNA, which is necessary for branch-point site recognition. Required for normal plant development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2T6;O80484", "ec_number_list": [], "go_molecular_function": "GO:0097157 pre-mRNA intronic binding;GO:0030626 U12 snRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005689 U12-type spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome;GO:0010229 inflorescence development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RWV8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYD9-1", "uniprot_id": [ { "id": "SDE3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYD9", "type": "external" } ], "mass": 113363.0, "length": 1002, "protein_name": "Probable RNA helicase SDE3", "gene_name": "SDE3", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_172037", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172037", "type": "external" } ], "gene_names_uniprotkb": "SDE3; SILENCING DEFECTIVE; T25N20.11; T25N20.26; T25N20_11", "gene_names_refseq": "SDE3; SILENCING DEFECTIVE; T25N20.11; T25N20_11", "protein_names_uniprotkb": "Probable RNA helicase SDE3; 5.6.2.-; Silencing defective protein 3", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G05460)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;11296239;11495769;11910074;12941703;18463617;20466843;21768351;22940249;23572148;24265739;25561503;26187819;27862469;30833711", "class_list": "", "function": "Probable RNA helicase required for post-transcriptional gene silencing (PTGS), a process that provides protection in plants against virus infection and can suppress expression of transgenes. Plays a central role in RNA interference (RNAi) process, a process that mediates mRNA destruction of translational repression. Required for the assembly of the RISC complex, a complex required for target RNA destruction or repression. May be required in the RISC assembly to unwind miRNAs, in the production of single-stranded miRNA from the double-stranded miRNA, a key step in RISC formation. Involved in the amplification of sense-PTGS (S-PTGS), leading to siRNA production. Required for the maintenance but not the initiation of tobacco rattle virus (TRV)-mediated silencing, probably by mediating/maintaining DNA methylation and chromatin-based transcriptional gene silencing at some genomic locations., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q94KS1;Q9LR48", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity;GO:0032574 5'-3' RNA helicase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0043186 P granule", "go_biological_process": "GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing;GO:0009616 RNAi-mediated antiviral immune response;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8GYD9-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY06-1", "uniprot_id": [ { "id": "PREP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY06", "type": "external" } ], "mass": 121131.0, "length": 1080, "protein_name": "Presequence protease 2, chloroplastic/mitochondrial", "gene_name": "PREP2", "organism": "Arabidopsis", "refseq_name": "presequence protease 2", "refseq_ac": [ { "id": "NP_175386", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175386", "type": "external" } ], "gene_names_uniprotkb": "PREP2; ATPREP2; F14J22.13; F14J22_13; ZNMP2; presequence protease 2", "gene_names_refseq": "ATPREP2; F14J22.13; F14J22_13; PREP2; presequence protease 2", "protein_names_uniprotkb": "Presequence protease 2, chloroplastic/mitochondrial; 3.4.24.-; AtPreP2; AtZnMP2; PreP 2; Zinc metalloprotease 2", "protein_names_refseq": "presequence protease 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49630)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12138166;14593172;15827031;15893767;27862469", "class_list": "", "function": "ATP-independent protease that degrades both mitochondrial and chloroplastic transit peptides after their cleavage. Also degrades other unstructured peptides. Specific for peptides in the range of 10 to 65 residues. Shows a preference for cleavage after small polar residues and before basic residues, but without any positional preference., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FX91", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding;GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0016485 protein processing;GO:0051603 proteolysis involved in protein catabolic process;GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VY06-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LEK2-1", "uniprot_id": [ { "id": "TVP23_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LEK2", "type": "external" } ], "mass": 21238.0, "length": 186, "protein_name": "Golgi apparatus membrane protein-like protein ECHIDNA", "gene_name": "ECH", "organism": "Arabidopsis", "refseq_name": "golgi apparatus membrane protein-like protein ECHIDNA protein", "refseq_ac": [ { "id": "NP_563842", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563842", "type": "external" } ], "gene_names_uniprotkb": "ECH; ECHIDNA; T31J12.5; T31J12_5", "gene_names_refseq": "ECHIDNA; ECH; T31J12.5; T31J12_5", "protein_names_uniprotkb": "Golgi apparatus membrane protein-like protein ECHIDNA", "protein_names_refseq": "golgi apparatus membrane protein-like protein ECHIDNA protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09330)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;21512130;22223895;23832588;27862469", "class_list": "", "function": "Golgi membrane protein involved in vesicular trafficking., [UniProtKB, UniProtKB]; Mediates trans-Golgi-network trafficking and cell elongation (PubMed:21512130, PubMed:23832588). Required for keeping the appropriate balance between secretory trafficking and vacuolar targeting of a subset of proteins (PubMed:21512130). The ECH/YIP4 complex is involved in the modulation of the trans-Golgi network (TGN)-mediated trafficking of some proteins and cell wall components (e.g. pectin and hemicellulose) to the cell wall in dark-grown hypocotyls and in secretory cells of the seed coat (PubMed:23832588)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178WGW7;Q0WRM9;Q9ZPZ2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0032588 trans-Golgi network membrane", "go_biological_process": "GO:0007034 vacuolar transport;GO:0016192 vesicle-mediated transport;GO:0009306 protein secretion;GO:0007030 Golgi organization;GO:0009826 unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LEK2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWL2-1", "uniprot_id": [ { "id": "CDPKT_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWL2", "type": "external" } ], "mass": 60493.0, "length": 534, "protein_name": "Calcium-dependent protein kinase 29", "gene_name": "CPK29", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 29", "refseq_ac": [ { "id": "NP_001319387", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319387", "type": "external" } ], "gene_names_uniprotkb": "CPK29; T4O12.25; T4O12_25", "gene_names_refseq": "CPK29; T4O12.25; T4O12_25; calcium-dependent protein kinase 29", "protein_names_uniprotkb": "Calcium-dependent protein kinase 29; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 29", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G76040)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;12068094;12805596;14593172;18686298;23111157;25561503;27419465;27862469", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I0S0;Q9LQR4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RWL2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXJ4-1", "uniprot_id": [ { "id": "GLR34_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXJ4", "type": "external" } ], "mass": 107207.0, "length": 959, "protein_name": "Glutamate receptor 3.4", "gene_name": "GLR3.4; GLR34", "organism": "Arabidopsis", "refseq_name": "glutamate receptor 3.4", "refseq_ac": [ { "id": "NP_001030971", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030971", "type": "external" } ], "gene_names_uniprotkb": "GLR3.4; GLR34; ATGLR3.4; GLR3.4; GLR4; GLUR3; YUP8H12.19; YUP8H12_19; glutamate receptor 3.4", "gene_names_refseq": "ATGLR3.4; GLR3.4; GLUR3; LIGAND-GATED CHANNEL-LIKE PROTEIN PRECURSOR; YUP8H12.19; YUP8H12_19; glutamate receptor 3.4", "protein_names_uniprotkb": "Glutamate receptor 3.4; AtGLR3.4; Glutamate receptor-like protein 3.4; Ligand-gated ion channel 3.4", "protein_names_refseq": "glutamate receptor 3.4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G05200)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;11379626;11910074;12082126;15864638;18162597;21110940;22447719;23590882;25561503;27862469;29432559", "class_list": "", "function": "Glutamate-gated receptor that probably acts as a non-selective cation channel, at least in hypocotyls (Probable). Can be triggered by Asn, Ser, Gly and, to a lower extent, Ala, Cys and Glu (PubMed:18162597, PubMed:22447719). May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells (Probable). Plays an important role in the calcium-based fast transmission of environmental stress (PubMed:15864638). Acts as a negative regulator of lateral root initiation and development (PubMed:23590882). May restrict primordia numbers and position along the root axis by a signaling process originating in the phloem (PubMed:23590882). AtGLR3.4-mediated cytosolic calcium influx may be involved in the regulation of seed germination under salt stress by modulating sodium accumulation through the SOS pathway (PubMed:29432559)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]; Glutamate-gated receptor that probably acts as non-selective cation channel., [UniProtKB, UniProtKB]", "predicted_glycosites": 8, "predicted_n_glycosites": 7, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 2, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 2, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 2, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "O23048;Q8LGM9;Q9SWD9", "ec_number_list": [], "go_molecular_function": "GO:0005262 calcium channel activity;GO:0015276 ligand-gated monoatomic ion channel activity;GO:0038023 signaling receptor activity;GO:0008066 glutamate receptor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0070417 cellular response to cold;GO:0019722 calcium-mediated signaling;GO:0006816 calcium ion transport;GO:0006874 intracellular calcium ion homeostasis;GO:0009611 response to wounding", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8GXJ4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.1000000011001.101.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LEE7-1", "uniprot_id": [ { "id": "AOX3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LEE7", "type": "external" } ], "mass": 36202.0, "length": 318, "protein_name": "Ubiquinol oxidase 3, mitochondrial", "gene_name": "AOX1D; AOX3", "organism": "Arabidopsis", "refseq_name": "alternative oxidase 1D", "refseq_ac": [ { "id": "NP_564395", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564395", "type": "external" } ], "gene_names_uniprotkb": "AOX1D; AOX3; AOX1D; F27G20.12; F27G20_12; F5D14.11; alternative oxidase 1D", "gene_names_refseq": "AOX1D; F27G20.12; alternative oxidase 1D", "protein_names_uniprotkb": "Ubiquinol oxidase 3, mitochondrial; 1.10.3.11; Alternative oxidase 3", "protein_names_refseq": "alternative oxidase 1D", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32350)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;16859634;19825614;21814799;23776212;25732537;27862469", "class_list": "", "function": "Catalyzes the cyanide-resistant oxidation of ubiquinol and the reduction of molecular oxygen to water, but does not translocate protons and consequently is not linked to oxidative phosphorylation. May increase respiration when the cytochrome respiratory pathway is restricted, or in response to low temperatures (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VY45;Q9C612;Q9LQM4", "ec_number_list": [ { "id": "1.10.3.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.10.3.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0106292 superoxide-generating NADPH oxidase activity;GO:0009916 alternative oxidase activity;GO:0102721 ubiquinol:oxygen oxidoreductase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0098803 respiratory chain complex", "go_biological_process": "GO:0022904 respiratory electron transport chain;GO:0010230 alternative respiration", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LEE7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXX0-1", "uniprot_id": [ { "id": "ERV1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXX0", "type": "external" } ], "mass": 21600.0, "length": 191, "protein_name": "FAD-linked sulfhydryl oxidase ERV1", "gene_name": "ERV1", "organism": "Arabidopsis", "refseq_name": "Erv1/Alr family protein", "refseq_ac": [ { "id": "NP_564557", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564557", "type": "external" } ], "gene_names_uniprotkb": "ERV1; AtErv1; EMB3106; EMBRYO DEFECTIVE 3106; Erv1; F10F5.3; F10F5_3", "gene_names_refseq": "AtErv1; EMB3106; EMBRYO DEFECTIVE 3106; Erv1; F10F5.3; F10F5_3", "protein_names_uniprotkb": "FAD-linked sulfhydryl oxidase ERV1; 1.8.3.2; AtErv1; Mitochondrial sulfhydryl oxidase ERV1", "protein_names_refseq": "Erv1/Alr family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49880)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11910074;14593172;14996837;16893552;19017646;20829360;27862469;29117860;38001802", "class_list": "", "function": "FAD-dependent sulfhydryl oxidase that catalyzes disulfide bond formation (PubMed:14996837, PubMed:16893552). Oxidizes thioredoxin in vitro (PubMed:14996837, PubMed:16893552). Required for the import and folding of small cysteine-containing proteins in the mitochondrial intermembrane space, and can act independently of the oxidoreductase MIA40 (PubMed:29117860, PubMed:38001802). Can oxidize the cytochrome c oxidase assembly protein COX19, a typical substrate of MIA40 (PubMed:38001802)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LC15;Q9C6C6", "ec_number_list": [ { "id": "1.8.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.3.2", "type": "external" } ], "go_molecular_function": "GO:0042802 identical protein binding;GO:0050660 flavin adenine dinucleotide binding;GO:0016971 flavin-dependent sulfhydryl oxidase activity;GO:0016972 thiol oxidase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GXX0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDN8-1", "uniprot_id": [ { "id": "UGE3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDN8", "type": "external" } ], "mass": 38910.0, "length": 351, "protein_name": "Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3", "gene_name": "UGE3", "organism": "Arabidopsis", "refseq_name": "UDP-D-glucose/UDP-D-galactose 4-epimerase 3", "refseq_ac": [ { "id": "NP_564811", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564811", "type": "external" } ], "gene_names_uniprotkb": "UGE3; F16M19.8; F16M19_8", "gene_names_refseq": "F16M19.8; F16M19_8; UDP-D-glucose/UDP-D-galactose 4-epimerase 3; UGE3", "protein_names_uniprotkb": "Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3; 5.1.3.2; 5.1.3.5; AtUGE3; UDP-D-xylose 4-epimerase; UDP-L-arabinose 4-epimerase; UDP-galactose 4-epimerase 3; UDP-glucose 4-epimerase 3", "protein_names_refseq": "UDP-D-glucose/UDP-D-galactose 4-epimerase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63180)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11554483;11910074;12419184;14973160;16644739;17496119;19754426;27862469", "class_list": "", "function": "Catalyzes the interconversion between UDP-glucose and UDP-galactose and the interconversion between UDP-arabinose and UDP-xylose. Cooperates with UGE2 in pollen development. May preferentially act in the UDP-galactose to UDP-glucose direction, therefore displaying a role in carbohydrate catabolism (Probable)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAM5", "ec_number_list": [ { "id": "5.1.3.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.3.5", "type": "external" }, { "id": "5.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.3.2", "type": "external" }, { "id": "5.1.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.3.-", "type": "external" } ], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0003978 UDP-glucose 4-epimerase activity;GO:0050373 UDP-arabinose 4-epimerase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0005996 monosaccharide metabolic process;GO:0006012 galactose metabolic process;GO:0071555 cell wall organization;GO:0009555 pollen development;GO:0033358 UDP-L-arabinose biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LDN8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX78-1", "uniprot_id": [ { "id": "UBN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX78", "type": "external" } ], "mass": 76330.0, "length": 684, "protein_name": "Ubinuclein-1", "gene_name": "UBN1", "organism": "Arabidopsis", "refseq_name": "wound-responsive family protein", "refseq_ac": [ { "id": "NP_173580", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173580", "type": "external" } ], "gene_names_uniprotkb": "UBN1; F24J8.24; F8K7.2; Ubinuclein 1", "gene_names_refseq": "F24J8.24; UBN1; Ubinuclein 1", "protein_names_uniprotkb": "Ubinuclein-1; AtUBN1; Ubiquitously expressed nuclear protein 1", "protein_names_refseq": "wound-responsive family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G21610)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;22060019;25086063;25600486;27862469", "class_list": "", "function": "May be required for replication-independent chromatin assembly., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9XI18", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0030875 rDNA protrusion", "go_biological_process": "GO:0034728 nucleosome organization;GO:0006325 chromatin organization;GO:0009651 response to salt stress;GO:0045814 negative regulation of gene expression, epigenetic", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RX78-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWA7-1", "uniprot_id": [ { "id": "MCD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWA7", "type": "external" } ], "mass": 39416.0, "length": 349, "protein_name": "Protein MULTIPLE CHLOROPLAST DIVISION SITE 1", "gene_name": "MCD1", "organism": "Arabidopsis", "refseq_name": "multiple chloroplast division site 1", "refseq_ac": [ { "id": "NP_173507", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173507", "type": "external" } ], "gene_names_uniprotkb": "MCD1; F2D10.35; F2D10_35", "gene_names_refseq": "F2D10.35; F2D10_35; MCD1; MULTIPLE CHLOROPLAST DIVISION SITE 1", "protein_names_uniprotkb": "Protein MULTIPLE CHLOROPLAST DIVISION SITE 1", "protein_names_refseq": "multiple chloroplast division site 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20830)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11910074;14593172;19135368;23936263;27862469;29967285", "class_list": "", "function": "Required for chloroplast division (PubMed:23936263, PubMed:29967285). Together with MIND1 and ARC3, regulates FtsZ ring positioning in chloroplasts in an ARC6-dependent manner (PubMed:29967285). Determines the site of chloroplast division in concert with MIND1 (PubMed:29967285). Not directly involved in ring formation, but required for MIND1 and MINE1 localization to regulate FtsZ ring formation during plastidial constriction (PubMed:29967285)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LM68", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009570 chloroplast stroma;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope;GO:0031972 chloroplast intermembrane space", "go_biological_process": "GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GWA7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7R3-1", "uniprot_id": [ { "id": "LPCT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7R3", "type": "external" } ], "mass": 44713.0, "length": 398, "protein_name": "Lysophospholipid acyltransferase LPEAT1", "gene_name": "LPEAT1", "organism": "Arabidopsis", "refseq_name": "Phospholipid/glycerol acyltransferase family protein", "refseq_ac": [ { "id": "NP_565249", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565249", "type": "external" } ], "gene_names_uniprotkb": "LPEAT1; F23A5.31; F23A5_31", "gene_names_refseq": "F23A5.31; F23A5_31", "protein_names_uniprotkb": "Lysophospholipid acyltransferase LPEAT1; 2.3.1.23; 2.3.1.51; 2.3.1.n6; 2.3.1.n7; AtLPEAT1; Lysophosphatidylethanolamine acyltransferase 1", "protein_names_refseq": "Phospholipid/glycerol acyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80950)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;14593172;18433157;18463617;19245862;19376835;19445718;20466843;21768351;22923678;23111157;25561503;27862469;28011693;28408542;30833711", "class_list": "", "function": "Possesses acyl-CoA-dependent lysophospholipid acyltransferase activity with a subset of lysophospholipids as substrates (PubMed:19445718, PubMed:28408542). Exhibits strong acylation activity on lysophosphatidylethanolamine (LPE) and lysophosphatidate (LPA), and lower activity on lysophosphatidylcholine (LPC) and lysophosphatidylserine (LPS) (PubMed:19445718). Exhibits acylation activity on both LPE and LPC (PubMed:28408542). Has a preference for 18:1-LPE over 16:0-LPE as acceptor (PubMed:19445718). Palmitoyl-CoA (16:0-CoA) is a better acyl donor than oleoyl-CoA (18:1-CoA) (PubMed:19445718, PubMed:28408542). Among several different acyl-CoA species the best acyl donor is palmitoyl-CoA (16:0-CoA) (PubMed:28408542). Activity is calcium-independent (PubMed:19445718). Its activity is essential for maintaining adequate levels of phosphatidylethanolamine (PE), LPE and LPC in the cells, which is crucial for plant growth regulation (PubMed:28408542)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LG31;Q9SAG5", "ec_number_list": [ { "id": "2.3.1.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.23", "type": "external" }, { "id": "2.3.1.n6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n6", "type": "external" }, { "id": "2.3.1.n7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n7", "type": "external" }, { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" }, { "id": "2.3.1.51", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.51", "type": "external" }, { "id": "2.3.1.n4", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n4", "type": "external" } ], "go_molecular_function": "GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity;GO:0042171 lysophosphatidic acid acyltransferase activity;GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity;GO:0071617 lysophospholipid acyltransferase activity;GO:0106262 1-acylglycerophosphoethanolamine O-acyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0016020 membrane", "go_biological_process": "GO:0000038 very long-chain fatty acid metabolic process;GO:0006644 phospholipid metabolic process;GO:0008654 phospholipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8L7R3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LBC0-1", "uniprot_id": [ { "id": "CCT13_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LBC0", "type": "external" } ], "mass": 36762.0, "length": 317, "protein_name": "Cyclin-T1-3", "gene_name": "CYCT1-3; CYCT1", "organism": "Arabidopsis", "refseq_name": "cyclin T 1;3", "refseq_ac": [ { "id": "NP_001321314", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321314", "type": "external" } ], "gene_names_uniprotkb": "CYCT1-3; CYCT1; CYCT1:3; CYCT; T17H3.12; T22C5.7; T22C5.8; cyclin T 1:3", "gene_names_refseq": "3; CYCT1; T22C5.8; cyclin T 1", "protein_names_uniprotkb": "Cyclin-T1-3; 3; CycT1", "protein_names_refseq": "3; cyclin T 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27630)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11910074;12678503;14593172;15208425;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SFZ4;Q9SFZ5;Q9SXC3", "ec_number_list": [], "go_molecular_function": "GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity;GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0008024 cyclin/CDK positive transcription elongation factor complex", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0051301 cell division;GO:0032786 positive regulation of DNA-templated transcription, elongation;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LBC0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JG5-1", "uniprot_id": [ { "id": "HLL_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JG5", "type": "external" } ], "mass": 21160.0, "length": 196, "protein_name": "Large ribosomal subunit protein uL14my", "gene_name": "HLL", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein L14p/L23e family protein", "refseq_ac": [ { "id": "NP_173200", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173200", "type": "external" } ], "gene_names_uniprotkb": "HLL; F1L3.27; F1L3_27; HUELLENLOS", "gene_names_refseq": "F1L3.27; F1L3_27; HLL; HUELLENLOS", "protein_names_uniprotkb": "Large ribosomal subunit protein uL14my; 50S ribosomal protein HLL, mitochondrial; Protein HUELLENLOS", "protein_names_refseq": "Ribosomal protein L14p/L23e family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17560)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11752383;14593172;22914576;27862469;36423343;9636071", "class_list": "", "function": "Binds to 23S rRNA in mitochondrion (By similarity). Required for the formation of the proximal region of the ovule primordium during floral organogenesis, thus participating in patterning and growth of ovule. Also regulates the initiation and/or maintenance of integument and embryo sac ontogenesis. Prevents inappropriate cell death in the young ovule., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LC24;Q8W1X5;Q9LNP8", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome;GO:0070180 large ribosomal subunit rRNA binding", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006412 translation;GO:0009741 response to brassinosteroid;GO:0009553 embryo sac development;GO:0048481 plant ovule development;GO:0080060 integument development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84JG5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GY89-1", "uniprot_id": [ { "id": "SRX_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GY89", "type": "external" } ], "mass": 13914.0, "length": 125, "protein_name": "Sulfiredoxin, chloroplastic/mitochondrial", "gene_name": "SRX", "organism": "Arabidopsis", "refseq_name": "sulfiredoxin", "refseq_ac": [ { "id": "NP_001077637", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077637", "type": "external" } ], "gene_names_uniprotkb": "SRX; ATSRX; F28K20.12; F28K20_12; SULFIREDOXIN; sulfiredoxin", "gene_names_refseq": "ATSRX; F28K20.12; F28K20_12; SRX; SULFIREDOXIN; sulfiredoxin", "protein_names_uniprotkb": "Sulfiredoxin, chloroplastic/mitochondrial; 1.8.98.2; AtSRX", "protein_names_refseq": "sulfiredoxin", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31170)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11910074;14593172;17217469;20176891;21139087;27862469", "class_list": "", "function": "Contributes to oxidative stress resistance by reducing cysteine-sulfinic acid formed under exposure to oxidants in a peroxiredoxin. May catalyze the reduction in a multi-step process by acting both as a specific phosphotransferase and a thioltransferase. Required to switch on the antioxidant pathway to regenerate the oxidative damage. In mitochondrion, catalyzes the retroreduction of the inactive sulfinic form of atypical Prx IIF using thioredoxin as reducing agent., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MS24;Q8LC51;Q9SA12", "ec_number_list": [ { "id": "1.8.98.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.98.2", "type": "external" } ], "go_molecular_function": "GO:0016667 oxidoreductase activity, acting on a sulfur group of donors;GO:0005524 ATP binding;GO:0032542 sulfiredoxin activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0034599 cellular response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GY89-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L3R3-1", "uniprot_id": [ { "id": "RFL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L3R3", "type": "external" } ], "mass": 101445.0, "length": 885, "protein_name": "Disease resistance protein RFL1", "gene_name": "RFL1", "organism": "Arabidopsis", "refseq_name": "RPS5-like 1", "refseq_ac": [ { "id": "NP_172685", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172685", "type": "external" } ], "gene_names_uniprotkb": "RFL1; RPS5-like 1; T28K15.6; T28K15_6", "gene_names_refseq": "RFL1; RPS5-like 1; T28K15.6; T28K15_6", "protein_names_uniprotkb": "Disease resistance protein RFL1; RPS5-like protein 1; pNd13/pNd14", "protein_names_refseq": "RPS5-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12210)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;12172007;27862469;9724691", "class_list": "", "function": "Disease resistance (R) protein., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04667;O04669;O81401;Q8L3Y7;Q8L4E2;Q8LGP3;Q8LGP4;Q8LGP7;Q8LGP8;Q8LGP9;Q8LGQ0", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0043531 ADP binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0098542 defense response to other organism;GO:0009617 response to bacterium;GO:0006952 defense response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8L3R3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WW6-1", "uniprot_id": [ { "id": "ASHH1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WW6", "type": "external" } ], "mass": 55285.0, "length": 492, "protein_name": "Histone-lysine N-methyltransferase ASHH1", "gene_name": "ASHH1", "organism": "Arabidopsis", "refseq_name": "SET domain group 26", "refseq_ac": [ { "id": "NP_177797", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177797", "type": "external" } ], "gene_names_uniprotkb": "ASHH1; ASH1 RELATED PROTEIN 1; ASH1-RELATED PROTEIN 1; F28O16.8; F28O16_8; SDG26; SET domain group 26; SET26", "gene_names_refseq": "ASH1 RELATED PROTEIN 1; ASH1-RELATED PROTEIN 1; ASHH1; F28O16.8; F28O16_8; SDG26; SET domain group 26", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase ASHH1; 2.1.1.354; ASH1 homolog 1; Protein SET DOMAIN GROUP 26", "protein_names_refseq": "SET domain group 26", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G76710)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;11691919;14593172;19245862;20466843;23111157;23328941;23572148;23660473;23776212;25409787;25561503;27862469;30833711", "class_list": "", "function": "Histone methyltransferase involved in regulation of flowering time. Required for the expression of the SOC1/AGL20 gene. Required for histone H3 trimethylation on 'Lys-4' (H3K4me3) at the SOC1 locus. Prevents trimethylation on 'Lys-27' (H3K27me3) at the same locus., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "C0SV35;Q945S9;Q9SRE2", "ec_number_list": [ { "id": "2.1.1.357", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.357", "type": "external" }, { "id": "2.1.1.354", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.354", "type": "external" }, { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0042054 histone methyltransferase activity;GO:0046975 histone H3K36 methyltransferase activity;GO:0140999 histone H3K4 trimethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region;GO:0000785 chromatin;GO:0005694 chromosome", "go_biological_process": "GO:0006281 DNA repair;GO:0006355 regulation of DNA-templated transcription;GO:0032259 methylation;GO:0010224 response to UV-B;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q84WW6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84W55-1", "uniprot_id": [ { "id": "IP5PF_ARATH", "url": "https://www.uniprot.org/uniprot/Q84W55", "type": "external" } ], "mass": 121711.0, "length": 1101, "protein_name": "Type II inositol polyphosphate 5-phosphatase 15", "gene_name": "FRA3; IP5P15", "organism": "Arabidopsis", "refseq_name": "Endonuclease/exonuclease/phosphatase family protein", "refseq_ac": [ { "id": "NP_176736", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176736", "type": "external" } ], "gene_names_uniprotkb": "FRA3; IP5P15; F5I14.11; F5I14_11; FRA3; FRAGILE FIBER3", "gene_names_refseq": "F5I14.11; F5I14_11; FRA3; FRAGILE FIBER3", "protein_names_uniprotkb": "Type II inositol polyphosphate 5-phosphatase 15; 3.1.3.36; 3.1.3.86; At5PTase15; Protein FRAGILE FIBER 3", "protein_names_refseq": "Endonuclease/exonuclease/phosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11402208;14593172;15539468;20466843;25561503;27862469", "class_list": "", "function": "Has phosphatase activity toward PtdIns(4,5)P2, PtdIns(3,4,5)P3 and Ins(1,4,5)P3. Has a higher substrate affinity toward PtdIns(4,5)P2. Required for secondary wall synthesis and actin organization in fiber cells., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04475;Q5MK18;Q9XFT1", "ec_number_list": [ { "id": "3.1.3.56", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.56", "type": "external" }, { "id": "3.1.3.86", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.86", "type": "external" }, { "id": "3.1.3.36", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.36", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity;GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0046856 phosphatidylinositol dephosphorylation;GO:0009846 pollen germination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84W55-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L627-1", "uniprot_id": [ { "id": "SRD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L627", "type": "external" } ], "mass": 43527.0, "length": 375, "protein_name": "snRNA-activating protein complex subunit", "gene_name": "SRD2", "organism": "Arabidopsis", "refseq_name": "snRNA activating complex family protein", "refseq_ac": [ { "id": "NP_001117373", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117373", "type": "external" } ], "gene_names_uniprotkb": "SRD2; F1K23.20; F3M18.1", "gene_names_refseq": "F3M18.1; SHOOT REDIFFERENTIATION DEFECTIVE 2; SRD2", "protein_names_uniprotkb": "snRNA-activating protein complex subunit; Protein SHOOT REDIFFERENTIATION DEFECTIVE 2; SNAPc subunit", "protein_names_refseq": "snRNA activating complex family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28560)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;12232244;12881506;14593172;16098103;18064403;20965997;27862469;9389671", "class_list": "", "function": "Transcription activator of small-nuclear RNA genes (snRNA), which have essential roles in pre-mRNA splicing and rRNA processing. Essential protein involved in the establishment of apical meristems and organ primordia, embryogenesis, cell differentiation and cell proliferation, probably by modulating the establishment of auxin gradients. Participates in the control of competence in cell proliferation; required for the reinitiation of the progression of the cell cycle and subsequent cell proliferation during cell redifferentiation leading to callus formation, especially during the first day of dedifferentiation (e.g. callus, root and shoot formation from root and hypocotyl explants)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HY74;Q9S7F0", "ec_number_list": [], "go_molecular_function": "GO:0003681 bent DNA binding;GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0019185 snRNA-activating protein complex", "go_biological_process": "GO:0009301 snRNA transcription;GO:0043697 cell dedifferentiation;GO:0042795 snRNA transcription by RNA polymerase II;GO:0042796 snRNA transcription by RNA polymerase III;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L627-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY15-1", "uniprot_id": [ { "id": "RBM25_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY15", "type": "external" } ], "mass": 101497.0, "length": 899, "protein_name": "RNA-binding motif protein 25", "gene_name": "RBM25", "organism": "Arabidopsis", "refseq_name": "splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein", "refseq_ac": [ { "id": "NP_176226", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176226", "type": "external" } ], "gene_names_uniprotkb": "RBM25; T13D8.10; T13D8.9; T13D8_9", "gene_names_refseq": "T13D8.9; T13D8_9", "protein_names_uniprotkb": "RNA-binding motif protein 25", "protein_names_refseq": "splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60200)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "11130712;14593172;19376835;19423640;20466843;23111157;23172892;23328941;23572148;23660473;23776212;24043427;24601666;25561503;26091701;26187819;26404089;27532006;27862469;28971960;29167316;29654922;30833711", "class_list": "", "function": "RNA-binding protein that acts as a regulator of alternative pre-mRNA splicing (PubMed:26404089, PubMed:28971960). Negative regulator of responses to abscisic acid (ABA), including in early development (PubMed:26404089)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 17, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFB3;O80743;O80744", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0009414 response to water deprivation;GO:0048024 regulation of mRNA splicing, via spliceosome;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q8VY15-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWT8-1", "uniprot_id": [ { "id": "SYSM_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWT8", "type": "external" } ], "mass": 57352.0, "length": 514, "protein_name": "Serine--tRNA ligase, chloroplastic/mitochondrial", "gene_name": "OVA7; SRS", "organism": "Arabidopsis", "refseq_name": "Seryl-tRNA synthetase", "refseq_ac": [ { "id": "NP_172651", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172651", "type": "external" } ], "gene_names_uniprotkb": "OVA7; SRS; ATSRS; F12F1.29; F12F1_29; OVA7; SERYL-TRNA SYNTHETASE; Seryl-tRNA synthetase; ovule abortion 7", "gene_names_refseq": "ATSRS; F12F1.29; F12F1_29; OVA7; SERYL-TRNA SYNTHETASE; SRS; Seryl-tRNA synthetase; ovule abortion 7", "protein_names_uniprotkb": "Serine--tRNA ligase, chloroplastic/mitochondrial; 6.1.1.11; AtSRS; Protein OVULE ABORTION 7; SerRS; Seryl-tRNA synthetase; Seryl-tRNA(Ser/Sec) synthetase", "protein_names_refseq": "Seryl-tRNA synthetase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11870)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;16107332;16251277;16297076;27862469", "class_list": "", "function": "Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IAJ3;O65395;Q944K1", "ec_number_list": [ { "id": "6.1.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.11", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0000049 tRNA binding;GO:0004828 serine-tRNA ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0007005 mitochondrion organization;GO:0070158 mitochondrial seryl-tRNA aminoacylation;GO:0009658 chloroplast organization;GO:0048481 plant ovule development;GO:0006434 seryl-tRNA aminoacylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RWT8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXU4-1", "uniprot_id": [ { "id": "THA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXU4", "type": "external" } ], "mass": 38942.0, "length": 358, "protein_name": "Low-specificity L-threonine aldolase 1", "gene_name": "THA1", "organism": "Arabidopsis", "refseq_name": "threonine aldolase 1", "refseq_ac": [ { "id": "NP_001031001", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031001", "type": "external" } ], "gene_names_uniprotkb": "THA1; F22O13.11; F22O13_11; threonine aldolase 1", "gene_names_refseq": "F22O13.11; F22O13_11; THA1; threonine aldolase 1", "protein_names_uniprotkb": "Low-specificity L-threonine aldolase 1; 4.1.2.48; Threonine aldolase 1", "protein_names_refseq": "threonine aldolase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08630)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15255874;17172352;19423640;27862469", "class_list": "", "function": "Threonine aldolase involved in threonine degradation to glycine. May play a role in the removal of L-allo-threonine., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG61;Q2V4P5;Q8LC88;Q9FRS2", "ec_number_list": [ { "id": "4.1.2.48", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.2.48", "type": "external" } ], "go_molecular_function": "GO:0008732 L-allo-threonine aldolase activity;GO:0004793 threonine aldolase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006545 glycine biosynthetic process;GO:0006567 L-threonine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RXU4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84K16-1", "uniprot_id": [ { "id": "AP1G1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84K16", "type": "external" } ], "mass": 96469.0, "length": 876, "protein_name": "AP-1 complex subunit gamma-1", "gene_name": "GAMMA-ADAPTIN; GAMMA-ADR", "organism": "Arabidopsis", "refseq_name": "gamma-adaptin 1", "refseq_ac": [ { "id": "NP_173802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173802", "type": "external" } ], "gene_names_uniprotkb": "GAMMA-ADAPTIN; GAMMA-ADR; GAMMA-ADAPTIN 1; Gamma-ADR; Gamma-adaptin; T23E23.7; gamma-adaptin 1", "gene_names_refseq": "GAMMA-ADAPTIN 1; Gamma-ADR; Gamma-adaptin; gamma-adaptin 1", "protein_names_uniprotkb": "AP-1 complex subunit gamma-1; Adaptor protein complex AP-1 large subunit gamma-1; Adaptor-related protein complex 1 subunit gamma-1; At-g-Ad; At-gamma-Ad; Clathrin assembly protein complex 1 gamma-1 large chain; Gamma-adaptin 1", "protein_names_refseq": "gamma-adaptin 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G23900)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11598180;12207647;14593172;16905657;23543752;27862469", "class_list": "", "function": "Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81227;Q9LRA3;Q9XFS0", "ec_number_list": [], "go_molecular_function": "GO:0035615 clathrin adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0030121 AP-1 adaptor complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport;GO:0006896 Golgi to vacuole transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84K16-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXG6-1", "uniprot_id": [ { "id": "B3GTH_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXG6", "type": "external" } ], "mass": 77037.0, "length": 673, "protein_name": "Hydroxyproline O-galactosyltransferase GALT4", "gene_name": "GALT4", "organism": "Arabidopsis", "refseq_name": "Galactosyltransferase family protein", "refseq_ac": [ { "id": "NP_174032", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174032", "type": "external" } ], "gene_names_uniprotkb": "GALT4; B3GALT17; T7N9.18; T7N9_18", "gene_names_refseq": "T7N9.18; T7N9_18", "protein_names_uniprotkb": "Hydroxyproline O-galactosyltransferase GALT4; 2.4.1.-; Beta-1,3-galactosyltransferase 17", "protein_names_refseq": "Galactosyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27120)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11910074;17630273;18548197;23111157;24905498;26690932;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. Utilizes UDP-galactose solely as sugar donor. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFX6;W8Q7B2", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding;GO:1990714 hydroxyproline O-galactosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0010405 arabinogalactan protein metabolic process;GO:0180062 protein O-linked glycosylation via galactose;GO:0009101 glycoprotein biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GXG6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYJ1-1", "uniprot_id": [ { "id": "MENE_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYJ1", "type": "external" } ], "mass": 61917.0, "length": 560, "protein_name": "2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal", "gene_name": "AAE14", "organism": "Arabidopsis", "refseq_name": "acyl-activating enzyme 14", "refseq_ac": [ { "id": "NP_001322322", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322322", "type": "external" } ], "gene_names_uniprotkb": "AAE14; F26G16.14; F26G16.3; F26G16_14; MENE; acyl-activating enzyme 14", "gene_names_refseq": "AAE14; F26G16.14; F26G16_14; acyl-activating enzyme 14", "protein_names_uniprotkb": "2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal; 6.2.1.26; Acyl-activating enzyme 14; O-succinylbenzoyl-CoA ligase", "protein_names_refseq": "acyl-activating enzyme 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G30520)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12805634;14593172;18208520;20150517;27862469", "class_list": "", "function": "Involved in the biosynthesis of phylloquinone (vitamin K1). Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9S9P7", "ec_number_list": [ { "id": "6.2.1.26", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.26", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0031956 medium-chain fatty acid-CoA ligase activity;GO:0008756 o-succinylbenzoate-CoA ligase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005778 peroxisomal membrane;GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0042372 phylloquinone biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VYJ1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WU6-1", "uniprot_id": [ { "id": "ARFQ_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WU6", "type": "external" } ], "mass": 63742.0, "length": 585, "protein_name": "Auxin response factor 17", "gene_name": "ARF17", "organism": "Arabidopsis", "refseq_name": "auxin response factor 17", "refseq_ac": [ { "id": "NP_001322496", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322496", "type": "external" } ], "gene_names_uniprotkb": "ARF17; F28K19.6; F28K19_6; T32E8.16; auxin response factor 17", "gene_names_refseq": "ARF17; F28K19.6; F28K19_6; auxin response factor 17", "protein_names_uniprotkb": "Auxin response factor 17", "protein_names_refseq": "auxin response factor 17", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77850)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12036261;14593172;18305205;18986826;27862469", "class_list": "", "function": "Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B2CTG7;B2CTG8;B2CTH0;Q93ZY5;Q9CA12;Q9SH16", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0003690 double-stranded DNA binding;GO:0000976 transcription cis-regulatory region binding;GO:0000987 cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009653 anatomical structure morphogenesis;GO:0009555 pollen development;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84WU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84P21-1", "uniprot_id": [ { "id": "4CLL5_ARATH", "url": "https://www.uniprot.org/uniprot/Q84P21", "type": "external" } ], "mass": 59375.0, "length": 546, "protein_name": "Peroxisomal OPC-8:0-CoA ligase 1", "gene_name": "4CLL5; OPCL1", "organism": "Arabidopsis", "refseq_name": "OPC-8:0 CoA ligase1", "refseq_ac": [ { "id": "NP_564115", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564115", "type": "external" } ], "gene_names_uniprotkb": "4CLL5; OPCL1; F5M15.17; F5M15_17; OPC-8:0 CoA ligase1; OPCL1", "gene_names_refseq": "F5M15.17; F5M15_17; OPC-8:0 CoA ligase1; OPCL1", "protein_names_uniprotkb": "Peroxisomal OPC-8:0-CoA ligase 1; 4-coumarate--CoA ligase isoform 9; 4-coumarate--CoA ligase-like 5; 6.2.1.-; At4CL9", "protein_names_refseq": "OPC-8:0 CoA ligase1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20510)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;12805634;12819348;14593172;16963437;17951448;18267944;19704801;27862469", "class_list": "", "function": "Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors (PubMed:16963437, PubMed:18267944). Converts 12-oxo-phytodienoic acid (OPDA) and 3-oxo-2-(2'-pentenyl)-cyclopentane-1-octanoic acid (OPC-8:0) into OPDA-CoA and OPC-8:0-CoA, respectively (PubMed:16963437, PubMed:18267944). Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioester (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C5H2;Q9LMV8", "ec_number_list": [ { "id": "6.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.-", "type": "external" }, { "id": "6.2.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.12", "type": "external" }, { "id": "6.2.1.27", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.27", "type": "external" }, { "id": "6.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0102391 decanoate-CoA ligase activity;GO:0016405 CoA-ligase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0009507 chloroplast", "go_biological_process": "GO:0009617 response to bacterium;GO:0009611 response to wounding;GO:0009695 jasmonic acid biosynthetic process;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84P21-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84MZ4-1", "uniprot_id": [ { "id": "TF3A_ARATH", "url": "https://www.uniprot.org/uniprot/Q84MZ4", "type": "external" } ], "mass": 46653.0, "length": 412, "protein_name": "Transcription factor IIIA", "gene_name": "TFIIIA", "organism": "Arabidopsis", "refseq_name": "transcription factor IIIA", "refseq_ac": [ { "id": "NP_565033", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565033", "type": "external" } ], "gene_names_uniprotkb": "TFIIIA; F28P5.6; F28P5_6; transcription factor IIIA", "gene_names_refseq": "F28P5.6; F28P5_6; TFIIIA; transcription factor IIIA", "protein_names_uniprotkb": "Transcription factor IIIA; AtTFIIIA", "protein_names_refseq": "transcription factor IIIA", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72050)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;12711688;14593172;15208423;15236668;17272265;19211543;21153748;22353599;23142779;27862469", "class_list": "", "function": "Essential protein (PubMed:22353599). Isoform 1 is a transcription activator the binds both 5S rDNA and 5S rRNA and stimulates the transcription of 5S rRNA gene (PubMed:12711688, PubMed:22353599). Isoform 1 regulates 5S rRNA levels during development (PubMed:22353599)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q940P2;Q9C7G8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0003723 RNA binding;GO:0008270 zinc ion binding;GO:0008097 5S rRNA binding;GO:0080084 5S rDNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q84MZ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84RQ9-1", "uniprot_id": [ { "id": "ARI12_ARATH", "url": "https://www.uniprot.org/uniprot/Q84RQ9", "type": "external" } ], "mass": 56495.0, "length": 496, "protein_name": "Probable E3 ubiquitin-protein ligase ARI12", "gene_name": "ARI12", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_001184919", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001184919", "type": "external" } ], "gene_names_uniprotkb": "ARI12; ARABIDOPSIS ARIADNE 12; ARIADNE 12; ATARI12; T20M3.15; T20M3_15", "gene_names_refseq": "ARABIDOPSIS ARIADNE 12; ARI12; ARIADNE 12; ATARI12; T20M3.15; T20M3_15", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase ARI12; 2.3.2.31; ARIADNE-like protein ARI12; Protein ariadne homolog 12; RING-type E3 ubiquitin transferase ARI12", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G05880)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12446796;12529512;14993207;27862469", "class_list": "", "function": "Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56YK5;Q9MA38", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0031624 ubiquitin conjugating enzyme binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0071456 cellular response to hypoxia;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0010224 response to UV-B", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84RQ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VZ1-1", "uniprot_id": [ { "id": "FHY1C_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VZ1", "type": "external" } ], "mass": 27695.0, "length": 245, "protein_name": "Flavin mononucleotide hydrolase 1, chloroplatic", "gene_name": "FHY1", "organism": "Arabidopsis", "refseq_name": "Haloacid dehalogenase-like hydrolase (HAD) superfamily protein", "refseq_ac": [ { "id": "NP_565221", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565221", "type": "external" } ], "gene_names_uniprotkb": "FHY1; AtcpFHy1; F20B17.21; F20B17_21; PYRP1", "gene_names_refseq": "Arabidopsis thaliana chloroplast FMN hydrolase 1; AtcpFHy1; F20B17.21; F20B17_21; FHY1; flavin mononucleotide hydrolase 1", "protein_names_uniprotkb": "Flavin mononucleotide hydrolase 1, chloroplatic; 3.1.3.102; 3.1.3.104; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate phosphatase; ARPP phosphatase; AtcpFHy1/PyrP1; AtcpFHy1", "protein_names_refseq": "Haloacid dehalogenase-like hydrolase (HAD) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79790)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;22002057;24123841;27490826;27862469", "class_list": "", "function": "FMN hydrolase that catalyzes the dephosphorylation of flavin mononucleotide (FMN) to riboflavin (PubMed:22002057, PubMed:24123841, PubMed:27490826). Can also dephosphorylate 5-amino-6-(5-phospho-D-ribitylamino)uracil, also known as ARPP (PubMed:24123841, PubMed:27490826). Not required for riboflavin biosynthesis in planta, but may help maintaining flavin homeostasis within chloroplasts (PubMed:27490826)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCB6;Q9MA00", "ec_number_list": [ { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" }, { "id": "3.1.3.104", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.104", "type": "external" }, { "id": "2.7.1.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.26", "type": "external" }, { "id": "3.1.3.102", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.102", "type": "external" } ], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0043726 5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity;GO:0090711 FMN hydrolase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009231 riboflavin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84VZ1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYB2-1", "uniprot_id": [ { "id": "UKL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYB2", "type": "external" } ], "mass": 52443.0, "length": 466, "protein_name": "Uridine kinase-like protein 3", "gene_name": "UKL3", "organism": "Arabidopsis", "refseq_name": "uridine kinase-like 3", "refseq_ac": [ { "id": "NP_001323277", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323277", "type": "external" } ], "gene_names_uniprotkb": "UKL3; F20N2.21; F20N2_21; uridine kinase-like 3", "gene_names_refseq": "F20N2.21; F20N2_21; UKL3; uridine kinase-like 3", "protein_names_uniprotkb": "Uridine kinase-like protein 3; UMP pyrophosphorylase", "protein_names_refseq": "uridine kinase-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G55810)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;19423640;19563437;27862469", "class_list": "", "function": "Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQ84;Q9LG32", "ec_number_list": [ { "id": "2.7.1.48", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.48", "type": "external" }, { "id": "2.4.2.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.9", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0005525 GTP binding;GO:0004849 uridine kinase activity;GO:0004845 uracil phosphoribosyltransferase activity;GO:0043771 cytidine kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0044206 UMP salvage;GO:0044211 CTP salvage;GO:0071456 cellular response to hypoxia;GO:2000904 regulation of starch metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VYB2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L9T7-1", "uniprot_id": [ { "id": "AHP5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L9T7", "type": "external" } ], "mass": 17925.0, "length": 157, "protein_name": "Histidine-containing phosphotransfer protein 5", "gene_name": "AHP5", "organism": "Arabidopsis", "refseq_name": "histidine-containing phosphotransfer factor 5", "refseq_ac": [ { "id": "NP_563684", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563684", "type": "external" } ], "gene_names_uniprotkb": "AHP5; F21B7.5", "gene_names_refseq": "AHP5; F21B7.5; histidine-containing phosphotransfer factor 5", "protein_names_uniprotkb": "Histidine-containing phosphotransfer protein 5", "protein_names_refseq": "histidine-containing phosphotransfer factor 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03430)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11193423;11230563;12068096;14981318;16965536;18642946;23132142;27862469", "class_list": "", "function": "Functions as a two-component phosphorelay mediator between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction through the multistep His-to-Asp phosphorelay., [UniProtKB, PubMed, PubMed, PubMed]; Functions as a two-component phosphorelay mediators between cytokinin sensor histidine kinases and response regulators (B-type ARRs). Plays an important role in propagating cytokinin signal transduction., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LR80;Q9MAY1", "ec_number_list": [], "go_molecular_function": "GO:0043424 protein histidine kinase binding;GO:0009927 histidine phosphotransfer kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0000160 phosphorelay signal transduction system;GO:0009736 cytokinin-activated signaling pathway;GO:0009557 antipodal cell differentiation;GO:0009560 embryo sac egg cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L9T7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JH7-1", "uniprot_id": [ { "id": "SIRB_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JH7", "type": "external" } ], "mass": 24925.0, "length": 225, "protein_name": "Sirohydrochlorin ferrochelatase, chloroplastic", "gene_name": "SIRB", "organism": "Arabidopsis", "refseq_name": "sirohydrochlorin ferrochelatase B", "refseq_ac": [ { "id": "NP_564562", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564562", "type": "external" } ], "gene_names_uniprotkb": "SIRB; ATSIRB; F14I3.20; F14I3_20", "gene_names_refseq": "ATSIRB; F14I3.20; F14I3_20; SIRB; sirohydrochlorin ferrochelatase B", "protein_names_uniprotkb": "Sirohydrochlorin ferrochelatase, chloroplastic; 4.99.1.4; AtSirB", "protein_names_refseq": "sirohydrochlorin ferrochelatase B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50170)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;15545265;22414210;27862469", "class_list": "", "function": "Chelates iron to the siroheme precursor. Catalyzes the last step of the siroheme biosynthesis. Unlike its counterparts in bacteria, contains an [Fe-S] cluster which is not involved directly in the enzymatic reaction, but may play regulatory role in iron, sulfur and tetrapyrrole metabolism (PubMed:15545265, PubMed:22414210). The [Fe-S] cluster is required for normal plant growth (PubMed:22414210)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8S7;Q9SX37", "ec_number_list": [ { "id": "4.99.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:4.99.1.4", "type": "external" } ], "go_molecular_function": "GO:0042802 identical protein binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0051536 iron-sulfur cluster binding;GO:0051266 sirohydrochlorin ferrochelatase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0019354 siroheme biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84JH7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LFX7-1", "uniprot_id": [ { "id": "BDG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LFX7", "type": "external" } ], "mass": 53428.0, "length": 469, "protein_name": "Probable lysophospholipase BODYGUARD 1", "gene_name": "BDG1", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_564837", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564837", "type": "external" } ], "gene_names_uniprotkb": "BDG1; BDG; BODYGUARD1; CB5; CED1; F1N19.24; F1N19_24", "gene_names_refseq": "9-CIS EPOXYCAROTENOID DIOXYGENASE DEFECTIVE 1; BDG1; BODYGUARD1; CED1; F1N19.24; F1N19_24", "protein_names_uniprotkb": "Probable lysophospholipase BODYGUARD 1; 3.1.1.-; AtBDG1; Protein 9-cis epoxycarotenoid dioxygenase defective 1; Protein COOL BREATH 5", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G64670)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;11910074;14593172;16299169;16415209;17257167;18952782;21610183;23505340;26990896;27862469", "class_list": "", "function": "Controls cuticle development and morphogenesis, by promoting cutin and suberin monomers loading (PubMed:16415209, PubMed:17257167, PubMed:18952782, PubMed:26990896). Involved in the regulation of abscissic acid (ABA) biosynthesis in response to osmotic stress. Plays an important role in osmotic stress and drought resistance (PubMed:21610183). Required to ensure a reduced permeability of aerial tissue, thus preventing transpiration (PubMed:18952782, PubMed:21610183, PubMed:26990896). Regulates lateral root hair development (PubMed:18952782)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]; Required for infection by the pathogenic necrotrophic fungus Botrytis cinerea, probably by regulating structural traits of the cuticle., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SGU8", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009505 plant-type cell wall;GO:0009507 chloroplast", "go_biological_process": "GO:0042335 cuticle development;GO:0006970 response to osmotic stress;GO:0050832 defense response to fungus;GO:0071555 cell wall organization;GO:0009688 abscisic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8LFX7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L9J7-1", "uniprot_id": [ { "id": "SWET1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L9J7", "type": "external" } ], "mass": 27268.0, "length": 247, "protein_name": "Bidirectional sugar transporter SWEET1", "gene_name": "SWEET1", "organism": "Arabidopsis", "refseq_name": "Nodulin MtN3 family protein", "refseq_ac": [ { "id": "NP_564140", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564140", "type": "external" } ], "gene_names_uniprotkb": "SWEET1; AtSWEET1; F24J8.9; F24J8_9", "gene_names_refseq": "AtSWEET1; F24J8.9; F24J8_9; SWEET1", "protein_names_uniprotkb": "Bidirectional sugar transporter SWEET1; AtSWEET1; Protein SUGARS WILL EVENTUALLY BE EXPORTED TRANSPORTERS 1", "protein_names_refseq": "Nodulin MtN3 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G21460)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;21107422;24027245;25988582;27862469", "class_list": "", "function": "Mediates both low-affinity uptake and efflux of sugar across the plasma membrane. Can transport glucose, and, to a lower extent, mannose, fructose and galactose., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LPL1", "ec_number_list": [], "go_molecular_function": "GO:0051119 sugar transmembrane transporter activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0008643 carbohydrate transport", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L9J7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L607-1", "uniprot_id": [ { "id": "SIN2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L607", "type": "external" } ], "mass": 42984.0, "length": 386, "protein_name": "Short integuments 2, mitochondrial", "gene_name": "SIN2", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_850353", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850353", "type": "external" } ], "gene_names_uniprotkb": "SIN2; DGP1; SHORT INTEGUMENT 2; T32G6.19; T32G6_19", "gene_names_refseq": "SHORT INTEGUMENT 2; SIN2; T32G6.19; T32G6_19", "protein_names_uniprotkb": "Short integuments 2, mitochondrial; DAR GTPase 1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41670)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;10835408;14593172;16849600;27862469;9573393", "class_list": "", "function": "GTPase that may function in mitochondrial ribosome assembly (Probable). Involved in a variety of growth processes during vegetative development and promotes growth and cell division in the developing integuments (PubMed:10835408, PubMed:16849600)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22228", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0070129 regulation of mitochondrial translation;GO:1902775 mitochondrial large ribosomal subunit assembly;GO:0000911 cytokinesis by cell plate formation;GO:0048481 plant ovule development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L607-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5W8-1", "uniprot_id": [ { "id": "PIL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5W8", "type": "external" } ], "mass": 46580.0, "length": 416, "protein_name": "Transcription factor PIL1", "gene_name": "PIL1", "organism": "Arabidopsis", "refseq_name": "phytochrome interacting factor 3-like 1", "refseq_ac": [ { "id": "NP_182220", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182220", "type": "external" } ], "gene_names_uniprotkb": "PIL1; BHLH124; EN110; F14M4.20", "gene_names_refseq": "F14M4.20; PIL1; phytochrome interacting factor 3-like 1", "protein_names_uniprotkb": "Transcription factor PIL1; AtbHLH124; Basic helix-loop-helix protein 124; Phytochrome-interacting factor 3-like 1; Transcription factor EN 110; bHLH 124; bHLH transcription factor bHLH124", "protein_names_refseq": "phytochrome interacting factor 3-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46970)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;11828023;12481096;12679534;12826627;12897250;14600211;14668869;16565297;16891401;23708772;25944101;27862469", "class_list": "", "function": "Transcription factor. Involved in responses to transient and long-term shade. Required for the light-mediated inhibition of hypocotyl elongation. Necessary for rapid light-induced expression of the photomorphogenesis- and circadian-related gene APRR9. Seems to play a role in multiple PHYB responses, such as flowering transition and petiole elongation., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80727;Q84WY4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009641 shade avoidance;GO:0010017 red or far-red light signaling pathway;GO:1990110 callus formation", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8L5W8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPQ9-1", "uniprot_id": [ { "id": "FPA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPQ9", "type": "external" } ], "mass": 99598.0, "length": 901, "protein_name": "Flowering time control protein FPA", "gene_name": "FPA", "organism": "Arabidopsis", "refseq_name": "RNA binding protein", "refseq_ac": [ { "id": "NP_001078046", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078046", "type": "external" } ], "gene_names_uniprotkb": "FPA; T1O24.15", "gene_names_refseq": "FPA; T1O24.15", "protein_names_uniprotkb": "Flowering time control protein FPA", "protein_names_refseq": "RNA binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43410)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;11402170;14593172;15911588;17916737;19423640;20079695;22440515;23111157;23328941;23572148;23776212;25561503;27862469;28011693;28154133;30833711", "class_list": "", "function": "Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for RNA-mediated chromatin silencing of a range of loci in the genome. Cotranscriptionally recognizes aberrant RNA and marks it for silencing. Controls alternative cleavage and polyadenylation on pre-mRNAs and antisense RNAs. Acts redundantly with FCA to prevent the expression of distally polyadenylated antisense RNAs at the FLC locus., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQX1;B9DG59;C0Z2L9;O22855;Q58T22", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0031048 regulatory ncRNA-mediated heterochromatin formation;GO:0009553 embryo sac development;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8LPQ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L960-1", "uniprot_id": [ { "id": "SVR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L960", "type": "external" } ], "mass": 45108.0, "length": 410, "protein_name": "Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic", "gene_name": "SVR1", "organism": "Arabidopsis", "refseq_name": "pseudouridine synthase family protein", "refseq_ac": [ { "id": "NP_181447", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181447", "type": "external" } ], "gene_names_uniprotkb": "SVR1; PDE328; PIGMENT DEFECTIVE 328; SUPPRESSOR OF VARIEGATION 1; T16B24.22; T16B24_22", "gene_names_refseq": "AT2G39150; PDE328; PIGMENT DEFECTIVE 328; SUPPRESSOR OF VARIEGATION 1; SVR1; T16B24.22; T16B24_22", "protein_names_uniprotkb": "Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic; 5.4.99.-; Protein PIGMENT DEFECTIVE 328; Protein SUPPRESSOR OF VARIEGATION 1", "protein_names_refseq": "pseudouridine synthase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39140)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;11910074;18599582;27862469", "class_list": "", "function": "Responsible for synthesis of pseudouridine in chloroplastic 23S ribosomal RNA (Probable). Necessary for normal chloroplast rRNA processing and translation. Required for normal chloroplast development and maintenance. May function in other plastids, such as root amyloplasts (PubMed:18599582)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80966;O80967", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0009982 pseudouridine synthase activity;GO:0003723 RNA binding", "go_cellular_component": "GO:0009501 amyloplast;GO:0009507 chloroplast", "go_biological_process": "GO:0001522 pseudouridine synthesis;GO:0032544 plastid translation;GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA);GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA);GO:0006364 rRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8L960-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGU6-1", "uniprot_id": [ { "id": "CD27B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGU6", "type": "external" } ], "mass": 83068.0, "length": 744, "protein_name": "Cell division cycle protein 27 homolog B", "gene_name": "CDC27B; HBT", "organism": "Arabidopsis", "refseq_name": "CDC27 family protein", "refseq_ac": [ { "id": "NP_849994", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849994", "type": "external" } ], "gene_names_uniprotkb": "CDC27B; HBT; CDC27b; HBT; HOBBIT; T2G17.20; T2G17_20", "gene_names_refseq": "CDC27b; HBT; HOBBIT; T2G17.20; T2G17_20", "protein_names_uniprotkb": "Cell division cycle protein 27 homolog B; CDC27 homolog B; Protein HOBBIT", "protein_names_refseq": "CDC27 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20000)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617197;12368267;14593172;17944809;18463617;20466843;22869741;23111157;23328941;23572148;23660473;23776212;24206843;25561503;26091701;26187819;27862469;28011693;30833711", "class_list": "", "function": "Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication. Functionally redundant with CDC27A in the control of gametophyte development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4M8;Q9SL81", "ec_number_list": [], "go_molecular_function": "GO:0140767 enzyme-substrate adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0005680 anaphase-promoting complex;GO:0009504 cell plate", "go_biological_process": "GO:0030154 cell differentiation;GO:0051301 cell division;GO:0007346 regulation of mitotic cell cycle;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8LGU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWZ6-1", "uniprot_id": [ { "id": "PIN4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWZ6", "type": "external" } ], "mass": 66742.0, "length": 616, "protein_name": "Auxin efflux carrier component 4", "gene_name": "PIN4", "organism": "Arabidopsis", "refseq_name": "Auxin efflux carrier family protein", "refseq_ac": [ { "id": "NP_565261", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565261", "type": "external" } ], "gene_names_uniprotkb": "PIN4; ARABIDOPSIS PIN-FORMED 4; ATPIN4; F10A8.27; F2I9.4; PIN-FORMED 4", "gene_names_refseq": "ARABIDOPSIS PIN-FORMED 4; ATPIN4; AUXIN TRANSPORTER SPLICE VARIANT B; F10A8.27; PIN-FORMED 4; PIN4", "protein_names_uniprotkb": "Auxin efflux carrier component 4; AtPIN4", "protein_names_refseq": "Auxin efflux carrier family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G01420)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;11893337;14593172;14614497;15817418;19376835;20439545;22540348;24180465;25561503;27862469;30865619;31299202", "class_list": "", "function": "Acts as a component of the auxin efflux carrier. Plays a role in generating a sink for auxin into columella cells (PubMed:20439545). Maintains the endogenous auxin gradient, which is essential for correct root patterning (PubMed:20439545). Involved in EXO70A3-regulated gravitropic responses in columella cells and in root system architecture (RSA) (PubMed:31299202). Together with PIN3 and PIN7, involved in the connective auxin transport (CAT) that ensures communication across the shoot system, and modulates strigolactone-mediated shoot branching control (PubMed:30865619). The abcb19 pin3 pin4 pin7 quadruple mutant exhibits an additive phenotype on strigolactone-mediated bud outgrowth responses and shoot branching control (PubMed:30865619)., [UniProtKB, PubMed, PubMed, PubMed]; May act as a component of the auxin efflux carrier., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9M7Q6;Q9MAS3", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0010329 auxin efflux transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0071944 cell periphery;GO:0016020 membrane", "go_biological_process": "GO:0009630 gravitropism;GO:0009734 auxin-activated signaling pathway;GO:0009926 auxin polar transport;GO:0010015 root morphogenesis;GO:0010315 auxin export across the plasma membrane", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8RWZ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84XU2-1", "uniprot_id": [ { "id": "PPP5_ARATH", "url": "https://www.uniprot.org/uniprot/Q84XU2", "type": "external" } ], "mass": 60283.0, "length": 538, "protein_name": "Serine/threonine-protein phosphatase 5", "gene_name": "PAPP5; PP5", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PAPP5; PP5; AtPP5; F7D19.19; F7D19_19; PAPP5; PP5.2; PP5; PROTEIN PHOSPHATASE 5; protein phosphatase 5.2", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase 5; 3.1.3.16", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42810)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;12972652;14593172;15707886;15707897;17368080;22060019;27862469;30833711", "class_list": "", "function": "Isoform 2 dephosphorylates phosphorylated phytochromes, with a preference toward Pfr forms, and enhances phytochrome-mediated photoresponses, probably by enhancing their stability and their binding affinity for light signal transducers such as NDPK2. Can use para-nitrophenylphosphate (pNPP) as substrate., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56X87;Q8RXU0;Q8W581;Q9SJH5", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0004721 phosphoprotein phosphatase activity;GO:0046906 tetrapyrrole binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0016607 nuclear speck", "go_biological_process": "GO:0006913 nucleocytoplasmic transport;GO:0010017 red or far-red light signaling pathway;GO:0010019 chloroplast-nucleus signaling pathway;GO:1902325 negative regulation of chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84XU2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84M98-1", "uniprot_id": [ { "id": "EME1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q84M98", "type": "external" } ], "mass": 61239.0, "length": 546, "protein_name": "Crossover junction endonuclease EME1A", "gene_name": "EME1A", "organism": "Arabidopsis", "refseq_name": "essential meiotic endonuclease 1A", "refseq_ac": [ { "id": "NP_001189572", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189572", "type": "external" } ], "gene_names_uniprotkb": "EME1A; ATEME1A; F7D8.12; F7D8_12", "gene_names_refseq": "ATEME1A; EME1A; F7D8.12; F7D8_12; essential meiotic endonuclease 1A", "protein_names_uniprotkb": "Crossover junction endonuclease EME1A; 3.1.22.-; AtEME1A; Essential meiotic endonuclease 1A", "protein_names_refseq": "essential meiotic endonuclease 1A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G21800)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;19339504;25561503;27862469", "class_list": "", "function": "Interacts with MUS81 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks, nicked Holliday junctions and also intact Holliday junctions with a reduced efficiency. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. Plays a role in DNA repair and in genotoxic stress-induced homologous recombination (HR) in somatic cells. Mediates a subset of meiotic recombination events that are insensitive to crossover interference., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C5IHG3;Q9SJ19", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0048476 Holliday junction resolvase complex", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0051301 cell division;GO:0006302 double-strand break repair", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84M98-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S9M3-1", "uniprot_id": [ { "id": "GRF9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S9M3", "type": "external" } ], "mass": 48867.0, "length": 431, "protein_name": "Growth-regulating factor 9", "gene_name": "GRF9", "organism": "Arabidopsis", "refseq_name": "growth-regulating factor 9", "refseq_ac": [ { "id": "NP_001324014", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324014", "type": "external" } ], "gene_names_uniprotkb": "GRF9; AtGRF9; F17K2.27; F4L23.1; F4L23_1; growth-regulating factor 9", "gene_names_refseq": "AtGRF9; F4L23.1; F4L23_1; GRF9; growth-regulating factor 9", "protein_names_uniprotkb": "Growth-regulating factor 9; AtGRF9; Transcription activator GRF9", "protein_names_refseq": "growth-regulating factor 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45480)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;12974814;14593172;15200956;15960617;19453503;20023165;21036927;27862469", "class_list": "", "function": "Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation., [UniProtKB, PubMed]; Transcription activator., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IG65;O22125;Q8S8T9", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0048366 leaf development;GO:0099402 plant organ development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8S9M3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAM0-1", "uniprot_id": [ { "id": "UBP4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAM0", "type": "external" } ], "mass": 41846.0, "length": 365, "protein_name": "Ubiquitin carboxyl-terminal hydrolase 4", "gene_name": "UBP4", "organism": "Arabidopsis", "refseq_name": "ubiquitin-specific protease 4", "refseq_ac": [ { "id": "NP_565532", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565532", "type": "external" } ], "gene_names_uniprotkb": "UBP4; ATUBP4; T26C19.3; T26C19_3; UBIQUITIN-SPECIFIC PROTEASE 4; ubiquitin-specific protease 4", "gene_names_refseq": "ATUBP4; T26C19.3; T26C19_3; UBIQUITIN-SPECIFIC PROTEASE 4; UBP4; ubiquitin-specific protease 4", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase 4; 3.4.19.12; AtUBP4; Deubiquitinating enzyme 4; Ubiquitin thioesterase 4; Ubiquitin-specific-processing protease 4", "protein_names_refseq": "ubiquitin-specific protease 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22310)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;10898935;11115897;12912986;14593172;17905865;25561503;27862469;9268021", "class_list": "", "function": "Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Required for the correct development of pollen., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O24455", "ec_number_list": [], "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0031647 regulation of protein stability", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LAM0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWV3-1", "uniprot_id": [ { "id": "CCL11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWV3", "type": "external" } ], "mass": 47555.0, "length": 416, "protein_name": "Cyclin-L1-1", "gene_name": "CYCL1-1; RCY1", "organism": "Arabidopsis", "refseq_name": "arginine-rich cyclin 1", "refseq_ac": [ { "id": "NP_001077962", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077962", "type": "external" } ], "gene_names_uniprotkb": "CYCL1-1; RCY1; ARGININE-RICH CYCLIN 1; ATRCY1; MOS12; RCY1; T9J22.10; T9J22_10; arginine-rich cyclin 1; modifier of snc1 12", "gene_names_refseq": "ARGININE-RICH CYCLIN 1; ATRCY1; MOS12; RCY1; T9J22.10; T9J22_10; arginine-rich cyclin 1; modifier of snc1 12", "protein_names_uniprotkb": "Cyclin-L1-1; 1; Arginine-rich cyclin 1; AtRCY1; CycL1; Protein MODIFIER OF SNC1 12", "protein_names_refseq": "arginine-rich cyclin 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26430)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;12047626;14593172;15208425;19423640;22248079;23524848;24469829;25561503;27862469;30833711", "class_list": "", "function": "Cognate cyclin for CDKG1. Required for synapsis and male meiosis, and for the proper splicing of specific resistance (R) genes. Involved in regulation of DNA methylation and transcriptional silencing., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MR67;O48710;Q94L33", "ec_number_list": [], "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009506 plasmodesma", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0051301 cell division;GO:0006355 regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0051321 meiotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8RWV3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUT5-1", "uniprot_id": [ { "id": "GNAT6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUT5", "type": "external" } ], "mass": 33608.0, "length": 288, "protein_name": "GCN5-related N-acetyltransferase 6, chloroplastic", "gene_name": "GNAT6", "organism": "Arabidopsis", "refseq_name": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "refseq_ac": [ { "id": "NP_001318205", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318205", "type": "external" } ], "gene_names_uniprotkb": "GNAT6; F5K7.26", "gene_names_refseq": "", "protein_names_uniprotkb": "GCN5-related N-acetyltransferase 6, chloroplastic; 2.3.1.255; 2.3.1.48", "protein_names_refseq": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G06025)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;12481096;27862469;32633465", "class_list": "", "function": "Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA), with a large spectrum of modified N-termini, including methionine, alanine, serine, threonine and to a lower extent valine as substrates, and epsilon-lysine acetylation (KA)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.1.48", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.48", "type": "external" }, { "id": "2.3.1.87", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.87", "type": "external" }, { "id": "2.3.1.255", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.255", "type": "external" }, { "id": "2.3.1.259", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.259", "type": "external" } ], "go_molecular_function": "GO:0061733 protein-lysine-acetyltransferase activity;GO:0008080 N-acetyltransferase activity;GO:0004596 protein-N-terminal amino-acid acetyltransferase activity;GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups", "go_cellular_component": "GO:0005739 mitochondrion;GO:0048471 perinuclear region of cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0018394 peptidyl-lysine acetylation;GO:0006474 N-terminal protein amino acid acetylation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8GUT5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY79-1", "uniprot_id": [ { "id": "PAAS_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY79", "type": "external" } ], "mass": 54423.0, "length": 490, "protein_name": "Phenylacetaldehyde synthase", "gene_name": "AAS; ELI5", "organism": "Arabidopsis", "refseq_name": "Pyridoxal phosphate (PLP)-dependent transferases superfamily protein", "refseq_ac": [ { "id": "NP_849999", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849999", "type": "external" } ], "gene_names_uniprotkb": "AAS; ELI5; AADC; AAS; AtAAS; F11A3.11; F11A3_11; aromatic aldehyde synthase", "gene_names_refseq": "AAS; AtAAS; F11A3.11; F11A3_11; aromatic aldehyde synthase", "protein_names_uniprotkb": "Phenylacetaldehyde synthase; 3,4-dihydroxyphenylacetaldehyde synthase; 4.1.1.107; 4.1.1.109; Aromatic L-amino acid decarboxylase; Aromatic aldehyde synthase; AtAAS; AtPAAS; DHPAA synthase", "protein_names_refseq": "Pyridoxal phosphate (PLP)-dependent transferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20340)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;21284755;23204519;25561503;27862469;32371491", "class_list": "", "function": "Bifunctional enzyme that catalyzes the decarboxylation of L-phenylalanine to 2-phenylethylamine, which is then oxidized to form 2-phenylacetaldehyde, a constituent of floral scent (PubMed:21284755, PubMed:23204519). 2-phenylacetaldehyde is a precursor of 2-phenylethanol, another constituent of floral scent (PubMed:21284755). Catalyzes both the decarboxylation and deamination of L-dopa to 3,4-dihydroxylphenylacetaldehyde (DHPAA) (PubMed:21284755)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6L7A0;Q9SK68;Q9SMY2;Q9SMY3", "ec_number_list": [ { "id": "4.1.1.107", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.107", "type": "external" }, { "id": "4.1.1.109", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.109", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0016831 carboxy-lyase activity;GO:0106425 3,4-dihydroxyphenylacetaldehyde synthase activity;GO:1990055 phenylacetaldehyde synthase activity;GO:0036469 L-tryptophan decarboxylase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009611 response to wounding;GO:0006559 L-phenylalanine catabolic process;GO:0006587 serotonin biosynthetic process from tryptophan;GO:0006520 amino acid metabolic process;GO:0019752 carboxylic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RY79-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8N6-1", "uniprot_id": [ { "id": "PLA2A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8N6", "type": "external" } ], "mass": 16322.0, "length": 148, "protein_name": "Phospholipase A2-alpha", "gene_name": "PLA2-ALPHA", "organism": "Arabidopsis", "refseq_name": "Phospholipase A2 family protein", "refseq_ac": [ { "id": "NP_565337", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565337", "type": "external" } ], "gene_names_uniprotkb": "PLA2-ALPHA; ATSPLA2-ALPHA; PHOSPHOLIPASE A2-ALPHA; T4E14.19", "gene_names_refseq": "ATSPLA2-ALPHA; PHOSPHOLIPASE A2-ALPHA; PLA2-ALPHA", "protein_names_uniprotkb": "Phospholipase A2-alpha; 3.1.1.4; AtsPLA2-alpha; Secretory phospholipase A2-alpha", "protein_names_refseq": "Phospholipase A2 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G06925)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;14593172;15130548;15748654;16140037;16669612;17692835;20525850;20696912;27862469", "class_list": "", "function": "PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Releases lysophospholipids (LPLs) and free fatty acids (FFAs) from membrane phospholipids in response to hormones and other external stimuli. Modulates the trafficking of PIN proteins to the plasma membrane (PubMed:16140037, PubMed:20525850). Negatively regulates MYB30 transcriptional activity and hypersensitive response control (PubMed:20696912)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.4", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0008289 lipid binding;GO:0004623 phospholipase A2 activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0031410 cytoplasmic vesicle;GO:0005773 vacuole", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0050482 arachidonate secretion;GO:0006644 phospholipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8S8N6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWE6-1", "uniprot_id": [ { "id": "EER5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWE6", "type": "external" } ], "mass": 47614.0, "length": 413, "protein_name": "Enhanced ethylene response protein 5", "gene_name": "EER5", "organism": "Arabidopsis", "refseq_name": "proteasome family protein", "refseq_ac": [ { "id": "NP_179546", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179546", "type": "external" } ], "gene_names_uniprotkb": "EER5; AtTHP1; ENHANCED ETHYLENE RESPONSE 5; ESSP1; F3P11.16; F3P11_16; THP1", "gene_names_refseq": "AtTHP1; EER5; ENHANCED ETHYLENE RESPONSE 5; ESSP1; F3P11.16; F3P11_16; ectopic expression of seed storage proteins 1", "protein_names_uniprotkb": "Enhanced ethylene response protein 5; AtTHP1; Nuclear mRNA export protein THP1", "protein_names_refseq": "proteasome family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G19560)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11910074;18429939;19843313;22951400;23820729;27862469", "class_list": "", "function": "Involved in the regulation of ethylene response (PubMed:18429939). Probable TREX-2 component required for nuclear RNA export. The TREX-2 complex (transcription and export complex 2) functions in docking export-competent ribonucleoprotein particles (mRNPs) to the nuclear entrance of the nuclear pore complex (nuclear basket). TREX-2 participates in mRNA export and accurate chromatin positioning in the nucleus by tethering genes to the nuclear periphery (PubMed:19843313)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZUN6", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0070390 transcription export complex 2;GO:0000502 proteasome complex", "go_biological_process": "GO:0016973 poly(A)+ mRNA export from nucleus;GO:0006368 transcription elongation by RNA polymerase II;GO:0000973 post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery;GO:0009723 response to ethylene;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GWE6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JU6-1", "uniprot_id": [ { "id": "HOS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JU6", "type": "external" } ], "mass": 105229.0, "length": 927, "protein_name": "E3 ubiquitin-protein ligase HOS1", "gene_name": "HOS1", "organism": "Arabidopsis", "refseq_name": "ubiquitin-protein ligase", "refseq_ac": [ { "id": "NP_181511", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181511", "type": "external" } ], "gene_names_uniprotkb": "HOS1; EARLY IN SHORT DAYS 6; ESD6; T5I7.11; T5I7_11", "gene_names_refseq": "EARLY IN SHORT DAYS 6; ESD6; HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1; HOS1; T5I7.11; T5I7_11", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase HOS1; 2.3.2.27; Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1; RING finger protein HOS1; RING-type E3 ubiquitin transferase HOS1", "protein_names_refseq": "ubiquitin-protein ligase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39810)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10617197;11297514;14593172;16702557;18463617;19245862;19376835;20466843;21189294;21768351;22960247;23111157;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27862469;29167316;30833711", "class_list": "", "function": "E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of the transcription factor ICE1. Acts as a negative regulator of cold signaling pathways (PubMed:16702557). Probably involved in recruiting the NUP107-160 subcomplex of the nuclear pore complex to chromatin (Probable). Controls flowering time in response to ambient temperatures (16 and 23 degrees Celsius) and intermittent cold, probably via the regulation of FT and TSF levels (PubMed:22960247)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22289", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0009409 response to cold;GO:0045892 negative regulation of DNA-templated transcription;GO:0016567 protein ubiquitination;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q84JU6-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYT8-1", "uniprot_id": [ { "id": "SOK3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYT8", "type": "external" } ], "mass": 60084.0, "length": 540, "protein_name": "Protein SOSEKI 3", "gene_name": "SOK3", "organism": "Arabidopsis", "refseq_name": "UPSTREAM OF FLC protein (DUF966)", "refseq_ac": [ { "id": "NP_180382", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180382", "type": "external" } ], "gene_names_uniprotkb": "SOK3; F24D13.6; F24D13_6", "gene_names_refseq": "F24D13.6; F24D13_6", "protein_names_uniprotkb": "Protein SOSEKI 3; AtSOK3", "protein_names_refseq": "UPSTREAM OF FLC protein (DUF966)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28150)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617197;11910074;14593172;19376835;21768351;23111157;23572148;23660473;25561503;26091701;27862469;28011693;29654922;30737509;32004461", "class_list": "", "function": "SOSEKI proteins (SOK1-5) locally interpret global polarity cues and can influence cell division orientation to coordinate cell polarization relative to body axes, probably by guiding ANGUSTIFOLIA (AN) polarized localization., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 19, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZUV7", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009925 basal plasma membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0051301 cell division;GO:0051258 protein polymerization;GO:0051302 regulation of cell division;GO:0090708 specification of plant organ axis polarity;GO:2000067 regulation of root morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8GYT8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L500-1", "uniprot_id": [ { "id": "APRR9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L500", "type": "external" } ], "mass": 52565.0, "length": 468, "protein_name": "Two-component response regulator-like APRR9", "gene_name": "APRR9; PRR9", "organism": "Arabidopsis", "refseq_name": "pseudo-response regulator 9", "refseq_ac": [ { "id": "NP_001325091", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325091", "type": "external" } ], "gene_names_uniprotkb": "APRR9; PRR9; APRR9; F19D11.7; TL1; TOC1-LIKE PROTEIN 1; pseudo-response regulator 9", "gene_names_refseq": "APRR9; Arabidopsis pseudo-response regulator 9; F19D11.7; PRR9; TL1; TOC1-LIKE PROTEIN 1; pseudo-response regulator 9", "protein_names_uniprotkb": "Two-component response regulator-like APRR9; Pseudo-response regulator 9", "protein_names_refseq": "pseudo-response regulator 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46790)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10617197;10926537;10945350;11100772;14593172;18562312;20233950;20962777;21098730;21357491;22307044;22327739;22942380;23027938;23933882;27862469", "class_list": "", "function": "Transcriptional repressor of CCA1 and LHY, and positive regulator of LWD1 and LWD2 expression. Controls photoperiodic flowering response and temperature compensation. Involved in the positive and negative feedback loops of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. Regulated at the transcriptional level by a corepressor complex consisting of ELF4, ELF3, and LUX. APRR9, APRR7, and APRR5 coordinately act on the upstream region of the target genes to repress their expression from noon until midnight. The particular coordinated sequential expression of APRR9, APRR7, APRR5, APRR3 and APPR1 result to circadian waves that may be at the basis of the endogenous circadian clock., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81035;Q9LKL1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0007623 circadian rhythm;GO:0000160 phosphorelay signal transduction system", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8L500-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LL04-1", "uniprot_id": [ { "id": "CPL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LL04", "type": "external" } ], "mass": 136479.0, "length": 1241, "protein_name": "RNA polymerase II C-terminal domain phosphatase-like 3", "gene_name": "CPL3", "organism": "Arabidopsis", "refseq_name": "C-terminal domain phosphatase-like 3", "refseq_ac": [ { "id": "NP_180912", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180912", "type": "external" } ], "gene_names_uniprotkb": "CPL3; AGGIE1; ATCPL3; F4P9.31; F4P9_31", "gene_names_refseq": "ATCPL3; C-terminal domain phosphatase-like 3; CPL3; F4P9.31; F4P9_31", "protein_names_uniprotkb": "RNA polymerase II C-terminal domain phosphatase-like 3; 3.1.3.16; AtCPL3; CTD phosphatase-like 3; Carboxyl-terminal phosphatase-like 3; FCP-like 3", "protein_names_refseq": "C-terminal domain phosphatase-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33540)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617197;12149434;16905668;18156295;19376835;21768351;23111157;23328941;23572148;25464831;25561503;27862469;28011693;28154133;31076735", "class_list": "", "function": "Completely dephosphorylates 'Ser-2', and partially 'Ser-5' and 'Ser-7' of the heptad repeats YSPTSPS in the C-terminal domain (CTD) of the largest RNA polymerase II subunit (RPB1) (PubMed:25464831). Involved in defense response (PubMed:25464831). Acts as a negative regulator of immune gene expression and immunity to pathogen infections (PubMed:25464831). Preferentially dephosphorylates 'Ser-2' of RNA polymerase II CTD (PubMed:25464831). This counterregulates the MAP kinase (MAPK) or cyclin-dependent kinase C (CDKC)-mediated phosphorylation of CTD in response to pathogens and upon perception of microbe-associated molecular patterns (MAMPs) (PubMed:25464831). MAPKs phosphorylate and activate CDKCs, which are CTD kinases that positively regulate plant innate immunity (PubMed:25464831). Acts as a negative regulator of stress gene transcription involved in abscisic acid (ABA) mediated signaling pathway and cold resistance (PubMed:12149434, PubMed:16905668). Acts as a post-transcriptional gene silencing (PTGS) suppressor (PubMed:31076735)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]; This promotes the activity of RNA polymerase II., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 4, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 4, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 4, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 4, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O22804", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0046872 metal ion binding;GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0009651 response to salt stress;GO:1900369 negative regulation of post-transcriptional gene silencing by regulatory ncRNA;GO:2000028 regulation of photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q8LL04-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GW19-1", "uniprot_id": [ { "id": "FACE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GW19", "type": "external" } ], "mass": 34548.0, "length": 311, "protein_name": "CAAX prenyl protease 2", "gene_name": "FACE2", "organism": "Arabidopsis", "refseq_name": "farnesylated protein-converting enzyme 2", "refseq_ac": [ { "id": "NP_850262", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850262", "type": "external" } ], "gene_names_uniprotkb": "FACE2; ATFACE-2; ATFACE2; ATRCE1; F2H17; RAS-CONVERTING ENZYME 1; RCE1", "gene_names_refseq": "ARABIDOPSIS THALIANA FARNESYLATED PROTEIN-CONVERTING ENZYME 2; ARABIDOPSIS THALIANA FARNESYLATED PROTEIN-CONVERTING ENZYME-2; ATFACE-2; ATFACE2; ATRCE1; FACE2; RAS-CONVERTING ENZYME 1; RCE1; farnesylated protein-converting enzyme 2", "protein_names_uniprotkb": "CAAX prenyl protease 2; 3.4.26.1; AtFACE-2; AtRCE1; Farnesylated proteins-converting enzyme 2; Prenyl protein-specific endoprotease 2; Protein RAS-CONVERTING ENZYME 1", "protein_names_refseq": "farnesylated protein-converting enzyme 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G36305)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11910074;12928436;14593172;18641086;27862469", "class_list": "", "function": "Protease involved in the processing of a variety of prenylated proteins containing the C-terminal CAAX motif, where C is a cysteine modified with an isoprenoid lipid, A is an aliphatic amino acid and X is any C-terminal amino acid. Proteolytically removes the C-terminal three residues of farnesylated and geranylated proteins, leaving the prenylated cysteine as the new C-terminus. The substrate specificity is only partially overlapping with that of FACE1. CAAX processing is likely required for subcellular targeting of prenylated proteins to the plasma membrane., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q70VU9", "ec_number_list": [], "go_molecular_function": "GO:0004175 endopeptidase activity;GO:0004222 metalloendopeptidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0071586 CAAX-box protein processing;GO:0016485 protein processing;GO:0080120 CAAX-box protein maturation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GW19-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWJ1-1", "uniprot_id": [ { "id": "HPT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWJ1", "type": "external" } ], "mass": 43909.0, "length": 393, "protein_name": "Homogentisate phytyltransferase 1, chloroplastic", "gene_name": "HPT1", "organism": "Arabidopsis", "refseq_name": "homogentisate phytyltransferase 1", "refseq_ac": [ { "id": "NP_849984", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849984", "type": "external" } ], "gene_names_uniprotkb": "HPT1; ATHPT; F19F24.15; F19F24_15; TOCOPHEROL PHYTYLTRANSFERASE; TPT1; VITAMIN E 2; VTE2-1; VTE2", "gene_names_refseq": "ATHPT; F19F24.15; F19F24_15; HOMOGENTISATE PHYTYLTRANSFERASE; HPT1; TOCOPHEROL PHYTYLTRANSFERASE; TOCOPHEROL POLYPRENYLTRANSFERASE; TPT1; VITAMIN E 2; VTE2; homogentisate phytyltransferase 1", "protein_names_uniprotkb": "Homogentisate phytyltransferase 1, chloroplastic; 2.5.1.115; AtHPT1; AtVTE2-1; Tocopherol polyprenyltransferase 1; Vitamin E pathway gene 2-1 protein", "protein_names_refseq": "homogentisate phytyltransferase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G18950)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617197;11706191;12011362;12586887;14593172;16258032;16408209;16989822;17012603;18314499;20691023;20837525;21223386;22074104;27862469", "class_list": "", "function": "Involved in the synthesis of tocopherol (vitamin E). Catalyzes the condensation of homogentisate and phytyl diphosphate to form dimethylphytylhydrquinone. Low activity with geranylgeranyl diphosphate as substrate, but no activity with farnesyl diphosphate or solanesyl diphosphate. Tocopherol functions to limit lipid oxidation during seed desiccation, quiescence and germination and early seedling development. Protects thylakoid membrane lipids from photooxidation and is required for low-temperature adaptation., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64625", "ec_number_list": [ { "id": "2.5.1.115", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.115", "type": "external" } ], "go_molecular_function": "GO:0004659 prenyltransferase activity;GO:0010176 homogentisate phytyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0009266 response to temperature stimulus;GO:0006636 unsaturated fatty acid biosynthetic process;GO:0010189 vitamin E biosynthetic process;GO:0031347 regulation of defense response;GO:0071555 cell wall organization", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8VWJ1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZB4-1", "uniprot_id": [ { "id": "PLA2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZB4", "type": "external" } ], "mass": 16286.0, "length": 147, "protein_name": "Phospholipase A2-beta", "gene_name": "PLA2-BETA", "organism": "Arabidopsis", "refseq_name": "phospholipase A2-beta", "refseq_ac": [ { "id": "NP_179559", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179559", "type": "external" } ], "gene_names_uniprotkb": "PLA2-BETA; F6F22.28; F6F22_28; phospholipase A2-beta", "gene_names_refseq": "F6F22.28; F6F22_28; PLA2-BETA; phospholipase A2-beta", "protein_names_uniprotkb": "Phospholipase A2-beta; 3.1.1.4; AtsPLA2-beta; Secretory phospholipase A2-beta", "protein_names_refseq": "phospholipase A2-beta", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G19690)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;12953106;14993207;15130548;15748654;18725378;20525850;21278126;27862469", "class_list": "", "function": "PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Releases lysophospholipids (LPLs) and free fatty acids (FFAs) from membrane phospholipids in response to hormones and other external stimuli. Regulates the process of cell elongation and plays important roles in shoot gravitropism by mediating auxin-induced cell elongation. Involved in stomatal opening in response to light. Plays a role in pollen development and germination and tube growth., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82208", "ec_number_list": [ { "id": "3.1.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.4", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0008289 lipid binding;GO:0004623 phospholipase A2 activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0012505 endomembrane system", "go_biological_process": "GO:0030307 positive regulation of cell growth;GO:0016042 lipid catabolic process;GO:0050482 arachidonate secretion;GO:0009416 response to light stimulus;GO:0006644 phospholipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GZB4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JF5-1", "uniprot_id": [ { "id": "PTA14_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JF5", "type": "external" } ], "mass": 55611.0, "length": 483, "protein_name": "Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14", "gene_name": "PTAC14", "organism": "Arabidopsis", "refseq_name": "plastid transcriptionally active 14", "refseq_ac": [ { "id": "NP_193746", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193746", "type": "external" } ], "gene_names_uniprotkb": "PTAC14; F18F4; F1C12.4; PAP7; TAC14", "gene_names_refseq": "F1C12.4; PTAC14; TAC14; plastid transcriptionally active 14", "protein_names_uniprotkb": "Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14; 2.1.1.-; PEP-associated protein 7; Plastid-encoded RNA polymerase-associated protein 7; pTAC14", "protein_names_refseq": "plastid transcriptionally active 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20130)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;16326926;21949211;22010110;22902688;23082802;27862469;33391315", "class_list": "", "function": "Essential for chloroplast development, especially for thylakoid formation. Involved in plastid gene expression, probably by maintaining plastid-encoded RNA polymerase (PEP) activity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49439;O49440;Q0WLK1;Q56YC9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0016279 protein-lysine N-methyltransferase activity;GO:0008168 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000427 plastid-encoded plastid RNA polymerase complex;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0009416 response to light stimulus;GO:0032259 methylation;GO:0009658 chloroplast organization;GO:0009735 response to cytokinin;GO:0010027 thylakoid membrane organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84JF5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWW4-1", "uniprot_id": [ { "id": "GUX2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWW4", "type": "external" } ], "mass": 70059.0, "length": 596, "protein_name": "UDP-glucuronate:xylan alpha-glucuronosyltransferase 2", "gene_name": "GUX2; PGSIP3", "organism": "Arabidopsis", "refseq_name": "plant glycogenin-like starch initiation protein 3", "refseq_ac": [ { "id": "NP_001154284", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154284", "type": "external" } ], "gene_names_uniprotkb": "GUX2; PGSIP3; F17M5.100; F17M5.90; F17M5_90; GUX2; PGSIP3", "gene_names_refseq": "F17M5.90; F17M5_90; GUX2; PGSIP3; glucuronic acid substitution of xylan 2; plant glycogenin-like starch initiation protein 3", "protein_names_uniprotkb": "UDP-glucuronate:xylan alpha-glucuronosyltransferase 2; 2.4.1.-; AtGUX2; Glycogenin-like protein 2; Plant glycogenin-like starch initiation protein 3; Protein GLUCURONIC ACID SUBSTITUTION OF XYLAN 2; UDP-GlcA:xylan glucuronyltransferase 2", "protein_names_refseq": "plant glycogenin-like starch initiation protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33330)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11910074;14593172;20852069;21124849;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Glycosyltransferase required for the addition of both glucuronic acid and 4-O-methylglucuronic acid branches to xylan in stem cell walls. In association with GUX1, is responsible for almost all of the substitutions of the xylan backbone in stem glucuronoxylan., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JW13;Q9SZB0;Q9SZB1", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016757 glycosyltransferase activity;GO:0015020 glucuronosyltransferase activity;GO:0080116 glucuronoxylan glucuronosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0071555 cell wall organization;GO:0009834 plant-type secondary cell wall biogenesis;GO:0010417 glucuronoxylan biosynthetic process;GO:0045492 xylan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GWW4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5V0-1", "uniprot_id": [ { "id": "RPB9B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5V0", "type": "external" } ], "mass": 13107.0, "length": 114, "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 9B", "gene_name": "NRPB9B", "organism": "Arabidopsis", "refseq_name": "RNA polymerases M/15 Kd subunit", "refseq_ac": [ { "id": "NP_567490", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567490", "type": "external" } ], "gene_names_uniprotkb": "NRPB9B; FCAALL; NRPD9B; NRPE9B", "gene_names_refseq": "NRPB9B; NRPD9B; NRPE9B", "protein_names_uniprotkb": "DNA-directed RNA polymerases II, IV and V subunit 9B", "protein_names_refseq": "RNA polymerases M/15 Kd subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16265)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;19110459;21811420;22550619;27862469", "class_list": "", "function": "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements. Required for RNA silencing., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0003899 DNA-directed RNA polymerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005665 RNA polymerase II, core complex;GO:0000418 RNA polymerase IV complex;GO:0000419 RNA polymerase V complex", "go_biological_process": "GO:0001193 maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II;GO:0006367 transcription initiation at RNA polymerase II promoter;GO:0006283 transcription-coupled nucleotide-excision repair;GO:0080188 gene silencing by siRNA-directed DNA methylation;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L5V0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXT5-1", "uniprot_id": [ { "id": "AIPP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXT5", "type": "external" } ], "mass": 66458.0, "length": 587, "protein_name": "ASI1-immunoprecipitated protein 3", "gene_name": "AIPP3", "organism": "Arabidopsis", "refseq_name": "bromo-adjacent homology (BAH) domain-containing protein", "refseq_ac": [ { "id": "NP_192893", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192893", "type": "external" } ], "gene_names_uniprotkb": "AIPP3; BDT1; F25E4.180; F25E4_180; RVR1", "gene_names_refseq": "F25E4.180; F25E4_180", "protein_names_uniprotkb": "ASI1-immunoprecipitated protein 3; AtRVR1; BAH domain-containing transcriptional regulator 1; Bromo-adjacent homology domain-containing protein 1; Protein REPRESSOR OF VERNALIZATION 1", "protein_names_refseq": "bromo-adjacent homology (BAH) domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11560)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "10617198;14593172;18463617;20466843;21768351;23111157;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27113777;27862469;28011693;28584114;28808009;29167316;29654922;30833711;33277495;33433058", "class_list": "", "function": "Transcriptional repressor (PubMed:33433058). Together with PHD finger-containing proteins (e.g. PHD1, PAIPP2/PHD2, AIPP2/PHD3, PHD4, PHD5 and PHD6), cooperates to form a BAH-PHD bivalent histone reader complex able to read histone H3 lysine 27 trimethylation (H3K27me3) and low-methylated H3K4 histone marks in order to regulate transcription, especially to prevent early flowering; H3K27me3 reader of this complex (PubMed:33277495, PubMed:33433058). CPL2 is subsequently recruited to form a BAH-PHD-CPL2 complex (BPC) in order to silence several H3K27me3 and low-methylated H3K4 enriched loci, including AGO5, via the phosphorylation state-dependent inhibition of Pol II release from the transcriptional start site (e.g. Ser5P-Pol II dephosphorylation) (PubMed:33277495, PubMed:33433058). The BPC complex represses flowering by inhibiting the expression of several genes, including AGL6, FT, FUL and SOC1 (PubMed:33277495, PubMed:33433058). Prevents the accumulation of intronic heterochromatin-containing genes (e.g. IBM1, At3g05410 and RPP7) (PubMed:28808009). Does not seem to be involved in vernalization establishment, by contrast to orthologs in grass plants (PubMed:28584114)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LDW8", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0061628 histone H3K27me3 reader activity;GO:0001217 DNA-binding transcription repressor activity;GO:0140566 histone reader activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045814 negative regulation of gene expression, epigenetic;GO:0034244 negative regulation of transcription elongation by RNA polymerase II;GO:2000028 regulation of photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q8RXT5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TH9-1", "uniprot_id": [ { "id": "NLP7_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TH9", "type": "external" } ], "mass": 105742.0, "length": 959, "protein_name": "Protein NLP7", "gene_name": "NLP7", "organism": "Arabidopsis", "refseq_name": "NIN like protein 7", "refseq_ac": [ { "id": "NP_194133", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194133", "type": "external" } ], "gene_names_uniprotkb": "NLP7; NIN like protein 7; T19F6.10; T19F6.16; T19F6_10", "gene_names_refseq": "NIN like protein 7; NLP7; T19F6.10; T19F6_10", "protein_names_uniprotkb": "Protein NLP7; AtNLP7; NIN-like protein 7; Nodule inception protein-like protein 7", "protein_names_refseq": "NIN like protein 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24020)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;15785851;18826430;19633234;20466843;25561503;26744214;27862469", "class_list": "", "function": "Transcription factor involved in regulation of nitrate assimilation and in transduction of the nitrate signal., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22987", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000987 cis-regulatory region sequence-specific DNA binding;GO:0001046 core promoter sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009414 response to water deprivation;GO:0042128 nitrate assimilation;GO:0010118 stomatal movement;GO:0010167 response to nitrate", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84TH9-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RW96-1", "uniprot_id": [ { "id": "2A5G_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RW96", "type": "external" } ], "mass": 59157.0, "length": 522, "protein_name": "Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform", "gene_name": "ATB'; B'GAMMA", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ATB'; B'GAMMA; ATB' GAMMA; FCAALL.118; dl3750w", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; AtB' gamma; PP2A, B' subunit, gamma isoform", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15415)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10091592;10617198;12068121;14593172;19672620;21571669;22041935;23111157;23976921;25307043;25561503;26012558;26517938;27598402;27862469;9128737;9461215", "class_list": "", "function": "The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment (By similarity). Required for the formation of the PP2A holoenzyme that negatively regulates brassinosteroid signaling by dephosphorylating and inactivating BRI1 in the cytoplasm (PubMed:26517938). Seems to be functionally connected with CPR5 and may mediate the negative regulation of defense reactions and senescence under low irradiances. May contribute to the epigenetic regulation of defense gene expression (PubMed:21571669). Involved in the control of methoxylation of indole glucosinolates and formation of 4-methoxy- indol-3-yl-methyl glucosinolate in leaves, through direct interaction with indole glucosinolate methyltransferases (PubMed:27598402). Involved in growth regulation and stress signaling (PubMed:26012558). Involved in the regulation of reactive oxygen species (ROS) signaling and maintenance of cellular ROS homeostasis (PubMed:25307043, PubMed:26012558). Required to control the level of ACO3 phosphorylation in the cytoplasm. Regulates hydrogen peroxide metabolism by controlling the abundance of AOX1A and AXO3/AOX1D in leaf mitochondria (PubMed:25307043). May mediate dephosphorylation of CRT1 and promote the degradation of unfolded proteins in endoplasmic reticulum (ER) (PubMed:22041935). Involved in the regulation of flowering time by repressing FLC, the main flowering repressor gene (PubMed:23976921)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed, PubMed]; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04377;O23394", "ec_number_list": [], "go_molecular_function": "GO:0072542 protein phosphatase activator activity;GO:0008266 poly(U) RNA binding;GO:0019888 protein phosphatase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000159 protein phosphatase type 2A complex", "go_biological_process": "GO:0006952 defense response;GO:2000377 regulation of reactive oxygen species metabolic process;GO:0006555 methionine metabolic process;GO:0033353 S-adenosylmethionine cycle;GO:0051177 meiotic sister chromatid cohesion", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8RW96-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S3D1-1", "uniprot_id": [ { "id": "BH068_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S3D1", "type": "external" } ], "mass": 44584.0, "length": 407, "protein_name": "Transcription factor bHLH68", "gene_name": "BHLH68", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_194639", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194639", "type": "external" } ], "gene_names_uniprotkb": "BHLH68; EN60; F19B15.130; F19B15_130", "gene_names_refseq": "F19B15.130; F19B15_130", "protein_names_uniprotkb": "Transcription factor bHLH68; AtbHLH68; Basic helix-loop-helix protein 68; Transcription factor EN 60; bHLH 68; bHLH transcription factor bHLH068", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29100)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;12679534;12897250;14593172;14600211;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZD9", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8S3D1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWS0-1", "uniprot_id": [ { "id": "GRXC5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWS0", "type": "external" } ], "mass": 18814.0, "length": 174, "protein_name": "Glutaredoxin-C5, chloroplastic", "gene_name": "GRXC5", "organism": "Arabidopsis", "refseq_name": "Glutaredoxin family protein", "refseq_ac": [ { "id": "NP_194602", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194602", "type": "external" } ], "gene_names_uniprotkb": "GRXC5; F16A16.160; F16A16_160; GrxC5; glutaredoxin C5", "gene_names_refseq": "F16A16.160; F16A16_160; GrxC5; glutaredoxin C5", "protein_names_uniprotkb": "Glutaredoxin-C5, chloroplastic; AtGrxC5", "protein_names_refseq": "Glutaredoxin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28730)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11910074;14593172;15170506;16720602;21632542;22223895;24203231;27862469", "class_list": "", "function": "Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. Can assemble a [2Fe-2S] cluster, but cannot transfer it to an apoferredoxin., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVU1", "ec_number_list": [], "go_molecular_function": "GO:0015038 glutathione disulfide oxidoreductase activity;GO:0004362 glutathione-disulfide reductase (NADPH) activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0034599 cellular response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GWS0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXV3-1", "uniprot_id": [ { "id": "P2C59_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXV3", "type": "external" } ], "mass": 33248.0, "length": 311, "protein_name": "Probable protein phosphatase 2C 59", "gene_name": "WIN2", "organism": "Arabidopsis", "refseq_name": "HOPW1-1-interacting 2", "refseq_ac": [ { "id": "NP_001328538", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328538", "type": "external" } ], "gene_names_uniprotkb": "WIN2; F28M20.60; F28M20_60; HOPW1-1-interacting 2", "gene_names_refseq": "F28M20.60; F28M20_60; HOPW1-1-interacting 2; WIN2", "protein_names_uniprotkb": "Probable protein phosphatase 2C 59; 3.1.3.16; AtPP2C59; HopW1-1-interacting protein 2; PP2C WIN2; Protein phosphatase 2C WIN2", "protein_names_refseq": "HOPW1-1-interacting 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31750)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;17317660;18266921;19021904;23111157;27862469", "class_list": "", "function": "Protein phosphatase that modulates defense response to pathogenic bacteria, conferring resistance and promoting salicylic acid (SA) accumulation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81773", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006470 protein dephosphorylation;GO:0042742 defense response to bacterium;GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RXV3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYA4-1", "uniprot_id": [ { "id": "CRK10_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYA4", "type": "external" } ], "mass": 74283.0, "length": 669, "protein_name": "Cysteine-rich receptor-like protein kinase 10", "gene_name": "CRK10", "organism": "Arabidopsis", "refseq_name": "cysteine-rich RLK (RECEPTOR-like protein kinase) 10", "refseq_ac": [ { "id": "NP_567679", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567679", "type": "external" } ], "gene_names_uniprotkb": "CRK10; F21P8.70; F21P8_70; RLK4", "gene_names_refseq": "CRK10; F21P8.70; F21P8_70; RLK4; cysteine-rich RLK (RECEPTOR-like protein kinase) 10", "protein_names_uniprotkb": "Cysteine-rich receptor-like protein kinase 10; 2.7.11.-; Cysteine-rich RLK10; Receptor-like protein kinase 4", "protein_names_refseq": "cysteine-rich RLK (RECEPTOR-like protein kinase) 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23180)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11100776;11135117;11402176;11910074;14593172;15604743;17317660;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 8, "predicted_n_glycosites": 8, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "O65470;Q8H785;Q9C5T0", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0042742 defense response to bacterium;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GYA4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX72-1", "uniprot_id": [ { "id": "AMPL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX72", "type": "external" } ], "mass": 61290.0, "length": 581, "protein_name": "Leucine aminopeptidase 3, chloroplastic", "gene_name": "LAP3", "organism": "Arabidopsis", "refseq_name": "Cytosol aminopeptidase family protein", "refseq_ac": [ { "id": "NP_194820", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194820", "type": "external" } ], "gene_names_uniprotkb": "LAP3; F6I18.180; F6I18_180", "gene_names_refseq": "F6I18.180; F6I18_180", "protein_names_uniprotkb": "Leucine aminopeptidase 3, chloroplastic; 3.4.11.1; 3.4.11.5; AtLAP3; Leucyl aminopeptidase 3; Proline aminopeptidase 3; Prolyl aminopeptidase 3", "protein_names_refseq": "Cytosol aminopeptidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30910)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;22060019;25716890;27862469", "class_list": "", "function": "Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity). Possesses Cys-Gly dipeptidase activity (PubMed:25716890)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O65558", "ec_number_list": [], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0030145 manganese ion binding;GO:0070006 metalloaminopeptidase activity;GO:0008233 peptidase activity;GO:0016805 dipeptidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8RX72-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYB9-1", "uniprot_id": [ { "id": "JMJ27_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYB9", "type": "external" } ], "mass": 96105.0, "length": 840, "protein_name": "Lysine-specific demethylase JMJ27", "gene_name": "JMJ27", "organism": "Arabidopsis", "refseq_name": "Transcription factor jumonji (jmjC) domain-containing protein", "refseq_ac": [ { "id": "NP_192008", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192008", "type": "external" } ], "gene_names_uniprotkb": "JMJ27; F3I3", "gene_names_refseq": "", "protein_names_uniprotkb": "Lysine-specific demethylase JMJ27; 1.14.11.65; AtJMJ27; Jumonji domain-containing protein 27; Lysine-specific histone demethylase JMJ27; Protein JUMONJI 27; [histone H3]-dimethyl-L-lysine(9) monodemethylase JMJ27", "protein_names_refseq": "Transcription factor jumonji (jmjC) domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00990)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;18713399;25561503;27862469;28650521;34197643", "class_list": "", "function": "Histone demethylase that demethylates 'Lys-9' (H3K9me) of histone H3 with a specific activity for H3K9me1 and H3K9me2 (PubMed:28650521, PubMed:34197643). No activity on H3K4, H3K27, H3K36, H3R2 and H4R3 methyl marks, but weak activity on H3K9me3 (PubMed:28650521, PubMed:34197643). Involved in regulation of gene expression (PubMed:28650521). Regulates flowering time by repressing the major flowering regulator CONSTANS (CO) and promoting FLOWERING LOCUS C (FLC) (PubMed:28650521). Exhibits a positive impact on abscisic acid- (ABA), hydrogen peroxide- (H(2)O(2)) and calcium- (Ca(2+)) induced stomatal closure (PubMed:34197643). Promotes stomatal-closure-dependent drought-stress responses through its histone demethylase activity toward at least GOLS2 and RD20 loci, thus protecting them from silencing by removing H3K9me2 marks in drought conditions (PubMed:34197643). Required for plant defenses leading to resistance against the virulent bacterial pathogen Pseudomonas syringae pv. tomato DC3000 (Pst DC3000) via a negative regulation of WRKY25 (a repressor of defense) and by triggering the expression of several pathogenesis-related (PR) proteins (e.g. PR1, PR3, PR4 and PR5) (PubMed:28650521)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SV29", "ec_number_list": [ { "id": "1.14.11.65", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.65", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0031490 chromatin DNA binding;GO:0003712 transcription coregulator activity;GO:0032454 histone H3K9 demethylase activity;GO:0140683 histone H3K9me/H3K9me2 demethylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000785 chromatin;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0009617 response to bacterium;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation;GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VYB9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZ52-1", "uniprot_id": [ { "id": "AB30G_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZ52", "type": "external" } ], "mass": 157768.0, "length": 1400, "protein_name": "ABC transporter G family member 30", "gene_name": "ABCG30", "organism": "Arabidopsis", "refseq_name": "pleiotropic drug resistance 2", "refseq_ac": [ { "id": "NP_001319944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319944", "type": "external" } ], "gene_names_uniprotkb": "ABCG30; ATP-binding cassette G30; ATPDR2; DL3660W; FCAALL.241; PDR2; dl3655w; pleiotropic drug resistance 2", "gene_names_refseq": "ABCG30; ATP-binding cassette G30; ATPDR2; DL3660W; FCAALL.241; PDR2; pleiotropic drug resistance 2", "protein_names_uniprotkb": "ABC transporter G family member 30; ABC transporter ABCG.30; AtABCG30; AtPDR2; Pleiotropic drug resistance protein 2", "protein_names_refseq": "pleiotropic drug resistance 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15230)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11910074;12430018;16506311;18299247;19854857;26334616;27862469;9461215", "class_list": "", "function": "Together with ABCG40, import into the embryo the abscisic acid (ABA) delivered from the endosperm via ABCG25 and ABCG31-mediated export to suppress radicle extension and subsequent embryonic growth (PubMed:26334616). Involved in root secretion of phytochemicals (phenolics and sugars) which regulate soil microbiota, influencing both fungal and bacterial communities (PubMed:19854857). May be a general defense protein (By similarity)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "O23376;O23377;Q7PC89", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0015562 efflux transmembrane transporter activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0033231 carbohydrate export;GO:0098657 import into cell;GO:0010496 intercellular transport;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GZ52-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7S5-1", "uniprot_id": [ { "id": "IPGA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7S5", "type": "external" } ], "mass": 71613.0, "length": 642, "protein_name": "Protein INCREASED PETAL GROWTH ANISOTROPY 1", "gene_name": "IPGA1", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": [ { "id": "NP_193591", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193591", "type": "external" } ], "gene_names_uniprotkb": "IPGA1; F28J12.220; F28J12.8", "gene_names_refseq": "F28J12.8", "protein_names_uniprotkb": "Protein INCREASED PETAL GROWTH ANISOTROPY 1", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18570)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;19376835;25561503;27862469;31198941;31623377;35975703", "class_list": "", "function": "Microtubule-associated protein involved in the regulation of anisotropic petal and cotyledons growth and shape by affecting cortical microtubule organization (PubMed:31198941, PubMed:31623377, PubMed:35975703). Prevents cortical microtubules organization into parallel arrays oriented perpendicular to the axis of cell elongation thus limiting anisotropic cell growth in the late phases of petal development (PubMed:31198941, PubMed:31623377, PubMed:35975703). Cooperatively with ANGUSTIFOLIA (AN), negatively regulates cortical microtubules (CMTs) organization in response to mechanical stress and modulates pavement cells morphogenesis leading to puzzle shape, probably in an AAA1/KTN1-dependent manner (PubMed:35975703)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49524", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005874 microtubule;GO:0005886 plasma membrane", "go_biological_process": "GO:0071260 cellular response to mechanical stimulus;GO:0043622 cortical microtubule organization;GO:0048446 petal morphogenesis;GO:0048826 cotyledon morphogenesis;GO:0051211 anisotropic cell growth", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L7S5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WV9-1", "uniprot_id": [ { "id": "QPCT_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WV9", "type": "external" } ], "mass": 36269.0, "length": 320, "protein_name": "Glutaminyl-peptide cyclotransferase", "gene_name": "QCT; QC", "organism": "Arabidopsis", "refseq_name": "glutaminyl cyclase", "refseq_ac": [ { "id": "NP_001031716", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031716", "type": "external" } ], "gene_names_uniprotkb": "QCT; QC; ATQC; GLUTAMINYL CYCLOTRANSFERASE; L73G19.100; L73G19_100; QCT; QC; glutaminyl cyclase", "gene_names_refseq": "ARABIDOPSIS THALIANA GLUTAMINYL CYCLASE; ATQC; GLUTAMINYL CYCLOTRANSFERASE; L73G19.100; L73G19_100; QCT; QC; glutaminyl cyclase", "protein_names_uniprotkb": "Glutaminyl-peptide cyclotransferase; 2.3.2.5; Glutaminyl cyclase", "protein_names_refseq": "glutaminyl cyclase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25720)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;17261077;18768907;19423640;27862469", "class_list": "", "function": "Converts glutamine and N-terminal glutamyl residues in peptides to 5-oxoproline and 5-oxoproline residues. Not involved in the major pathway for 5-oxoproline production., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q2V3F0;Q8LFT4;Q9T000", "ec_number_list": [ { "id": "2.3.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.5", "type": "external" } ], "go_molecular_function": "GO:0016603 glutaminyl-peptide cyclotransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84WV9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S3D5-1", "uniprot_id": [ { "id": "LRL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S3D5", "type": "external" } ], "mass": 32880.0, "length": 310, "protein_name": "Transcription factor LRL2", "gene_name": "LRL2", "organism": "Arabidopsis", "refseq_name": "LJRHL1-like 2", "refseq_ac": [ { "id": "NP_001320095", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320095", "type": "external" } ], "gene_names_uniprotkb": "LRL2; BHLH69; DROP2; EN94; F6I18.110; F6I18_110; LJRHL1-like 2", "gene_names_refseq": "F6I18.110; F6I18_110; LJRHL1-like 2; LRL2", "protein_names_uniprotkb": "Transcription factor LRL2; AtLRL2; AtbHLH69; Basic helix-loop-helix protein 69; Protein DEFECTIVE REGION OF POLLEN 2; Protein LJRHL1- LIKE 2; Transcription factor EN 94; Transcription factor bHLH69; bHLH 69; bHLH transcription factor bHLH069", "protein_names_refseq": "LJRHL1-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30980)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12679534;12897250;14600211;19675148;27862469;28585562", "class_list": "", "function": "Transcription factor that regulates the development of root hairs (PubMed:19675148). Transcription factor that regulates the development of sperm cells (PubMed:28585562)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178UUJ2;C0SVK8;O65552", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0048235 pollen sperm cell differentiation;GO:0048765 root hair cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8S3D5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VV6-1", "uniprot_id": [ { "id": "HINT4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VV6", "type": "external" } ], "mass": 16798.0, "length": 146, "protein_name": "Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4", "gene_name": "HINT4", "organism": "Arabidopsis", "refseq_name": "histidine triad nucleotide-binding 4", "refseq_ac": [ { "id": "NP_567507", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567507", "type": "external" } ], "gene_names_uniprotkb": "HINT4; dl4305c", "gene_names_refseq": "HINT4; histidine triad nucleotide-binding 4", "protein_names_uniprotkb": "Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4; 2.7.7.5; 3.6.2.1; 5'-adenylyl sulfate phosphorylase HINT4; APS phosphorylase; Adenylylsulfate:phosphate adenylyltransferase HINT4; Histidine triad nucleotide-binding protein 4", "protein_names_refseq": "histidine triad nucleotide-binding 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16566)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;19329564;19896942;27862469;9461215", "class_list": "", "function": "Possesses adenylylsulfatase activity in vitro, releasing AMP and sulfate from adenylyl sulfate. Also possesses adenosine 5'-phosphosulfate (APS) phosphorylase activity in vitro. Catalyzes the phosphorolysis of APS, leading to ADP and sulfate., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23500;Q8L9E2", "ec_number_list": [ { "id": "3.6.2.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.2.1", "type": "external" }, { "id": "3.6.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.29", "type": "external" }, { "id": "3.9.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.9.1.-", "type": "external" }, { "id": "2.7.7.51", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.51", "type": "external" }, { "id": "2.7.7.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.5", "type": "external" } ], "go_molecular_function": "GO:0000166 nucleotide binding;GO:0047627 adenylylsulfatase activity;GO:0004780 sulfate adenylyltransferase (ADP) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005777 peroxisome;GO:0005829 cytosol", "go_biological_process": "GO:0006790 sulfur compound metabolic process;GO:0009150 purine ribonucleotide metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84VV6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWG1-1", "uniprot_id": [ { "id": "AB1K1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWG1", "type": "external" } ], "mass": 76757.0, "length": 682, "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic", "gene_name": "ABC1K1; ACDO1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001031763", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031763", "type": "external" } ], "gene_names_uniprotkb": "ABC1K1; ACDO1; ABC1-like kinase 1; ABC1K1; ACDO1; AtACDO1; BDR1; F3L17.6; PGR6; PROTON GRADIENT REGULATION 6", "gene_names_refseq": "ABC1-like kinase 1; ABC1-like kinase related to chlorophyll degradation and oxidative stress 1; ABC1K1; ACDO1; AtACDO1; F3L17.6; PGR6; PROTON GRADIENT REGULATION 6", "protein_names_uniprotkb": "Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic; 2.7.-.-; 2.7.11.1; ABC1-LIKE KINASE 1; AtACDO1; Protein ABC1-LIKE KINASE RELATED TO CHLOROPHYLL DEGRADATION AND OXIDATIVE STRESS 1; Protein BLEACHING AND DWARF IN RED LIGHT 1; Protein PROTON GRADIENT REGULATION 6", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31390)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;16461379;22274653;22447966;23673981;24267661;25882344;27862469", "class_list": "", "function": "Kinase that can phosphorylate the tocopherol cyclase VTE1, a key enzyme of tocopherol (vitamin E) metabolism and involved in the recycling of oxidated alpha-tocopherol quinone, possibly stabilizing it at plastoglobules. Also regulates plastoglobule protein composition (PubMed:24267661). Prevents photodamage of chloroplasts under continuous red light, thus working in opposition to ABC1K3 (PubMed:25882344). Together with ABC1K1, contributes to plastoglobule (PG) function in prenyl-lipid metabolism, stress response, and thylakoid remodeling (PubMed:23673981, PubMed:24267661). Involved in chlorophyll degradation and in the maintenance of the number of chlorophyll-binding photosynthetic thylakoid membranes (PubMed:22447966). Ensures photosynthetic electron transport by regulating the homeostasis of plastoquinone, beta-carotene and xanthophyll lutein, as well as membrane antioxidant tocopherol metabolism (PubMed:24267661). Seems to affect specifically stability or turnover of D1 protein, product of psbA, one of the four core subunits of the photosystem II (PSII) (PubMed:25882344). Required for photooxidative stress responses, including the induction of oxidative stress response genes (e.g. FSD1, CSD1, CAT1, and UTG71C1), to prevent photosystem II core and chlorophyll degradations (PubMed:22447966, PubMed:23673981, PubMed:24267661)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49588", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0010287 plastoglobule", "go_biological_process": "GO:0009414 response to water deprivation;GO:0006995 cellular response to nitrogen starvation;GO:0009637 response to blue light;GO:1901562 response to paraquat;GO:0010114 response to red light", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RWG1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WK4-1", "uniprot_id": [ { "id": "SOBR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WK4", "type": "external" } ], "mass": 24845.0, "length": 228, "protein_name": "Carboxylesterase SOBER1", "gene_name": "SOBER1", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001190797", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190797", "type": "external" } ], "gene_names_uniprotkb": "SOBER1", "gene_names_refseq": "", "protein_names_uniprotkb": "Carboxylesterase SOBER1; 3.1.1.-; Phospholipase A2 SOBER1; Protein SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22305)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;17293566;19918071;27862469", "class_list": "", "function": "Possesses carboxylesterase activity in vitro with a preference for short acyl chain substrates. Functions as a negative regulator of the hypersensitive response (HR) triggered by the bacterial type III effector protein AvrBsT (PubMed:17293566). Possesses phospholipase A2 (PLA2) activity and hydrolyzes phosphatidylcholine (PC), a lipid that is hydrolyzed by phospholipase D (PLD) to produce phosphatidic acid (PA). Required to suppress AvrBsT-dependent HR and PLD-dependent production of PA in response to AvrBsT elicitation (PubMed:19918071)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A4KWB0;O49635", "ec_number_list": [], "go_molecular_function": "GO:0052689 carboxylic ester hydrolase activity;GO:0004623 phospholipase A2 activity;GO:0034338 short-chain carboxylesterase activity;GO:0106435 carboxylesterase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006631 fatty acid metabolic process;GO:0006654 phosphatidic acid biosynthetic process;GO:0042742 defense response to bacterium;GO:0010363 regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84WK4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWJ7-1", "uniprot_id": [ { "id": "CRK19_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWJ7", "type": "external" } ], "mass": 71620.0, "length": 645, "protein_name": "Cysteine-rich receptor-like protein kinase 19", "gene_name": "CRK19", "organism": "Arabidopsis", "refseq_name": "cysteine-rich RLK (RECEPTOR-like protein kinase) 19", "refseq_ac": [ { "id": "NP_001329528", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329528", "type": "external" } ], "gene_names_uniprotkb": "CRK19; F21P8.160; F21P8_160", "gene_names_refseq": "CRK19; F21P8.160; F21P8_160; cysteine-rich RLK (RECEPTOR-like protein kinase) 19", "protein_names_uniprotkb": "Cysteine-rich receptor-like protein kinase 19; 2.7.11.-; Cysteine-rich RLK19", "protein_names_refseq": "cysteine-rich RLK (RECEPTOR-like protein kinase) 19", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23270)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11402176;11910074;15604743;17317660;26930070;27862469", "class_list": "", "function": "", "predicted_glycosites": 8, "predicted_n_glycosites": 7, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "O65478", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0042742 defense response to bacterium;GO:0009751 response to salicylic acid;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GWJ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84V22-1", "uniprot_id": [ { "id": "PSD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84V22", "type": "external" } ], "mass": 50560.0, "length": 453, "protein_name": "Phosphatidylserine decarboxylase proenzyme 1, mitochondrial", "gene_name": "PSD1", "organism": "Arabidopsis", "refseq_name": "phosphatidylserine decarboxylase 1", "refseq_ac": [ { "id": "NP_193403", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193403", "type": "external" } ], "gene_names_uniprotkb": "PSD1; DL4375C; FCAALL.4; dl4375c", "gene_names_refseq": "DL4375C; FCAALL.4; PSD1; phosphatidylserine decarboxylase 1", "protein_names_uniprotkb": "Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; 4.1.1.65", "protein_names_refseq": "phosphatidylserine decarboxylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16700)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;12857846;17449644;27862469;9461215", "class_list": "", "function": "Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Contributes only to a minor proportion of PtdEtn production., [UniProtKB, PubMed, PubMed, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23513", "ec_number_list": [ { "id": "4.1.1.65", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.65", "type": "external" } ], "go_molecular_function": "GO:0004609 phosphatidylserine decarboxylase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0016540 protein autoprocessing;GO:0006646 phosphatidylethanolamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84V22-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX88-1", "uniprot_id": [ { "id": "FACE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX88", "type": "external" } ], "mass": 48482.0, "length": 424, "protein_name": "CAAX prenyl protease 1 homolog", "gene_name": "ATSTE24; FACE1", "organism": "Arabidopsis", "refseq_name": "Peptidase family M48 family protein", "refseq_ac": [ { "id": "NP_567212", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567212", "type": "external" } ], "gene_names_uniprotkb": "ATSTE24; FACE1; A_IG002N01.21; F2N1.21; F2N1_21; STE24", "gene_names_refseq": "ATSTE24; F2N1.21; F2N1_21; STE24", "protein_names_uniprotkb": "CAAX prenyl protease 1 homolog; 3.4.24.84; AtFACE-1; AtSTE24; FACE-1; Farnesylated proteins-converting enzyme 1; Prenyl protein-specific endoprotease 1; Zinc metalloproteinase Ste24 homolog", "protein_names_refseq": "Peptidase family M48 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G01320)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;12039957;12928436;14593172;18641086;27862469", "class_list": "", "function": "Proteolytically removes the C-terminal three residues of farnesylated proteins., [UniProtKB, UniProtKB]; Proteolytically removes the C-terminal three residues of farnesylated proteins. The substrate specificity is only partially overlapping with that of FACE2., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04602;Q93ZV9;Q94FS8;Q9M139", "ec_number_list": [], "go_molecular_function": "GO:0004175 endopeptidase activity;GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005789 endoplasmic reticulum membrane;GO:0005773 vacuole;GO:0009507 chloroplast", "go_biological_process": "GO:0071586 CAAX-box protein processing;GO:0080120 CAAX-box protein maturation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RX88-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZ38-1", "uniprot_id": [ { "id": "UNE10_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZ38", "type": "external" } ], "mass": 43365.0, "length": 399, "protein_name": "Transcription factor UNE10", "gene_name": "UNE10", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_191916", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191916", "type": "external" } ], "gene_names_uniprotkb": "UNE10; BHLH16; EN108; F6N15.11; F6N15_11; PIF8; unfertilized embryo sac 10", "gene_names_refseq": "F6N15.11; F6N15_11; UNE10; unfertilized embryo sac 10", "protein_names_uniprotkb": "Transcription factor UNE10; AtbHLH16; Basic helix-loop-helix protein 16; Phytochrome-interacting factor 8; Protein UNFERTILIZED EMBRYO SAC 10; Transcription factor EN 108; bHLH 16; bHLH transcription factor bHLH016", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00050)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11910074;12679534;12897250;14600211;15634699;23708772;25944101;27862469;31732705", "class_list": "", "function": "Transcription factor binding to G-box elements (5'-CACGTG-3') in target genes promoters, particularly in far-red light but barely in the dark (PubMed:31732705). Required during the fertilization of ovules by pollen (PubMed:15634699). Repressor of phytochrome A-mediated far-red light responses including seed germination, suppression of hypocotyl elongation, and randomization of hypocotyl growth orientation (PubMed:31732705). Does not inhibit phyB-induced red light responses (PubMed:31732705)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81306;Q8S3F4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009506 plasmodesma", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009416 response to light stimulus;GO:0009637 response to blue light;GO:0009567 double fertilization forming a zygote and endosperm", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GZ38-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L710-1", "uniprot_id": [ { "id": "CRK17_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L710", "type": "external" } ], "mass": 76354.0, "length": 686, "protein_name": "Cysteine-rich receptor-like protein kinase 17", "gene_name": "CRK17; EMB1290", "organism": "Arabidopsis", "refseq_name": "cysteine-rich receptor-like protein kinase 17", "refseq_ac": [ { "id": "NP_001320042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320042", "type": "external" } ], "gene_names_uniprotkb": "CRK17; EMB1290; CRK17; DUF26-21; EMB1290; EMBRYO DEFECTIVE 1290; F21P8.140; F21P8_140; RKC1", "gene_names_refseq": "CRK17; CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 17; DUF26-21; EMB1290; EMBRYO DEFECTIVE 1290; F21P8.140; F21P8_140; RECEPTOR-LIKE KINASE THALIANACOL- 0GENOMICLIBRARY(CLONTECH).THEPOSITIVEPHAGECLONES C-X8-C-X2-C CLASS 1; RKC1", "protein_names_uniprotkb": "Cysteine-rich receptor-like protein kinase 17; 2.7.11.-; Cysteine-rich RLK17; Protein EMBRYO DEFECTIVE 1290", "protein_names_refseq": "cysteine-rich receptor-like protein kinase 17", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23250)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11100776;11402176;14593172;17317660;25561503;27862469;29654922", "class_list": "", "function": "", "predicted_glycosites": 10, "predicted_n_glycosites": 10, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "F4JNH0;Q9SBC6;Q9SVG2", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0046777 protein autophosphorylation;GO:0042742 defense response to bacterium;GO:0009626 plant-type hypersensitive response;GO:0006950 response to stress", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L710-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JK2-1", "uniprot_id": [ { "id": "FD_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JK2", "type": "external" } ], "mass": 31377.0, "length": 285, "protein_name": "Protein FD", "gene_name": "FD", "organism": "Arabidopsis", "refseq_name": "Basic-leucine zipper (bZIP) transcription factor family protein", "refseq_ac": [ { "id": "NP_001329774", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329774", "type": "external" } ], "gene_names_uniprotkb": "FD; BZIP14; F4B14.170; FD-1; T19K4.30; atbzip14", "gene_names_refseq": "FD-1; FD; T19K4.30; atbzip14", "protein_names_uniprotkb": "Protein FD; AtbZIP14; bZIP transcription factor 14", "protein_names_refseq": "Basic-leucine zipper (bZIP) transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35900)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11906833;12084834;16099979;16099980;25661797;27862469", "class_list": "", "function": "Transcription factor required for the transition to flowering promoted by FT., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65627;Q84JC9;Q84K49;Q84K53", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009648 photoperiodism;GO:2000028 regulation of photoperiodism, flowering;GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84JK2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY26-1", "uniprot_id": [ { "id": "CCD8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY26", "type": "external" } ], "mass": 63957.0, "length": 570, "protein_name": "Carotenoid cleavage dioxygenase 8, chloroplastic", "gene_name": "CCD8", "organism": "Arabidopsis", "refseq_name": "carotenoid cleavage dioxygenase 8", "refseq_ac": [ { "id": "NP_195007", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195007", "type": "external" } ], "gene_names_uniprotkb": "CCD8; ATCCD8; MAX4; MORE AXILLARY BRANCHING 4; NCED8; T16I18.20; T16I18_20", "gene_names_refseq": "ATCCD8; CCD8; MAX4; MORE AXILLARY BRANCHING 4; T16I18.20; T16I18_20; carotenoid cleavage dioxygenase 8", "protein_names_uniprotkb": "Carotenoid cleavage dioxygenase 8, chloroplastic; 1.13.11.69; 1.13.11.70; AtCCD8; AtNCED8; Protein MORE AXILLARY BRANCHING 4; Protein MORE AXILLARY GROWTH 4", "protein_names_refseq": "carotenoid cleavage dioxygenase 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32810)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;12815068;14593172;15342640;16262707;16507088;18637791;21243360;22422982;23204501;27194725;27862469;30865619", "class_list": "", "function": "Involved in strigolactones biosynthesis by cleaving the C(27) 9-cis-10'-apo-beta-carotenal produced by CCD7 (PubMed:27194725). Produces the C(19) carlactone and a C(8) hydroxyaldehyde. Also shows lower activity with all-trans-10'-apo-beta-carotenal producing a C(9) dialdehyde and the C(18) 13-apo-beta-carotenone. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds (PubMed:27194725, PubMed:30865619). Also active on other carotenoid substrates like licopene or zeaxanthin., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M079", "ec_number_list": [ { "id": "1.13.11.69", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.69", "type": "external" }, { "id": "1.13.11.70", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.70", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0010436 carotenoid dioxygenase activity;GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0102251 all-trans-beta-apo-10'-carotenal cleavage oxygenase activity;GO:0102396 9-cis-10'-apo-beta-carotenal cleavage oxygenase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009635 response to herbicide;GO:0016121 carotene catabolic process;GO:0016124 xanthophyll catabolic process;GO:0009733 response to auxin;GO:0009926 auxin polar transport", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8VY26-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L540-1", "uniprot_id": [ { "id": "LTO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L540", "type": "external" } ], "mass": 40401.0, "length": 376, "protein_name": "Thiol-disulfide oxidoreductase LTO1", "gene_name": "LTO1", "organism": "Arabidopsis", "refseq_name": "NAD(P)H dehydrogenase (quinone)s", "refseq_ac": [ { "id": "NP_567988", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567988", "type": "external" } ], "gene_names_uniprotkb": "LTO1; F4B14.2; F8D20.270; Lumen Thiol Oxidoreductase 1; VKOR", "gene_names_refseq": "F4B14.2; LTO1; Lumen Thiol Oxidoreductase 1", "protein_names_uniprotkb": "Thiol-disulfide oxidoreductase LTO1; 1.17.4.-; Protein LUMEN THIOL OXIDOREDUCTASE 1; Vitamin K reductase", "protein_names_refseq": "NAD(P)H dehydrogenase (quinone)s", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35760)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;20626653;21781282;22209765;23689258;25412899;27862469", "class_list": "", "function": "Thiol-disulfide oxidoreductase catalyzing disulfide bond formation of chloroplast proteins and involved in redox regulation and photosynthetic electron transport. Required for the assembly of photosystem II (PSII) through the formation of disulfide bond in PSBO, a subunit of the PSII oxygen-evolving complex in the thylakoid lumen. Involved in the formation of disulfide bonds in the lumenal protein FKBP13. In vitro, reduces phylloquinone (vitamin K1) and menaquinone (vitamin K2) to their respective quinol. Cannot reduce phylloquinone epoxide to phylloquinone (PubMed:20626653, PubMed:21781282, PubMed:22209765, PubMed:23689258). Plays an important role in regulating the thylakoid lumen redox (PubMed:25412899)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81807;Q8L9V9", "ec_number_list": [], "go_molecular_function": "GO:0048038 quinone binding;GO:0003955 NAD(P)H dehydrogenase (quinone) activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0016020 membrane", "go_biological_process": "GO:0010207 photosystem II assembly", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L540-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LD38-1", "uniprot_id": [ { "id": "MPC3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LD38", "type": "external" } ], "mass": 12181.0, "length": 108, "protein_name": "Mitochondrial pyruvate carrier 3", "gene_name": "MPC3; NRGA1", "organism": "Arabidopsis", "refseq_name": "pyruvate carrier-like protein", "refseq_ac": [ { "id": "NP_001031587", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031587", "type": "external" } ], "gene_names_uniprotkb": "MPC3; NRGA1; DiDi 19A-1b; F6H8.10; F6H8_10; NRGA1", "gene_names_refseq": "F6H8.10; F6H8_10; NRGA1; Negative Regulator of Guard Cell ABA Signaling 1", "protein_names_uniprotkb": "Mitochondrial pyruvate carrier 3; Protein NEGATIVE REGULATOR OF GUARD CELL ABA SIGNALING 1", "protein_names_refseq": "pyruvate carrier-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G05590)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11277426;14593172;19423640;24842572;27862469", "class_list": "", "function": "Mediates the uptake of pyruvate into mitochondria., [UniProtKB, UniProtKB]; Mediates the uptake of pyruvate into mitochondria. Negatively regulates ABA-induced guard cell signaling and mediates drought stress responses., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84VZ9;Q9M0U5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006850 pyruvate import into mitochondria;GO:2000070 regulation of response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LD38-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L617-1", "uniprot_id": [ { "id": "SZE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L617", "type": "external" } ], "mass": 35005.0, "length": 313, "protein_name": "Serine/threonine-protein kinase SZE1", "gene_name": "SZE1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_197926", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197926", "type": "external" } ], "gene_names_uniprotkb": "SZE1; F18G18.180; F18G18_180", "gene_names_refseq": "F18G18.180; F18G18_180", "protein_names_uniprotkb": "Serine/threonine-protein kinase SZE1; 2.7.11.1; Protein SUPPRESSOR OF ZED1-D1; Receptor-like cytoplasmic kinase SZE1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25440)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;27862469;30947022", "class_list": "", "function": "Together with BKN2/SZE2 and ZED1, required for effector-triggered immunity (e.g. Pseudomonas syringae effector type III HopZ1a) via the activation of ZAR1, thus being essential for resistance against P.syringae pv. tomato DC3000 expressing HopZ1a., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0006952 defense response;GO:0046777 protein autophosphorylation;GO:1900426 positive regulation of defense response to bacterium;GO:0002757 immune response-activating signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8L617-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWW7-1", "uniprot_id": [ { "id": "AGUA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWW7", "type": "external" } ], "mass": 43155.0, "length": 383, "protein_name": "Agmatine deiminase", "gene_name": "AIH; EMB1873", "organism": "Arabidopsis", "refseq_name": "porphyromonas-type peptidyl-arginine deiminase family protein", "refseq_ac": [ { "id": "NP_196434", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196434", "type": "external" } ], "gene_names_uniprotkb": "AIH; EMB1873; AGMATINE IMINOHYDROLASE; ATAIH; EMB1873; EMBRYO DEFECTIVE 1873; T22D6.110; T22D6_110", "gene_names_refseq": "AGMATINE IMINOHYDROLASE; ATAIH; EMB1873; EMBRYO DEFECTIVE 1873; T22D6.110; T22D6_110", "protein_names_uniprotkb": "Agmatine deiminase; 3.5.3.12; Agmatine iminohydrolase; Protein EMBRYO DEFECTIVE 1873", "protein_names_refseq": "porphyromonas-type peptidyl-arginine deiminase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08170)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11910074;12782327;12914918;14593172;17850744;23111157;27862469", "class_list": "", "function": "Mediates the hydrolysis of agmatine into N-carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94IC7;Q9LEZ0", "ec_number_list": [ { "id": "3.5.3.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.3.12", "type": "external" } ], "go_molecular_function": "GO:0004668 protein-arginine deiminase activity;GO:0047632 agmatine deiminase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0006596 polyamine biosynthetic process;GO:0033388 putrescine biosynthetic process from arginine;GO:0009446 putrescine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GWW7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUK1-1", "uniprot_id": [ { "id": "DGS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUK1", "type": "external" } ], "mass": 68894.0, "length": 602, "protein_name": "Protein DGS1, mitochondrial", "gene_name": "DGS1", "organism": "Arabidopsis", "refseq_name": "dgd1 suppressor 1", "refseq_ac": [ { "id": "NP_001330600", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001330600", "type": "external" } ], "gene_names_uniprotkb": "DGS1; DGD1 SUPPRESSOR 1; T2L20", "gene_names_refseq": "DGD1 SUPPRESSOR 1; DGS1", "protein_names_uniprotkb": "Protein DGS1, mitochondrial; Protein DGD1 SUPPRESSOR 1", "protein_names_refseq": "dgd1 suppressor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G12290)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11910074;14593172;18208519;20181751;23572148;26187819;27862469;31118221", "class_list": "", "function": "Involved in galactoglycerolipid biosynthesis (PubMed:18208519). Contributes to an intracellular signal that regulates an alternative DGD1-independent galactoglycerolipid biosynthesis pathway in chloroplasts (PubMed:18208519, PubMed:20181751). Being involved in mitochondrial lipid homeostasis, modulates mitochondrion biogenesis and physiology, as well as stress responses (PubMed:31118221)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8GWL0;Q94CL3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0032991 protein-containing complex;GO:0009507 chloroplast;GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0050665 hydrogen peroxide biosynthetic process;GO:0007005 mitochondrion organization;GO:0009414 response to water deprivation;GO:0019375 galactolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GUK1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPR8-1", "uniprot_id": [ { "id": "TI100_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPR8", "type": "external" } ], "mass": 99954.0, "length": 871, "protein_name": "Protein TIC 100", "gene_name": "EMB1211; TIC100", "organism": "Arabidopsis", "refseq_name": "MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein", "refseq_ac": [ { "id": "NP_197656", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197656", "type": "external" } ], "gene_names_uniprotkb": "EMB1211; TIC100; EMB1211; MDJ22.6; MDJ22_6; TIC100; emb1211; embryo defective 1211", "gene_names_refseq": "MDJ22.6; MDJ22_6; TIC100; TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 100; emb1211; embryo defective 1211", "protein_names_uniprotkb": "Protein TIC 100; AtTIC100; Protein EMBRYO DEFECTIVE 1211; Translocon at the inner envelope membrane of chloroplasts 100", "protein_names_refseq": "MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G22640)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;15266054;19376835;20738804;23372012;27862469;9405937", "class_list": "", "function": "Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope (PubMed:23372012). Plays an important role during embryogenesis and chloroplast biogenesis (PubMed:20738804)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FNJ7", "ec_number_list": [], "go_molecular_function": "GO:0008320 protein transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0009658 chloroplast organization;GO:0009793 embryo development ending in seed dormancy;GO:0045037 protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LPR8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WW3-1", "uniprot_id": [ { "id": "VIP2L_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WW3", "type": "external" } ], "mass": 118783.0, "length": 1049, "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2", "gene_name": "ATVIP2; VIP2", "organism": "Arabidopsis", "refseq_name": "Phosphoglycerate mutase-like family protein", "refseq_ac": [ { "id": "NP_001190313", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190313", "type": "external" } ], "gene_names_uniprotkb": "ATVIP2; VIP2; F2G14.190; F2G14_190; VIH1", "gene_names_refseq": "F2G14.190; F2G14_190", "protein_names_uniprotkb": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2; 2.7.4.24; Arabidopsis homolog protein of yeast VIP1 2; AtVIP2; Protein VIP HOMOLOG 1; VIP1 homolog protein 2", "protein_names_refseq": "Phosphoglycerate mutase-like family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15070)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130714;14593172;18463617;20466843;22631563;23111157;23328941;23572148;23660473;23776212;24043427;24601666;25231822;25561503;25901085;26091701;26187819;27862469;29167316;30833711", "class_list": "", "function": "Bifunctional inositol kinase that acts in concert with the IP6K kinases to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, may regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, and exocytosis. Phosphorylates inositol hexakisphosphate (InsP6)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4K8B7;Q93YV1;Q9LFP8", "ec_number_list": [ { "id": "2.7.4.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.24", "type": "external" } ], "go_molecular_function": "GO:0000828 inositol hexakisphosphate kinase activity;GO:0000829 diphosphoinositol pentakisphosphate kinase activity;GO:0052723 inositol hexakisphosphate 1-kinase activity;GO:0033857 5-diphosphoinositol pentakisphosphate 1-kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009536 plastid", "go_biological_process": "GO:0006020 inositol metabolic process;GO:0032958 inositol phosphate biosynthetic process;GO:1904966 positive regulation of vitamin E biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q84WW3-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S3N1-1", "uniprot_id": [ { "id": "SINA5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S3N1", "type": "external" } ], "mass": 35037.0, "length": 309, "protein_name": "E3 ubiquitin-protein ligase SINAT5", "gene_name": "SINAT5", "organism": "Arabidopsis", "refseq_name": "TRAF-like superfamily protein", "refseq_ac": [ { "id": "NP_001330825", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001330825", "type": "external" } ], "gene_names_uniprotkb": "SINAT5; K19E1.16; K19E1_16", "gene_names_refseq": "K19E1.16; K19E1_16", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase SINAT5; 2.3.2.27; RING-type E3 ubiquitin transferase SINAT5; Seven in absentia homolog 5", "protein_names_refseq": "TRAF-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G53360)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;11910074;12226665;14593172;22122664;24350984;27862469;28351989;32786047;9734815", "class_list": "", "function": "E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:12226665). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:12226665). Mediates the ubiquitination and proteasomal-dependent degradation of NAC021/NAC022, a transcription activator that functions downstream of the auxin signals, thereby acting as a down-regulator of auxin signals (PubMed:12226665). Involved in the formation of lateral roots (PubMed:12226665). Is antagonist to SINAT1, SINAT2, SINAT3 and SINAT4 by suppressing FREE1 ubiquitination and degradation mediated by SINAT1, SINAT2, SINAT3 and SINAT4, and promoting FREE1 accumulation (PubMed:32786047)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GYS3;Q9FK06", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8S3N1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L493-1", "uniprot_id": [ { "id": "DAAA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L493", "type": "external" } ], "mass": 41065.0, "length": 373, "protein_name": "D-amino-acid transaminase, chloroplastic", "gene_name": "ADCL; DAAT", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ADCL; DAAT; BCAL3; MTI20.10; MTI20_10", "gene_names_refseq": "", "protein_names_uniprotkb": "D-amino-acid transaminase, chloroplastic; 2.6.1.21; 4.1.3.38; Aminodeoxychorismate lyase; AtADCL; Branched-chain-amino-acid aminotransferase-like protein 3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57850)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;15500462;18318836;27862469;9734815", "class_list": "", "function": "Amino acid aminotransferase showing activity for D-Asp and D-Ala as amino donors with 2-oxoglutarate as an amino acceptor. Can also use D-Met, D-Tyr, D-Phe, D-Gln, D-Trp and D-Asn as substrates, but no activity with L-Asp, L-Ala, L-Leu, L-Ile or L-Val. Also catalyzes the reverse reaction where an amino group is transferred from D-Glu to pyruvate or oxaloacetate to produce D-Ala or D-Asp, respectively. Also involved in folate biosynthesis, acting as an aminodeoxychorismate lyase converting 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate (PABA) (PubMed:15500462)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FJM9", "ec_number_list": [ { "id": "4.1.3.38", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.3.38", "type": "external" }, { "id": "2.6.1.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.21", "type": "external" } ], "go_molecular_function": "GO:0008696 4-amino-4-deoxychorismate lyase activity;GO:0047810 D-alanine-2-oxoglutarate aminotransferase activity;GO:0003824 catalytic activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0046654 tetrahydrofolate biosynthetic process;GO:0019752 carboxylic acid metabolic process;GO:0008153 4-aminobenzoate biosynthetic process;GO:0008652 amino acid biosynthetic process;GO:0046394 carboxylic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L493-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGJ5-1", "uniprot_id": [ { "id": "PCO2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGJ5", "type": "external" } ], "mass": 30820.0, "length": 276, "protein_name": "Plant cysteine oxidase 2", "gene_name": "PCO2", "organism": "Arabidopsis", "refseq_name": "2-aminoethanethiol dioxygenase, putative (DUF1637)", "refseq_ac": [ { "id": "NP_198805", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198805", "type": "external" } ], "gene_names_uniprotkb": "PCO2; HUP43; MYH19.8; MYH19_8; plant cysteine oxidase 2", "gene_names_refseq": "MYH19.8; MYH19_8; PCO2; plant cysteine oxidase 2", "protein_names_uniprotkb": "Plant cysteine oxidase 2; 1.13.11.20; AtPCO2; Hypoxia-responsive unknown protein 43", "protein_names_refseq": "2-aminoethanethiol dioxygenase, putative (DUF1637)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G39890)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;20097791;24599061;27862469;29848548;33207269;9628582", "class_list": "", "function": "Catalyzes the oxidation of N-terminal cysteine residues (N-Cys), thus preparing the protein for N-end rule pathway-mediated proteasomal degradation, upstream of the N-end rule enzymes ATE1, ATE2 and PRT6 (PubMed:24599061, PubMed:29848548, PubMed:33207269). Controls the preparation of the group VII ethylene response factor (ERF-VII) proteins for degradation via the 26S proteasome N-end rule pathway (PubMed:24599061, PubMed:29848548, PubMed:33207269). Acts as an oxygen sensor that controls the stability of ERF-VII proteins, which are stabilized in flooding-induced hypoxia, and regulate transcriptional adaptation to these adverse conditions (Probable) (PubMed:29848548). Not active on Cys located inside or at the C-terminus of a peptide (PubMed:24599061). Acts redundantly with PCO1 to repress the anaerobic response (PubMed:24599061)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FLE5", "ec_number_list": [ { "id": "1.13.11.20", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.20", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0017172 cysteine dioxygenase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0018171 peptidyl-cysteine oxidation;GO:0001666 response to hypoxia;GO:0071456 cellular response to hypoxia;GO:0070483 detection of hypoxia", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LGJ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZA5-1", "uniprot_id": [ { "id": "KDTA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZA5", "type": "external" } ], "mass": 49888.0, "length": 447, "protein_name": "Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial", "gene_name": "KDTA", "organism": "Arabidopsis", "refseq_name": "KDO transferase A", "refseq_ac": [ { "id": "NP_195997", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195997", "type": "external" } ], "gene_names_uniprotkb": "KDTA; AtKdtA; F17C15.190; F17C15_190; KDO transferase A; MED24.5", "gene_names_refseq": "AtKdtA; F17C15.190; F17C15_190; KDO transferase A; KDTA", "protein_names_uniprotkb": "Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial; 2.4.99.12; 2.4.99.13; AtKdtA; Bifunctional Kdo transferase; Kdo transferase A; Kdo-lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase; Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase", "protein_names_refseq": "KDO transferase A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03770)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;20124190;21709257;27862469;9330910", "class_list": "glycogene;glycosyltransferase", "function": "Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Catalyzes the transfer of two 3-deoxy-D-manno-octulosonate (Kdo) residues from CMP-Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FFN3;Q9LZR2", "ec_number_list": [ { "id": "2.4.99.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.99.12", "type": "external" }, { "id": "2.4.99.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.99.13", "type": "external" } ], "go_molecular_function": "GO:0016740 transferase activity;GO:0043842 Kdo transferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016020 membrane", "go_biological_process": "GO:0009245 lipid A biosynthetic process;GO:0036104 Kdo2-lipid A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VZA5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S4F6-1", "uniprot_id": [ { "id": "SQD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S4F6", "type": "external" } ], "mass": 56630.0, "length": 510, "protein_name": "Sulfoquinovosyl transferase SQD2", "gene_name": "SQD2", "organism": "Arabidopsis", "refseq_name": "sulfoquinovosyldiacylglycerol 2", "refseq_ac": [ { "id": "NP_568085", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568085", "type": "external" } ], "gene_names_uniprotkb": "SQD2; F7J8.200; F7J8_200; SULFOLIPID SYNTHASE", "gene_names_refseq": "F7J8.200; F7J8_200; SQD2; SULFOLIPID SYNTHASE; sulfoquinovosyldiacylglycerol 2", "protein_names_uniprotkb": "Sulfoquinovosyl transferase SQD2; 2.4.1.-; Protein SULFOQUINOVOSYLDIACYLGLYCEROL 2; Sulfolipid synthase SQD2; UDP-sulfoquinovose: diacylglycerol alpha-sulfoquinovosyltransferase SQD2", "protein_names_refseq": "sulfoquinovosyldiacylglycerol 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01220)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11960029;14593172;19376835;21506606;21768351;24905498;25697796;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Catalyzes the transfer of the sulfoquinovose moiety from UDP-sulfoquinovose to diacylglycerol during sulfolipid biosynthesis (PubMed:11960029). Sulfolipid contributes to maintaining a negatively charged lipid-water interface, a requirement for proper function of photosynthetic membranes (PubMed:11960029). Sulfolipid may also function as a substitute of anionic phospholipids under phosphate-limited growth conditions (PubMed:11960029)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q941K9;Q9LFB4", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0008194 UDP-glycosyltransferase activity;GO:0046510 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0009247 glycolipid biosynthetic process;GO:0016036 cellular response to phosphate starvation;GO:0046506 sulfolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8S4F6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7C8-1", "uniprot_id": [ { "id": "RWA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7C8", "type": "external" } ], "mass": 63336.0, "length": 540, "protein_name": "Protein REDUCED WALL ACETYLATION 1", "gene_name": "RWA1", "organism": "Arabidopsis", "refseq_name": "O-acetyltransferase family protein", "refseq_ac": [ { "id": "NP_568662", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568662", "type": "external" } ], "gene_names_uniprotkb": "RWA1; MPL12.14; MPL12_14; REDUCED WALL ACETYLATION 1", "gene_names_refseq": "MPL12.14; MPL12_14; REDUCED WALL ACETYLATION 1; RWA1", "protein_names_uniprotkb": "Protein REDUCED WALL ACETYLATION 1; 2.3.1.-", "protein_names_refseq": "O-acetyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46340)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;20466843;21212300;21673009;24019426;27862469;9679202", "class_list": "", "function": "Probable O-acetyltransferase involved in the acetylation of xylan during secondary wall biosynthesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 2, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q944Q8;Q9FL27", "ec_number_list": [], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0016407 acetyltransferase activity;GO:0016740 transferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0009834 plant-type secondary cell wall biogenesis;GO:0010411 xyloglucan metabolic process;GO:0045491 xylan metabolic process;GO:0045492 xylan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L7C8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LET2-1", "uniprot_id": [ { "id": "NUD11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LET2", "type": "external" } ], "mass": 25679.0, "length": 222, "protein_name": "Nudix hydrolase 11", "gene_name": "NUDT11", "organism": "Arabidopsis", "refseq_name": "nudix hydrolase homolog 11", "refseq_ac": [ { "id": "NP_001119380", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119380", "type": "external" } ], "gene_names_uniprotkb": "NUDT11; AtNUDT11; AtNUDX11; K15I22.14; K15I22_14; NUDX11; atnudt11; nudix hydrolase homolog 11", "gene_names_refseq": "Arabidopsis thaliana nudix hydrolase homolog 11; AtNUDT11; AtNUDX11; K15I22.14; K15I22_14; NUDT11; NUDX11; atnudt11; nudix hydrolase homolog 11", "protein_names_uniprotkb": "Nudix hydrolase 11; 3.6.1.-; AtNUDT11; Coenzyme A diphosphatase NUDT11", "protein_names_refseq": "nudix hydrolase homolog 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45940)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10048488;11130714;15878881;18815383;27862469", "class_list": "", "function": "Coenzyme A diphosphatase which mediates the cleavage of CoA into 3',5'-ADP from CoA and 4'-phosphopantetheine. Can use malonyl-CoA, hexanoyl-CoA, lauroyl-CoA, myristoyl-CoA and palmitoyl-CoA as substrates, but not isobutyryl-CoA or propionyl-CoA., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H699;Q9FJ42", "ec_number_list": [], "go_molecular_function": "GO:0000210 NAD+ diphosphatase activity;GO:0046872 metal ion binding;GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity;GO:0010945 coenzyme A diphosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005778 peroxisomal membrane;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0005737 cytoplasm", "go_biological_process": "GO:0015937 coenzyme A biosynthetic process;GO:2001294 malonyl-CoA catabolic process;GO:0015938 coenzyme A catabolic process;GO:0006753 nucleoside phosphate metabolic process;GO:0006637 acyl-CoA metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8LET2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S9J1-1", "uniprot_id": [ { "id": "PPOCM_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S9J1", "type": "external" } ], "mass": 55630.0, "length": 508, "protein_name": "Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial", "gene_name": "HEMG2; PPOX2", "organism": "Arabidopsis", "refseq_name": "Flavin containing amine oxidoreductase family", "refseq_ac": [ { "id": "NP_001190307", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190307", "type": "external" } ], "gene_names_uniprotkb": "HEMG2; PPOX2; F18O22.10; F18O22_10; HEMG2; MEE61; MUA22.22; PPO2", "gene_names_refseq": "F18O22.10; F18O22_10; HEMG2; MATERNAL EFFECT EMBRYO ARREST 61; MEE61; PPO2", "protein_names_uniprotkb": "Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial; 1.3.3.4; PPO2; Protein MATERNAL EFFECT EMBRYO ARREST 61", "protein_names_refseq": "Flavin containing amine oxidoreductase family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G14220)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;14593172;15634699;18431481;21841088;22223895;25561503;27862469;9501997", "class_list": "", "function": "Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K5H8;Q9FMS9;Q9LYA7", "ec_number_list": [ { "id": "1.3.3.4", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.3.4", "type": "external" } ], "go_molecular_function": "GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006779 porphyrin-containing compound biosynthetic process;GO:0006782 protoporphyrinogen IX biosynthetic process;GO:0009793 embryo development ending in seed dormancy;GO:0015995 chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8S9J1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JF0-1", "uniprot_id": [ { "id": "APK4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JF0", "type": "external" } ], "mass": 34065.0, "length": 310, "protein_name": "Adenylyl-sulfate kinase 4, chloroplastic", "gene_name": "APK4", "organism": "Arabidopsis", "refseq_name": "adenosine-5'-phosphosulfate (APS) kinase 4", "refseq_ac": [ { "id": "NP_569050", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_569050", "type": "external" } ], "gene_names_uniprotkb": "APK4; K9I9.8; K9I9_8", "gene_names_refseq": "APK4; K9I9.8; K9I9_8; adenosine-5'-phosphosulfate (APS) kinase 4", "protein_names_uniprotkb": "Adenylyl-sulfate kinase 4, chloroplastic; 2.7.1.25; APS kinase 4; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase 4; Adenosine-5'-phosphosulfate kinase 4", "protein_names_refseq": "adenosine-5'-phosphosulfate (APS) kinase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G67520)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;19304933;19903478;27862469;9734815", "class_list": "", "function": "Catalyzes the phosphorylation of adenosine 5'-phosphosulfate to 3'-phosphoadenylyl sulfate, which is the activated sulfate form for sulfation reactions. Essential for plant reproduction and viability., [UniProtKB, PubMed, PubMed]; Catalyzes the synthesis of activated sulfate., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LF64;Q9FJX1", "ec_number_list": [ { "id": "2.7.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004020 adenylylsulfate kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0019344 cysteine biosynthetic process;GO:0070814 hydrogen sulfide biosynthetic process;GO:0000103 sulfate assimilation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84JF0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWD9-1", "uniprot_id": [ { "id": "ACBP5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWD9", "type": "external" } ], "mass": 71009.0, "length": 648, "protein_name": "Acyl-CoA-binding domain-containing protein 5", "gene_name": "ACBP5", "organism": "Arabidopsis", "refseq_name": "acyl-CoA binding protein 5", "refseq_ac": [ { "id": "NP_198115", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198115", "type": "external" } ], "gene_names_uniprotkb": "ACBP5; AtACBP5; F15A18.90; F15A18_90; acyl-CoA binding protein 5", "gene_names_refseq": "ACBP5; AtACBP5; F15A18.90; F15A18_90; acyl-CoA binding protein 5", "protein_names_uniprotkb": "Acyl-CoA-binding domain-containing protein 5; Acyl-CoA binding protein 5", "protein_names_refseq": "acyl-CoA binding protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G27630)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130714;14593172;15604682;18463617;18773301;19121948;19376835;20466843;22631563;23111157;23660473;25561503;27862469;28011693;30833711", "class_list": "", "function": "Binds medium- and long-chain acyl-CoA esters with very high affinity. Can interact in vitro with oleoyl-CoA, barely with palmitoyl-CoA, but not with arachidonyl-CoA. May function as an intracellular carrier of acyl-CoA esters (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000062 fatty-acyl-CoA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006869 lipid transport;GO:0001666 response to hypoxia;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8RWD9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GY31-1", "uniprot_id": [ { "id": "CDC25_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GY31", "type": "external" } ], "mass": 16450.0, "length": 146, "protein_name": "Dual specificity phosphatase Cdc25", "gene_name": "CDC25", "organism": "Arabidopsis", "refseq_name": "Rhodanese/Cell cycle control phosphatase superfamily protein", "refseq_ac": [ { "id": "NP_568119", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568119", "type": "external" } ], "gene_names_uniprotkb": "CDC25; ACR2; ARATH:CDC25; ARSENATE REDUCTASE 2; ARSENATE REDUCTASE; ASR; AtACR2; F12E4_220; STR5", "gene_names_refseq": "ACR2; ARATH; ARSENATE REDUCTASE 2; ARSENATE REDUCTASE; AtACR2; CDC25", "protein_names_uniprotkb": "Dual specificity phosphatase Cdc25; 1.20.4.1; 3.1.3.48; Arath; Arsenate reductase 2; Arsenate reductase; AtASR; AtStr5; CDC25; Sulfurtransferase 5", "protein_names_refseq": "Rhodanese/Cell cycle control phosphatase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03455)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130714;11910074;14593172;15329414;15336525;15720653;16507083;16567632;16766666;17408957;20647223;22562211;22879969;25099865;25464340;27862469", "class_list": "", "function": "Arsenate reductase that plays a major role in the reduction of arsenate to arsenite and arsenic retention in roots (PubMed:16567632). Has an in vitro and in vivo arsenate reductase activity (PubMed:16507083, PubMed:16766666, PubMed:22562211). Plays no role in arsenic metabolism (PubMed:22879969, PubMed:25464340)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]; Tyrosine protein phosphatase that dephosphorylates CDK complex and activate its kinase activity in vitro., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LC90;Q9LZE1", "ec_number_list": [ { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "1.20.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.1", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" } ], "go_molecular_function": "GO:0008794 arsenate reductase (glutaredoxin) activity;GO:0046872 metal ion binding;GO:0004725 protein tyrosine phosphatase activity;GO:0003824 catalytic activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0046685 response to arsenic-containing substance;GO:0006468 protein phosphorylation;GO:0051301 cell division", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8GY31-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VX3-1", "uniprot_id": [ { "id": "ALF4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VX3", "type": "external" } ], "mass": 69189.0, "length": 626, "protein_name": "Aberrant root formation protein 4", "gene_name": "ALF4", "organism": "Arabidopsis", "refseq_name": "aberrant root formation protein", "refseq_ac": [ { "id": "NP_001154704", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154704", "type": "external" } ], "gene_names_uniprotkb": "ALF4; T5K6.20; T5K6_20", "gene_names_refseq": "ABERRANT LATERAL ROOT FORMATION 4; ALF4; T5K6.20; T5K6_20", "protein_names_uniprotkb": "Aberrant root formation protein 4", "protein_names_refseq": "aberrant root formation protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11030)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;14731255;27862469", "class_list": "", "function": "Required for the initiation of lateral roots independent from auxin signaling. May function in maintaining the pericycle in the mitotically competent state needed for lateral root formation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JWD7;F4JWD8;Q0WTQ0;Q9FY62", "ec_number_list": [], "go_molecular_function": "GO:0055105 ubiquitin-protein transferase inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:1990110 callus formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q84VX3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LB02-1", "uniprot_id": [ { "id": "SDHB2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LB02", "type": "external" } ], "mass": 31141.0, "length": 280, "protein_name": "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial", "gene_name": "SDH2-2", "organism": "Arabidopsis", "refseq_name": "succinate dehydrogenase 2-2", "refseq_ac": [ { "id": "NP_198881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198881", "type": "external" } ], "gene_names_uniprotkb": "SDH2-2; MNF13.170; MNF13.21; MNF13_170; succinate dehydrogenase 2-2", "gene_names_refseq": "MNF13.170; MNF13_170; SDH2-2; succinate dehydrogenase 2-2", "protein_names_uniprotkb": "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial; 1.3.5.1; Ip; Iron-sulfur subunit of complex II", "protein_names_refseq": "succinate dehydrogenase 2-2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40650)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11442063;12970493;14593172;14671022;15563621;15604729;27862469;9628582", "class_list": "", "function": "Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FM32;Q9G3L9", "ec_number_list": [ { "id": "1.3.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.5.1", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0009055 electron transfer activity;GO:0051538 3 iron, 4 sulfur cluster binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0045273 respiratory chain complex II (succinate dehydrogenase);GO:0009536 plastid", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0022904 respiratory electron transport chain;GO:0009060 aerobic respiration;GO:0006121 mitochondrial electron transport, succinate to ubiquinone", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LB02-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDS4-1", "uniprot_id": [ { "id": "NAKR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDS4", "type": "external" } ], "mass": 34509.0, "length": 319, "protein_name": "Protein SODIUM POTASSIUM ROOT DEFECTIVE 1", "gene_name": "NAKR1", "organism": "Arabidopsis", "refseq_name": "Heavy metal transport/detoxification superfamily protein", "refseq_ac": [ { "id": "NP_568105", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568105", "type": "external" } ], "gene_names_uniprotkb": "NAKR1; HPP02; NPCC6; T22P11.190; T22P11_190", "gene_names_refseq": "NAKR1; NPCC6; SODIUM POTASSIUM ROOT DEFECTIVE 1; T22P11.190; T22P11_190; nuclear-enriched phloem companion cell gene 6", "protein_names_uniprotkb": "Protein SODIUM POTASSIUM ROOT DEFECTIVE 1; AtHPP02; Heavy metal-associated plant protein 2; NPCC6; NaKR1; Nuclear-enriched phloem companion cell gene 6", "protein_names_refseq": "Heavy metal transport/detoxification superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02600)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;11910074;14593172;18354040;21193571;23368984;26187819;27255839;27862469;28011693", "class_list": "", "function": "Required for root meristem maintenance after germination (PubMed:21193571). Involved in phloem translocation, starch accumulation and flowering (PubMed:21193571). Promotes flowering in the photoperiod pathway (PubMed:27255839). Regulates long-distance movement of FT from leaves to the shoot apex through the phloem stream (PubMed:27255839)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ42", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0009507 chloroplast", "go_biological_process": "GO:0055078 sodium ion homeostasis;GO:0009908 flower development;GO:0010015 root morphogenesis;GO:0010233 phloem transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8LDS4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H2D5-1", "uniprot_id": [ { "id": "POLH_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H2D5", "type": "external" } ], "mass": 73985.0, "length": 672, "protein_name": "DNA polymerase eta", "gene_name": "POLH", "organism": "Arabidopsis", "refseq_name": "Y-family DNA polymerase H", "refseq_ac": [ { "id": "NP_568638", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568638", "type": "external" } ], "gene_names_uniprotkb": "POLH; K23L20.8; K23L20_8; RAD30; T19K24.15; Y-family DNA polymerase H", "gene_names_refseq": "K23L20.8; K23L20_8; POLH; Y-family DNA polymerase H", "protein_names_uniprotkb": "DNA polymerase eta; 2.7.7.7; AtPOLH; AtRAD30; Radiation-sensitive protein 30; Y-family DNA polymerase H", "protein_names_refseq": "Y-family DNA polymerase H", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44740)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10048488;11130714;14593172;15645454;16857217;18339443;18366182;18494853;21030509;21455019;22018494;27862469", "class_list": "", "function": "Error-free DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis (TLS), where the normal high fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Plays an important role in the repair of UV-induced pyrimidine dimers and confers resistance to ultraviolet light. Depending on the context, it inserts the correct base, but may cause base transitions and transversions. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity. Targets POLI to replication foci. Exhibits cyclobutane dimer nonmutagenic bypass activity in vitro., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A4ZYA7;A4ZYA8;O48586;Q8H1C5;Q9C5F5", "ec_number_list": [ { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.102", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.102", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "3.4.23.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.23.-", "type": "external" }, { "id": "4.2.99.-", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.-", "type": "external" } ], "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0046872 metal ion binding;GO:0003684 damaged DNA binding;GO:0016740 transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0035861 site of double-strand break;GO:0005657 replication fork", "go_biological_process": "GO:0006281 DNA repair;GO:0009314 response to radiation;GO:0042276 error-prone translesion synthesis;GO:0010224 response to UV-B;GO:0009650 UV protection", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8H2D5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GW43-1", "uniprot_id": [ { "id": "BIOF_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GW43", "type": "external" } ], "mass": 52171.0, "length": 476, "protein_name": "8-amino-7-oxononanoate synthase", "gene_name": "BIOF", "organism": "Arabidopsis", "refseq_name": "biotin F", "refseq_ac": [ { "id": "NP_196082", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196082", "type": "external" } ], "gene_names_uniprotkb": "BIOF; ATBIOF; BIO4; T1E3.3; T32M21.220; biotin 4; biotin F", "gene_names_refseq": "7-KETO-8-AMINOPELARGONIC ACID (KAPA) SYNTHASE; ATBIOF; BIO4; BIOF; T1E3.3; biotin 4; biotin F", "protein_names_uniprotkb": "8-amino-7-oxononanoate synthase; 2.3.1.47; 7-KAP synthase; 7-keto-8-amino-pelargonic acid synthase; 8-amino-7-ketopelargonate synthase; AONS; AtbioF; Biotin synthase 4; Biotin synthase F; KAPA synthase", "protein_names_refseq": "biotin F", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04620)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;11910074;16299174;21730067;22126457;27862469", "class_list": "", "function": "Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide (PubMed:16299174, PubMed:21730067). Required for the biosynthesis of D-biotin that prevents light-mediated cell death and modulates defense gene expression, probably by avoiding hydrogen peroxide H(2)O(2) accumulation (PubMed:22126457)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2QKD2;Q9LZ63", "ec_number_list": [ { "id": "2.3.1.47", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.47", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0008710 8-amino-7-oxononanoate synthase activity;GO:0016740 transferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005829 cytosol", "go_biological_process": "GO:0009102 biotin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GW43-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84MC2-1", "uniprot_id": [ { "id": "LOG8_ARATH", "url": "https://www.uniprot.org/uniprot/Q84MC2", "type": "external" } ], "mass": 23831.0, "length": 216, "protein_name": "Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8", "gene_name": "LOG8", "organism": "Arabidopsis", "refseq_name": "Putative lysine decarboxylase family protein", "refseq_ac": [ { "id": "NP_001332403", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332403", "type": "external" } ], "gene_names_uniprotkb": "LOG8; F14F18.120; F14F18_120; LONELY GUY 8", "gene_names_refseq": "F14F18.120; F14F18_120; LOG8; LONELY GUY 8", "protein_names_uniprotkb": "Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8; 3.2.2.n1; LOG family protein At5g11950; Protein LONELY GUY 8", "protein_names_refseq": "Putative lysine decarboxylase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11950)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;17048257;17287810;19837870;27862469", "class_list": "", "function": "Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WTA9;Q570P8;Q9LYH8", "ec_number_list": [ { "id": "3.2.2.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.n1", "type": "external" } ], "go_molecular_function": "GO:0102682 cytokinin riboside 5'-monophosphate phosphoribohydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0009691 cytokinin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84MC2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84MA8-1", "uniprot_id": [ { "id": "AZG2_ARATH", "url": "https://www.uniprot.org/uniprot/Q84MA8", "type": "external" } ], "mass": 56277.0, "length": 530, "protein_name": "Adenine/guanine permease AZG2", "gene_name": "AZG2", "organism": "Arabidopsis", "refseq_name": "Xanthine/uracil permease family protein", "refseq_ac": [ { "id": "NP_001332453", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332453", "type": "external" } ], "gene_names_uniprotkb": "AZG2; ATAZG2; AZA-GUANINE RESISTANT2; K6A12.16; K6A12_16", "gene_names_refseq": "ARABIDOPSIS THALIANA AZA-GUANINE RESISTANT2; ATAZG2; AZA-GUANINE RESISTANT2; AZG2; K6A12.16; K6A12_16", "protein_names_uniprotkb": "Adenine/guanine permease AZG2; AtAzg2; AzgA-homolog protein; Protein AZAGUANINE RESISTANT 2", "protein_names_refseq": "Xanthine/uracil permease family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50300)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10718197;11130714;14593172;19121308;27862469", "class_list": "", "function": "Transports natural purines (adenine and guanine) as well as purine analogs. Confers sensitivity to 8-azaadenine and 8-azaguanine (8-azg)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGR5", "ec_number_list": [], "go_molecular_function": "GO:0005345 purine nucleobase transmembrane transporter activity;GO:0000295 adenine nucleotide transmembrane transporter activity;GO:0001409 guanine nucleotide transmembrane transporter activity;GO:0015205 nucleobase transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0006863 purine nucleobase transport;GO:1903790 guanine nucleotide transmembrane transport;GO:0015853 adenine transport;GO:0051503 adenine nucleotide transport;GO:0015854 guanine transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84MA8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWS6-1", "uniprot_id": [ { "id": "FRO6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWS6", "type": "external" } ], "mass": 83458.0, "length": 738, "protein_name": "Ferric reduction oxidase 6", "gene_name": "FRO6", "organism": "Arabidopsis", "refseq_name": "ferric reduction oxidase 6", "refseq_ac": [ { "id": "NP_199784", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199784", "type": "external" } ], "gene_names_uniprotkb": "FRO6; ATFRO6; K2I5.9; K2I5_9; ferric reduction oxidase 6", "gene_names_refseq": "ATFRO6; FRO6; K2I5.9; K2I5_9; ferric reduction oxidase 6", "protein_names_uniprotkb": "Ferric reduction oxidase 6; 1.16.1.7; AtFRO6; Ferric-chelate reductase 6", "protein_names_refseq": "ferric reduction oxidase 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49730)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;16006655;16362328;16489134;18647837;21104018;27862469", "class_list": "", "function": "Ferric chelate reductase involved in iron uptake by shoot and leaf cells. May participate in the transport of electrons to a Fe(3+) ion via FAD and heme intermediates., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLX7;Q9LTA0", "ec_number_list": [ { "id": "1.16.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.16.1.7", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000293 ferric-chelate reductase activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009536 plastid;GO:0016020 membrane", "go_biological_process": "GO:0009416 response to light stimulus;GO:0033212 iron import into cell", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8RWS6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWH3-1", "uniprot_id": [ { "id": "YAK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWH3", "type": "external" } ], "mass": 105523.0, "length": 956, "protein_name": "Dual specificity protein kinase YAK1 homolog", "gene_name": "YAK1", "organism": "Arabidopsis", "refseq_name": "YAK1-like protein 1", "refseq_ac": [ { "id": "NP_001031970", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031970", "type": "external" } ], "gene_names_uniprotkb": "YAK1; MEE13.9; MEE13_9; yeast YAK1-related gene 1", "gene_names_refseq": "MEE13.9; MEE13_9; YAK1; yeast YAK1-related gene 1", "protein_names_uniprotkb": "Dual specificity protein kinase YAK1 homolog; 2.7.12.1; AtYAK1; Dual specificity tyrosine-phosphorylation-regulated kinase YAK1", "protein_names_refseq": "YAK1-like protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35980)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "11130714;14593172;18433157;18463617;19376835;20466843;20733066;21768351;22074104;23328941;23572148;23660473;23776212;25561503;26091701;26187819;26452715;27264339;27532006;27862469;29654922;30833711", "class_list": "", "function": "Dual specificity protein kinase that phosphorylates ANN1, ANN2 and CP29B at serine and threonine residues, and ANN1, ANN2 and ANN4 at tyrosine residues. May regulate the phosphorylation status of annexin proteins (PubMed:26452715). Acts as a positive regulator in abscisic acid (ABA)-mediated regulation of postgermination growth and drought response. May regulate the expression of ABA-responsive genes such as RD22, RD29A, LTI65/RD29B and RAB18 (PubMed:27264339)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56YT6;Q9FGC1", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009506 plasmodesma", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0046777 protein autophosphorylation;GO:0009789 positive regulation of abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q8RWH3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWK0-1", "uniprot_id": [ { "id": "PS12B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWK0", "type": "external" } ], "mass": 51118.0, "length": 442, "protein_name": "26S proteasome non-ATPase regulatory subunit 12 homolog B", "gene_name": "RPN5B", "organism": "Arabidopsis", "refseq_name": "regulatory particle non-ATPase subunit 5B", "refseq_ac": [ { "id": "NP_568994", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568994", "type": "external" } ], "gene_names_uniprotkb": "RPN5B; MVP7.9; MVP7_9", "gene_names_refseq": "MVP7.9; MVP7_9; RPN5B; regulatory particle non-ATPase subunit 5B", "protein_names_uniprotkb": "26S proteasome non-ATPase regulatory subunit 12 homolog B; 26S proteasome regulatory subunit RPN5b; 26S proteasome regulatory subunit p55 homolog B; AtRPN5b", "protein_names_refseq": "regulatory particle non-ATPase subunit 5B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64760)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;14623884;19252082;20516081;27862469", "class_list": "", "function": "Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins (By similarity). Acts redundantly with RPN5A., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGF7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000502 proteasome complex;GO:0008541 proteasome regulatory particle, lid subcomplex", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process;GO:0030163 protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VWK0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1D6-1", "uniprot_id": [ { "id": "RBK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1D6", "type": "external" } ], "mass": 52652.0, "length": 467, "protein_name": "Receptor-like cytosolic serine/threonine-protein kinase RBK1", "gene_name": "RBK1", "organism": "Arabidopsis", "refseq_name": "ROP binding protein kinases 1", "refseq_ac": [ { "id": "NP_568231", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568231", "type": "external" } ], "gene_names_uniprotkb": "RBK1; F12B17.130; F12B17_130; ROP binding protein kinases 1", "gene_names_refseq": "F12B17.130; F12B17_130; RBK1; ROP binding protein kinases 1", "protein_names_uniprotkb": "Receptor-like cytosolic serine/threonine-protein kinase RBK1; 2.7.11.1; Protein ROP BINDING PROTEIN KINASES 1", "protein_names_refseq": "ROP binding protein kinases 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10520)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;18088316;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93ZZ8;Q9LXA4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0051020 GTPase binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0012505 endomembrane system", "go_biological_process": "GO:0098542 defense response to other organism;GO:0050832 defense response to fungus;GO:0071369 cellular response to ethylene stimulus", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8H1D6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GY54-1", "uniprot_id": [ { "id": "GCT21_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GY54", "type": "external" } ], "mass": 24573.0, "length": 216, "protein_name": "Gamma-glutamylcyclotransferase 2-1", "gene_name": "1; GGCT2", "organism": "Arabidopsis", "refseq_name": "ChaC-like family protein", "refseq_ac": [ { "id": "NP_197994", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197994", "type": "external" } ], "gene_names_uniprotkb": "1; GGCT2; AtGGCT2:1; GGCT2:1; T19G15.70; T19G15_70", "gene_names_refseq": "1; AtGGCT2; GGCT2; T19G15.70; T19G15_70; gamma-glutamyl cyclotransferase 2", "protein_names_uniprotkb": "Gamma-glutamylcyclotransferase 2-1; 1; 4.3.2.9; AtGGCT2; Gamma-glutamyl cyclotransferase 2", "protein_names_refseq": "ChaC-like family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26220)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;11910074;14593172;15708574;24214398;27862469", "class_list": "", "function": "Catalyzes the formation of 5-oxoproline from gamma-glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis. Converts both GSH and gamma-glutamyl-L-alanine to 5-oxoproline in vitro. Plays a role in detoxification of heavy metals and metalloids by recycling glutamate and maintaining GSH homeostasis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "4.3.2.9", "url": "https://www.rhea-db.org/rhea/?query=ec:4.3.2.9", "type": "external" }, { "id": "4.3.2.7", "url": "https://www.rhea-db.org/rhea/?query=ec:4.3.2.7", "type": "external" } ], "go_molecular_function": "GO:0003839 gamma-glutamylcyclotransferase activity;GO:0061928 glutathione specific gamma-glutamylcyclotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006751 glutathione catabolic process;GO:0010288 response to lead ion;GO:0046686 response to cadmium ion", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GY54-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LED3-1", "uniprot_id": [ { "id": "TBL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LED3", "type": "external" } ], "mass": 49829.0, "length": 434, "protein_name": "Protein trichome birefringence-like 3", "gene_name": "TBL3", "organism": "Arabidopsis", "refseq_name": "trichome birefringence-like protein (DUF828)", "refseq_ac": [ { "id": "NP_568089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568089", "type": "external" } ], "gene_names_uniprotkb": "TBL3; T10O8.70; T10O8_70; TRICHOME BIREFRINGENCE-LIKE 3", "gene_names_refseq": "T10O8.70; T10O8_70; TBL3; TRICHOME BIREFRINGENCE-LIKE 3", "protein_names_uniprotkb": "Protein trichome birefringence-like 3", "protein_names_refseq": "trichome birefringence-like protein (DUF828)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01360)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;17316173;19423640;20388664;20657172;21124849;27862469", "class_list": "", "function": "Involved in secondary cell wall cellulose deposition. Required for normal stem development (PubMed:20388664). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity)., [UniProtKB, UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DH72;F4K9C5;Q0WSF4;Q9M036", "ec_number_list": [], "go_molecular_function": "GO:0016413 O-acetyltransferase activity;GO:1990538 xylan O-acetyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0030244 cellulose biosynthetic process;GO:0009827 plant-type cell wall modification;GO:0045489 pectin biosynthetic process;GO:0045492 xylan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LED3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0X6-1", "uniprot_id": [ { "id": "CYT6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0X6", "type": "external" } ], "mass": 26294.0, "length": 234, "protein_name": "Cysteine proteinase inhibitor 6", "gene_name": "CYS6; CYSB", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CYS6; CYSB; ATCYS6; ATCYSB; MQC3.31; T2E22.19; cystatin B", "gene_names_refseq": "", "protein_names_uniprotkb": "Cysteine proteinase inhibitor 6; AtCYS-6; PIP-M; PRLI-interacting factor M", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G12490)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10907853;11130713;14593172;15887031;22092075;22223895;23572148;27862469;9765207", "class_list": "", "function": "Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZA2;Q9FUB0;Q9LHF9", "ec_number_list": [], "go_molecular_function": "GO:0050897 cobalt ion binding;GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol", "go_biological_process": "GO:0006952 defense response;GO:0006979 response to oxidative stress;GO:0009409 response to cold;GO:0009414 response to water deprivation;GO:0006972 hyperosmotic response", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8H0X6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84LM4-1", "uniprot_id": [ { "id": "AARE_ARATH", "url": "https://www.uniprot.org/uniprot/Q84LM4", "type": "external" } ], "mass": 83938.0, "length": 764, "protein_name": "Acylamino-acid-releasing enzyme", "gene_name": "AARE", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "AARE; AtAARE; DL3325W; FCAALL.258; dl3325w", "gene_names_refseq": "", "protein_names_uniprotkb": "Acylamino-acid-releasing enzyme; 3.4.19.1; AARE; OPH; Oxidized protein hydrolase", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14570)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;12966075;22398639;27862469;9461215", "class_list": "", "function": "Catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus. Can degrade the glycated RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) protein but not the native protein. May be involved in the elimination of glycated proteins (PubMed:12966075). Plays a homeostatic role in sustaining the cytoplasmic antioxidative system. May contribute to the elimination of the oxidized proteins in the cytoplasm (PubMed:22398639)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23313", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0008242 omega peptidase activity;GO:0008238 exopeptidase activity;GO:0070009 serine-type aminopeptidase activity;GO:0008236 serine-type peptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005773 vacuole", "go_biological_process": "GO:0006508 proteolysis;GO:0051289 protein homotetramerization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84LM4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H112-1", "uniprot_id": [ { "id": "PGL1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H112", "type": "external" } ], "mass": 35721.0, "length": 324, "protein_name": "PGR5-like protein 1A, chloroplastic", "gene_name": "PGR5-LIKE; PGRL1A", "organism": "Arabidopsis", "refseq_name": "PGR5-LIKE A", "refseq_ac": [ { "id": "NP_001078431", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078431", "type": "external" } ], "gene_names_uniprotkb": "PGR5-LIKE; PGRL1A; F7H19.70; F7H19_70; PGR5-LIKE A; PGRL1A", "gene_names_refseq": "F7H19.70; F7H19_70; PGR5-LIKE A; PGRL1A", "protein_names_uniprotkb": "PGR5-like protein 1A, chloroplastic; Ferredoxin-plastoquinone reductase 1", "protein_names_refseq": "PGR5-LIKE A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22890)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;18243102;19376835;20392519;23290914;25561503;26091701;27862469", "class_list": "", "function": "Ferredoxin-plastoquinone reductase involved in cyclic electron flow (CEF) around photosystem I. The homodimer is probably not involved in CEF., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MS43;A8MSD4;O82738", "ec_number_list": [], "go_molecular_function": "GO:0019904 protein domain specific binding;GO:0042802 identical protein binding;GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0009773 photosynthetic electron transport in photosystem I", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8H112-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L999-1", "uniprot_id": [ { "id": "BPC6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L999", "type": "external" } ], "mass": 38239.0, "length": 342, "protein_name": "Protein BASIC PENTACYSTEINE6", "gene_name": "BPC6", "organism": "Arabidopsis", "refseq_name": "basic pentacysteine 6", "refseq_ac": [ { "id": "NP_001078690", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078690", "type": "external" } ], "gene_names_uniprotkb": "BPC6; ATBPC6; BPC6; MDH9.22; MDH9_22; basic pentacysteine 6", "gene_names_refseq": "ARABIDOPSIS THALIANA BASIC PENTACYSTEINE 6; ATBPC6; BBR/BPC6; BPC6; MDH9.22; MDH9_22; basic pentacysteine 6", "protein_names_uniprotkb": "Protein BASIC PENTACYSTEINE6; AtBPC6; GAGA-binding transcriptional activator BBR/BPC6", "protein_names_refseq": "basic pentacysteine 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42520)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10048488;11130714;12795701;14731261;21347358;21435046;25561503;27862469", "class_list": "", "function": "Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQZ4;Q9FIG5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L999-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RUW5-1", "uniprot_id": [ { "id": "SCP8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RUW5", "type": "external" } ], "mass": 49439.0, "length": 433, "protein_name": "Serine carboxypeptidase-like 8", "gene_name": "SCPL8; SNG1", "organism": "Arabidopsis", "refseq_name": "sinapoylglucose 1", "refseq_ac": [ { "id": "NP_850034", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850034", "type": "external" } ], "gene_names_uniprotkb": "SCPL8; SNG1; F21P24.5; MALATE SINAPOYLTRANSFERASE; SCPL8; SERINE CARBOXYPEPTIDASE-LIKE 8; SMT; SNG1; T20K9.18; sinapoylglucose 1", "gene_names_refseq": "MALATE SINAPOYLTRANSFERASE; SCPL8; SERINE CARBOXYPEPTIDASE-LIKE 8; SNG1; T20K9.18; sinapoylglucose 1", "protein_names_uniprotkb": "Serine carboxypeptidase-like 8; 2.3.1.103; 2.3.1.92; Protein SINAPOYLGLUCOSE ACCUMULATOR 1; SMT; Sinapoylglucose--malate O-sinapoyltransferase; Sinapoylglucose--sinapoylglucose O-sinapoyltransferase", "protein_names_refseq": "sinapoylglucose 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22990)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;10948250;12012238;14593172;15908604;17094968;17600138;19695650;19969522;27862469", "class_list": "", "function": "Involved in plants secondary metabolism. Functions as acyltransferase to form the sinapate ester sinapoylmalate. Also capable of catalyzing the formation of 1,2-bis-O-sinapoyl beta-D-glucoside., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O64809;Q3EBV9;Q9ASY4", "ec_number_list": [ { "id": "2.3.1.103", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.103", "type": "external" }, { "id": "2.3.1.92", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.92", "type": "external" } ], "go_molecular_function": "GO:0004185 serine-type carboxypeptidase activity;GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups;GO:0016754 sinapoylglucose-malate O-sinapoyltransferase activity;GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity;GO:0016752 sinapoyltransferase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005773 vacuole", "go_biological_process": "GO:0006508 proteolysis;GO:0019748 secondary metabolic process;GO:0009698 phenylpropanoid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8RUW5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H166-1", "uniprot_id": [ { "id": "ALEU_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H166", "type": "external" } ], "mass": 38959.0, "length": 358, "protein_name": "Thiol protease aleurain", "gene_name": "ALEU; ALP", "organism": "Arabidopsis", "refseq_name": "aleurain-like protease", "refseq_ac": [ { "id": "NP_568921", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568921", "type": "external" } ], "gene_names_uniprotkb": "ALEU; ALP; AALP; MUF9.1; MUF9.4; MUF9_4; SAG2; SENESCENCE ASSOCIATED GENE2; aleurain-like protease", "gene_names_refseq": "AALP; ALP; MUF9.4; MUF9_4; SAG2; SENESCENCE ASSOCIATED GENE2; aleurain-like protease", "protein_names_uniprotkb": "Thiol protease aleurain; 3.4.22.16; AtALEU; Senescence-associated gene product 2", "protein_names_refseq": "aleurain-like protease", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60360)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10871276;11130714;12730271;14593172;14617064;27862469;8518555;9225474;9617813;9679202", "class_list": "", "function": "May play a role in proteolysis leading to mobilization of nitrogen during senescence and starvation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9LL83;Q9S9A9", "ec_number_list": [], "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity;GO:0008234 cysteine-type peptidase activity;GO:0008656 cysteine-type endopeptidase activator activity involved in apoptotic process;GO:0050547 feruloyl-CoA hydratase/lyase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005615 extracellular space;GO:0005764 lysosome;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0006955 immune response;GO:2001235 positive regulation of apoptotic signaling pathway;GO:0051603 proteolysis involved in protein catabolic process;GO:0009699 phenylpropanoid biosynthetic process;GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8H166-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84L30-1", "uniprot_id": [ { "id": "RD23D_ARATH", "url": "https://www.uniprot.org/uniprot/Q84L30", "type": "external" } ], "mass": 40066.0, "length": 378, "protein_name": "Ubiquitin receptor RAD23d", "gene_name": "RAD23D", "organism": "Arabidopsis", "refseq_name": "Rad23 UV excision repair protein family", "refseq_ac": [ { "id": "NP_198663", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198663", "type": "external" } ], "gene_names_uniprotkb": "RAD23D; MXI10.20; MXI10_20; RAD23-4; RAD23; RADIATION SENSITIVE23D", "gene_names_refseq": "MXI10.20; MXI10_20; RAD23D; RADIATION SENSITIVE23D", "protein_names_uniprotkb": "Ubiquitin receptor RAD23d; AtRAD23-4; AtRAD23d; Putative DNA repair protein RAD23-4; RAD23-like protein 4", "protein_names_refseq": "Rad23 UV excision repair protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G38470)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130714;14593172;19376835;20059542;20086187;20399133;21764993;23111157;23328941;23572148;25561503;26091701;27862469;9330910", "class_list": "", "function": "May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q94C35;Q9FF16", "ec_number_list": [], "go_molecular_function": "GO:0031593 polyubiquitin modification-dependent protein binding;GO:0003684 damaged DNA binding;GO:0043130 ubiquitin binding;GO:0070628 proteasome binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0009409 response to cold;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0006289 nucleotide-excision repair", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q84L30-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LE06-1", "uniprot_id": [ { "id": "SOP13_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LE06", "type": "external" } ], "mass": 7573.0, "length": 68, "protein_name": "Serine rich endogenous peptide 13", "gene_name": "PROSCOOP13", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_564183", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564183", "type": "external" } ], "gene_names_uniprotkb": "PROSCOOP13; F19G10; SCOOP13; STMP1", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine rich endogenous peptide 13; AtSCOOP13; Phytocytokine SCOOP13; Precursor of serine rich endogenous peptide phytocytokine 13; Secreted transmembrane peptide 1", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22885)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;27862469;30715439;31001913;33514716;34535661", "class_list": "", "function": "Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:31001913, PubMed:33514716, PubMed:34535661). Promotes the expression of immune-related marker genes (e.g. WRKY30, WRKY33 and CYP81F2) in a MIK2-dependent manner (PubMed:34535661). Inhibits root growth and regulates root meristems (PubMed:31001913, PubMed:34535661). Prevents general growth and development (PubMed:31001913). Exhibits antibacterial effects against Pseudomonas syringae pv. tomato DC3000, Ralstonia solanacearum, Bacillus subtilis and Agrobacterium tumefaciens, thus being an antimicrobial peptide (AMP) (PubMed:31001913)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding;GO:0030275 LRR domain binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:0009409 response to cold;GO:0009617 response to bacterium;GO:0009651 response to salt stress;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LE06-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZ79-1", "uniprot_id": [ { "id": "TI201_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZ79", "type": "external" } ], "mass": 31204.0, "length": 274, "protein_name": "Protein TIC 20-I, chloroplastic", "gene_name": "TIC20-I", "organism": "Arabidopsis", "refseq_name": "translocon at the inner envelope membrane of chloroplasts 20", "refseq_ac": [ { "id": "NP_171986", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171986", "type": "external" } ], "gene_names_uniprotkb": "TIC20-I; F13M7.5; F13M7.7; F13M7_5", "gene_names_refseq": "AtTic20-I; F13M7.7; F13M7_7; TIC20; Tic20-I; atTIC20; translocon at the inner envelope membrane of chloroplasts 20-I; translocon at the inner envelope membrane of chloroplasts 20", "protein_names_uniprotkb": "Protein TIC 20-I, chloroplastic; AtTIC20-I; Translocon at the inner envelope membrane of chloroplasts 20-I", "protein_names_refseq": "translocon at the inner envelope membrane of chloroplasts 20", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04940); (ath:AT1G04960)", "pathway_count": 2, "publication_count": 11, "publication_id_list": "11130712;11910011;14593172;15033972;16891400;19531596;20100520;21266460;21395885;23372012;27862469", "class_list": "", "function": "Involved in protein precursor import into chloroplasts. May be part of an intermediate translocation complex acting as a protein-conducting channel at the inner envelope. Seems to be specific for photosynthesis-related pre-proteins. Partially redundant with TIC20-IV, but not with TIC20-II or TIC20-V., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9MAU2", "ec_number_list": [], "go_molecular_function": "GO:0008320 protein transmembrane transporter activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0045037 protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8GZ79-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXU6-1", "uniprot_id": [ { "id": "PCN_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXU6", "type": "external" } ], "mass": 90270.0, "length": 815, "protein_name": "WD repeat-containing protein PCN", "gene_name": "PCN", "organism": "Arabidopsis", "refseq_name": "Transducin family protein / WD-40 repeat family protein", "refseq_ac": [ { "id": "NP_567317", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567317", "type": "external" } ], "gene_names_uniprotkb": "PCN; F28D6.14; F28D6_14; POPCORN", "gene_names_refseq": "F28D6.14; F28D6_14; PCN; POPCORN", "protein_names_uniprotkb": "WD repeat-containing protein PCN; Protein POPCORN", "protein_names_refseq": "Transducin family protein / WD-40 repeat family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G07410)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;22158464;23572148;23660473;23776212;27862469", "class_list": "", "function": "Involved in auxin signaling pathway. Required for embryo development and meristem organization. Functions in the auxin pathway, integrating auxin signaling in the organization and maintenance of the shoot apical meristem (SAM) and root apical meristem (RAM)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9S9X3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009793 embryo development ending in seed dormancy;GO:0010073 meristem maintenance;GO:0010305 leaf vascular tissue pattern formation;GO:0010311 lateral root formation;GO:0010449 root meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RXU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYR7-1", "uniprot_id": [ { "id": "BOR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYR7", "type": "external" } ], "mass": 78605.0, "length": 704, "protein_name": "Boron transporter 1", "gene_name": "BOR1", "organism": "Arabidopsis", "refseq_name": "HCO3- transporter family", "refseq_ac": [ { "id": "NP_850469", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850469", "type": "external" } ], "gene_names_uniprotkb": "BOR1; AtBOR1; REQUIRES HIGH BORON 1; T3D7.3", "gene_names_refseq": "AtBOR1; BOR1; REQUIRES HIGH BORON 1; T3D7.3", "protein_names_uniprotkb": "Boron transporter 1", "protein_names_refseq": "HCO3- transporter family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47160)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617197;12447444;14593172;16103374;16805739;20194745;21768351;25561503;27449211;27862469;29654922;9390427", "class_list": "", "function": "Efflux-type boron (B) transporter for xylem loading, responsive of boron translocation from roots to shoots under boron limitation (PubMed:12447444, PubMed:16805739, PubMed:27449211, PubMed:9390427). Boron is essential for maintaining the integrity of plants cell walls (PubMed:16805739, PubMed:9390427)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHX0", "ec_number_list": [], "go_molecular_function": "GO:0005452 solute:inorganic anion antiporter activity;GO:0046715 active borate transmembrane transporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005886 plasma membrane;GO:0010008 endosome membrane;GO:0005774 vacuolar membrane", "go_biological_process": "GO:0035445 borate transmembrane transport;GO:0055085 transmembrane transport;GO:0006820 monoatomic anion transport;GO:0050801 monoatomic ion homeostasis;GO:0046713 borate transport", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8VYR7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LEM4-1", "uniprot_id": [ { "id": "ATG8A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LEM4", "type": "external" } ], "mass": 13695.0, "length": 122, "protein_name": "Autophagy-related protein 8a", "gene_name": "APG8A; ATG8A", "organism": "Arabidopsis", "refseq_name": "Ubiquitin-like superfamily protein", "refseq_ac": [ { "id": "NP_567642", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567642", "type": "external" } ], "gene_names_uniprotkb": "APG8A; ATG8A; APG8A; ATG8A; AUTOPHAGY 8A; AUTOPHAGY-RELATED 8A; F1N20.80; F1N20_80", "gene_names_refseq": "APG8A; ATG8A; AUTOPHAGY 8A; AUTOPHAGY-RELATED 8A; F1N20.80; F1N20_80", "protein_names_uniprotkb": "Autophagy-related protein 8a; AtAPG8a; Autophagy-related ubiquitin-like modifier ATG8a; Protein autophagy 8a", "protein_names_refseq": "Ubiquitin-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21980)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;12070171;12114572;14593172;15178341;15494556;16157655;21606687;27862469", "class_list": "", "function": "Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65447;Q8S928", "ec_number_list": [], "go_molecular_function": "GO:0008429 phosphatidylethanolamine binding;GO:0019776 Atg8-family ligase activity;GO:0019779 Atg8 activating enzyme activity;GO:0019786 protein-phosphatidylethanolamide deconjugating activity", "go_cellular_component": "GO:0000421 autophagosome membrane;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0031410 cytoplasmic vesicle;GO:0005776 autophagosome", "go_biological_process": "GO:0097352 autophagosome maturation;GO:0000045 autophagosome assembly;GO:0015031 protein transport;GO:0006914 autophagy;GO:0000423 mitophagy", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LEM4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPG9-1", "uniprot_id": [ { "id": "IQD14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPG9", "type": "external" } ], "mass": 74282.0, "length": 668, "protein_name": "Protein IQ-DOMAIN 14", "gene_name": "IQD14", "organism": "Arabidopsis", "refseq_name": "IQ-domain 14", "refseq_ac": [ { "id": "NP_001154574", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154574", "type": "external" } ], "gene_names_uniprotkb": "IQD14; F18O19.21; IQ-domain 14", "gene_names_refseq": "F18O19.21; IQ-domain 14; IQD14", "protein_names_uniprotkb": "Protein IQ-DOMAIN 14; AtIQD14", "protein_names_refseq": "IQ-domain 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43680)", "pathway_count": 1, "publication_count": 32, "publication_id_list": "10617197;14593172;16368012;17317660;17651370;18463617;19253305;19376835;20374526;20466843;21768351;23111157;23172892;23328941;23572148;23660473;23776212;24043427;24601666;25561503;26091701;26187819;27419465;27532006;27862469;28011693;28115582;28534650;28803875;29167316;29654922;30833711", "class_list": "", "function": "May be involved in cooperative interactions with calmodulins or calmodulin-like proteins (By similarity). Recruits calmodulin proteins to microtubules, thus being a potential scaffold in cellular signaling and trafficking (PubMed:28115582). Regulates cell and organ shapes (prevents twisting) in aerial parts probably by regulating transverse microtubules (MT) arrays alignment (PubMed:28115582). Regulates the formation of oval xylem secondary cell-wall deposition pits through microtubule-dependent lateral inhibition of Rho GTPase domains, thus confining the area of active ROP domains within the lattice of the cortical microtubules (PubMed:28803875). May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 65, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22835", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005856 cytoskeleton;GO:0005886 plasma membrane", "go_biological_process": "GO:0009834 plant-type secondary cell wall biogenesis;GO:0010089 xylem development;GO:2000652 regulation of secondary cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 3.3, "record_id": "Q8LPG9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZC0-1", "uniprot_id": [ { "id": "UXS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZC0", "type": "external" } ], "mass": 48631.0, "length": 435, "protein_name": "UDP-glucuronic acid decarboxylase 1", "gene_name": "UXS1", "organism": "Arabidopsis", "refseq_name": "UDP-glucuronic acid decarboxylase 1", "refseq_ac": [ { "id": "NP_190920", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190920", "type": "external" } ], "gene_names_uniprotkb": "UXS1; ATUXS1; F4P12.220", "gene_names_refseq": "ATUXS1; UDP-glucuronic acid decarboxylase 1; UXS1", "protein_names_uniprotkb": "UDP-glucuronic acid decarboxylase 1; 4.1.1.35; UDP-XYL synthase 1; UDP-glucuronate decarboxylase 1; UGD; UXS-1", "protein_names_refseq": "UDP-glucuronic acid decarboxylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G53520)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;12481102;14593172;18463617;19245862;19376835;20466843;23111157;23660473;25561503;26187819;27532006;27862469;30833711", "class_list": "", "function": "Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EAK3;Q9LFG7", "ec_number_list": [ { "id": "4.1.1.35", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.35", "type": "external" } ], "go_molecular_function": "GO:0070403 NAD+ binding;GO:0048040 UDP-glucuronate decarboxylase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0042732 D-xylose metabolic process;GO:0033320 UDP-D-xylose biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8VZC0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXL7-1", "uniprot_id": [ { "id": "GAT24_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXL7", "type": "external" } ], "mass": 32883.0, "length": 297, "protein_name": "GATA transcription factor 24", "gene_name": "GATA24; ZML1", "organism": "Arabidopsis", "refseq_name": "ZIM-like 1", "refseq_ac": [ { "id": "NP_566676", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566676", "type": "external" } ], "gene_names_uniprotkb": "GATA24; ZML1; GATA TRANSCRIPTION FACTOR 24; GATA24; MXL8.2; TIFY2B; ZIM LIKE 1; ZIM-like 1; ZML1", "gene_names_refseq": "GATA TRANSCRIPTION FACTOR 24; GATA24; TIFY2B; ZIM LIKE 1; ZIM-like 1; ZML1", "protein_names_uniprotkb": "GATA transcription factor 24; Protein TIFY 2B; ZIM-like 1 protein", "protein_names_refseq": "ZIM-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G21175)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10819329;11130713;11910074;14593172;14646219;14966217;15084732;17499004;25561503;27862469", "class_list": "", "function": "Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LF08;Q94B66;Q9LU42", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GXL7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GY82-1", "uniprot_id": [ { "id": "CRK45_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GY82", "type": "external" } ], "mass": 40231.0, "length": 351, "protein_name": "Cysteine-rich receptor-like protein kinase 45", "gene_name": "ARCK1; CRK45", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_192926", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192926", "type": "external" } ], "gene_names_uniprotkb": "ARCK1; CRK45; ARCK1; CRK45; T26M18.100; T26M18_100", "gene_names_refseq": "ABA- AND OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1; ARCK1; CRK45; T26M18.100; T26M18_100; cysteine-rich receptor-like protein kinase 45", "protein_names_uniprotkb": "Cysteine-rich receptor-like protein kinase 45; 2.7.11.1; ABA- and osmotic stress-inducible receptor-like cytosolic kinase 1; Cysteine-rich RLK45", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11890)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11910074;14593172;20500828;21711359;22074104;22225700;23583936;24215930;27862469", "class_list": "", "function": "Forms a complex with CRK36 that may negatively control abscisic acid (ABA) and osmotic stress signal transduction (PubMed:22225700). Involved in plant response to ABA during seed germination, early seedling growth and responses to abiotic stresses by inducing the expression of ABA-responsive genes and stress-inducible genes (PubMed:23583936). Acts as a positive regulator in disease resistance, downstream of NPR1 and WRKY70 (PubMed:24215930)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9T057", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006952 defense response;GO:0006955 immune response;GO:0007165 signal transduction;GO:0009409 response to cold;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GY82-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0S9-1", "uniprot_id": [ { "id": "PSA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0S9", "type": "external" } ], "mass": 99159.0, "length": 883, "protein_name": "Puromycin-sensitive aminopeptidase", "gene_name": "MPA1", "organism": "Arabidopsis", "refseq_name": "Peptidase M1 family protein", "refseq_ac": [ { "id": "NP_001154442", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154442", "type": "external" } ], "gene_names_uniprotkb": "MPA1; F24D7.4; F24D7_4; T12P18.21", "gene_names_refseq": "F24D7.4; F24D7_4", "protein_names_uniprotkb": "Puromycin-sensitive aminopeptidase; 3.4.11.14; AAP-S; Cytosol alanyl aminopeptidase; Meiotic prophase aminopeptidase 1; PSA", "protein_names_refseq": "Peptidase M1 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63770)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15522847;17151235;25561503;27862469", "class_list": "", "function": "Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. Plays an essential role during prophase I of meiosis. Required for correct meiotic reconbination in both male and female gametophytes., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4I3R2;Q0WMR3;Q9CAE1;Q9CAJ3", "ec_number_list": [], "go_molecular_function": "GO:0008237 metallopeptidase activity;GO:0008270 zinc ion binding;GO:0016285 alanyl aminopeptidase activity;GO:0004177 aminopeptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0005773 vacuole;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H0S9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWK7-1", "uniprot_id": [ { "id": "BEE3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWK7", "type": "external" } ], "mass": 29499.0, "length": 261, "protein_name": "Transcription factor BEE 3", "gene_name": "BEE3", "organism": "Arabidopsis", "refseq_name": "BR enhanced expression 3", "refseq_ac": [ { "id": "NP_177524", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177524", "type": "external" } ], "gene_names_uniprotkb": "BEE3; BHLH50; BR enhanced expression 3; EN76; F25P22.25; F25P22_25", "gene_names_refseq": "BEE3; BR enhanced expression 3; F25P22.25; F25P22_25", "protein_names_uniprotkb": "Transcription factor BEE 3; AtbHLH50; Basic helix-loop-helix protein 50; Protein Brassinosteroid enhanced expression 3; Transcription factor EN 76; bHLH 50; bHLH transcription factor bHLH050", "protein_names_refseq": "BR enhanced expression 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G73830)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11910074;12454087;12679534;12897250;14593172;14600211;27862469", "class_list": "", "function": "Positive regulator of brassinosteroid signaling., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C9S9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GWK7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GRX1-1", "uniprot_id": [ { "id": "BGL34_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GRX1", "type": "external" } ], "mass": 57542.0, "length": 511, "protein_name": "Myrosinase 4", "gene_name": "BGLU34; TGG4", "organism": "Arabidopsis", "refseq_name": "beta glucosidase 34", "refseq_ac": [ { "id": "NP_175191", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175191", "type": "external" } ], "gene_names_uniprotkb": "BGLU34; TGG4; BGLU34; F16N3.11; F16N3_11; TGG4; THIOGLUCOSIDE GLUCOHYDROLASE 4; beta glucosidase 34", "gene_names_refseq": "BGLU34; F16N3.11; F16N3_11; TGG4; THIOGLUCOSIDE GLUCOHYDROLASE 4; beta glucosidase 34", "protein_names_uniprotkb": "Myrosinase 4; 3.2.1.147; 3.2.1.21; AtBGLU34; Beta-glucosidase 34; Sinigrinase 4; Thioglucosidase 4", "protein_names_refseq": "beta glucosidase 34", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G47600)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;15604686;19703694;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Hydrolyzes sinigrin and, with lower efficiency, p-nitrophenyl beta-D-glucoside., [UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9SX92", "ec_number_list": [], "go_molecular_function": "GO:0008422 beta-glucosidase activity;GO:0019137 thioglucosidase activity;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0019760 glucosinolate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GRX1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY08-1", "uniprot_id": [ { "id": "LCMT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY08", "type": "external" } ], "mass": 37550.0, "length": 332, "protein_name": "Leucine carboxyl methyltransferase 1 homolog", "gene_name": "LCMT1; SBI1", "organism": "Arabidopsis", "refseq_name": "Leucine carboxyl methyltransferase", "refseq_ac": [ { "id": "NP_171712", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171712", "type": "external" } ], "gene_names_uniprotkb": "LCMT1; SBI1; LCMT1; SBI1; SUPPRESSOR OF BRI1; T7I23.16; T7I23_16", "gene_names_refseq": "LCMT1; SBI1; SUPPRESSOR OF BRI1; T7I23.16; T7I23_16; leucine carboxyl methyl transferase 1", "protein_names_uniprotkb": "Leucine carboxyl methyltransferase 1 homolog; 2.1.1.233; Protein SUPPRESSOR OF BRI1; [Phosphatase 2A protein]-leucine-carboxy methyltransferase 1", "protein_names_refseq": "Leucine carboxyl methyltransferase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02100)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;21558554;23111157;27862469;28741704", "class_list": "", "function": "Involved in brassinosteroid (BR) signaling., [UniProtKB, UniProtKB]; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A (PP2A) catalytic subunits to form alpha-leucine ester residues (Probable) (PubMed:21558554). Involved in brassinosteroid (BR) signaling. Plays a negative role in BR signaling pathway. Functions as a positive regulator of BRI1 receptor-kinase degradation. Methylates PP2A, thus facilitating its association with activated BRI1. This leads to receptor dephosphorylation and degradation, and thus to the termination of BR signaling. May act upstream of ASK7/BIN2 (PubMed:21558554). Involved in methylation of PP2A during environmental stress responses (PubMed:28741704)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81910;Q570N7", "ec_number_list": [ { "id": "2.1.1.233", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.233", "type": "external" } ], "go_molecular_function": "GO:0008757 S-adenosylmethionine-dependent methyltransferase activity;GO:0018423 protein C-terminal leucine carboxyl O-methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0032259 methylation;GO:1900458 negative regulation of brassinosteroid mediated signaling pathway;GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VY08-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZD4-1", "uniprot_id": [ { "id": "DEG15_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZD4", "type": "external" } ], "mass": 76126.0, "length": 709, "protein_name": "Glyoxysomal processing protease, glyoxysomal", "gene_name": "DEG15", "organism": "Arabidopsis", "refseq_name": "protease-like protein", "refseq_ac": [ { "id": "NP_174153", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174153", "type": "external" } ], "gene_names_uniprotkb": "DEG15; F3H9.2; F3H9.3; F3H9_2; GPP", "gene_names_refseq": "AtDEG15; DEG15; F3H9.3; F3H9_3; degradation of periplasmic proteins 15", "protein_names_uniprotkb": "Glyoxysomal processing protease, glyoxysomal; 3.4.21.-; AtDEG15; DEG-protease", "protein_names_refseq": "protease-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28320); (ath:AT1G28327)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "11130712;14593172;15333753;17592111;18952862;19748917;27862469", "class_list": "", "function": "Trypsin-like serine endopeptidase involved in the processing of glyoxysomal higher molecular weight precursor. The dimeric form carries out the specific cleavages needed to remove PTS2-containing presequences, whereas the monomeric form degrades the removed presequences and misfolded proteins (Probable). Not required for degradation of glyoxylate cycle enzymes during seedling development., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZA5", "ec_number_list": [], "go_molecular_function": "GO:0004175 endopeptidase activity;GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005777 peroxisome", "go_biological_process": "GO:0016485 protein processing", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VZD4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXA7-1", "uniprot_id": [ { "id": "SCD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXA7", "type": "external" } ], "mass": 131593.0, "length": 1187, "protein_name": "DENN domain and WD repeat-containing protein SCD1", "gene_name": "SCD1", "organism": "Arabidopsis", "refseq_name": "stomatal cytokinesis defective / SCD1 protein (SCD1)", "refseq_ac": [ { "id": "NP_850959", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850959", "type": "external" } ], "gene_names_uniprotkb": "SCD1; F27J15.17; F27J15_17", "gene_names_refseq": "F27J15.17; F27J15_17; SCD1; STOMATAL CYTOKINESIS-DEFECTIVE 1", "protein_names_uniprotkb": "DENN domain and WD repeat-containing protein SCD1; Protein STOMATAL CYTOKINESIS DEFECTIVE 1", "protein_names_refseq": "stomatal cytokinesis defective / SCD1 protein (SCD1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49040)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;12874123;20472560;23111157;23572148;24179130;25561503;27862469;30833711", "class_list": "", "function": "Involved in growth and development through its role in cytokinesis and polarized cell expansion (PubMed:12874123). Required for plasma membrane internalization. May function in clathrin-mediated membrane trafficking, including plasma membrane endocytosis, essential to both cytokinesis and cell expansion (PubMed:24179130). Acts as a negative regulator of basal resistance against bacteria (PubMed:20472560)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9M9A6;Q9M9A7", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0031410 cytoplasmic vesicle;GO:0030136 clathrin-coated vesicle;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0009825 multidimensional cell growth;GO:0032483 regulation of Rab protein signal transduction;GO:0045824 negative regulation of innate immune response;GO:0000911 cytokinesis by cell plate formation;GO:0010235 guard mother cell cytokinesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RXA7-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RVL2-1", "uniprot_id": [ { "id": "DEK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RVL2", "type": "external" } ], "mass": 238264.0, "length": 2151, "protein_name": "Calpain-type cysteine protease DEK1", "gene_name": "DEK1", "organism": "Arabidopsis", "refseq_name": "calpain-type cysteine protease family", "refseq_ac": [ { "id": "NP_001319240", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319240", "type": "external" } ], "gene_names_uniprotkb": "DEK1; ATDEK1; DEFECTIVE KERNEL 1; EMB1275; EMB80; EMBRYO DEFECTIVE 80; F7A10.23; F7A10_23; embryo defective 1275", "gene_names_refseq": "ATDEK1; DEFECTIVE KERNEL 1; DEK1; EMB1275; EMB80; EMBRYO DEFECTIVE 80; F7A10.23; F7A10_23; embryo defective 1275", "protein_names_uniprotkb": "Calpain-type cysteine protease DEK1; 3.4.22.-; AtDEK1; Phytocalpain DEK1; Protein DEFECTIVE KERNEL 1; Protein EMBRYO DEFECTIVE 1275; Protein EMBRYO DEFECTIVE 80", "protein_names_refseq": "calpain-type cysteine protease family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G55350)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "11130712;11929961;14506206;14593172;15266054;15308754;15647902;16167900;17933905;18463617;18952779;19812694;20466843;23095885;25315606;25561503;27862469", "class_list": "", "function": "Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active. Required for the formation of giant cells in sepals by determining cell fate and promoting endoreplication (PubMed:25315606)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8VXW6;Q949X8;Q9C8A6", "ec_number_list": [], "go_molecular_function": "GO:0004198 calcium-dependent cysteine-type endopeptidase activity;GO:0004197 cysteine-type endopeptidase activity;GO:0008234 cysteine-type peptidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0001708 cell fate specification;GO:0032877 positive regulation of DNA endoreduplication;GO:0040014 regulation of multicellular organism growth;GO:0042127 regulation of cell population proliferation;GO:0001558 regulation of cell growth", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8RVL2-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXQ3-1", "uniprot_id": [ { "id": "WAKLF_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXQ3", "type": "external" } ], "mass": 70817.0, "length": 642, "protein_name": "Wall-associated receptor kinase-like 6", "gene_name": "WAKL6; WAKL7", "organism": "Arabidopsis", "refseq_name": "wall associated kinase-like 6", "refseq_ac": [ { "id": "NP_173062", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173062", "type": "external" } ], "gene_names_uniprotkb": "WAKL6; WAKL7; T24D18.19; T24D18_19; T24D18_30; wall associated kinase-like 7", "gene_names_refseq": "T24D18.30; T24D18_30; WAKL6; wall associated kinase-like 6", "protein_names_uniprotkb": "Wall-associated receptor kinase-like 6; 2.7.11.-", "protein_names_refseq": "wall associated kinase-like 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16090); (ath:AT1G16110)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "11130712;11910074;12068092;14576286;27862469", "class_list": "", "function": "Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component., [UniProtKB]", "predicted_glycosites": 8, "predicted_n_glycosites": 7, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "Q9S9M6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009505 plant-type cell wall;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0007166 cell surface receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GXQ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAH7-1", "uniprot_id": [ { "id": "OPR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAH7", "type": "external" } ], "mass": 41168.0, "length": 372, "protein_name": "12-oxophytodienoate reductase 1", "gene_name": "OPR1", "organism": "Arabidopsis", "refseq_name": "12-oxophytodienoate reductase 1", "refseq_ac": [ { "id": "NP_177794", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177794", "type": "external" } ], "gene_names_uniprotkb": "OPR1; ATOPR1; F28O16.5; F28O16_5", "gene_names_refseq": "12-OXOPHYTODIENOATE REDUCTASE 1; 12-oxophytodienoate reductase 1; ARABIDOPSIS 12-OXOPHYTODIENOATE REDUCTASE 1; ATOPR1; F28O16.5; F28O16_5; OPR1", "protein_names_uniprotkb": "12-oxophytodienoate reductase 1; 1.3.1.42; 12-oxophytodienoate-10,11-reductase 1; AtOPR1; FS-AT-I; OPDA-reductase 1", "protein_names_refseq": "12-oxophytodienoate reductase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G76680)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10333582;10872231;11130712;11725945;12445129;14593172;16080145;17850744;19605548;27862469;9346960", "class_list": "", "function": "Specifically cleaves olefinic bonds in alpha,beta-unsaturated carbonyls and may be involved in detoxification or modification of these reactive compounds (PubMed:10872231, PubMed:9346960). May be involved in the biosynthesis or metabolism of oxylipin signaling molecules (Probable). In vitro, reduces 9R,13R-12-oxophytodienoic acid (9R,13R-OPDA) to 9R,13R-OPC-8:0, but only poorly 9S,13S-OPDA, the natural precursor of jasmonic acid (PubMed:10872231). Can detoxify the explosive 2,4,6-trinitrotoluene (TNT) in vitro and in vivo by catalyzing its nitroreduction to form hydroxylamino-dinitrotoluene (HADNT) (PubMed:19605548)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49259;Q9S806", "ec_number_list": [ { "id": "1.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.-", "type": "external" }, { "id": "1.3.1.42", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.42", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0010181 FMN binding;GO:0016629 12-oxophytodienoate reductase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0006633 fatty acid biosynthetic process;GO:0071456 cellular response to hypoxia;GO:0009611 response to wounding;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8LAH7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7G0-1", "uniprot_id": [ { "id": "ARFA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7G0", "type": "external" } ], "mass": 73668.0, "length": 665, "protein_name": "Auxin response factor 1", "gene_name": "ARF1", "organism": "Arabidopsis", "refseq_name": "auxin response factor 1", "refseq_ac": [ { "id": "NP_001031208", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031208", "type": "external" } ], "gene_names_uniprotkb": "ARF1; F23H11.7; F23H11_7; auxin response factor 1", "gene_names_refseq": "ARF1; F23H11.7; F23H11_7; auxin response factor 1", "protein_names_uniprotkb": "Auxin response factor 1", "protein_names_refseq": "auxin response factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G59750)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10318972;10476078;11130712;12036261;14593172;16176952;18986826;23111157;27862469;32446355;9188533", "class_list": "", "function": "Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Promotes flowering, stamen development, floral organ abscission and fruit dehiscence. Acts as a repressor of IAA2, IAA3 and IAA7. Together with RIN13, promotes leaf senescence and cell death (PubMed:32446355)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23664", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0008219 cell death;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8L7G0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY00-1", "uniprot_id": [ { "id": "ESP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY00", "type": "external" } ], "mass": 118832.0, "length": 1044, "protein_name": "Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1", "gene_name": "ESP3", "organism": "Arabidopsis", "refseq_name": "RNA helicase family protein", "refseq_ac": [ { "id": "NP_174527", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174527", "type": "external" } ], "gene_names_uniprotkb": "ESP3; EMB2733; EMBRYO DEFECTIVE 2733; ENHANCED SILENCING PHENOTYPE 3; F5D14.27; F5D14_27", "gene_names_refseq": "EMB2733; EMBRYO DEFECTIVE 2733; ENHANCED SILENCING PHENOTYPE 3; ESP3; F5D14.27; F5D14_27", "protein_names_uniprotkb": "Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1; 3.6.4.13; DEAH RNA helicase homolog PRP2; Protein EMBRYO DEFECTIVE 2733; Protein ENHANCED SILENCING PHENOTYPE 3", "protein_names_refseq": "RNA helicase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32490)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130712;14593172;15266054;16807317;17008405;18463617;19376835;20466843;21768351;23111157;23328941;23572148;23660473;23776212;24265739;25561503;26187819;27862469;30833711", "class_list": "", "function": "Involved in pre-mRNA splicing., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LQK8", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004386 helicase activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8VY00-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY17-1", "uniprot_id": [ { "id": "WAKLI_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY17", "type": "external" } ], "mass": 83384.0, "length": 751, "protein_name": "Wall-associated receptor kinase-like 22", "gene_name": "RFO1; WAKL22", "organism": "Arabidopsis", "refseq_name": "Wall-associated kinase family protein", "refseq_ac": [ { "id": "NP_178085", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178085", "type": "external" } ], "gene_names_uniprotkb": "RFO1; WAKL22; F20B17.27; F20B17_27; RFO1; WAKL22", "gene_names_refseq": "F20B17.27; F20B17_27; RESISTANCE TO FUSARIUM OXYSPORUM 1; RFO1; WAKL22", "protein_names_uniprotkb": "Wall-associated receptor kinase-like 22; 2.7.11.-", "protein_names_refseq": "Wall-associated kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79670)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12068092;14593172;15965251;27862469", "class_list": "", "function": "Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "Q4JQ55;Q9MA08", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0007166 cell surface receptor signaling pathway;GO:0009620 response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8RY17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWD2-1", "uniprot_id": [ { "id": "CNG12_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWD2", "type": "external" } ], "mass": 74806.0, "length": 649, "protein_name": "Probable cyclic nucleotide-gated ion channel 12", "gene_name": "CNGC12", "organism": "Arabidopsis", "refseq_name": "cyclic nucleotide-gated channel 12", "refseq_ac": [ { "id": "NP_001324486", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324486", "type": "external" } ], "gene_names_uniprotkb": "CNGC12; ATCNGC12; F11C10.14", "gene_names_refseq": "ATCNGC12; CNGC12; F11C10.14; cyclic nucleotide-gated channel 12", "protein_names_uniprotkb": "Probable cyclic nucleotide-gated ion channel 12; Cyclic nucleotide- and calmodulin-regulated ion channel 12", "protein_names_refseq": "cyclic nucleotide-gated channel 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46450)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;11500563;11910074;25561503;27862469", "class_list": "", "function": "Probable cyclic nucleotide-gated ion channel., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SKD5", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005261 monoatomic cation channel activity;GO:0030552 cAMP binding;GO:0030553 cGMP binding;GO:0005216 monoatomic ion channel activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0009617 response to bacterium;GO:0009620 response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GWD2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84XV2-1", "uniprot_id": [ { "id": "GTE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84XV2", "type": "external" } ], "mass": 43442.0, "length": 386, "protein_name": "Transcription factor GTE1", "gene_name": "GTE1; IMB1", "organism": "Arabidopsis", "refseq_name": "Transcription factor GTE6", "refseq_ac": [ { "id": "NP_181036", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181036", "type": "external" } ], "gene_names_uniprotkb": "GTE1; IMB1; F19I3.13; F19I3_13; GTE01; GTE1; IMB1; IMBIBITION-INDUCIBLE 1", "gene_names_refseq": "F19I3.13; F19I3_13; GLOBAL TRANSCRIPTION FACTOR GROUP E1; GTE01; GTE1; IMB1; IMBIBITION-INDUCIBLE 1", "protein_names_uniprotkb": "Transcription factor GTE1; Bromodomain-containing protein GTE1; Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1; Protein IMBIBITION-INDUCIBLE 1", "protein_names_refseq": "Transcription factor GTE6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34900)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;12466527;12969431;25561503;27862469", "class_list": "", "function": "Transcription activator that plays a role in the promotion of seed germination by both negatively and positively regulating the abscisic acid (ABA) and phytochrome A (phyA) transduction pathways, respectively., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64754;Q56W05", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0004674 protein serine/threonine kinase activity;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription;GO:0010030 positive regulation of seed germination", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84XV2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S9J3-1", "uniprot_id": [ { "id": "VPS38_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S9J3", "type": "external" } ], "mass": 39916.0, "length": 352, "protein_name": "Vacuolar protein sorting 38", "gene_name": "VPS38", "organism": "Arabidopsis", "refseq_name": "UV radiation resistance-associated protein", "refseq_ac": [ { "id": "NP_850197", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850197", "type": "external" } ], "gene_names_uniprotkb": "VPS38; F24L7.10; F24L7_10; USL1", "gene_names_refseq": "F24L7.10; F24L7_10", "protein_names_uniprotkb": "Vacuolar protein sorting 38; Protein UNFLATTENED AND SMALL LEAVES 1", "protein_names_refseq": "UV radiation resistance-associated protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G32760)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;20466843;27862469;29184027;29897620", "class_list": "", "function": "Dispensable for autophagy but essential for efficient targeting and degradation of biosynthetic and endocytic cargo to the vacuole (PubMed:29184027). Required for seedling development and plant growth as well as for seed storage proteins (SSPs) vacuolar trafficking (PubMed:29184027). Controls multiple aspects of development by affecting late endosome morphology and by regulating vacuolar and endocytic cargos (e.g PIN1 and PIN2) trafficking and distributions (e.g. polarity), thus influencing auxin transport orientation (PubMed:29184027, PubMed:29897620)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48841", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0043548 phosphatidylinositol 3-kinase binding;GO:0036313 phosphatidylinositol 3-kinase catalytic subunit binding;GO:1905394 retromer complex binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005829 cytosol;GO:0005771 multivesicular body;GO:0032585 multivesicular body membrane", "go_biological_process": "GO:0071985 multivesicular body sorting pathway;GO:0035493 SNARE complex assembly;GO:0006623 protein targeting to vacuole;GO:0009734 auxin-activated signaling pathway;GO:1990019 protein storage vacuole organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8S9J3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWA2-1", "uniprot_id": [ { "id": "MOC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWA2", "type": "external" } ], "mass": 30046.0, "length": 273, "protein_name": "Holliday junction resolvase MOC1, chloroplastic", "gene_name": "MOC1", "organism": "Arabidopsis", "refseq_name": "MutS2", "refseq_ac": [ { "id": "NP_180252", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180252", "type": "external" } ], "gene_names_uniprotkb": "MOC1; F12C20.12; F12C20_12", "gene_names_refseq": "F12C20.12; F12C20_12", "protein_names_uniprotkb": "Holliday junction resolvase MOC1, chloroplastic; 3.1.21.10; AtMOC1; Protein MONOKARYOTIC CHLOROPLAST 1", "protein_names_refseq": "MutS2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26840)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;11910074;14593172;27862469;28495749", "class_list": "", "function": "A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products. Mediates chloroplast nucleoid segregation during chloroplast division., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81023", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000400 four-way junction DNA binding;GO:0008821 crossover junction DNA endonuclease activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006310 DNA recombination;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GWA2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H186-1", "uniprot_id": [ { "id": "PBL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H186", "type": "external" } ], "mass": 43087.0, "length": 389, "protein_name": "Probable serine/threonine-protein kinase PBL1", "gene_name": "PBL1", "organism": "Arabidopsis", "refseq_name": "PBS1-like 1", "refseq_ac": [ { "id": "NP_191105", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191105", "type": "external" } ], "gene_names_uniprotkb": "PBL1; BLK; CCE5; PBS1-like 1; T22E16.110", "gene_names_refseq": "PBL1; PBS1-like 1", "protein_names_uniprotkb": "Probable serine/threonine-protein kinase PBL1; 2.7.11.1; BIK1-like protein kinase; PBS1-like protein 1; Protein CHANGED CALCIUM ELEVATION 5", "protein_names_refseq": "PBS1-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55450)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;14593172;17317660;20404519;20413097;20466843;22504181;23111157;23431184;25522736;25561503;27862469;30833711;34535661", "class_list": "", "function": "Contributes to pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI) signaling, including calcium signaling and root growth inhibition, and defense responses downstream of FLS2 (PubMed:20413097, PubMed:25522736). Acts additively with BIK1 in PTI defenses (PubMed:20413097, PubMed:25522736). Seems not required for flg22-induced MAPK activation (Probable). Required for Pep1-induced defenses (PubMed:25522736). Pep1 is an endogenous elicitor that potentiates PAMP-inducible plant responses (PubMed:23431184, PubMed:25522736). Required during SCOOP small peptides (e.g. SCOOP10 and SCOOP12) perception and signaling; receptor-like cytosolic kinases (RLCK) activated by BAK1/SERK3 and SERK4 coreceptors when associated with MIK2 upon the perception of SCOOP peptides (PubMed:34535661)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84WH8;Q9M2T4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006952 defense response;GO:0002237 response to molecule of bacterial origin;GO:1900424 regulation of defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8H186-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TI3-1", "uniprot_id": [ { "id": "OBE4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TI3", "type": "external" } ], "mass": 130732.0, "length": 1162, "protein_name": "Protein OBERON 4", "gene_name": "OBE4; TTA2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "OBE4; TTA2; MAA21.130; TITANIA 2", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein OBERON 4; Protein TITANIA 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63500)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;14593172;19376835;19392692;20466843;22378640;23111157;23328941;23572148;25561503;27196372;27862469;28011693;30833711", "class_list": "", "function": "Probable transcription factor that functions redundantly with OBE3 in specification of the hypophysis and establishment of the embryonic root (PubMed:22378640). Involved in the activation of ARF5/MP-dependent gene expression during embryonic root meristem initiation (PubMed:22378640). Involved in shoot meristem homeostasis (PubMed:27196372)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 17, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LY65", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0001708 cell fate specification;GO:0006351 DNA-templated transcription;GO:0010468 regulation of gene expression;GO:0009880 embryonic pattern specification;GO:0010071 root meristem specification", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q84TI3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7Y8-1", "uniprot_id": [ { "id": "KN12B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7Y8", "type": "external" } ], "mass": 146612.0, "length": 1313, "protein_name": "Kinesin-like protein KIN-12B", "gene_name": "KIN12B; KINESIN-12B", "organism": "Arabidopsis", "refseq_name": "phragmoplast-associated kinesin-related protein", "refseq_ac": [ { "id": "NP_189009", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189009", "type": "external" } ], "gene_names_uniprotkb": "KIN12B; KINESIN-12B; MDB19.16; PAKRP1L", "gene_names_refseq": "KINESIN-12B; PAKRP1L", "protein_names_uniprotkb": "Kinesin-like protein KIN-12B; AtPAKRP1L; Phragmoplast-associated kinesin-related protein 1-like protein", "protein_names_refseq": "phragmoplast-associated kinesin-related protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23670)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10819329;11130713;11472632;14593172;15258761;16448571;17720869;22038119;22709276;27862469", "class_list": "", "function": "Plus-end directed kinesin-like motor enzyme that plays a critical role in the organization of phragmoplast microtubules during cytokinesis. Constitutes a signaling module in association with serine/threonine-protein kinase TIO that is required to support phragmoplast expansion and cell-plate growth in plant cells., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LUG0", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0016887 ATP hydrolysis activity;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005871 kinesin complex;GO:0009524 phragmoplast", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0007112 male meiosis cytokinesis;GO:0055046 microgametogenesis;GO:0080175 phragmoplast microtubule organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8L7Y8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LCU7-1", "uniprot_id": [ { "id": "MECR_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LCU7", "type": "external" } ], "mass": 40823.0, "length": 375, "protein_name": "Enoyl-[acyl-carrier-protein] reductase, mitochondrial", "gene_name": "F16L2.2; T6D9.100", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F16L2.2; T6D9.100", "gene_names_refseq": "", "protein_names_uniprotkb": "Enoyl-[acyl-carrier-protein] reductase, mitochondrial; 1.3.1.104; 2-enoyl thioester reductase", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G45770)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14593172;14671022;23328941;25561503;25732537;27862469;30833711", "class_list": "", "function": "Catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis (fatty acid synthesis type II). Fatty acid chain elongation in mitochondria uses acyl carrier protein (ACP) as an acyl group carrier, but the enzyme accepts both ACP and CoA thioesters as substrates in vitro., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4H6;Q9M166", "ec_number_list": [ { "id": "1.3.1.104", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.104", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0005507 copper ion binding;GO:0141148 enoyl-[acyl-carrier-protein] reductase (NADPH) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0006633 fatty acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LCU7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WU2-1", "uniprot_id": [ { "id": "UBP13_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WU2", "type": "external" } ], "mass": 130649.0, "length": 1115, "protein_name": "Ubiquitin C-terminal hydrolase 13", "gene_name": "UBP13", "organism": "Arabidopsis", "refseq_name": "ubiquitin-specific protease 13", "refseq_ac": [ { "id": "NP_001326292", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326292", "type": "external" } ], "gene_names_uniprotkb": "UBP13; AtUBP13; F26K24.20; MEC18.1; ubiquitin-specific protease 13", "gene_names_refseq": "AtUBP13; UBP13; ubiquitin-specific protease 13", "protein_names_uniprotkb": "Ubiquitin C-terminal hydrolase 13; 3.4.19.12; AtUBP13; Deubiquitinating enzyme 13; Ubiquitin thioesterase 13; Ubiquitin-specific-processing protease 13", "protein_names_refseq": "ubiquitin-specific protease 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G11910)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10907853;11115897;11130713;14593172;26888284;27862469;29339500", "class_list": "", "function": "Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity). Positive regulator of root meristem development that, together with UBP12, prevents the ubiquitination and turnover of RGFR1 induced by the RGF1 hormone peptide, thus influencing PLT1 and PLT2 expression (PubMed:29339500)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WVD3;Q9FU99;Q9SF08", "ec_number_list": [], "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009506 plasmodesma", "go_biological_process": "GO:0070646 protein modification by small protein removal;GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0031647 regulation of protein stability;GO:0009867 jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84WU2-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWY3-1", "uniprot_id": [ { "id": "ISW2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWY3", "type": "external" } ], "mass": 122558.0, "length": 1056, "protein_name": "ISWI chromatin-remodeling complex ATPase CHR11", "gene_name": "CHR11", "organism": "Arabidopsis", "refseq_name": "chromatin-remodeling protein 11", "refseq_ac": [ { "id": "NP_001189827", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189827", "type": "external" } ], "gene_names_uniprotkb": "CHR11; F24P17.13; F24P17_13", "gene_names_refseq": "CHR11; F24P17.13; F24P17_13; chromatin-remodeling protein 11", "protein_names_uniprotkb": "ISWI chromatin-remodeling complex ATPase CHR11; 3.6.4.-; ISW2-like; Protein CHROMATIN REMODELING 11; Sucrose nonfermenting protein 2 homolog", "protein_names_refseq": "chromatin-remodeling protein 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06400)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130713;14593172;16286646;18463617;20466843;21768351;22694359;23328941;23660473;23691993;23776212;24265739;24606212;25561503;27680998;27862469;28011693;29654922", "class_list": "", "function": "Possesses intrinsic ATP-dependent nucleosome-remodeling activity. Constitutes the catalytic subunit of several complexes capable of forming ordered nucleosome arrays on chromatin (By similarity). Involved in the formation of nucleosome distribution patterns (PubMed:24606212). Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte (PubMed:16286646). Required for the maintenance of the plant vegetative phase. In association with RLT1 or RLT2 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC (PubMed:22694359). Necessary to acquire heat stress (HS) memory (PubMed:27680998)., [UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4JAW0;F4JAW1;Q9SQU3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0000785 chromatin;GO:0000812 Swr1 complex;GO:0031010 ISWI-type complex", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0031507 heterochromatin formation;GO:1900036 positive regulation of cellular response to heat;GO:0009553 embryo sac development;GO:0009561 megagametogenesis", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8RWY3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84N64-1", "uniprot_id": [ { "id": "ARC5_ARATH", "url": "https://www.uniprot.org/uniprot/Q84N64", "type": "external" } ], "mass": 87171.0, "length": 777, "protein_name": "Dynamin-like protein ARC5", "gene_name": "ARC5", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_188606", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188606", "type": "external" } ], "gene_names_uniprotkb": "ARC5; DRP5B; Dynamin related protein 5B; MMB12.21", "gene_names_refseq": "ACCUMULATION AND REPLICATION OF CHLOROPLAST 5; ARC5; DRP5B; Dynamin related protein 5B", "protein_names_uniprotkb": "Dynamin-like protein ARC5; 3.6.5.5; AtARC5; Dynamin-related protein 5B; Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 5", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19720)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "10417716;10907853;11130713;12232072;12642673;16998069;18764889;18812496;20179140;20491669;23020316;23111157;25561503;25736058;26187819;27862469;27988788;29466386;30833711;32005784;8819323", "class_list": "", "function": "Mechanochemical GTPase component of both plastid and peroxisome division machinery (PubMed:32005784). Required for the last steps of plastid division specifically in mesophyll-cell, when the narrow isthmus breaks, facilitating the separation of the daughter plastids (PubMed:29466386). Necessary for peroxisome activities. Seems to influence stromule (stroma-filled tubular extensions of the plastid envelope membrane) length and frequency (PubMed:29466386)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EB39;Q9LJM3", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0005874 microtubule;GO:0016020 membrane", "go_biological_process": "GO:0016559 peroxisome fission;GO:0007623 circadian rhythm;GO:0009739 response to gibberellin;GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q84N64-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84ND9-1", "uniprot_id": [ { "id": "POLIB_ARATH", "url": "https://www.uniprot.org/uniprot/Q84ND9", "type": "external" } ], "mass": 115563.0, "length": 1034, "protein_name": "DNA polymerase I B, chloroplastic/mitochondrial", "gene_name": "POLGAMMA1; POLIB", "organism": "Arabidopsis", "refseq_name": "polymerase gamma 1", "refseq_ac": [ { "id": "NP_188690", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188690", "type": "external" } ], "gene_names_uniprotkb": "POLGAMMA1; POLIB; K10D20.8; PolIB; polymerase I B; polymerase gamma 1", "gene_names_refseq": "POLGAMMA1; PolIB; polymerase I B; polymerase gamma 1", "protein_names_uniprotkb": "DNA polymerase I B, chloroplastic/mitochondrial; 2.7.7.7; AtPolI-like B; DNA polymerase PolI-like B; POLGAMMA1; Polymerase gamma 1", "protein_names_refseq": "polymerase gamma 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20540)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10907853;11130713;12837951;15993837;16169894;21427281;22074104;27862469", "class_list": "", "function": "In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity (By similarity). Required for DNA replication and accumulation in plastids and mitochondria., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LJU4", "ec_number_list": [ { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.102", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.102", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "3.4.23.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.23.-", "type": "external" }, { "id": "4.2.99.-", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.-", "type": "external" } ], "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0003677 DNA binding;GO:0008408 3'-5' exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006302 double-strand break repair;GO:0006264 mitochondrial DNA replication;GO:0033259 plastid DNA replication;GO:0006281 DNA repair", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84ND9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY00-1", "uniprot_id": [ { "id": "SIA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY00", "type": "external" } ], "mass": 49480.0, "length": 440, "protein_name": "Sialyltransferase-like protein 2", "gene_name": "SIA2", "organism": "Arabidopsis", "refseq_name": "Glycosyltransferase family 29 (sialyltransferase) family protein", "refseq_ac": [ { "id": "NP_190451", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190451", "type": "external" } ], "gene_names_uniprotkb": "SIA2; T21J18.90; sialyltransferase-like 2", "gene_names_refseq": "SIA2; sialyltransferase-like 2", "protein_names_uniprotkb": "Sialyltransferase-like protein 2; 2.4.-.-", "protein_names_refseq": "Glycosyltransferase family 29 (sialyltransferase) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48820)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;19470101;24825296;24905498;27862469", "class_list": "glycogene;glycosyltransferase", "function": "May be involved in the transfer of 2-keto-3-deoxy-D-lyxo-heptulosaric acid (Dha) and/or 2-keto-3-deoxy-D-manno-octulosonic acid (Kdo) on the homogalacturonan backbone of rhamnogalacturonan-II. Required for efficient pollen grain germination and pollen tube elongation (PubMed:24825296). Does not possess sialyltransferase activity in vitro (PubMed:19470101)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9M301", "ec_number_list": [], "go_molecular_function": "GO:0016757 glycosyltransferase activity;GO:0008373 sialyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0009846 pollen germination;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RY00-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7U4-1", "uniprot_id": [ { "id": "P23A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7U4", "type": "external" } ], "mass": 25471.0, "length": 241, "protein_name": "Co-chaperone protein p23-1", "gene_name": "P23-1", "organism": "Arabidopsis", "refseq_name": "HSP20-like chaperones superfamily protein", "refseq_ac": [ { "id": "NP_192154", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192154", "type": "external" } ], "gene_names_uniprotkb": "P23-1; P23; T14P8.5; T14P8_5", "gene_names_refseq": "T14P8.5; T14P8_5", "protein_names_uniprotkb": "Co-chaperone protein p23-1; Atp23-1; p23 co-chaperone", "protein_names_refseq": "HSP20-like chaperones superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02450)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;14593172;19376835;20349287;20493581;23111157;23776212;25561503;26091701;26163704;27862469;28011693;30833711", "class_list": "", "function": "Acts as a co-chaperone for HSP90 (PubMed:20349287). Controls root development through the modulation of auxin distribution in the root meristem (PubMed:26163704)., [UniProtKB, PubMed, PubMed]; Acts as a co-chaperone for HSP90., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81288;Q9FT78", "ec_number_list": [], "go_molecular_function": "GO:0051087 protein-folding chaperone binding;GO:0051879 Hsp90 protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0101031 protein folding chaperone complex", "go_biological_process": "GO:0010628 positive regulation of gene expression;GO:0006457 protein folding;GO:0009408 response to heat;GO:0051131 chaperone-mediated protein complex assembly;GO:0010449 root meristem growth", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8L7U4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDW9-1", "uniprot_id": [ { "id": "XTH9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDW9", "type": "external" } ], "mass": 33141.0, "length": 290, "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 9", "gene_name": "XTH9", "organism": "Arabidopsis", "refseq_name": "xyloglucan endotransglucosylase/hydrolase 9", "refseq_ac": [ { "id": "NP_192230", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192230", "type": "external" } ], "gene_names_uniprotkb": "XTH9; EXGT-A6; F4C21.14; F4C21_14; XTR16", "gene_names_refseq": "F4C21.14; F4C21_14; XTH9; xyloglucan endotransglucosylase/hydrolase 9", "protein_names_uniprotkb": "Xyloglucan endotransglucosylase/hydrolase protein 9; 2.4.1.207; At-XTH9; XTH-9", "protein_names_refseq": "xyloglucan endotransglucosylase/hydrolase 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G03210)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;10945279;11673616;12514239;12856951;14593172;18463617;20466843;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZR10", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762 xyloglucan:xyloglucosyl transferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0071555 cell wall organization;GO:0009834 plant-type secondary cell wall biogenesis;GO:0010411 xyloglucan metabolic process;GO:0042546 cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LDW9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L983-1", "uniprot_id": [ { "id": "COR28_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L983", "type": "external" } ], "mass": 24606.0, "length": 218, "protein_name": "Cold-regulated protein 28", "gene_name": "COR28", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_567946", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567946", "type": "external" } ], "gene_names_uniprotkb": "COR28; F17I5.170; F17I5_170", "gene_names_refseq": "F17I5.170; F17I5_170", "protein_names_uniprotkb": "Cold-regulated protein 28", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33980)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12172015;16121258;17304219;27837007;27862469;27990760", "class_list": "", "function": "Together with COR27, involved in central circadian clock regulation and in flowering promotion, by binding to the chromatin of clock-associated evening genes TOC1, PRR5, ELF4 and cold-responsive genes in order to repress their transcription (PubMed:27837007, PubMed:27990760). Negative regulator of freezing tolerance (PubMed:27837007)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81766", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0045892 negative regulation of DNA-templated transcription;GO:0042752 regulation of circadian rhythm;GO:0048511 rhythmic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L983-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZA8-1", "uniprot_id": [ { "id": "ULT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZA8", "type": "external" } ], "mass": 26744.0, "length": 237, "protein_name": "Protein ULTRAPETALA 1", "gene_name": "ULT1", "organism": "Arabidopsis", "refseq_name": "Developmental regulator, ULTRAPETALA", "refseq_ac": [ { "id": "NP_567799", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567799", "type": "external" } ], "gene_names_uniprotkb": "ULT1; F26K10.70; F26K10_70; ULTRAPETALA1; ULTRAPETALA; ULT", "gene_names_refseq": "F26K10.70; F26K10_70; ULT1; ULTRAPETALA1; ULTRAPETALA; ULT", "protein_names_uniprotkb": "Protein ULTRAPETALA 1", "protein_names_refseq": "Developmental regulator, ULTRAPETALA", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28190)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11910074;15342527;15673576;18441215;23632855;26903506;27862469", "class_list": "", "function": "Putative transcription factor that acts as a key negative regulator of cell accumulation in shoot and floral meristems. Negatively regulates the size of the WUSCHEL (WUS)-expressing organizing center in inflorescence meristems. May act by down-regulating expression of WUS. Acts as an antirepressor that counteracts EMF1 action through modulation of trimethylated 'Lys-4' on histone H3 (H3K4me3) marks on target gene loci (including genes involved in salt stress response and flower development) (PubMed:23632855). Collaboratively with RBL and CYP40/SQN, influences floral meristem (FM) determinacy in an AGAMOUS and SUPERMAN-dependent manner, thus contributing to the floral developmental homeostasis (PubMed:18441215)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8S8;Q9M0I8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0040029 epigenetic regulation of gene expression;GO:0009909 regulation of flower development;GO:0009910 negative regulation of flower development;GO:0010022 meristem determinacy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GZA8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPQ8-1", "uniprot_id": [ { "id": "MSSP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPQ8", "type": "external" } ], "mass": 78525.0, "length": 729, "protein_name": "Monosaccharide-sensing protein 2", "gene_name": "MSSP2; TMT2", "organism": "Arabidopsis", "refseq_name": "tonoplast monosaccharide transporter2", "refseq_ac": [ { "id": "NP_001154287", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154287", "type": "external" } ], "gene_names_uniprotkb": "MSSP2; TMT2; F23E12.140; F23E12_140; TMT2", "gene_names_refseq": "F23E12.140; F23E12_140; TMT2; tonoplast monosaccharide transporter2", "protein_names_uniprotkb": "Monosaccharide-sensing protein 2; AtTMT2; Sugar transporter MSSP2; Tonoplast monosaccharide transporter 2", "protein_names_refseq": "tonoplast monosaccharide transporter2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35300)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;14593172;16923188;17158605;17307167;19245862;19423640;20374526;20466843;21668536;21768351;22060019;25561503;26187819;27419465;27862469;28011693", "class_list": "", "function": "Sugar proton-coupled antiporter which contributes to vacuolar sugar import (e.g. monosaccharides including glucose, sucrose and fructose), particularly during stress responses (e.g. in response to cold)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2Y0;O65497", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0000325 plant-type vacuole;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0009409 response to cold;GO:0055085 transmembrane transport;GO:0009749 response to glucose;GO:0009414 response to water deprivation;GO:0009744 response to sucrose", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8LPQ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GX93-1", "uniprot_id": [ { "id": "CLCE_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GX93", "type": "external" } ], "mass": 75556.0, "length": 710, "protein_name": "Chloride channel protein CLC-e", "gene_name": "CLC-E", "organism": "Arabidopsis", "refseq_name": "chloride channel E", "refseq_ac": [ { "id": "NP_567985", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567985", "type": "external" } ], "gene_names_uniprotkb": "CLC-E; ATCLC-E; CBSCLC3; CHLORIDE CHANNEL E; CLCE; F15J1.10; F15J1_10; F23E12.10; chloride channel E", "gene_names_refseq": "ATCLC-E; CHLORIDE CHANNEL E; CLC-E; CLCE; F15J1.10; F15J1_10; chloride channel E", "protein_names_uniprotkb": "Chloride channel protein CLC-e; AtCLC-e; AtCLCe; CBS domain-containing protein CBSCLC3", "protein_names_refseq": "chloride channel E", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35440)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11910074;19400948;26904077;27862469;31201341", "class_list": "", "function": "Voltage-gated thylakoid chloride (Cl) channel/transporter involved in chloride homeostasis after transition from light to dark (PubMed:26904077). Influences chloroplast ultrastructure and subsequent photosynthetic electron transport (PubMed:26904077). During photosynthetic response on transition from dark to low light, involved in a sequential mechanism of adaptation; VCCN1 and CLCe first trigger the activation of photoprotection, which is later down-regulated by KEA3 to a low steady state, while adjusting electron transport (PubMed:31201341). Regulates photosynthesis by a pH-independent mechanism likely involving Cl(-) homeostasis (PubMed:31201341)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65486;Q93XN4;Q9SVX1", "ec_number_list": [], "go_molecular_function": "GO:0005254 chloride channel activity", "go_cellular_component": "GO:0034707 chloride channel complex;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:1902476 chloride transmembrane transport;GO:0010027 thylakoid membrane organization;GO:0042548 regulation of photosynthesis, light reaction", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GX93-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY73-1", "uniprot_id": [ { "id": "DXO_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY73", "type": "external" } ], "mass": 60381.0, "length": 544, "protein_name": "NAD-capped RNA hydrolase DXO1", "gene_name": "DXO1", "organism": "Arabidopsis", "refseq_name": "glycine-rich protein", "refseq_ac": [ { "id": "NP_193498", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193498", "type": "external" } ], "gene_names_uniprotkb": "DXO1; DL4845W; FCAALL.74; dl4845w", "gene_names_refseq": "DL4845W; FCAALL.74", "protein_names_uniprotkb": "NAD-capped RNA hydrolase DXO1; 3.6.1.-; DeNADding enzyme DXO1", "protein_names_refseq": "glycine-rich protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G17620)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;14593172;18463617;19376835;20466843;21768351;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27862469;30833711;30949699;9461215", "class_list": "", "function": "Decapping enzyme for NAD-capped RNAs: specifically hydrolyzes the nicotinamide adenine dinucleotide (NAD) cap from a subset of RNAs by removing the entire NAD moiety from the 5'-end of an NAD-capped RNA., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23603", "ec_number_list": [ { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" } ], "go_molecular_function": "GO:0034353 mRNA 5'-diphosphatase activity;GO:0003723 RNA binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0000166 nucleotide binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0000956 nuclear-transcribed mRNA catabolic process;GO:0110155 NAD-cap decapping;GO:0110154 RNA decapping", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8RY73-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYC7-1", "uniprot_id": [ { "id": "PGL1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYC7", "type": "external" } ], "mass": 34909.0, "length": 313, "protein_name": "PGR5-like protein 1B, chloroplastic", "gene_name": "PGRL1B", "organism": "Arabidopsis", "refseq_name": "PGR5-like B", "refseq_ac": [ { "id": "NP_192933", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192933", "type": "external" } ], "gene_names_uniprotkb": "PGRL1B; F16J13.30; F16J13_30; PGR5-like B", "gene_names_refseq": "F16J13.30; F16J13_30; PGR5-like B; PGRL1B", "protein_names_uniprotkb": "PGR5-like protein 1B, chloroplastic; Ferredoxin-plastoquinone reductase 2", "protein_names_refseq": "PGR5-like B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11960)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;11910074;14593172;18243102;20392519;22223895;23290914;23328941;25561503;27862469;30833711", "class_list": "", "function": "Ferredoxin-plastoquinone reductase involved in cyclic electron flow (CEF) around photosystem I. The homodimer is probably not involved in CEF., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZ61", "ec_number_list": [], "go_molecular_function": "GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors", "go_cellular_component": "GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009773 photosynthetic electron transport in photosystem I", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8GYC7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUP3-1", "uniprot_id": [ { "id": "PDS5C_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUP3", "type": "external" } ], "mass": 94209.0, "length": 873, "protein_name": "Sister chromatid cohesion protein PDS5 homolog C", "gene_name": "PDS5C", "organism": "Arabidopsis", "refseq_name": "transcriptional regulator", "refseq_ac": [ { "id": "NP_194916", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194916", "type": "external" } ], "gene_names_uniprotkb": "PDS5C; F11C18.80; F11C18_80", "gene_names_refseq": "F11C18.80; F11C18_80", "protein_names_uniprotkb": "Sister chromatid cohesion protein PDS5 homolog C; AtPDS5C; Precocious dissociation of sisters protein 5-C", "protein_names_refseq": "transcriptional regulator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31880)", "pathway_count": 1, "publication_count": 24, "publication_id_list": "10617198;14593172;18433157;19245862;19253305;19376835;20466843;21768351;23111157;23328941;23572148;23660473;23776212;24043427;25561503;26091701;26187819;26648949;27419465;27532006;27862469;28011693;29654922;30833711", "class_list": "", "function": "Cohesin cofactor dispensable during the meiotic division but playing an important role in DNA repair by homologous recombination (HR) probably by helping SMC5/SMC6 complex (PubMed:26648949). Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin (PubMed:26648949). May couple sister chromatid cohesion during mitosis to DNA replication (By similarity). Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair (PubMed:26648949)., [UniProtKB, PubMed, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 60, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZU8;Q9SZ55", "ec_number_list": [], "go_molecular_function": "GO:0043565 sequence-specific DNA binding;GO:0140670 cohesin unloader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005874 microtubule;GO:0000785 chromatin", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0051301 cell division;GO:0010468 regulation of gene expression;GO:0007064 mitotic sister chromatid cohesion", "synthesized_glycan_count": 0, "hit_score": 2.5, "record_id": "Q8GUP3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5Y9-1", "uniprot_id": [ { "id": "PANK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5Y9", "type": "external" } ], "mass": 99640.0, "length": 901, "protein_name": "Pantothenate kinase 2", "gene_name": "PANK2", "organism": "Arabidopsis", "refseq_name": "pantothenate kinase 2", "refseq_ac": [ { "id": "NP_194945", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194945", "type": "external" } ], "gene_names_uniprotkb": "PANK2; ATPANK2; F10M6.180; F10M6_180; F10N7.10; pantothenate kinase 2", "gene_names_refseq": "ATPANK2; F10M6.180; F10M6_180; PANK2; pantothenate kinase 2", "protein_names_uniprotkb": "Pantothenate kinase 2; AtPANK2; Pantothenic acid kinase 2", "protein_names_refseq": "pantothenate kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32180)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "10617198;14593172;16897480;18463617;19245862;19253305;19376835;20466843;21768351;23111157;23328941;23572148;23660473;23776212;24043427;25561503;26091701;26187819;27322068;27419465;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration. Functionally redudant with PANK1. The phosphatase activity shows preference for normal or oxidatively damaged intermediates of 4'-phosphopantetheine, which provides strong indirect evidence that the phosphatase activity pre-empts damage in the CoA pathway. Hydrolyzing excess 4'-phosphopantetheine could constitute a directed overflow mechanism to prevent its oxidation to the S-sulfonate, sulfonate, or other forms. Hydrolyzing 4'-phosphopantetheine sulfonate or S-sulfonate would forestall their conversion to inactive forms of CoA and acyl carrier protein., [UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49372;O49374", "ec_number_list": [ { "id": "2.7.1.33", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.33", "type": "external" }, { "id": "3.1.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.-", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004594 pantothenate kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0015937 coenzyme A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "Q8L5Y9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWW7-1", "uniprot_id": [ { "id": "URGT4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWW7", "type": "external" } ], "mass": 37125.0, "length": 337, "protein_name": "UDP-rhamnose/UDP-galactose transporter 4", "gene_name": "NST-K1; URGT4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "NST-K1; URGT4; ATNST-KT1; F23K16.20; F23K16_20; NST-KT1; UDP-Gal transporter 4; URGT4", "gene_names_refseq": "", "protein_names_uniprotkb": "UDP-rhamnose/UDP-galactose transporter 4; AtNST-KT1; Bi-functional UDP-rhamnose/UDP-galactose transporter; Nucleotide sugar transporter-KT 1; UDP-Rha/UDP-Gal transporter 4", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39390)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;14593172;16831428;18463617;20466843;22438062;25053812;25561503;25804536;27419465;27862469", "class_list": "", "function": "Nucleotide-sugar transporter that transports UDP-rhamnose or UDP-galactose and UMP in a strict counter-exchange mode., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVB8", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0015297 antiporter activity;GO:0005338 nucleotide-sugar transmembrane transporter activity;GO:0005459 UDP-galactose transmembrane transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0072334 UDP-galactose transmembrane transport;GO:0015780 nucleotide-sugar transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8RWW7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ59-1", "uniprot_id": [ { "id": "YUC6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ59", "type": "external" } ], "mass": 46638.0, "length": 417, "protein_name": "Indole-3-pyruvate monooxygenase YUCCA6", "gene_name": "YUC6", "organism": "Arabidopsis", "refseq_name": "Flavin-binding monooxygenase family protein", "refseq_ac": [ { "id": "NP_197944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197944", "type": "external" } ], "gene_names_uniprotkb": "YUC6; AtYUC6; HYT1; T14C9.160; T14C9_160; YUCCA6", "gene_names_refseq": "AtYUC6; T14C9.160; T14C9_160; YUC6; YUCCA6", "protein_names_uniprotkb": "Indole-3-pyruvate monooxygenase YUCCA6; 1.14.13.168; Flavin-containing monooxygenase YUCCA6; Protein HYPERTALL1", "protein_names_refseq": "Flavin-binding monooxygenase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25620)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;14593172;16818609;17461789;17885085;18557819;18628351;20421476;22025721;22986790;23188833;27862469", "class_list": "", "function": "Involved in auxin biosynthesis via the indole-3-pyruvic acid (IPA) pathway. Also able to convert in vitro phenyl pyruvate (PPA) to phenyl acetic acid (PAA). Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.13.168", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.13.168", "type": "external" }, { "id": "1.-.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.-.-.-", "type": "external" } ], "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0050661 NADP binding;GO:0004497 monooxygenase activity;GO:0047134 protein-disulfide reductase [NAD(P)H] activity;GO:0004499 N,N-dimethylaniline monooxygenase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0010038 response to metal ion;GO:0009723 response to ethylene;GO:0009819 drought recovery;GO:0009851 auxin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8VZ59-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYL1-1", "uniprot_id": [ { "id": "KAD5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYL1", "type": "external" } ], "mass": 65738.0, "length": 588, "protein_name": "Adenylate kinase 5, chloroplastic", "gene_name": "T25C13.50; T25C13_50", "organism": "Arabidopsis", "refseq_name": "adenylate kinase family protein", "refseq_ac": [ { "id": "NP_198367", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198367", "type": "external" } ], "gene_names_uniprotkb": "T25C13.50; T25C13_50", "gene_names_refseq": "T25C13.50; T25C13_50", "protein_names_uniprotkb": "Adenylate kinase 5, chloroplastic; 2.7.4.3; AMK5; ATP-AMP transphosphorylase 5; ATP:AMP phosphotransferase; Adenylate monophosphate kinase 5", "protein_names_refseq": "adenylate kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35170)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;14593172;18162585;18463617;20466843;23572148;27862469", "class_list": "", "function": "Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FYQ6;Q9FYQ7", "ec_number_list": [ { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" } ], "go_molecular_function": "GO:0004017 AMP kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009536 plastid", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VYL1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S9G8-1", "uniprot_id": [ { "id": "SPL7_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S9G8", "type": "external" } ], "mass": 89617.0, "length": 801, "protein_name": "Squamosa promoter-binding-like protein 7", "gene_name": "SPL7", "organism": "Arabidopsis", "refseq_name": "squamosa promoter binding protein-like 7", "refseq_ac": [ { "id": "NP_197384", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197384", "type": "external" } ], "gene_names_uniprotkb": "SPL7; ATSPL7; F17K4.80; F17K4_80", "gene_names_refseq": "ATSPL7; F17K4.80; F17K4_80; SPL7; SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7; squamosa promoter binding protein-like 7", "protein_names_uniprotkb": "Squamosa promoter-binding-like protein 7", "protein_names_refseq": "squamosa promoter binding protein-like 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18830)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10524240;11130714;14593172;15001351;19122104;22374396;24335506;25207797;25516599;26511915;27352843;27862469", "class_list": "", "function": "Transcription factor that participates in reprogramming global gene expression during copper deficiency in order to improve the metal uptake and prioritize its distribution to copper proteins of major importance (Probable). Binds directly to 5'-GTAC-3' motifs in the microRNA (miRNA) promoter of the stress-responsive miRNAs miR398b and miR398c to activate their transcription. During copper deficiency, activates the copper transporters COPT1 and COPT2, and the copper chaperone CCH, directly or indirectly via miRNAs. Required for the expression of the miRNAs miR397, miR408 and miR857 (PubMed:19122104). Acts coordinately with HY5 to regulate miR408 and its target genes in response to changes in light and copper conditions (PubMed:25516599). Activates miR857 and its target genes in response to low copper conditions (PubMed:26511915). Involved in cadmium stress response by regulating miR397a, miR398b, miR398c and miR857 (PubMed:27352843). Required for iron homeostasis during copper deficiency (PubMed:22374396)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZV0;Q9S723;Q9SMY1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006878 intracellular copper ion homeostasis;GO:0006355 regulation of DNA-templated transcription;GO:0048638 regulation of developmental growth;GO:0035874 cellular response to copper ion starvation", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8S9G8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7S8-1", "uniprot_id": [ { "id": "RH3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7S8", "type": "external" } ], "mass": 81156.0, "length": 748, "protein_name": "DEAD-box ATP-dependent RNA helicase 3, chloroplastic", "gene_name": "EMB1138; RH3", "organism": "Arabidopsis", "refseq_name": "DEAD box RNA helicase (RH3)", "refseq_ac": [ { "id": "NP_001031943", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031943", "type": "external" } ], "gene_names_uniprotkb": "EMB1138; RH3; AtRH3; EMB1138; F21E10.1; RH3; T7I7.6; emb1138; embryo defective 1138", "gene_names_refseq": "AtRH3; RH3; emb1138; embryo defective 1138", "protein_names_uniprotkb": "DEAD-box ATP-dependent RNA helicase 3, chloroplastic; 3.6.4.13; AtRH03; AtRH3; Protein EMBRYO DEFECTIVE 1138", "protein_names_refseq": "DEAD box RNA helicase (RH3)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26742)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "11130714;14593172;15266054;17168887;18431481;19376835;20466843;21768351;22576849;23111157;23227895;23660473;23776212;24265739;25043599;25561503;26187819;27862469;30833711;31334862;40000658;9862990", "class_list": "", "function": "Nuclear genome-encoded factor involved in ribosome biogenesis in chloroplasts (PubMed:22576849, PubMed:23227895, PubMed:25043599). Binds specific group II introns in chloroplasts and facilitates their splicing. Is required for rRNA maturation in plastids and may contribute to the assembly of the large (50S) ribosomal subunit (PubMed:22576849). Required for normal development of chloroplasts (PubMed:22576849, PubMed:23227895, PubMed:25043599). Required for the expression of transcripts encoding plastid-localized enzymes involved in abscisic acid (ABA) biosynthesis. Required for maintenance of ABA levels and response to salt stress (PubMed:23227895). Possesses RNA chaperone activity for proper splicing of introns in chloroplasts. Essential for chloroplast function and abiotic stress responses (PubMed:25043599). Promotes the loading of small RNAs (sRNAs) to AGO2 at the endoplasmic reticulum (ER)-chloroplast membrane contact sites (MCSs) (PubMed:40000658). Enhances antiviral responses by targeting viral-derived small RNA (e.g. vsiRNAs of turnip yellow mosaic virus, TYMV) to AGO2, thus triggering viral RNA silencing (PubMed:40000658)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65255;Q0WMJ9;Q8LPE9;Q8RUW1;Q9SB96", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0051607 defense response to virus;GO:0042254 ribosome biogenesis;GO:0009651 response to salt stress;GO:0042742 defense response to bacterium;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q8L7S8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX28-1", "uniprot_id": [ { "id": "HDA5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX28", "type": "external" } ], "mass": 72723.0, "length": 660, "protein_name": "Histone deacetylase 5", "gene_name": "HDA05; HDA5", "organism": "Arabidopsis", "refseq_name": "histone deacetylase 5", "refseq_ac": [ { "id": "NP_200914", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200914", "type": "external" } ], "gene_names_uniprotkb": "HDA05; HDA5; ATHDA5; HDA5; MAF19.7; MAF19_7; histone deacetylase 5", "gene_names_refseq": "ATHDA5; HDA05; HDA5; MAF19.7; MAF19_7; histone deacetylase 5", "protein_names_uniprotkb": "Histone deacetylase 5; 3.5.1.98", "protein_names_refseq": "histone deacetylase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G61060)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;12466527;14593172;16176989;22223895;22363501;23776212;25922987;27862469;9405937", "class_list": "", "function": "Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (Probable). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (Probable). Histone deacetylases act via the formation of large multiprotein complexes (PubMed:25922987). Involved in the regulation of flowering time by repressing FLC and AGL27/MAF1 expression (PubMed:25922987). Forms a histone deacetylase complex with HDA6, FLD and MSI4/FVE that represses FLC gene expression to control flowering time (PubMed:25922987). Unlike its tandem duplication HDA18, HDA5 does not seem to be required for the cellular patterning in the root epidermis (PubMed:16176989)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FNQ7;Q9FNQ8", "ec_number_list": [ { "id": "3.5.1.98", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.98", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004407 histone deacetylase activity;GO:0141221 histone deacetylase activity, hydrolytic mechanism;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045814 negative regulation of gene expression, epigenetic;GO:0040029 epigenetic regulation of gene expression;GO:0009908 flower development;GO:0048510 regulation of timing of transition from vegetative to reproductive phase", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8RX28-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXK8-1", "uniprot_id": [ { "id": "SYIM_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXK8", "type": "external" } ], "mass": 123008.0, "length": 1093, "protein_name": "Isoleucine--tRNA ligase, chloroplastic/mitochondrial", "gene_name": "OVA2", "organism": "Arabidopsis", "refseq_name": "tRNA synthetase class I (I, L, M and V) family protein", "refseq_ac": [ { "id": "NP_001032042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032042", "type": "external" } ], "gene_names_uniprotkb": "OVA2; K19E20.18; K19E20_18; ovule abortion 2", "gene_names_refseq": "K19E20.18; K19E20_18; OVA2; ovule abortion 2", "protein_names_uniprotkb": "Isoleucine--tRNA ligase, chloroplastic/mitochondrial; 6.1.1.5; IleRS; Isoleucyl-tRNA synthetase; Protein OVULE ABORTION 2", "protein_names_refseq": "tRNA synthetase class I (I, L, M and V) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49030)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10470850;11130714;14593172;16251277;16297076;19423640;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DF95;F4K4Q4;Q9FI67", "ec_number_list": [ { "id": "6.1.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.5", "type": "external" } ], "go_molecular_function": "GO:0002161 aminoacyl-tRNA deacylase activity;GO:0004822 isoleucine-tRNA ligase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0000049 tRNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0005576 extracellular region", "go_biological_process": "GO:0006428 isoleucyl-tRNA aminoacylation;GO:0032543 mitochondrial translation;GO:0048481 plant ovule development;GO:0009791 post-embryonic development;GO:0048608 reproductive structure development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8RXK8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZU2-1", "uniprot_id": [ { "id": "SY132_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZU2", "type": "external" } ], "mass": 34225.0, "length": 304, "protein_name": "Syntaxin-132", "gene_name": "SYP132", "organism": "Arabidopsis", "refseq_name": "syntaxin of plants 132", "refseq_ac": [ { "id": "NP_001332203", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332203", "type": "external" } ], "gene_names_uniprotkb": "SYP132; ATSYP132; T22D6.20; T22D6_20; syntaxin of plants 132", "gene_names_refseq": "ATSYP132; SYP132; T22D6.20; T22D6_20; syntaxin of plants 132", "protein_names_uniprotkb": "Syntaxin-132; AtSYP132", "protein_names_refseq": "syntaxin of plants 132", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08080)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130714;14593172;15308754;17317660;19098073;19376835;20466843;20733066;21768351;23172892;23572148;23776212;24642714;27419465;27862469;28011693;29396117;30926657", "class_list": "", "function": "Vesicle trafficking protein that functions in the secretory pathway (Probable). Acts in coordination with SYP123 to mediate tip-focused membrane trafficking for root hair tip growth (PubMed:24642714). Functions in root hair elongation by forming SNARE complexes with VAMP721,VAMP722 or VAMP724 (PubMed:24642714). Involved in cytokinesis (PubMed:29396117). Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division (PubMed:29396117). Required for secretory trafficking to the plasma membrane during interphase (PubMed:29396117). Involved in the regulation of density of the H(+) ATPase proteins at the plasma membrane of root and shoot in epidermal cells (PubMed:30926657). Modulation of SYP132 expression by auxin affects clathrin-sensitive H(+) ATPase traffic from the plasma membrane, and influences apoplastic acidification and plant growth (PubMed:30926657)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LEZ8", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0005802 trans-Golgi network;GO:0031201 SNARE complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006897 endocytosis;GO:0051301 cell division;GO:0061025 membrane fusion;GO:0006887 exocytosis", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8VZU2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDF9-1", "uniprot_id": [ { "id": "HMGB7_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDF9", "type": "external" } ], "mass": 26982.0, "length": 241, "protein_name": "High mobility group B protein 7", "gene_name": "HMGB6; HMGB7", "organism": "Arabidopsis", "refseq_name": "high-mobility group box 6", "refseq_ac": [ { "id": "NP_568431", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568431", "type": "external" } ], "gene_names_uniprotkb": "HMGB6; HMGB7; HMGB6; K19M13.4; K19M13_4; NFD7; high-mobility group box 6", "gene_names_refseq": "HMGB6; K19M13.4; K19M13_4; high-mobility group box 6", "protein_names_uniprotkb": "High mobility group B protein 7; Nucleosome/chromatin assembly factor group D 07; Nucleosome/chromatin assembly factor group D 7; Protein NUCLEAR FUSION DEFECTIVE 7", "protein_names_refseq": "high-mobility group box 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23420)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10470850;11130714;11910074;14756567;16698901;17316617;20123078;20466843;23572148;23660473;23776212;25561503;27862469", "class_list": "", "function": "Binds preferentially double-stranded supercoiled DNA (PubMed:14756567). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed:16698901)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FHL6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000741 karyogamy;GO:0010197 polar nucleus fusion", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8LDF9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1E2-1", "uniprot_id": [ { "id": "MDHNP_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1E2", "type": "external" } ], "mass": 48316.0, "length": 443, "protein_name": "Malate dehydrogenase [NADP], chloroplastic", "gene_name": "NADP-MDH", "organism": "Arabidopsis", "refseq_name": "lactate/malate dehydrogenase family protein", "refseq_ac": [ { "id": "NP_568875", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568875", "type": "external" } ], "gene_names_uniprotkb": "NADP-MDH; MCK7.20; MCK7_20", "gene_names_refseq": "MCK7.20; MCK7_20; NADP-MDH; NADP-dependent Malate Dehydrogenase", "protein_names_uniprotkb": "Malate dehydrogenase [NADP], chloroplastic; 1.1.1.82; NADP-MDH", "protein_names_refseq": "lactate/malate dehydrogenase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58330)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10718197;11130714;14593172;17925997;22140244;24591715;27862469", "class_list": "", "function": "The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells (Probable). Plays an essential role in the regulation of catalase activity and the accumulation of a hydrogen peroxide-dependent signal by transmitting the redox state of the chloroplast to other cell compartments (PubMed:24591715)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCQ9;Q8VXZ3;Q9LVL7", "ec_number_list": [ { "id": "1.1.1.37", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.37", "type": "external" }, { "id": "1.1.1.82", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.82", "type": "external" } ], "go_molecular_function": "GO:0030060 L-malate dehydrogenase (NAD+) activity;GO:0046554 L-malate dehydrogenase (NADP+) activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0051775 response to redox state;GO:0006107 oxaloacetate metabolic process;GO:0019674 NAD+ metabolic process;GO:0006108 malate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8H1E2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZB2-1", "uniprot_id": [ { "id": "HACD_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZB2", "type": "external" } ], "mass": 25327.0, "length": 221, "protein_name": "Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2", "gene_name": "PAS2", "organism": "Arabidopsis", "refseq_name": "Protein-tyrosine phosphatase-like, PTPLA", "refseq_ac": [ { "id": "NP_001078566", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078566", "type": "external" } ], "gene_names_uniprotkb": "PAS2; F12B17.170; F12B17_170; PASTICCINO 2; PEPINO; PEP", "gene_names_refseq": "F12B17.170; F12B17_170; PAS2; PASTICCINO 2; PEPINO; PEP", "protein_names_uniprotkb": "Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2; 3-hydroxyacyl-CoA dehydratase PASTICCINO 2; 4.2.1.134; AtPAS2; HACD; HCD; PEP; Protein PEPINO; Protein tyrosine phosphatase-like protein", "protein_names_refseq": "Protein-tyrosine phosphatase-like, PTPLA", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10480)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;12459923;12472687;12857804;14593172;16698944;18799749;20145257;21896643;27862469", "class_list": "", "function": "Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators., [UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQH5;Q9LXA0", "ec_number_list": [ { "id": "4.2.1.134", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.134", "type": "external" } ], "go_molecular_function": "GO:0018812 3-hydroxyacyl-CoA dehydratase activity;GO:0102158 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0030154 cell differentiation;GO:0030148 sphingolipid biosynthetic process;GO:0030497 fatty acid elongation;GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation;GO:0051302 regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8VZB2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L9V6-1", "uniprot_id": [ { "id": "DOF11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L9V6", "type": "external" } ], "mass": 35589.0, "length": 331, "protein_name": "Dof zinc finger protein DOF1.1", "gene_name": "DOF1.1; OBP2", "organism": "Arabidopsis", "refseq_name": "Dof-type zinc finger DNA-binding family protein", "refseq_ac": [ { "id": "NP_001030988", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030988", "type": "external" } ], "gene_names_uniprotkb": "DOF1.1; OBP2; F24B9.30; F24B9_30; OBP2; UAS-TAGGED ROOT PATTERNING3; URP3; ZINC FINGER PROTEIN OBP2", "gene_names_refseq": "F24B9.30; F24B9_30; OBP2; UAS-TAGGED ROOT PATTERNING3; URP3; ZINC FINGER PROTEIN OBP2", "protein_names_uniprotkb": "Dof zinc finger protein DOF1.1; AtDOF1.1; OBF-binding protein 2; Protein PHLOEM EARLY DOF OBP2; Protein UAS-TAGGED ROOT PATTERNING 3", "protein_names_refseq": "Dof-type zinc finger DNA-binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07640)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10758484;11130712;12475498;14593172;16740150;23057675;23328941;27862469;30626969", "class_list": "", "function": "Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence., [UniProtKB, UniProtKB]; Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements (By similarity). Involved in the regulation of root development (PubMed:23057675). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). Element of a regulatory network controlling indole glucosinolates (IGS) biosynthesis, probably by inducing the expression of accurate genes (e.g. CYP83B1). Promotes apical dominance (PubMed:16740150)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4A2;Q9LQN7;Q9XGU6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009611 response to wounding;GO:0003002 regionalization;GO:0009625 response to insect", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L9V6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXL3-1", "uniprot_id": [ { "id": "SPL8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXL3", "type": "external" } ], "mass": 36827.0, "length": 333, "protein_name": "Squamosa promoter-binding-like protein 8", "gene_name": "SPL8", "organism": "Arabidopsis", "refseq_name": "squamosa promoter binding protein-like 8", "refseq_ac": [ { "id": "NP_683267", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683267", "type": "external" } ], "gene_names_uniprotkb": "SPL8; T7I23.32", "gene_names_refseq": "SPL8; squamosa promoter binding protein-like 8", "protein_names_uniprotkb": "Squamosa promoter-binding-like protein 8", "protein_names_refseq": "squamosa promoter binding protein-like 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02065)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10524240;11130712;11910074;12671094;16095614;17093870;25561503;27862469;28154133", "class_list": "", "function": "Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'. Binds specifically to the 5'-GTAC-3' core sequence. Involved in development and floral organogenesis. Required for ovule differentiation, pollen production, filament elongation, seed formation and siliques elongation. Also seems to play a role in the formation of trichomes on sepals. May positively modulate gibberellin (GA) signaling in flower., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9S849", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0001216 DNA-binding transcription activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0009554 megasporogenesis;GO:0009555 pollen development;GO:0009556 microsporogenesis", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8GXL3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JE8-1", "uniprot_id": [ { "id": "ZDP_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JE8", "type": "external" } ], "mass": 77387.0, "length": 694, "protein_name": "Polynucleotide 3'-phosphatase ZDP", "gene_name": "ZDP", "organism": "Arabidopsis", "refseq_name": "phosphoesterase", "refseq_ac": [ { "id": "NP_188107", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188107", "type": "external" } ], "gene_names_uniprotkb": "ZDP; K15M2.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Polynucleotide 3'-phosphatase ZDP; 3.1.3.32; DNA nick sensor protein", "protein_names_refseq": "phosphoesterase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14890)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10907853;11948185;14593172;19376835;20466843;21768351;22074104;22325353;23316050;23328941;23660473;23776212;25561503;25569774;27862469;30833711", "class_list": "", "function": "Nick-sensing 3'-phosphoesterase involved in a base excision repair pathway required for active DNA demethylation. The N-terminal DNA-binding domain binds specifically to gap sites and sharply bends the target DNA. Lacks 5'-kinase activity but is capable of 3'-phosphoglycolate end processing. Inactive on 3'-alpha,beta-unsaturated aldehyde (3'-dRP). Protects partially genes from transcriptional silencing by preventing promoter DNA hypermethylation., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IXD6;Q8LL89;Q9LKB5", "ec_number_list": [ { "id": "3.1.3.32", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.32", "type": "external" } ], "go_molecular_function": "GO:0046404 ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity;GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0046403 polynucleotide 3'-phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q84JE8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JL3-1", "uniprot_id": [ { "id": "SINA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JL3", "type": "external" } ], "mass": 36947.0, "length": 326, "protein_name": "E3 ubiquitin-protein ligase SINAT3", "gene_name": "SINAT3", "organism": "Arabidopsis", "refseq_name": "Protein with RING/U-box and TRAF-like domain", "refseq_ac": [ { "id": "NP_567118", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567118", "type": "external" } ], "gene_names_uniprotkb": "SINAT3; F15G16.180", "gene_names_refseq": "F21F14.2", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase SINAT3; 2.3.2.27; RING-type E3 ubiquitin transferase SINAT3; Seven in absentia homolog 3", "protein_names_refseq": "Protein with RING/U-box and TRAF-like domain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G61790)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;22122664;24350984;27862469;32753431;32786047", "class_list": "", "function": "E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:32786047). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:32786047). It probably triggers the ubiquitin-mediated degradation of different substrates (PubMed:32786047). Modulates directly the ubiquitination and proteasomal-dependent degradation of FREE1, a component of the ESCRT-I complex (PubMed:32753431, PubMed:32786047). Modulates directly the ubiquitination and proteasomal-dependent degradation of ELC/VPS23A, a component of the ESCRT-I complex (PubMed:32753431)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFQ3;Q9M359", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0012505 endomembrane system;GO:0005776 autophagosome;GO:0005771 multivesicular body", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84JL3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JQ4-1", "uniprot_id": [ { "id": "PRK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JQ4", "type": "external" } ], "mass": 72522.0, "length": 647, "protein_name": "Pollen receptor-like kinase 2", "gene_name": "PRK2", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": [ { "id": "NP_178721", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178721", "type": "external" } ], "gene_names_uniprotkb": "PRK2; PRK2A; PRKC; T4E14.15", "gene_names_refseq": "ATPRK2A; AtPRK2; PRK2A; PRK2; T4E14.15; T4E14_15; pollen receptor like kinase 2", "protein_names_uniprotkb": "Pollen receptor-like kinase 2; 2.7.11.1; AtPRK2", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G07040)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;12139002;14593172;18000057;20064227;23024212;24136420;27862469", "class_list": "", "function": "Receptor-like kinase involved in the control of pollen germination and pollen tube polar growth (PubMed:23024212, PubMed:24136420). Phosphorylates ROPGEF1 in its C-terminal region, releasing its auto-inhibition, and thereby activating the ROP1 signaling pathway (PubMed:23024212). May act as a scaffolding protein, recruiting ROPGEF12 to the plasma membrane by binding to its C-terminal domain (PubMed:18000057). Phosphorylates ROPGEF12, releasing its auto-inhibition (PubMed:18000057)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZVV7", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0090406 pollen tube", "go_biological_process": "GO:0009846 pollen germination;GO:0009860 pollen tube growth;GO:0080092 regulation of pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84JQ4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JS6-1", "uniprot_id": [ { "id": "KNAT6_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JS6", "type": "external" } ], "mass": 36934.0, "length": 327, "protein_name": "Homeobox protein knotted-1-like 6", "gene_name": "KNAT6", "organism": "Arabidopsis", "refseq_name": "homeobox protein knotted-1-like 6", "refseq_ac": [ { "id": "NP_173752", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173752", "type": "external" } ], "gene_names_uniprotkb": "KNAT6; F26F24.25; F28C11.2", "gene_names_refseq": "F26F24.32; F26F24_32; KNAT6L; KNAT6S; KNAT6; KNOTTED1-like homeobox gene 6", "protein_names_uniprotkb": "Homeobox protein knotted-1-like 6; Protein KNAT6", "protein_names_refseq": "homeobox protein knotted-1-like 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G23380)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11311158;14593172;15019989;15781858;16798887;20466843;27862469", "class_list": "", "function": "Plays a role in meristem function. Contributes to the shoot apical meristem (SAM) maintenance and organ separation by controlling boundary establishment in embryo in a CUC1, CUC2 and STM-dependent manner. Involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q948K0;Q9LQD4;Q9LR21", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0010073 meristem maintenance", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84JS6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JU4-1", "uniprot_id": [ { "id": "IBR5_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JU4", "type": "external" } ], "mass": 28690.0, "length": 257, "protein_name": "Protein-tyrosine-phosphatase IBR5", "gene_name": "IBR5", "organism": "Arabidopsis", "refseq_name": "indole-3-butyric acid response 5", "refseq_ac": [ { "id": "NP_178534", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178534", "type": "external" } ], "gene_names_uniprotkb": "IBR5; SKIP33; T1O3.4", "gene_names_refseq": "DSPTP1E; DUAL SPECIFICITY PROTEIN PHOSPHATASE 1E; IBR5; T1O3.4; T1O3_4; indole-3-butyric acid response 5", "protein_names_uniprotkb": "Protein-tyrosine-phosphatase IBR5; 3.1.3.48; Protein IBA RESPONSE 5; Protein INDOLE-3-BUTYRIC ACID RESPONSE 5; SKP1-interacting partner 33", "protein_names_refseq": "indole-3-butyric acid response 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G04550)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;12795696;14593172;14630970;18423007;18832358;19000167;25561503;27862469;27923039", "class_list": "", "function": "Required for the transduction of auxin and abscisic acid (ABA) signaling pathways. Dephosphorylates and inactivates the MAP kinase MPK12., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q3EC68;Q9SJB6", "ec_number_list": [ { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "1.20.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.1", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" } ], "go_molecular_function": "GO:0033549 MAP kinase phosphatase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0046620 regulation of organ growth;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q84JU4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JW1-1", "uniprot_id": [ { "id": "PX11E_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JW1", "type": "external" } ], "mass": 25512.0, "length": 231, "protein_name": "Peroxisomal membrane protein 11E", "gene_name": "PEX11E", "organism": "Arabidopsis", "refseq_name": "peroxin 11E", "refseq_ac": [ { "id": "NP_001078322", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078322", "type": "external" } ], "gene_names_uniprotkb": "PEX11E; PEX11-2; T27I15.160", "gene_names_refseq": "PEX11E; peroxin 11E", "protein_names_uniprotkb": "Peroxisomal membrane protein 11E; AtPEX11e; Peroxin-11E", "protein_names_refseq": "peroxin 11E", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G61070)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;16636080;17220199;18539750;20179140;27862469", "class_list": "", "function": "Involved in peroxisomal proliferation. Promotes peroxisomal duplication, aggregation or elongation without fission., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5QT11;Q9LEW9", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005778 peroxisomal membrane;GO:0005829 cytosol", "go_biological_process": "GO:0016559 peroxisome fission;GO:0007031 peroxisome organization;GO:0007623 circadian rhythm;GO:0044375 regulation of peroxisome size", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84JW1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84JZ6-1", "uniprot_id": [ { "id": "MORF3_ARATH", "url": "https://www.uniprot.org/uniprot/Q84JZ6", "type": "external" } ], "mass": 27558.0, "length": 244, "protein_name": "Multiple organellar RNA editing factor 3, mitochondrial", "gene_name": "MORF3", "organism": "Arabidopsis", "refseq_name": "plastid developmental protein DAG", "refseq_ac": [ { "id": "NP_187335", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187335", "type": "external" } ], "gene_names_uniprotkb": "MORF3; F3E22.7; RIP3", "gene_names_refseq": "MORF3; multiple organellar RNA editing factor 3", "protein_names_uniprotkb": "Multiple organellar RNA editing factor 3, mitochondrial; RNA editing-interacting protein 3", "protein_names_refseq": "plastid developmental protein DAG", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06790)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;22411807;23111157;23818871;25583991;27862469", "class_list": "", "function": "Involved in organellar RNA editing. Required for the processing of RNA editing sites in mitochondria., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M7Y5", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0050897 cobalt ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006397 mRNA processing;GO:0016554 cytidine to uridine editing;GO:0080156 mitochondrial mRNA modification;GO:1900864 mitochondrial RNA modification", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84JZ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84K00-1", "uniprot_id": [ { "id": "NAC78_ARATH", "url": "https://www.uniprot.org/uniprot/Q84K00", "type": "external" } ], "mass": 63511.0, "length": 567, "protein_name": "NAC domain-containing protein 78", "gene_name": "NAC078", "organism": "Arabidopsis", "refseq_name": "NAC domain containing protein 2", "refseq_ac": [ { "id": "NP_196061", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196061", "type": "external" } ], "gene_names_uniprotkb": "NAC078; NAC2; NTL11; T32M21.10", "gene_names_refseq": "Arabidopsis NAC domain containing protein 78; NAC domain containing protein 2; NAC2; T19N18.11; anac078", "protein_names_uniprotkb": "NAC domain-containing protein 78; ANAC078; Protein NTM1-like 11", "protein_names_refseq": "NAC domain containing protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04410)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;12618409;14593172;15029955;17158162;19887540;21889048;27862469", "class_list": "", "function": "Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcription activator associated with the induction of genes related to flavonoid biosynthesis and required for the accumulation of anthocyanins in response to high light stress (PubMed:19887540). Plays a role in the regulation of 20S and 26S proteasomes in response to high light stress (PubMed:21889048)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q84UG1;Q9LZ84;Q9SNW1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009644 response to high light intensity;GO:0009962 regulation of flavonoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84K00-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84K52-1", "uniprot_id": [ { "id": "DOF47_ARATH", "url": "https://www.uniprot.org/uniprot/Q84K52", "type": "external" } ], "mass": 27394.0, "length": 246, "protein_name": "Dof zinc finger protein DOF4.7", "gene_name": "DOF4.7", "organism": "Arabidopsis", "refseq_name": "DNA binding with one finger 4.7", "refseq_ac": [ { "id": "NP_195513", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195513", "type": "external" } ], "gene_names_uniprotkb": "DOF4.7; F20D10.120", "gene_names_refseq": "DNA binding with one finger 4.7; DOF4.7; F20D10.120; F20D10_120", "protein_names_uniprotkb": "Dof zinc finger protein DOF4.7; AtDOF4.7; Protein DNA BINDING WITH ONE FINGER 4.7", "protein_names_refseq": "DNA binding with one finger 4.7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38000)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;12475498;14593172;20466844;27862469", "class_list": "", "function": "Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Involved in the negative regulation of floral organ abscission by binding to the typical DOF 5'-AAAG-3' sequences in the promoter of ADPG2/PGAZAT, and by down-regulating its expression. ADPG2/PGAZAT is an abscission-related and cell wall hydrolyzing polygalacturonase. May act through the interaction with ZFP2, an abscission-related transcription factor., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZK0", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0010227 floral organ abscission", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q84K52-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84KJ5-1", "uniprot_id": [ { "id": "CRYD_ARATH", "url": "https://www.uniprot.org/uniprot/Q84KJ5", "type": "external" } ], "mass": 64983.0, "length": 569, "protein_name": "Cryptochrome DASH, chloroplastic/mitochondrial", "gene_name": "CRYD", "organism": "Arabidopsis", "refseq_name": "cryptochrome 3", "refseq_ac": [ { "id": "NP_568461", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568461", "type": "external" } ], "gene_names_uniprotkb": "CRYD; CRY3; F6A4.60", "gene_names_refseq": "CRY3; F6A4.60; F6A4_60; cryptochrome 3", "protein_names_uniprotkb": "Cryptochrome DASH, chloroplastic/mitochondrial; Cryptochrome-3", "protein_names_refseq": "cryptochrome 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G24850)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;12535521;12834405;14593172;17062752;17101984;17188299;27862469", "class_list": "", "function": "May have a photoreceptor function. Binds ss- and ds-DNA in a sequence non-specific manner. Has a photolyase activity specific for cyclobutane pyrimidine dimers in ssDNA., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4KIJ6;Q8VZD8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0071949 FAD binding;GO:0010181 FMN binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0000719 photoreactive repair", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84KJ5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84LH3-1", "uniprot_id": [ { "id": "WEX_ARATH", "url": "https://www.uniprot.org/uniprot/Q84LH3", "type": "external" } ], "mass": 32090.0, "length": 288, "protein_name": "3'-5' exonuclease", "gene_name": "WEX", "organism": "Arabidopsis", "refseq_name": "Werner syndrome-like exonuclease", "refseq_ac": [ { "id": "NP_193123", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193123", "type": "external" } ], "gene_names_uniprotkb": "WEX; F18A5.260; WRNEXO", "gene_names_refseq": "ATWEX; ATWRNEXO; EXONUCLEASE; F18A5.260; F18A5_260; WEX; WRNEXO; Werner syndrome-like exonuclease", "protein_names_uniprotkb": "3'-5' exonuclease; 3.1.-.-; Werner Syndrome-like exonuclease", "protein_names_refseq": "Werner syndrome-like exonuclease", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13870)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11058127;12887585;12937173;14871304;16396834;27862469", "class_list": "", "function": "Exonuclease that digests recessed strands of DNA duplexes in the 3' to 5' direction but hardly single-stranded DNA or blunt-ended duplexes. Also able to digest 3'-protruding strands and 3'-recessed strand termini of duplexes containing mismatched bases., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6QPM3;Q9FT68;Q9SVM6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046872 metal ion binding;GO:0008408 3'-5' exonuclease activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006139 nucleobase-containing compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84LH3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84LH8-1", "uniprot_id": [ { "id": "PIF5_ARATH", "url": "https://www.uniprot.org/uniprot/Q84LH8", "type": "external" } ], "mass": 49302.0, "length": 444, "protein_name": "Transcription factor PIF5", "gene_name": "PIF5", "organism": "Arabidopsis", "refseq_name": "phytochrome interacting factor 3-like 6", "refseq_ac": [ { "id": "NP_001030889", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030889", "type": "external" } ], "gene_names_uniprotkb": "PIF5; BHLH65; EN103; F17J16.110; PIL6", "gene_names_refseq": "PHYTOCHROME-INTERACTING FACTOR 5; PIF5; PIL6; phytochrome interacting factor 3-like 6", "protein_names_uniprotkb": "Transcription factor PIF5; AtbHLH65; Basic helix-loop-helix protein 65; Phytochrome interacting factor-like 6; Phytochrome-interacting factor 5; Transcription factor EN 103; bHLH 65; bHLH transcription factor bHLH065", "protein_names_refseq": "phytochrome interacting factor 3-like 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G59060)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130713;12679534;12826627;12897250;14593172;14600211;15356333;15486100;17589502;17827270;18047474;18065691;23708772;25561503;25944101;26704640;26724867;27862469", "class_list": "", "function": "Transcription factor acting negatively in the phytochrome B signaling pathway to promote the shade-avoidance response. Regulates PHYB abundance at the post-transcriptional level, possibly via the ubiquitin-proteasome pathway. Promotes ethylene activity in the dark. May regulate the expression of a subset of genes by binding to the G-box motif. Might be involved in the integration of light-signals to control both circadian and photomorphogenic processes. Activated by CRY1 and CRY2 in response to low blue light (LBL) by direct binding at chromatin on E-box variant 5'-CA[CT]GTG-3' to stimulate specific gene expression to adapt global physiology (e.g. hypocotyl elongation in low blue light) (PubMed:26724867)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RXG4;Q8S3D7;Q9LYT0", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0009585 red, far-red light phototransduction;GO:0009741 response to brassinosteroid;GO:0009693 ethylene biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q84LH8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84M92-1", "uniprot_id": [ { "id": "ARP4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84M92", "type": "external" } ], "mass": 48937.0, "length": 441, "protein_name": "Actin-related protein 4", "gene_name": "ARP4", "organism": "Arabidopsis", "refseq_name": "actin-related protein 4", "refseq_ac": [ { "id": "NP_564051", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564051", "type": "external" } ], "gene_names_uniprotkb": "ARP4; F15H18.8", "gene_names_refseq": "ARP4; ATARP4; F15H18.8; F15H18_8; actin-related protein 4", "protein_names_uniprotkb": "Actin-related protein 4", "protein_names_refseq": "actin-related protein 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18450)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11891255;12609034;14593172;15063870;15743449;20466843;23572148;23776212;27862469", "class_list": "", "function": "Involved in several developmental processes including organization of plant organs, flowering time, anther development, flower senescence and fertility, probably by regulating the chromatin structure., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAI7;Q8LKR2;Q9LPQ9", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0005200 structural constituent of cytoskeleton", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0016514 SWI/SNF complex;GO:0031011 Ino80 complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006325 chromatin organization;GO:0040029 epigenetic regulation of gene expression;GO:0048235 pollen sperm cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q84M92-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84MB5-1", "uniprot_id": [ { "id": "RBL11_ARATH", "url": "https://www.uniprot.org/uniprot/Q84MB5", "type": "external" } ], "mass": 31593.0, "length": 280, "protein_name": "Rhomboid-like protein 11, chloroplastic", "gene_name": "RBL11", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "RBL11; RBL9; T5I5", "gene_names_refseq": "", "protein_names_uniprotkb": "Rhomboid-like protein 11, chloroplastic; 3.4.21.-; AtRBL11", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 9, "publication_id_list": "11130714;14593172;16895613;17181860;17938163;18543065;22007993;22738221;27862469", "class_list": "", "function": "Rhomboid-type serine protease that catalyzes intramembrane proteolysis. May be involved in TIC22 processing during its import., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0019904 protein domain specific binding", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0080140 regulation of jasmonic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84MB5-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84MD8-1", "uniprot_id": [ { "id": "FHYRK_ARATH", "url": "https://www.uniprot.org/uniprot/Q84MD8", "type": "external" } ], "mass": 42110.0, "length": 379, "protein_name": "Bifunctional riboflavin kinase/FMN phosphatase", "gene_name": "FHY", "organism": "Arabidopsis", "refseq_name": "riboflavin kinase/FMN hydrolase", "refseq_ac": [ { "id": "NP_193878", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193878", "type": "external" } ], "gene_names_uniprotkb": "FHY; F18E5.90; FMN", "gene_names_refseq": "ATFMN/FHY; F18E5.90; F18E5_90; FMN/FHY; riboflavin kinase/FMN hydrolase", "protein_names_uniprotkb": "Bifunctional riboflavin kinase/FMN phosphatase; FMN phosphohydrolase; Flavokinase", "protein_names_refseq": "riboflavin kinase/FMN hydrolase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21470)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;16183635;22002057;22223895;24924143;27862469", "class_list": "", "function": "Bifunctional enzyme that catalyzes the hydrolysis of flavin-mononucleotide (FMN) to riboflavin (vitamin B2) and the phosphorylation of riboflavin to form (FMN) coenzyme., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65412", "ec_number_list": [ { "id": "2.7.1.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.26", "type": "external" }, { "id": "3.1.3.102", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.102", "type": "external" }, { "id": "3.1.3.104", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.104", "type": "external" } ], "go_molecular_function": "GO:0003919 FMN adenylyltransferase activity;GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0008531 riboflavin kinase activity;GO:0090711 FMN hydrolase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0009231 riboflavin biosynthetic process;GO:0009398 FMN biosynthetic process;GO:0006771 riboflavin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84MD8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84ME1-1", "uniprot_id": [ { "id": "LUL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q84ME1", "type": "external" } ], "mass": 42309.0, "length": 378, "protein_name": "Probable E3 ubiquitin-protein ligase LUL3", "gene_name": "LUL3", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_197409", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197409", "type": "external" } ], "gene_names_uniprotkb": "LUL3; RF398; T16G12.120", "gene_names_refseq": "AtVBP1; LOG2-LIKE UBIQUITIN LIGASE3; LUL3; T16G12.120; T16G12_120; VBP1; VrUBC1 Binding Partner 1", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase LUL3; 2.3.2.27; Probable RING-type E3 ubiquitin transferase LUL3; Protein LOG2-LIKE UBIQUITIN LIGASE 3; RING finger protein 398", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19080)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;11983057;14593172;15644464;22291198;27862469", "class_list": "", "function": "Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (in vitro)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8L7V9", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84ME1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84P23-1", "uniprot_id": [ { "id": "4CLL9_ARATH", "url": "https://www.uniprot.org/uniprot/Q84P23", "type": "external" } ], "mass": 61278.0, "length": 562, "protein_name": "4-coumarate--CoA ligase-like 9", "gene_name": "4CLL9; AITR6", "organism": "Arabidopsis", "refseq_name": "AMP-dependent synthetase and ligase family protein", "refseq_ac": [ { "id": "NP_201143", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201143", "type": "external" } ], "gene_names_uniprotkb": "4CLL9; AITR6; K9H21.11; K9H21.8; K9H21_8", "gene_names_refseq": "K9H21.11; K9H21_11", "protein_names_uniprotkb": "4-coumarate--CoA ligase-like 9; 4-coumarate--CoA ligase isoform 4; 6.2.1.-; At4CL4", "protein_names_refseq": "AMP-dependent synthetase and ligase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63350); (ath:AT5G63380)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "10718197;11130714;12805634;12819348;14593172;15677481;18267944;22074104;27862469;9501997", "class_list": "", "function": "Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors (PubMed:15677481, PubMed:18267944). Converts 12-oxo-phytodienoic acid (OPDA) into OPDA-CoA (PubMed:15677481, PubMed:18267944). Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioester (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGW4", "ec_number_list": [ { "id": "6.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.-", "type": "external" }, { "id": "6.2.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.12", "type": "external" }, { "id": "6.2.1.27", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.27", "type": "external" }, { "id": "6.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0102391 decanoate-CoA ligase activity;GO:0004321 fatty-acyl-CoA synthase activity;GO:0016405 CoA-ligase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome", "go_biological_process": "GO:0031408 oxylipin biosynthetic process;GO:0009695 jasmonic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q84P23-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84P24-1", "uniprot_id": [ { "id": "4CLL6_ARATH", "url": "https://www.uniprot.org/uniprot/Q84P24", "type": "external" } ], "mass": 61957.0, "length": 566, "protein_name": "4-coumarate--CoA ligase-like 6", "gene_name": "4CLL6", "organism": "Arabidopsis", "refseq_name": "AMP-dependent synthetase and ligase family protein", "refseq_ac": [ { "id": "NP_193636", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193636", "type": "external" } ], "gene_names_uniprotkb": "4CLL6; F13C5.180", "gene_names_refseq": "F13C5.180; F13C5_180", "protein_names_uniprotkb": "4-coumarate--CoA ligase-like 6; 4-coumarate--CoA ligase isoform 7; 4-coumarate--CoA ligase; 4-hydroxybenzoate--CoA ligase; 6.2.1.-; 6.2.1.12; 6.2.1.27; At4CL7", "protein_names_refseq": "AMP-dependent synthetase and ligase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19010)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11910074;12805634;12819348;14593172;18267944;20466843;24838974;27862469", "class_list": "", "function": "Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors (PubMed:18267944). Acts as a carboxylate--CoA ligase that can use preferentially p-coumarate, ferulate and caffeate as substrates and, with a lower efficiency, (E)-cinnamate and 4-hydroxybenzoate as substrates (PubMed:24838974). Involved in the biosynthesis of ubiquinone from phenylalanine by activating the propyl side chain of 4-coumarate, and possibly trans-cinnamate and 4-hydroxybenzoate, for subsequent beta-oxidative shortening and the formation of the benzenoid moiety of ubiquinone (PubMed:24838974). Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioester (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49414;Q8GYV8", "ec_number_list": [ { "id": "6.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.-", "type": "external" }, { "id": "6.2.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.12", "type": "external" }, { "id": "6.2.1.34", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.34", "type": "external" }, { "id": "6.2.1.27", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.27", "type": "external" }, { "id": "6.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016405 CoA-ligase activity;GO:0016207 4-coumarate-CoA ligase activity;GO:0106286 (E)-caffeate-CoA ligase activity;GO:0018859 4-hydroxybenzoate-CoA ligase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0009507 chloroplast", "go_biological_process": "GO:0006744 ubiquinone biosynthetic process;GO:0009698 phenylpropanoid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84P24-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TE9-1", "uniprot_id": [ { "id": "DOF53_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TE9", "type": "external" } ], "mass": 28201.0, "length": 257, "protein_name": "Dof zinc finger protein DOF5.3", "gene_name": "DOF5.3", "organism": "Arabidopsis", "refseq_name": "TARGET OF MONOPTEROS 6", "refseq_ac": [ { "id": "NP_568920", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568920", "type": "external" } ], "gene_names_uniprotkb": "DOF5.3; F15L12.9; TMO6", "gene_names_refseq": "F15L12.10; F15L12_10; TARGET OF MONOPTEROS 6; TMO6", "protein_names_uniprotkb": "Dof zinc finger protein DOF5.3; AtDOF5.3; Protein PHLOEM EARLY DOF TMO6; Protein TARGET OF MONOPTEROS 6; Protein TARGET OF MP 6", "protein_names_refseq": "TARGET OF MONOPTEROS 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60200)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "12475498;14593172;20220754;20563990;27862469;30626969", "class_list": "", "function": "Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WRV9;Q8LDE1;Q9LSS6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010087 phloem or xylem histogenesis;GO:0048364 root development;GO:0090057 root radial pattern formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84TE9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TG3-1", "uniprot_id": [ { "id": "PUB23_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TG3", "type": "external" } ], "mass": 45823.0, "length": 411, "protein_name": "E3 ubiquitin-protein ligase PUB23", "gene_name": "PUB23", "organism": "Arabidopsis", "refseq_name": "plant U-box 23", "refseq_ac": [ { "id": "NP_181137", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181137", "type": "external" } ], "gene_names_uniprotkb": "PUB23; F11F19.16", "gene_names_refseq": "AtPUB23; F11F19.16; F11F19_16; PUB23; plant U-box 23", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase PUB23; 2.3.2.27; Plant U-box protein 23; RING-type E3 ubiquitin transferase PUB23; U-box domain-containing protein 23", "protein_names_refseq": "plant U-box 23", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35930)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11495788;14593172;14657406;18664614;18771922;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase that negatively regulates water stress response. May control in coordination with PUB23 a drought signaling pathway by ubiquitinating cytosolic RPN12a. Acts as a negative regulator of the immunity triggered by the pathogen-associated molecular patterns (PAMPs), in association with PUB22 and PUB24., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJ57", "ec_number_list": [], "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006952 defense response;GO:0016567 protein ubiquitination;GO:0009414 response to water deprivation;GO:0051865 protein autoubiquitination;GO:0002679 respiratory burst involved in defense response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84TG3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TH5-1", "uniprot_id": [ { "id": "AB25G_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TH5", "type": "external" } ], "mass": 72903.0, "length": 662, "protein_name": "ABC transporter G family member 25", "gene_name": "ABCG25", "organism": "Arabidopsis", "refseq_name": "ATP-binding cassette family G25", "refseq_ac": [ { "id": "NP_565030", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565030", "type": "external" } ], "gene_names_uniprotkb": "ABCG25; F17M19.11; WBC26", "gene_names_refseq": "ABCG25; ARABIDOPSIS THALIANA ATP-BINDING CASETTE FAMILY G 25; ATABCG25; ATP-binding casette G25; ATP-binding casette family G25; Arabidopsis thaliana ATP-binding cassette G25; F17M19.11; F17M19_11", "protein_names_uniprotkb": "ABC transporter G family member 25; ABC transporter ABCG.25; AtABCG25; AtWBC26; White-brown complex homolog protein 26", "protein_names_refseq": "ATP-binding cassette family G25", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G71960)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;11346655;14593172;18299247;19423640;20133881;20935463;22525244;24521878;26334616;26517905;27862469", "class_list": "", "function": "High affinity abscisic acid (ABA) transporter that mediates the export of ABA, with a preference for (+)-ABA, through the plasma membrane, especially in vascular tissues (e.g. phloem companion cells), and is involved in the intercellular ABA signaling pathway (PubMed:20133881, PubMed:20935463, PubMed:24521878, PubMed:26517905). Together with ABCG31, export ABA from the endosperm to deliver it to the embryo via ABCG30 and ABCG40-mediated import to suppress radicle extension and subsequent embryonic growth (PubMed:26334616)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "C0Z3C6;Q949Y4;Q9C8W6", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0015562 efflux transmembrane transporter activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0009409 response to cold;GO:0055085 transmembrane transport;GO:0009408 response to heat;GO:0010496 intercellular transport;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q84TH5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TI6-1", "uniprot_id": [ { "id": "CDKE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TI6", "type": "external" } ], "mass": 52797.0, "length": 470, "protein_name": "Cyclin-dependent kinase E-1", "gene_name": "CDKE-1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CDKE-1; CDK8; HEN3; MBK5.8; RAO1", "gene_names_refseq": "", "protein_names_uniprotkb": "Cyclin-dependent kinase E-1; 1; 2.7.11.22; 2.7.11.23; CDKE; Cyclin-dependent kinase 8; Protein HUA ENHANCER 3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63610)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11971144;14593172;15175247;17094738;17526732;23229550;27862469;9330910", "class_list": "", "function": "Involved in cell differentiation. Required for the specification of stamen and carpel identities and for the proper termination of stem cells in the floral meristem., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q70Z09;Q9FFQ3", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0019900 kinase binding;GO:0004693 cyclin-dependent protein serine/threonine kinase activity;GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000307 cyclin-dependent protein kinase holoenzyme complex;GO:0016592 mediator complex", "go_biological_process": "GO:0051301 cell division;GO:0010344 seed oilbody biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84TI6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TI7-1", "uniprot_id": [ { "id": "HKT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TI7", "type": "external" } ], "mass": 57450.0, "length": 506, "protein_name": "Sodium transporter HKT1", "gene_name": "HKT1", "organism": "Arabidopsis", "refseq_name": "high-affinity K+ transporter 1", "refseq_ac": [ { "id": "NP_567354", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567354", "type": "external" } ], "gene_names_uniprotkb": "HKT1; T9A4.5", "gene_names_refseq": "1; ATHKT1; HKT1; T9A4.5; high-affinity K+ transporter 1", "protein_names_uniprotkb": "Sodium transporter HKT1; AtHKT1", "protein_names_refseq": "high-affinity K+ transporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G10310)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;10759522;11344270;11698666;11959905;12417304;12727868;14593172;15347798;15486089;27862469", "class_list": "", "function": "Sodium transporter protein, which plays a central role in plant tolerance to salt. Upon prolongated exposure to high concentrations, Na(+) translocates from the roots to the transpiring leaves where it can increase to toxic level. Involved in Na(+) recirculation from shoots to roots, probably by mediating Na(+) loading into the phloem sap in shoots and unloading in roots, thereby removing large amounts of Na(+) from the shoot. Does not transport K(+) but regulates K(+) nutrient status via its ability to facilitate Na(+) homeostasis. Probably not involved in root uptake of Na(+)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 1, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 1, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 1, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O82614;Q68KI5;Q9M570;Q9SV90", "ec_number_list": [], "go_molecular_function": "GO:0015079 potassium ion transmembrane transporter activity;GO:0015081 sodium ion transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0006813 potassium ion transport;GO:0009651 response to salt stress;GO:0006814 sodium ion transport", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q84TI7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.1000000000000.100.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84UU4-1", "uniprot_id": [ { "id": "HUMS_ARATH", "url": "https://www.uniprot.org/uniprot/Q84UU4", "type": "external" } ], "mass": 63619.0, "length": 547, "protein_name": "Alpha-humulene/(-)-(E)-beta-caryophyllene synthase", "gene_name": "TPS21", "organism": "Arabidopsis", "refseq_name": "terpene synthase 21", "refseq_ac": [ { "id": "NP_001190374", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190374", "type": "external" } ], "gene_names_uniprotkb": "TPS21; MZF18.16; PUP8", "gene_names_refseq": "ATTPS21; MZF18.16; MZF18_16; TPS21; terpene synthase 21", "protein_names_uniprotkb": "Alpha-humulene/(-)-(E)-beta-caryophyllene synthase; (E)-beta-caryophyllene synthase; 4.2.3.-; 4.2.3.104; 4.2.3.133; 4.2.3.57; Alpha-copaene synthase; Alpha-humulene synthase; AtTPS21; Terpenoid synthase 21", "protein_names_refseq": "terpene synthase 21", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23960)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "12207221;12566586;12777052;12805595;15918888;18400103;27862469;9628582", "class_list": "", "function": "Involved in sesquiterpene (C15) biosynthesis. The major products are beta-caryophyllene and alpha-humulene. Does not convert geranyl diphosphate (GPP) to any monoterpenes., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84YI3;Q9FLW5", "ec_number_list": [ { "id": "4.2.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.-", "type": "external" }, { "id": "4.2.3.104", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.104", "type": "external" }, { "id": "4.2.3.133", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.133", "type": "external" }, { "id": "4.2.3.57", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.57", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0010334 sesquiterpene synthase activity;GO:0080016 (-)-E-beta-caryophyllene synthase activity;GO:0080017 alpha-humulene synthase activity;GO:0102877 alpha-copaene synthase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0051762 sesquiterpene biosynthetic process;GO:0016102 diterpenoid biosynthetic process;GO:0016106 sesquiterpenoid biosynthetic process;GO:0080027 response to herbivore", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84UU4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VQ0-1", "uniprot_id": [ { "id": "AGO9_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VQ0", "type": "external" } ], "mass": 100524.0, "length": 896, "protein_name": "Protein argonaute 9", "gene_name": "AGO9", "organism": "Arabidopsis", "refseq_name": "Argonaute family protein", "refseq_ac": [ { "id": "NP_197613", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197613", "type": "external" } ], "gene_names_uniprotkb": "AGO9; T10F18.180", "gene_names_refseq": "AGO9; ARGONAUTE 9; T10F18.180; T10F18_180", "protein_names_uniprotkb": "Protein argonaute 9", "protein_names_refseq": "Argonaute family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21150)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;12805595;17869110;20173091;20208518;21057207;27862469;30833711", "class_list": "", "function": "Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Main component of the RNA-induced silencing complex (RISC) that binds to a short guide RNA such as a microRNA (miRNA) or small interfering RNA (siRNA). RISC uses the mature miRNA or siRNA as a guide for slicer-directed cleavage of homologous mRNAs to repress gene expression. Associates preferentially with small RNAs of 24 nucleotide in length with a 5' terminal adenosine. Interacts with 24 nucleotide sRNAs derived from transposable elements (TEs). Required to silence pericentrometric-located TEs in female gametes and their accessory cells. Necessary to inactivate a significant proportion of long terminal repeat retrotransposons (LTRs) in the ovule. Required to specify cell fate in ovule. Involved in the control of female gamete formation by restricting the specification of gametophyte precursors in a dosage-dependent, non-cell-autonomous manner. Targeted by turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO9 function in RNA silencing., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q56X15;Q84YI4", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0004521 RNA endonuclease activity;GO:0035197 siRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006417 regulation of translation;GO:0051607 defense response to virus;GO:0031047 regulatory ncRNA-mediated gene silencing;GO:0010526 transposable element silencing", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84VQ0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VQ3-1", "uniprot_id": [ { "id": "CIPKQ_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VQ3", "type": "external" } ], "mass": 49629.0, "length": 439, "protein_name": "CBL-interacting serine/threonine-protein kinase 26", "gene_name": "CIPK26", "organism": "Arabidopsis", "refseq_name": "Ca2+regulated serine-threonine protein kinase family protein", "refseq_ac": [ { "id": "NP_850861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850861", "type": "external" } ], "gene_names_uniprotkb": "CIPK26; F13M11; PKS26; SnRK3.26", "gene_names_refseq": "CIPK26; calcineurin B-like protein (CBL)-interacting protein kinase 26", "protein_names_uniprotkb": "CBL-interacting serine/threonine-protein kinase 26; 2.7.11.1; SNF1-related kinase 3.26; SOS2-like protein kinase PKS26", "protein_names_refseq": "Ca2+regulated serine-threonine protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21326)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;12805596;23335733;25561503;26091701;27862469", "class_list": "", "function": "CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner. Involved in the calcium-dependent regulation of reactive oxygen species production by the NADPH oxidase RBOHF., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6ICZ5", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009536 plastid", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84VQ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VQ4-1", "uniprot_id": [ { "id": "NDHU_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VQ4", "type": "external" } ], "mass": 24438.0, "length": 218, "protein_name": "NAD(P)H-quinone oxidoreductase subunit U, chloroplastic", "gene_name": "ndhU", "organism": "Arabidopsis", "refseq_name": "Chaperone DnaJ-domain superfamily protein", "refseq_ac": [ { "id": "NP_001031919", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031919", "type": "external" } ], "gene_names_uniprotkb": "ndhU; CRRL; F13M11.2", "gene_names_refseq": "CHLORORESPIRATORY REDUCTION L; CRRL; NADH dehydrogenase-like complex U; NdhU", "protein_names_uniprotkb": "NAD(P)H-quinone oxidoreductase subunit U, chloroplastic; 7.1.1.-; NAD(P)H dehydrogenase subunit U; NADH-plastoquinone oxidoreductase subunit U; NDH subunit U; Protein CHLORORESPIRATORY REDUCTION L", "protein_names_refseq": "Chaperone DnaJ-domain superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21430)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;21505067;21785130;24225949;27862469", "class_list": "", "function": "NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q63Z93", "ec_number_list": [ { "id": "7.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0048038 quinone binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84VQ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VW5-1", "uniprot_id": [ { "id": "MED32_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VW5", "type": "external" } ], "mass": 16013.0, "length": 151, "protein_name": "Mediator of RNA polymerase II transcription subunit 32", "gene_name": "MED32", "organism": "Arabidopsis", "refseq_name": "mediator of RNA polymerase II transcription subunit-like protein", "refseq_ac": [ { "id": "NP_172641", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172641", "type": "external" } ], "gene_names_uniprotkb": "MED32; F25C20.9; MED29; MED2_1; MED2", "gene_names_refseq": "F25C20.9; F25C20_9; MED32", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 32; Mediator of RNA polymerase II transcription subunit 2", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11760)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;17560376;22021418;25561503;25877331;27862469;29654922", "class_list": "", "function": "Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SAA1", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0042542 response to hydrogen peroxide;GO:0009631 cold acclimation;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84VW5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84W04-1", "uniprot_id": [ { "id": "CNIH4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84W04", "type": "external" } ], "mass": 16436.0, "length": 137, "protein_name": "Protein cornichon homolog 4", "gene_name": "F5O11.11", "organism": "Arabidopsis", "refseq_name": "Cornichon family protein", "refseq_ac": [ { "id": "NP_172701", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172701", "type": "external" } ], "gene_names_uniprotkb": "F5O11.11", "gene_names_refseq": "F5O11.11; F5O11_11", "protein_names_uniprotkb": "Protein cornichon homolog 4", "protein_names_refseq": "Cornichon family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12390)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;14593172;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LNA7", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q84W04-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84W56-1", "uniprot_id": [ { "id": "RNJ_ARATH", "url": "https://www.uniprot.org/uniprot/Q84W56", "type": "external" } ], "mass": 100554.0, "length": 911, "protein_name": "Ribonuclease J", "gene_name": "RNJ", "organism": "Arabidopsis", "refseq_name": "RNA-metabolising metallo-beta-lactamase family protein", "refseq_ac": [ { "id": "NP_201147", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201147", "type": "external" } ], "gene_names_uniprotkb": "RNJ; EMB2746; MLE2.5; MLE2.6", "gene_names_refseq": "MLE2.5; MLE2_5; emb2746; embryo defective 2746", "protein_names_uniprotkb": "Ribonuclease J; 3.1.-.-; Protein EMBRYO DEFECTIVE 2746; RNase J", "protein_names_refseq": "RNA-metabolising metallo-beta-lactamase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63420)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "14593172;15266054;19245862;19376835;21768351;22033332;23111157;23572148;23660473;23776212;25561503;25871650;26091701;27862469;9501997", "class_list": "", "function": "Essential protein required during embryogenesis, especially in initiating and maintaining the organization of shoot apical meristems (SAMs), cotyledons, and hypocotyls (PubMed:15266054, PubMed:25871650). Involved in auxin-mediated pathways during embryogenesis (PubMed:25871650). RNase that has both endonuclease and 5'-3' exonuclease activities. Involved in RNA surveillance to prevent overaccumulation of antisense RNA (PubMed:22033332). Probably involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay (By similarity)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67YC1;Q9FMV9;Q9FMW0", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0046872 metal ion binding;GO:0004519 endonuclease activity;GO:0004521 RNA endonuclease activity;GO:0004532 RNA exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006397 mRNA processing;GO:0009416 response to light stimulus;GO:0006364 rRNA processing;GO:0009658 chloroplast organization;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q84W56-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84W65-1", "uniprot_id": [ { "id": "SUFE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84W65", "type": "external" } ], "mass": 40834.0, "length": 371, "protein_name": "SufE-like protein 1, chloroplastic/mitochondrial", "gene_name": "SUFE1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "SUFE1; EMB1374; M3E9.70; SUFE", "gene_names_refseq": "", "protein_names_uniprotkb": "SufE-like protein 1, chloroplastic/mitochondrial; AtSUFE1; AtSUFE; Chloroplastic SufE; CpSufE; Protein EMBRYO DEFECTIVE 1374; Protein SULFUR E 1; Protein SULFUR E", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26500)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;14593172;16437155;16455656;17452319;23660473;23776212;24203231;25012657;27862469", "class_list": "", "function": "Participates in cysteine desulfurization mediated by NFS2 in chloroplast and NIFS1 in mitochondrion (PubMed:16437155). Activates the cysteine desulfurase activity of NFS2 (PubMed:16455656). Cysteine desulfurization mobilizes sulfur from L-cysteine to yield L-alanine and supplies the inorganic sulfur for iron-sulfur (Fe-S) cluster formation. Glutaredoxins regulate SUFE1 activity by inducing its reduction and deglutathionylation (PubMed:24203231)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65584", "ec_number_list": [], "go_molecular_function": "GO:0008047 enzyme activator activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q84W65-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84W92-1", "uniprot_id": [ { "id": "ANM13_ARATH", "url": "https://www.uniprot.org/uniprot/Q84W92", "type": "external" } ], "mass": 59915.0, "length": 535, "protein_name": "Probable histone-arginine methyltransferase 1.3", "gene_name": "PRMT13", "organism": "Arabidopsis", "refseq_name": "protein arginine methyltransferase 4B", "refseq_ac": [ { "id": "NP_187349", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187349", "type": "external" } ], "gene_names_uniprotkb": "PRMT13; CARM1A; F17A9.8; PRMT4B", "gene_names_refseq": "ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4B; ATPRMT4B; PRMT4B; protein arginine methyltransferase 4B", "protein_names_uniprotkb": "Probable histone-arginine methyltransferase 1.3; 2.1.1.319; AtPRMT13; AtPRMT4B; Coactivator-associated methyltransferase 1A; Protein arginine N-methyltransferase 4B", "protein_names_refseq": "protein arginine methyltransferase 4B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06930)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;17005254;22060019;27676073;27862469", "class_list": "", "function": "Methylates (mono- and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in several proteins involved in DNA packaging, transcription regulation, and mRNA stability (By similarity). Recruited to promoters upon gene activation, methylates histone H3 and activates transcription via chromatin remodeling (PubMed:27676073). Positive regulator in the oxidative stress tolerance that promotes the expression of enzymes preventing oxidative stress such as APX1 and GPX1 by histone methylation (H3R17me2a). Confers tolerance to cadmium CdCl(2) and salt NaCl stresses (PubMed:27676073)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WRU3;Q66GI8;Q9M906", "ec_number_list": [ { "id": "2.1.1.319", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.319", "type": "external" } ], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0046982 protein heterodimerization activity;GO:0016274 protein-arginine N-methyltransferase activity;GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity;GO:0035241 protein-arginine omega-N monomethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0046686 response to cadmium ion", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84W92-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84W98-1", "uniprot_id": [ { "id": "CLE41_ARATH", "url": "https://www.uniprot.org/uniprot/Q84W98", "type": "external" } ], "mass": 11018.0, "length": 99, "protein_name": "CLAVATA3/ESR (CLE)-related protein 41", "gene_name": "CLE41", "organism": "Arabidopsis", "refseq_name": "CLAVATA3/ESR-RELATED 41", "refseq_ac": [ { "id": "NP_566754", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566754", "type": "external" } ], "gene_names_uniprotkb": "CLE41; K7P8.35", "gene_names_refseq": "CLAVATA3/ESR-RELATED 41; CLE41", "protein_names_uniprotkb": "CLAVATA3/ESR (CLE)-related protein 41; TDIF-like protein; Tracheary element differentiation inhibitory factor-like protein", "protein_names_refseq": "CLAVATA3/ESR-RELATED 41", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24770)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10819329;14593172;16489133;16902140;18034320;18078779;18812507;19011104;20016993;27055373;27498761;27862469;28607033", "class_list": "", "function": "Extracellular signal peptide that regulates cell fate. May act with TDR as a ligand-receptor pair in a signal transduction pathway that represses tracheary element differentiation but promotes the formation of procambial cells adjacent to phloem cells in the veins in an auxin-dependent manner. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LB23", "ec_number_list": [], "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0048046 apoplast", "go_biological_process": "GO:0051301 cell division;GO:0045595 regulation of cell differentiation;GO:0045168 cell-cell signaling involved in cell fate commitment;GO:0010087 phloem or xylem histogenesis;GO:0010067 procambium histogenesis", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q84W98-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WB7-1", "uniprot_id": [ { "id": "GINT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WB7", "type": "external" } ], "mass": 86431.0, "length": 765, "protein_name": "Glucosamine inositolphosphorylceramide transferase 1", "gene_name": "GINT1", "organism": "Arabidopsis", "refseq_name": "glycosyltransferase family protein 47", "refseq_ac": [ { "id": "NP_196070", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196070", "type": "external" } ], "gene_names_uniprotkb": "GINT1; T32M21.100", "gene_names_refseq": "T32M21.100; T32M21_100", "protein_names_uniprotkb": "Glucosamine inositolphosphorylceramide transferase 1; 2.7.1.227; GT64 C5; Glycosyltransferase family protein 64 protein C5", "protein_names_refseq": "glycosyltransferase family protein 47", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04500)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;16045474;23499054;24905498;27862469;29760197;32407692", "class_list": "", "function": "Glycosyltransferase that mediates the glycosylation of glycosylinositol phosphorylceramides (GIPCs), the major sphingolipids in the plasma membrane; acts as a HexN(Ac)-specific GIPC sugar transferase and accepts glucosamine (GlcN) and N-acetylglucosamine (GlcNAc) as the sugar unit (PubMed:29760197). Responsible for the glycosylation of a subgroup of GIPCs found in seeds and pollen that contain GlcNAc and GlcN (GlcN(Ac)) (PubMed:29760197). Maybe involved in the maintenance of cell-cell adhesion (PubMed:29760197)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ75", "ec_number_list": [ { "id": "2.7.1.227", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.227", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016757 glycosyltransferase activity;GO:0045140 inositol phosphoceramide synthase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0009651 response to salt stress;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84WB7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WK0-1", "uniprot_id": [ { "id": "RSL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WK0", "type": "external" } ], "mass": 38770.0, "length": 352, "protein_name": "Transcription factor RSL2", "gene_name": "RSL2", "organism": "Arabidopsis", "refseq_name": "ROOT HAIR DEFECTIVE 6-LIKE 2", "refseq_ac": [ { "id": "NP_195114", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195114", "type": "external" } ], "gene_names_uniprotkb": "RSL2; BHLH85; EN115; F17I5.70", "gene_names_refseq": "F17I5.70; F17I5_70; ROOT HAIR DEFECTIVE 6-LIKE 2; RSL2", "protein_names_uniprotkb": "Transcription factor RSL2; AtbHLH85; Basic helix-loop-helix protein 85; Protein RHD SIX-LIKE 2; Protein ROOT HAIR DEFECTIVE 6-LIKE 2; Transcription factor EN 115; Transcription factor bHLH85; bHLH 85; bHLH transcription factor bHLH085", "protein_names_refseq": "ROOT HAIR DEFECTIVE 6-LIKE 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33880)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;12679534;12897250;14593172;14600211;20139979;27452638;27862469;29651114;31988260", "class_list": "", "function": "Transcription factor involved in the regulation of root hair elongation (PubMed:20139979, PubMed:27452638). Does not seem to be a direct transcriptional target of RHD6 and RSL1 (PubMed:20139979). Involved in the regulation of root hair elongation in response to low phosphate (PubMed:29651114)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81756;Q8S3D3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0009733 response to auxin;GO:0048766 root hair initiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q84WK0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WM7-1", "uniprot_id": [ { "id": "PPME1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WM7", "type": "external" } ], "mass": 39142.0, "length": 361, "protein_name": "Pectinesterase PPME1", "gene_name": "PPME1", "organism": "Arabidopsis", "refseq_name": "Pectin lyase-like superfamily protein", "refseq_ac": [ { "id": "NP_177152", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177152", "type": "external" } ], "gene_names_uniprotkb": "PPME1; ARATH9; T17F3.3", "gene_names_refseq": "ATPPME1; PPME1; T17F3.3; T17F3_3", "protein_names_uniprotkb": "Pectinesterase PPME1; 3.1.1.11; AtPME9; AtPPME1; PE PPME1; Pectin methylesterase 9; Pectin methylesterase PPME1; Protein POLLEN SPECIFIC PME 1", "protein_names_refseq": "Pectin lyase-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69940)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;15337457;16564517;16622707;17971035;27862469", "class_list": "", "function": "Acts in the modification of cell walls via demethylesterification of cell wall pectin. Involved in the pollen tube growth and determination of pollen tube morphology., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAS7", "ec_number_list": [ { "id": "3.1.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.11", "type": "external" }, { "id": "3.2.2.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.22", "type": "external" } ], "go_molecular_function": "GO:0030599 pectinesterase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0009505 plant-type cell wall;GO:0090406 pollen tube", "go_biological_process": "GO:0050829 defense response to Gram-negative bacterium;GO:0045490 pectin catabolic process;GO:0009860 pollen tube growth;GO:0042545 cell wall modification", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84WM7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WN3-1", "uniprot_id": [ { "id": "SWT17_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WN3", "type": "external" } ], "mass": 26799.0, "length": 241, "protein_name": "Bidirectional sugar transporter SWEET17", "gene_name": "SWEET17", "organism": "Arabidopsis", "refseq_name": "Nodulin MtN3 family protein", "refseq_ac": [ { "id": "NP_193327", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193327", "type": "external" } ], "gene_names_uniprotkb": "SWEET17; FCAALL.237; dl4000c", "gene_names_refseq": "AtSWEET17; DL4000C; FCAALL.237; SWEET17", "protein_names_uniprotkb": "Bidirectional sugar transporter SWEET17; AtSWEET17; Protein SUGARS WILL EVENTUALLY BE EXPORTED TRANSPORTERS 17", "protein_names_refseq": "Nodulin MtN3 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15920)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;21107422;23583552;24027245;24381066;25988582;27862469;9461215", "class_list": "", "function": "Acts as a vacuolar hexose transporter (PubMed:25988582). Regulates fructose (Fru) homeostasis in leaves and roots by exporting/importing Fru through the tonoplast regarding metabolic demand (PubMed:23583552, PubMed:24381066)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4JKX8;O23441", "ec_number_list": [], "go_molecular_function": "GO:0051119 sugar transmembrane transporter activity;GO:0005353 fructose transmembrane transporter activity;GO:0015284 fructose uniporter activity", "go_cellular_component": "GO:0016020 membrane;GO:0009507 chloroplast;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0070417 cellular response to cold;GO:0051260 protein homooligomerization;GO:0007623 circadian rhythm;GO:0008643 carbohydrate transport;GO:0006995 cellular response to nitrogen starvation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84WN3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WV0-1", "uniprot_id": [ { "id": "GLYC7_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WV0", "type": "external" } ], "mass": 66294.0, "length": 598, "protein_name": "Serine hydroxymethyltransferase 7", "gene_name": "SHM7", "organism": "Arabidopsis", "refseq_name": "serine hydroxymethyltransferase 7", "refseq_ac": [ { "id": "NP_564473", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564473", "type": "external" } ], "gene_names_uniprotkb": "SHM7; F7F23.9; SHMT7", "gene_names_refseq": "F7F23.9; F7F23_9; SHM7; serine hydroxymethyltransferase 7", "protein_names_uniprotkb": "Serine hydroxymethyltransferase 7; 2.1.2.1; AtSHMT7; Glycine hydroxymethyltransferase 7; Serine methylase 7", "protein_names_refseq": "serine hydroxymethyltransferase 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G36370)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12730263;14593172;20518745;23111157;27862469", "class_list": "", "function": "Catalyzes the interconversion of serine and glycine., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFB5;Q9C8X6", "ec_number_list": [ { "id": "2.1.2.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.2.1", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0004372 glycine hydroxymethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0046686 response to cadmium ion;GO:0035999 tetrahydrofolate interconversion;GO:0046653 tetrahydrofolate metabolic process;GO:0046500 S-adenosylmethionine metabolic process;GO:0019264 glycine biosynthetic process from serine", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84WV0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WV4-1", "uniprot_id": [ { "id": "SC23A_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WV4", "type": "external" } ], "mass": 96004.0, "length": 880, "protein_name": "Protein transport protein SEC23 A", "gene_name": "SEC23A", "organism": "Arabidopsis", "refseq_name": "Sec23/Sec24 protein transport family protein", "refseq_ac": [ { "id": "NP_001329285", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329285", "type": "external" } ], "gene_names_uniprotkb": "SEC23A; T7B11.7", "gene_names_refseq": "T7B11.7; T7B11_7", "protein_names_uniprotkb": "Protein transport protein SEC23 A; AtSEC23A; AtSec23/Sec24L2; Protein transport protein SEC23/SEC24-like 2", "protein_names_refseq": "Sec23/Sec24 protein transport family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G01810)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;14593172;23111157;23820729;24587212;25561503;27317568;27862469;29167316;29390074;29654922", "class_list": "", "function": "Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER) (By similarity). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity). May contribute to COPII-coated vesicles formation and ER-Golgi vesicle transport (PubMed:29390074). Together with SEC23D, essential for pollen wall development and exine patterning, probably by regulating endoplasmic reticulum (ER) export of lipids and proteins (e.g. sporopollenin) necessary for pollen wall formation (PubMed:29390074). Also involved in plastid physiology in anther tapetal cells (PubMed:29390074)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67ZK9;Q94C84;Q9SYI1", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005789 endoplasmic reticulum membrane;GO:0070971 endoplasmic reticulum exit site;GO:0030127 COPII vesicle coat;GO:0009507 chloroplast", "go_biological_process": "GO:0090110 COPII-coated vesicle cargo loading;GO:0006886 intracellular protein transport;GO:0010584 pollen exine formation;GO:0048658 anther wall tapetum development", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q84WV4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84WW2-1", "uniprot_id": [ { "id": "6PGL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q84WW2", "type": "external" } ], "mass": 35645.0, "length": 325, "protein_name": "6-phosphogluconolactonase 3, chloroplastic", "gene_name": "PGL3", "organism": "Arabidopsis", "refseq_name": "NagB/RpiA/CoA transferase-like superfamily protein", "refseq_ac": [ { "id": "NP_568445", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568445", "type": "external" } ], "gene_names_uniprotkb": "PGL3; EMB2024; K16H17.11", "gene_names_refseq": "6-PHOSPHOGLUCONOLACTONASE 3; EMB2024; EMBRYO DEFECTIVE 2024; K16H17.11; K16H17_11; PGL3", "protein_names_uniprotkb": "6-phosphogluconolactonase 3, chloroplastic; 3.1.1.31; 6PGL3; Protein EMBRYO DEFECTIVE 2024", "protein_names_refseq": "NagB/RpiA/CoA transferase-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G24400)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10048488;14593172;15266054;17951448;19457984;23111157;23621281;24008768;27862469", "class_list": "", "function": "Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate (PubMed:19457984). Involved in the regulation of cellular redox state; enzymatic activity is required for this function (PubMed:19457984). Required for sugar-dependent expression of nitrate assimilation genes in the nucleus of root cells (PubMed:23621281)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42135;Q8LD77;Q9FIN2", "ec_number_list": [ { "id": "3.1.1.31", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.31", "type": "external" } ], "go_molecular_function": "GO:0017057 6-phosphogluconolactonase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0071461 cellular response to redox state;GO:0005975 carbohydrate metabolic process;GO:0009051 pentose-phosphate shunt, oxidative branch;GO:0042742 defense response to bacterium;GO:0042128 nitrate assimilation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q84WW2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84Y95-1", "uniprot_id": [ { "id": "GRS14_ARATH", "url": "https://www.uniprot.org/uniprot/Q84Y95", "type": "external" } ], "mass": 19309.0, "length": 173, "protein_name": "Monothiol glutaredoxin-S14, chloroplastic", "gene_name": "GRXS14", "organism": "Arabidopsis", "refseq_name": "CAX interacting protein 1", "refseq_ac": [ { "id": "NP_191050", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191050", "type": "external" } ], "gene_names_uniprotkb": "GRXS14; CXIP1; F28P10.120; GRX5P; GRXCP", "gene_names_refseq": "ATGRXCP; CAX interacting protein 1; CXIP1; GLUTAREDOXIN", "protein_names_uniprotkb": "Monothiol glutaredoxin-S14, chloroplastic; AtGRXcp; AtGrxS14; CAX-interacting protein 1; CXIP1", "protein_names_refseq": "CAX interacting protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54900)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130713;12480930;14593172;15170506;16720602;16829529;18044966;20516625;24203231;24714563;25012657;27862469;30824043", "class_list": "", "function": "May only reduce GSH-thiol disulfides, but not protein disulfides (Potential). Probably involved in the regulation of the redox state of the BOLA proteins (Potential). May act as Fe-S cluster donors to Fe-S cluster-requiring proteins (PubMed:18044966). May protect cells against protein oxidative damage (PubMed:16829529). May regulate CAX cation transporters (PubMed:16829529). The GRXS14-BOLA1 heterodimer binds a labile, oxygen sensitive Fe-S cluster (PubMed:24714563)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SV38", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0015297 antiporter activity;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006812 monoatomic cation transport", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q84Y95-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GS60-1", "uniprot_id": [ { "id": "HCAR_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GS60", "type": "external" } ], "mass": 51661.0, "length": 462, "protein_name": "7-hydroxymethyl chlorophyll a reductase, chloroplastic", "gene_name": "HCAR", "organism": "Arabidopsis", "refseq_name": "coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family", "refseq_ac": [ { "id": "NP_171956", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171956", "type": "external" } ], "gene_names_uniprotkb": "HCAR; HMCR; T1G11.13", "gene_names_refseq": "7-hydroxymethyl chlorophyll a (HMChl) reductase; HCAR; T1G11.13; T1G11_13", "protein_names_uniprotkb": "7-hydroxymethyl chlorophyll a reductase, chloroplastic; 1.17.7.2", "protein_names_refseq": "coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04620)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11910074;14593172;21934147;23200839;27862469;29167316", "class_list": "", "function": "Probable iron-sulfur flavoprotein that converts 7-hydroxymethyl chlorophyll a to chlorophyll a using ferredoxin as a reducing equivalent. Catalyzes the reduction of a hydroxymethyl group to a methyl group. Belongs to the chlorophyll catabolic enzymes (CCEs)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23023", "ec_number_list": [ { "id": "1.17.7.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.17.7.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051536 iron-sulfur cluster binding;GO:0090415 7-hydroxymethyl chlorophyll a reductase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast", "go_biological_process": "GO:0015994 chlorophyll metabolic process;GO:0033354 chlorophyll cycle", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GS60-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GS71-1", "uniprot_id": [ { "id": "KN4A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GS71", "type": "external" } ], "mass": 116734.0, "length": 1035, "protein_name": "Kinesin-like protein KIN-4A", "gene_name": "KIN4A", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_199593", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199593", "type": "external" } ], "gene_names_uniprotkb": "KIN4A; FRA1; MCA23.16", "gene_names_refseq": "FRA1; FRAGILE FIBER 1; MCA23.16; MCA23_16", "protein_names_uniprotkb": "Kinesin-like protein KIN-4A; AtKINESIN-4A; Protein FRAGILE FIBER 1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47820)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10048488;11472632;12468730;16448571;21914648;22038119;22074104;25600279;25646318;27862469", "class_list": "", "function": "Kinesin-like motor protein involved in the control of the oriented deposition of cellulose microfibrils (PubMed:12468730, Ref.6). Its motor activity is directed toward the microtubule's plus end. It possesses the potential to drive long-distance transport of cargo along cortical microtubules (PubMed:21914648, PubMed:25646318). Regulates cell wall mechanics during cell elongation, by the regulation of primary and secondary walls deposition (PubMed:25600279, PubMed:25646318, Ref.6). Contributes to cortical microtubule-mediated trafficking of cell wall components (PubMed:25646318)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FIJ9", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity;GO:0008574 plus-end-directed microtubule motor activity", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005875 microtubule associated complex", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0030705 cytoskeleton-dependent intracellular transport;GO:0007052 mitotic spindle organization;GO:0051231 spindle elongation;GO:0009832 plant-type cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GS71-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GSJ6-1", "uniprot_id": [ { "id": "LQY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GSJ6", "type": "external" } ], "mass": 16334.0, "length": 154, "protein_name": "Protein disulfide-isomerase LQY1, chloroplastic", "gene_name": "LQY1", "organism": "Arabidopsis", "refseq_name": "DnaJ/Hsp40 cysteine-rich domain superfamily protein", "refseq_ac": [ { "id": "NP_177698", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177698", "type": "external" } ], "gene_names_uniprotkb": "LQY1; F10A5.12; F10A5.4", "gene_names_refseq": "F10A5.12; F10A5_12; LOW QUANTUM YIELD OF PHOTOSYSTEM II 1; LQY1", "protein_names_uniprotkb": "Protein disulfide-isomerase LQY1, chloroplastic; 5.3.4.1; Protein LOW QUANTUM YIELD OF PHOTOSYSTEM II 1", "protein_names_refseq": "DnaJ/Hsp40 cysteine-rich domain superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G75690)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11910074;14593172;21586683;24632535;27862469", "class_list": "", "function": "Protein disulfide-isomerase probably involved upon formation of a complex with HHL1 in maintaining photosystem II (PSII) activity under high light by regulating repair and reassembly of PSII complexes., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LR08", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003756 protein disulfide isomerase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0010206 photosystem II repair", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GSJ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GTR4-1", "uniprot_id": [ { "id": "PULA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GTR4", "type": "external" } ], "mass": 107067.0, "length": 965, "protein_name": "Pullulanase 1, chloroplastic", "gene_name": "PU1", "organism": "Arabidopsis", "refseq_name": "limit dextrinase", "refseq_ac": [ { "id": "NP_001330089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001330089", "type": "external" } ], "gene_names_uniprotkb": "PU1; LDA; T19N18.90", "gene_names_refseq": "ATLDA; ATPU1; LDA; LIMIT DEXTRINASE; PU1; PULLULANASE 1; PULLULANASE; T19N18.90; T19N18_90; limit dextrinase", "protein_names_uniprotkb": "Pullulanase 1, chloroplastic; 3.2.1.142; AtLDA; AtPU1; Protein LIMIT DEXTRINASE", "protein_names_refseq": "limit dextrinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04360)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;15849301;16495218;18431481;18815382;19074683;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Involved in starch degradation and also probably in the trimming of pre-amylopectin chains during starch synthesis., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0010303 limit dextrinase activity;GO:0051060 pullulanase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0005983 starch catabolic process;GO:0019252 starch biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GTR4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUJ2-1", "uniprot_id": [ { "id": "PDLP5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUJ2", "type": "external" } ], "mass": 31804.0, "length": 299, "protein_name": "Plasmodesmata-located protein 5", "gene_name": "PDLP5", "organism": "Arabidopsis", "refseq_name": "Receptor-like protein kinase-related family protein", "refseq_ac": [ { "id": "NP_564997", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564997", "type": "external" } ], "gene_names_uniprotkb": "PDLP5; CRRSP2; F5A18.13; HWI1", "gene_names_refseq": "F5A18.13; F5A18_13; HOPW1-1-INDUCED GENE1; HWI1; PDLP5; PLASMODESMATA-LOCATED PROTEIN 5", "protein_names_uniprotkb": "Plasmodesmata-located protein 5; Cysteine-rich repeat protein HWI1; Cysteine-rich repeat secretory protein 2; PD-located protein 5; Plasmodesmata localizing protein 5; Protein HOPW1-1-INDUCED 1", "protein_names_refseq": "Receptor-like protein kinase-related family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G70690)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11402176;14593172;16531493;18215111;18266921;19704520;20886105;21934146;23749844;27078071;27862469;28876233", "class_list": "", "function": "Modulates cell-to-cell trafficking. Has a positive role in innate immunity. Required for systemic acquired resistance (SAR) which is mediated by the signaling molecules azelaic acid (AzA), glycerol-3-phosphate (G3P), and salicylic acid (SA) (PubMed:27078071). Negative regulator of plasmodesmata permeability triggered by SA during immune responses, through regulation of callose deposition (PubMed:21934146, PubMed:23749844). Delays the trafficking of Tobacco Mosaic Virus (TMV) movement protein (MP). Required for symplastic signal transport (PubMed:27078071)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 1, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 1, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 1, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A8WAS5;Q8LA52;Q9CAB9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0051707 response to other organism;GO:0009615 response to virus;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8GUJ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.1000000000000.100.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUK7-1", "uniprot_id": [ { "id": "RMA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUK7", "type": "external" } ], "mass": 26984.0, "length": 243, "protein_name": "E3 ubiquitin-protein ligase RMA3", "gene_name": "RMA3", "organism": "Arabidopsis", "refseq_name": "RING membrane-anchor 3", "refseq_ac": [ { "id": "NP_194477", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194477", "type": "external" } ], "gene_names_uniprotkb": "RMA3; F27G19.70", "gene_names_refseq": "ATRMA3; F27G19.70; F27G19_70; RING membrane-anchor 3; RMA3", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RMA3; 2.3.2.27; Protein RING membrane-anchor 3; RING-type E3 ubiquitin transferase RMA3", "protein_names_refseq": "RING membrane-anchor 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G27470)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;15644464;19224217;19234086;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZS2", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity;GO:0044390 ubiquitin-like protein conjugating enzyme binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0071456 cellular response to hypoxia;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GUK7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUL2-1", "uniprot_id": [ { "id": "MOS14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUL2", "type": "external" } ], "mass": 106917.0, "length": 958, "protein_name": "Transportin MOS14", "gene_name": "MOS14", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": [ { "id": "NP_201066", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201066", "type": "external" } ], "gene_names_uniprotkb": "MOS14; K19B1.21", "gene_names_refseq": "14; K19B1.1; K19B1_1; MOS14; modifier of snc1-1", "protein_names_uniprotkb": "Transportin MOS14; Importin beta MOS14; Protein MODIFIER OF SNC1 14; TRN-SR; Transportin-SR", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G62600)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10718197;14593172;21738492;27862469;9872454", "class_list": "", "function": "Functions as a nuclear import receptor for serine-arginine rich (SR) proteins. Regulates nuclear import of SR proteins that are required for proper splicing of the two resistance (R) genes SNC1 and RPS4, a crucial step for their functions in plant immunity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FJI6", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0043484 regulation of RNA splicing;GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GUL2-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUM2-1", "uniprot_id": [ { "id": "HSP7I_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUM2", "type": "external" } ], "mass": 73075.0, "length": 682, "protein_name": "Heat shock 70 kDa protein 9, mitochondrial", "gene_name": "HSP70-9", "organism": "Arabidopsis", "refseq_name": "mitochondrial heat shock protein 70-1", "refseq_ac": [ { "id": "NP_001328002", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328002", "type": "external" } ], "gene_names_uniprotkb": "HSP70-9; F20D10.30; HSCA1; MTHSC70-1", "gene_names_refseq": "F20D10.30; F20D10_30; mitochondrial heat shock protein 70-1; mtHsc70-1", "protein_names_uniprotkb": "Heat shock 70 kDa protein 9, mitochondrial; AtHscA1; AtHsp70-9; Chaperone protein HscA homolog 1; Heat shock protein 70-9; Mitochondrial heat shock protein 70-1; mtHsc70-1", "protein_names_refseq": "mitochondrial heat shock protein 70-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37910)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;11402207;11599561;14593172;18463617;19865480;20466843;25561503;25732537;27862469;30833711", "class_list": "", "function": "Chaperone involved in the maturation of iron-sulfur [Fe-S] cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HSCB and ISU1 (PubMed:19865480). In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WU4;Q9SZJ3", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0051082 unfolded protein binding;GO:0016887 ATP hydrolysis activity;GO:0031072 heat shock protein binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0006457 protein folding;GO:0042026 protein refolding;GO:0017004 cytochrome complex assembly;GO:0140964 intracellular auxin homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8GUM2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUN2-1", "uniprot_id": [ { "id": "HINT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUN2", "type": "external" } ], "mass": 16000.0, "length": 147, "protein_name": "Adenylylsulfatase HINT1", "gene_name": "HINT1", "organism": "Arabidopsis", "refseq_name": "HIS triad family protein 3", "refseq_ac": [ { "id": "NP_567038", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567038", "type": "external" } ], "gene_names_uniprotkb": "HINT1; 5P19_140; HIT3", "gene_names_refseq": "HINT1; HIS triad family protein 3; HISTIDINE TRIAD NUCLEOTIDE-BINDING 1; HIT3", "protein_names_uniprotkb": "Adenylylsulfatase HINT1; 3.6.2.1; HIS triad family protein 3; Histidine triad nucleotide-binding protein 1", "protein_names_refseq": "HIS triad family protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G56490)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;14593172;18463617;19329564;19376835;19896942;20466843;23328941;23572148;23776212;25561503;27862469;28011693;30833711", "class_list": "", "function": "Possesses adenylylsulfatase activity in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LXZ1", "ec_number_list": [ { "id": "3.6.2.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.2.1", "type": "external" }, { "id": "3.6.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.29", "type": "external" }, { "id": "3.9.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.9.1.-", "type": "external" }, { "id": "2.7.7.51", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.51", "type": "external" }, { "id": "2.7.7.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.5", "type": "external" } ], "go_molecular_function": "GO:0000166 nucleotide binding;GO:0047627 adenylylsulfatase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005829 cytosol", "go_biological_process": "GO:0006790 sulfur compound metabolic process;GO:0009150 purine ribonucleotide metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8GUN2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUN5-1", "uniprot_id": [ { "id": "PHL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUN5", "type": "external" } ], "mass": 46221.0, "length": 413, "protein_name": "Protein PHR1-LIKE 1", "gene_name": "PHL1", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": [ { "id": "NP_001078629", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078629", "type": "external" } ], "gene_names_uniprotkb": "PHL1; F3F24.100", "gene_names_refseq": "F3F24.100; F3F24_100; PHL1; PHR1-like 1", "protein_names_uniprotkb": "Protein PHR1-LIKE 1; Myb-like transcription factor 1", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G29000)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11511543;20838596;21343311;21536906;23788639;26586833;27862469", "class_list": "", "function": "Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H6E5;F4KBG7;Q8LEY3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0048364 root development;GO:1901000 regulation of response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GUN5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GUQ8-1", "uniprot_id": [ { "id": "XDH1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GUQ8", "type": "external" } ], "mass": 149196.0, "length": 1361, "protein_name": "Xanthine dehydrogenase 1", "gene_name": "XDH1", "organism": "Arabidopsis", "refseq_name": "xanthine dehydrogenase 1", "refseq_ac": [ { "id": "NP_195215", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195215", "type": "external" } ], "gene_names_uniprotkb": "XDH1; T11I11.130", "gene_names_refseq": "ATXDH1; F11I11.130; F11I11_130; XANTHINE DEHYDROGENASE 1; XDH1; xanthine dehydrogenase 1", "protein_names_uniprotkb": "Xanthine dehydrogenase 1; 1.17.1.4; AtXDH1", "protein_names_refseq": "xanthine dehydrogenase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34890)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14726515;15941399;17872919;18266920;19376835;19915948;20153325;27862469", "class_list": "", "function": "Key enzyme involved in purine catabolism. Catalyzes the oxidation of hypoxanthine to xanthine and the oxidation of xanthine to urate. Regulates the level of ureides and plays an important role during plant growth and development, senescence and response to stresses. Possesses NADH oxidase activity and may contribute to the generation of superoxide anions in planta., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SW46", "ec_number_list": [ { "id": "1.17.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:1.17.1.4", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0071949 FAD binding;GO:0051537 2 iron, 2 sulfur cluster binding;GO:0016491 oxidoreductase activity;GO:0004854 xanthine dehydrogenase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006145 purine nucleobase catabolic process;GO:0000302 response to reactive oxygen species;GO:0009414 response to water deprivation;GO:0042554 superoxide anion generation;GO:0046110 xanthine metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GUQ8-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GV50-1", "uniprot_id": [ { "id": "PLA2D_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GV50", "type": "external" } ], "mass": 20617.0, "length": 191, "protein_name": "Phospholipase A2-delta", "gene_name": "PLA2-DELTA", "organism": "Arabidopsis", "refseq_name": "Phospholipase A2 family protein", "refseq_ac": [ { "id": "NP_001328472", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328472", "type": "external" } ], "gene_names_uniprotkb": "PLA2-DELTA; F17A13.290", "gene_names_refseq": "F17A13.290; F17A13_290; PLA2-DELTA; phospholipase A2 delta", "protein_names_uniprotkb": "Phospholipase A2-delta; 3.1.1.4; AtsPLA2-delta; Secretory phospholipase A2-delta", "protein_names_refseq": "Phospholipase A2 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29470)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;15130548;15748654;21278126;27862469", "class_list": "", "function": "PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Releases lysophospholipids (LPLs) and free fatty acids (FFAs) from membrane phospholipids in response to hormones and other external stimuli. Plays a role in pollen development and germination and tube growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M0D6", "ec_number_list": [ { "id": "3.1.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.4", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0008289 lipid binding;GO:0004623 phospholipase A2 activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0050482 arachidonate secretion;GO:0006644 phospholipid metabolic process;GO:0009555 pollen development;GO:0009846 pollen germination", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GV50-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GW31-1", "uniprot_id": [ { "id": "DCP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GW31", "type": "external" } ], "mass": 42387.0, "length": 373, "protein_name": "mRNA-decapping enzyme subunit 2", "gene_name": "DCP2", "organism": "Arabidopsis", "refseq_name": "decapping 2", "refseq_ac": [ { "id": "NP_001190304", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190304", "type": "external" } ], "gene_names_uniprotkb": "DCP2; MSH12.3; TDT", "gene_names_refseq": "ATDCP2; DCP2; INCREASED TRANSGENE SILENCING 1; ITS1; T6I14.5; TDT; TRIDENT; decapping 2", "protein_names_uniprotkb": "mRNA-decapping enzyme subunit 2; 3.6.1.62; AtDCP2; M(7)GpppN-mRNA hydrolase DCP2; Protein DECAPPING 2; Protein TRIDENT", "protein_names_refseq": "decapping 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13570)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11910074;14593172;17158604;17485080;17513503;18025047;19855049;25561503;27862469;30833711;9405937", "class_list": "", "function": "Catalytic component of the decapping complex necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Essential for postembryonic development, especially during the formation of the shoot apical meristem (SAM)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K3Z9;Q9FNB6", "ec_number_list": [ { "id": "3.6.1.62", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.62", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0030145 manganese ion binding;GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000932 P-body", "go_biological_process": "GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA;GO:0006397 mRNA processing;GO:0009791 post-embryonic development;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0006402 mRNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8GW31-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GW44-1", "uniprot_id": [ { "id": "KN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GW44", "type": "external" } ], "mass": 51407.0, "length": 465, "protein_name": "Kinesin-like protein KIN-1", "gene_name": "KIN1", "organism": "Arabidopsis", "refseq_name": "ATP binding microtubule motor family protein", "refseq_ac": [ { "id": "NP_567148", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567148", "type": "external" } ], "gene_names_uniprotkb": "KIN1; MAA21_110; PSS1", "gene_names_refseq": "AtKin-1; AtPSS1; Kin-1; kinesin 1", "protein_names_uniprotkb": "Kinesin-like protein KIN-1; AtKIN-1; AtPSS1; Pollen semi-sterility protein 1", "protein_names_refseq": "ATP binding microtubule motor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63480)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;11472632;11910074;14593172;16448571;22038119;24667993;25330379;27862469", "class_list": "", "function": "Kinesin-like motor protein that promotes synapsis and is required for proper crossover distribution in meiosis (PubMed:25330379). Plays a role in the nuclear division cycles during megagametogenesis (PubMed:24667993)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4J114;Q8LEG9;Q9LY67", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0042803 protein homodimerization activity;GO:0016887 ATP hydrolysis activity;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005871 kinesin complex", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0007129 homologous chromosome pairing at meiosis;GO:0030705 cytoskeleton-dependent intracellular transport;GO:0009555 pollen development;GO:0009561 megagametogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GW44-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GW46-1", "uniprot_id": [ { "id": "YAB5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GW46", "type": "external" } ], "mass": 18505.0, "length": 164, "protein_name": "Axial regulator YABBY 5", "gene_name": "YAB5", "organism": "Arabidopsis", "refseq_name": "plant-specific transcription factor YABBY family protein", "refseq_ac": [ { "id": "NP_850080", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850080", "type": "external" } ], "gene_names_uniprotkb": "YAB5; T9J22.25", "gene_names_refseq": "T9J22.25; T9J22_25; YAB5; YABBY5", "protein_names_uniprotkb": "Axial regulator YABBY 5", "protein_names_refseq": "plant-specific transcription factor YABBY family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;10679447;11910074;14593172;19837869;25527103;27862469", "class_list": "", "function": "Promotes adaxial cell identity. Regulates the initiation of embryonic shoot apical meristem (SAM) development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48725", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045165 cell fate commitment;GO:0009944 polarity specification of adaxial/abaxial axis;GO:1902183 regulation of shoot apical meristem development;GO:2000024 regulation of leaf development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GW46-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GW48-1", "uniprot_id": [ { "id": "HSBP_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GW48", "type": "external" } ], "mass": 9347.0, "length": 86, "protein_name": "Heat shock factor-binding protein", "gene_name": "HSBP", "organism": "Arabidopsis", "refseq_name": "heat shock factor binding protein", "refseq_ac": [ { "id": "NP_849392", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849392", "type": "external" } ], "gene_names_uniprotkb": "HSBP; dl3940c", "gene_names_refseq": "Arabidopsis thaliana heat shock factor binding protein; AtHSBP; HSBP; heat shock factor binding protein", "protein_names_uniprotkb": "Heat shock factor-binding protein; AtHSBP", "protein_names_refseq": "heat shock factor binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15802)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617198;11910074;14593172;20388662;20657173;21768351;22440515;22631563;23111157;23328941;23660473;23776212;23820729;25561503;27862469;28011693;30833711;9461215", "class_list": "", "function": "Negative regulator of the heat shock (HS) response. Affects negatively HSFA1B DNA-binding capacity in vitro (PubMed:20388662). Involved in acquired thermotolerance but not basal thermotolerance (PubMed:20388662). Crucial for seed development, after fertilization and during embryogenesis (PubMed:20388662, PubMed:20657173)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23431", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0031072 heat shock protein binding;GO:0140297 DNA-binding transcription factor binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0009408 response to heat;GO:0070370 cellular heat acclimation;GO:0010520 regulation of reciprocal meiotic recombination;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8GW48-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GW78-1", "uniprot_id": [ { "id": "CLPT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GW78", "type": "external" } ], "mass": 26561.0, "length": 241, "protein_name": "ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic", "gene_name": "CLPT2", "organism": "Arabidopsis", "refseq_name": "Double Clp-N motif protein", "refseq_ac": [ { "id": "NP_567386", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567386", "type": "external" } ], "gene_names_uniprotkb": "CLPT2; CLPS2; F16J13.130", "gene_names_refseq": "F16J13.130; F16J13_130", "protein_names_uniprotkb": "ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic", "protein_names_refseq": "Double Clp-N motif protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G12060)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11910074;14593120;18431481;18642946;21266658;22085372;23898032;25921872;27862469", "class_list": "", "function": "Accessory protein regulating the assembly of the plastidial Clp protease system (PubMed:21266658, PubMed:25921872). CLPT1 first binds to the heptameric P-ring containing the CLP3-6 subunits followed by CLPT2, and only then does the P-ring combine with the R-ring composed of the clpP1 and CLPR1-4 subunits (PubMed:21266658). Once the core complex is fully assembled, it then associates to the CLPC chaperone partner to form the functional protease (PubMed:21266658). CLPT2 and CLPT1 are partially redundant (PubMed:25921872)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBJ1;Q9SZ71", "ec_number_list": [], "go_molecular_function": "GO:0043424 protein histidine kinase binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009532 plastid stroma;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GW78-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWA1-1", "uniprot_id": [ { "id": "NDA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWA1", "type": "external" } ], "mass": 56628.0, "length": 510, "protein_name": "Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial", "gene_name": "NDA1", "organism": "Arabidopsis", "refseq_name": "alternative NAD(P)H dehydrogenase 1", "refseq_ac": [ { "id": "NP_563783", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563783", "type": "external" } ], "gene_names_uniprotkb": "NDA1; F10K1.11; NDI1", "gene_names_refseq": "ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD (P) H DEHYDROGENASE; ATNDI1; F10K1.11; F10K1_11; NADH-DEHYDROGENASE; NDA1; alternative NAD(P)H dehydrogenase 1", "protein_names_uniprotkb": "Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial; 1.6.5.9; AtNDI1; Internal alternative NADH dehydrogenase NDA1; Internal non-phosphorylating NAD(P)H dehydrogenase 1; NADH:ubiquinone reductase (non-electrogenic) NDA1", "protein_names_refseq": "alternative NAD(P)H dehydrogenase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07180)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;11910074;12972666;14593172;14630960;15333756;15725055;16258072;18703057;23111157;27862469", "class_list": "", "function": "Alternative NADH-ubiquinone oxidoreductase which catalyzes the oxidation of mitochondrial NADH does not translocate protons across the inner mitochondrial membrane., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8L5V3;Q9LML0", "ec_number_list": [ { "id": "1.6.5.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.9", "type": "external" }, { "id": "1.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.2", "type": "external" }, { "id": "1.6.5.12", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.12", "type": "external" } ], "go_molecular_function": "GO:0003954 NADH dehydrogenase activity;GO:0016491 oxidoreductase activity;GO:0003959 NADPH dehydrogenase activity;GO:0120555 NADH dehydrogenase (ubiquinone) (non-electrogenic) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005759 mitochondrial matrix;GO:0005777 peroxisome", "go_biological_process": "GO:0071482 cellular response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8GWA1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWB7-1", "uniprot_id": [ { "id": "GUX6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWB7", "type": "external" } ], "mass": 60011.0, "length": 537, "protein_name": "Inositol phosphorylceramide glucuronosyltransferase 1", "gene_name": "IPUT1", "organism": "Arabidopsis", "refseq_name": "plant glycogenin-like starch initiation protein 6", "refseq_ac": [ { "id": "NP_197349", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197349", "type": "external" } ], "gene_names_uniprotkb": "IPUT1; PGSIP6; T28N17.3", "gene_names_refseq": "INOSITOL PHOSPHORYLCERAMIDE GLUCURONOSYLTRANSFERASE 1; IPUT1; PGSIP6; T28N17.3; plant glycogenin-like starch initiation protein 6", "protein_names_uniprotkb": "Inositol phosphorylceramide glucuronosyltransferase 1; 2.4.1.17; Glycogenin-like protein 6; Plant glycogenin-like starch initiation protein 6", "protein_names_refseq": "plant glycogenin-like starch initiation protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18480)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11910074;14593172;22706449;23499054;25122154;27643972;27862469;32407692", "class_list": "glycogene;glycosyltransferase", "function": "Mediates the transfer of glucuronic acid (GlcA) from UDP-GlcA to glycosyl inositol phosphorylceramides (GIPCs) (PubMed:25122154, PubMed:27643972). The formation of GIPCs sphingolipids is essential for pollen function, plant growth and defense (PubMed:25122154, PubMed:27643972). Required for global fitness (PubMed:27643972)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W118;W8Q2T0", "ec_number_list": [ { "id": "2.4.1.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.17", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016757 glycosyltransferase activity;GO:0015020 glucuronosyltransferase activity;GO:1990482 sphingolipid alpha-glucuronosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005797 Golgi medial cisterna", "go_biological_process": "GO:0046513 ceramide biosynthetic process;GO:0006673 inositol phosphoceramide metabolic process;GO:0009555 pollen development;GO:0010183 pollen tube guidance", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GWB7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWE0-1", "uniprot_id": [ { "id": "PP314_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWE0", "type": "external" } ], "mass": 78243.0, "length": 702, "protein_name": "Pentatricopeptide repeat-containing protein At4g16390, chloroplastic", "gene_name": "P67", "organism": "Arabidopsis", "refseq_name": "pentatricopeptide (PPR) repeat-containing protein", "refseq_ac": [ { "id": "NP_193372", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193372", "type": "external" } ], "gene_names_uniprotkb": "P67; FCAALL.354; SVR7; dl4225w", "gene_names_refseq": "DL4225W; FCAALL.354; SVR7; suppressor of variegation 7", "protein_names_uniprotkb": "Pentatricopeptide repeat-containing protein At4g16390, chloroplastic; Chloroplastic RNA-binding protein P67; Protein SUPPRESSOR OF VARIEGATION 7", "protein_names_refseq": "pentatricopeptide (PPR) repeat-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16390)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11034340;11910074;15269332;18431481;20935174;21187014;23076438;27862469;9461215", "class_list": "", "function": "Involved in chloroplast RNA processing. Can bind RNA (PubMed:11034340). Involved in chloroplast development (PubMed:21187014). Involved in chloroplast ribosomal RNA (rRNA) processing and/or translation. Required for FtsH-mediated chloroplast biogenesis (PubMed:20935174). Involved in translation and accumulation of chloroplast ATP synthase subunits (PubMed:23076438)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JLT2;O23484;Q9LF83", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0000166 nucleotide binding;GO:0042134 rRNA primary transcript binding", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0045727 positive regulation of translation;GO:0009658 chloroplast organization;GO:0031425 chloroplast RNA processing", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GWE0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWG0-1", "uniprot_id": [ { "id": "GPAT9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWG0", "type": "external" } ], "mass": 43020.0, "length": 376, "protein_name": "Glycerol-3-phosphate acyltransferase 9", "gene_name": "GPAT9", "organism": "Arabidopsis", "refseq_name": "glycerol-3-phosphate acyltransferase 9", "refseq_ac": [ { "id": "NP_568925", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568925", "type": "external" } ], "gene_names_uniprotkb": "GPAT9; MUP24.4", "gene_names_refseq": "GPAT9; MUP24.4; MUP24_4; glycerol-3-phosphate acyltransferase 9", "protein_names_uniprotkb": "Glycerol-3-phosphate acyltransferase 9; 2.3.1.15; AtGPAT9", "protein_names_refseq": "glycerol-3-phosphate acyltransferase 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60620)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11910074;14593172;16449762;19245862;19376835;19539490;21768351;23111157;24043427;24601666;26586834;27325892;27419465;27532006;27862469;29167316;30833711;9330910", "class_list": "", "function": "Essential protein. Required for male and female gametophytes development (PubMed:26586834). Exhibits sn-1 acyltransferase activity with high specificity for acyl-coenzyme A, thus triggering storage lipid biosynthesis and playing an important role in the Kennedy pathway of glycerolipid biosynthesis (PubMed:27325892). Catalyzes triacylglycerol (TAG) accumulation involved in membrane lipid and oil biosynthesis, especially in seeds (PubMed:26586834, PubMed:27325892). Also contributes to the biosynthesis of both polar lipids and TAG in developing leaves, as well as lipid droplet production in developing pollen grains. Does not seem to contribute to surface lipid biosynthesis (e.g. waxes and cutin) (PubMed:27325892)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FF57", "ec_number_list": [ { "id": "2.3.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.15", "type": "external" } ], "go_molecular_function": "GO:0004366 glycerol-3-phosphate O-acyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0006651 diacylglycerol biosynthetic process;GO:0019915 lipid storage;GO:0019432 triglyceride biosynthetic process;GO:0008654 phospholipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8GWG0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWH3-1", "uniprot_id": [ { "id": "OS9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWH3", "type": "external" } ], "mass": 32170.0, "length": 282, "protein_name": "Protein OS-9 homolog", "gene_name": "OS9", "organism": "Arabidopsis", "refseq_name": "ER lectin-like protein", "refseq_ac": [ { "id": "NP_568525", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568525", "type": "external" } ], "gene_names_uniprotkb": "OS9; EBS6; F7N22.4; T13C12.2", "gene_names_refseq": "AtOS9; F7N22.4; F7N22_4; OS9", "protein_names_uniprotkb": "Protein OS-9 homolog; AtOS9; Protein EMS-MUTAGENIZED BRI1 SUPPRESSOR 6", "protein_names_refseq": "ER lectin-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35080)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;11910074;22328055;22516478;27862469", "class_list": "", "function": "Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation. Targets the misfolded LRR receptor kinase BRI1 and the misfolded receptor-like kinase EFR., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O65221;Q8LD14", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005788 endoplasmic reticulum lumen;GO:0009536 plastid", "go_biological_process": "GO:0009651 response to salt stress;GO:0030968 endoplasmic reticulum unfolded protein response;GO:0036503 ERAD pathway;GO:0030970 retrograde protein transport, ER to cytosol", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GWH3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWT1-1", "uniprot_id": [ { "id": "GAUTE_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWT1", "type": "external" } ], "mass": 60823.0, "length": 532, "protein_name": "Probable galacturonosyltransferase 14", "gene_name": "GAUT14", "organism": "Arabidopsis", "refseq_name": "galacturonosyltransferase 14", "refseq_ac": [ { "id": "NP_197051", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197051", "type": "external" } ], "gene_names_uniprotkb": "GAUT14; T20K14.80", "gene_names_refseq": "GAUT14; T20K14.80; T20K14_80; galacturonosyltransferase 14", "protein_names_uniprotkb": "Probable galacturonosyltransferase 14; 2.4.1.-", "protein_names_refseq": "galacturonosyltransferase 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15470)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;11910074;14593172;16540543;19825675;23709340;27862469", "class_list": "glycogene;glycosyltransferase", "function": "May be involved in pectin and/or xylans biosynthesis in cell walls (By similarity). Together with GAUT13, required for pollen tube growth, possibly through the regulation of pectin biosynthesis and repartition in the pollen tube wall (PubMed:23709340)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9LF35", "ec_number_list": [], "go_molecular_function": "GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0009507 chloroplast;GO:0090406 pollen tube", "go_biological_process": "GO:0009555 pollen development;GO:0009860 pollen tube growth;GO:0052325 cell wall pectin biosynthetic process;GO:0048358 mucilage pectin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GWT1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWT4-1", "uniprot_id": [ { "id": "ANM15_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWT4", "type": "external" } ], "mass": 71870.0, "length": 642, "protein_name": "Protein arginine N-methyltransferase 1.5", "gene_name": "PMRT15", "organism": "Arabidopsis", "refseq_name": "SHK1 binding protein 1", "refseq_ac": [ { "id": "NP_194841", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194841", "type": "external" } ], "gene_names_uniprotkb": "PMRT15; F6E21.40; PMRT5; SKB1", "gene_names_refseq": "ATPRMT5; CAU1; F6E21.40; F6E21_40; PRMT5; PROTEIN ARGININE METHYLTRANSFERASE 5; SHK1 binding protein 1; SKB1; calcium underaccumulation 1", "protein_names_uniprotkb": "Protein arginine N-methyltransferase 1.5; 2.1.1.319; AtPMRT15; AtPMRT5; Shk1 kinase-binding protein 1 homolog", "protein_names_refseq": "SHK1 binding protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31120)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;17005254;17363895;20962777;27862469", "class_list": "", "function": "Methylates arginine residues of myelin basic protein (MBP) in vitro. Methylates symmetrically histone H4 of the FLC chromatin to form H4R3me2s, which in turn suppresses FLC expression to induce flowering. Regulates alternative splicing by methylating spliceosomal proteins. Involved in the post-transcriptional regulation of the circadian clock., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9M090", "ec_number_list": [ { "id": "2.1.1.319", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.319", "type": "external" } ], "go_molecular_function": "GO:0008276 protein methyltransferase activity;GO:0016274 protein-arginine N-methyltransferase activity;GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0006325 chromatin organization;GO:0032259 methylation;GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GWT4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWW6-1", "uniprot_id": [ { "id": "4MMP_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWW6", "type": "external" } ], "mass": 38506.0, "length": 342, "protein_name": "Metalloendoproteinase 4-MMP", "gene_name": "4MMP", "organism": "Arabidopsis", "refseq_name": "Matrixin family protein", "refseq_ac": [ { "id": "NP_182030", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182030", "type": "external" } ], "gene_names_uniprotkb": "4MMP; MMP1; T14P1.15", "gene_names_refseq": "T14P1.15", "protein_names_uniprotkb": "Metalloendoproteinase 4-MMP; 3.4.24.-; At4-MMP; AtMMP1; Matrix metalloproteinase 1", "protein_names_refseq": "Matrixin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45040)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10574937;10617197;11910074;14593172;24156403;27862469", "class_list": "", "function": "Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Active on myelin basic protein (MBP) and, to some extent, on McaPLGLDpaAR-NH(2) (QF24) and beta-casein (PubMed:24156403)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O65340", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0031012 extracellular matrix;GO:0098552 side of membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0030198 extracellular matrix organization;GO:0030574 collagen catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GWW6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWW8-1", "uniprot_id": [ { "id": "GFA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWW8", "type": "external" } ], "mass": 49438.0, "length": 456, "protein_name": "Chaperone protein dnaJ GFA2, mitochondrial", "gene_name": "GFA2", "organism": "Arabidopsis", "refseq_name": "gametophytic factor 2", "refseq_ac": [ { "id": "NP_568690", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568690", "type": "external" } ], "gene_names_uniprotkb": "GFA2; MDN11.11", "gene_names_refseq": "GFA2; MDN11.11; MDN11_11; gametophytic factor 2", "protein_names_uniprotkb": "Chaperone protein dnaJ GFA2, mitochondrial; AtDjA30; Chaperone protein dnaJ A30; Gametophytic factor 2", "protein_names_refseq": "gametophytic factor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48030)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10470850;11599562;11910074;12215516;27862469", "class_list": "", "function": "Chaperone that may play a role in mitochondrial protein folding. Involved in female gametophyte development. Required for cell death of the synergid cells during fertilization process, and fusion of the polar nuclei during megagametogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8A1;Q8LEU4;Q9FI35", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0051082 unfolded protein binding;GO:0031072 heat shock protein binding;GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006457 protein folding;GO:0009408 response to heat;GO:0042026 protein refolding;GO:0009553 embryo sac development;GO:0010197 polar nucleus fusion", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GWW8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GX72-1", "uniprot_id": [ { "id": "S403_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GX72", "type": "external" } ], "mass": 12517.0, "length": 106, "protein_name": "Protein S40-3", "gene_name": "S40-3", "organism": "Arabidopsis", "refseq_name": "AtS40-3", "refseq_ac": [ { "id": "NP_193633", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193633", "type": "external" } ], "gene_names_uniprotkb": "S40-3; F13C5.150", "gene_names_refseq": "AtS40-3; F13C5.150; F13C5_150", "protein_names_uniprotkb": "Protein S40-3; AtS40-3", "protein_names_refseq": "AtS40-3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18980)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11910074;14593172;20238146;27862469;29378065", "class_list": "", "function": "Regulates senescence either by modulating WRKY53 or by activating SAG12 (PubMed:20238146). Affects the natural variation of cyst nematodes sex ratio and susceptibility to parasitic nematodes, depending on single nucleotide polymorphism (SNPs) between cultivars (PubMed:29378065)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49411", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009617 response to bacterium;GO:0010468 regulation of gene expression;GO:0002215 defense response to nematode;GO:0009751 response to salicylic acid;GO:0009646 response to absence of light", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GX72-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GX78-1", "uniprot_id": [ { "id": "ANTR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GX78", "type": "external" } ], "mass": 59614.0, "length": 541, "protein_name": "Ascorbate transporter, chloroplastic", "gene_name": "4; PHT4", "organism": "Arabidopsis", "refseq_name": "Major facilitator superfamily protein", "refseq_ac": [ { "id": "NP_567175", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567175", "type": "external" } ], "gene_names_uniprotkb": "4; PHT4; ANTR2; A_IG005I10_nn; F5I10.7", "gene_names_refseq": "4; ANTR2; A_IG005I10.NN; A_IG005I10_NN; F5I10.7; F5I10_7; PHT4; anion transporter 2", "protein_names_uniprotkb": "Ascorbate transporter, chloroplastic; 4; AtPHT4; Phosphate transporter PHT4; Probable anion transporter 2", "protein_names_refseq": "Major facilitator superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11910074;14564522;14593172;18086223;18353780;19513231;25557369;27862469", "class_list": "", "function": "Inorganic phosphate and probable anion transporter (PubMed:18086223). Ascorbate transporter bridging the chloroplast envelope. Transports ascorbate from the cytosol into the chloroplast. Requires chloride ions and the presence of an electrochemical potential across the membrane for activity (PubMed:25557369)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23065", "ec_number_list": [], "go_molecular_function": "GO:0015229 L-ascorbic acid transmembrane transporter activity;GO:0005315 phosphate transmembrane transporter activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0015882 L-ascorbic acid transmembrane transport;GO:0010028 xanthophyll cycle", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8GX78-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXA1-1", "uniprot_id": [ { "id": "PME23_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXA1", "type": "external" } ], "mass": 61886.0, "length": 568, "protein_name": "Probable pectinesterase/pectinesterase inhibitor 23", "gene_name": "PME23", "organism": "Arabidopsis", "refseq_name": "Plant invertase/pectin methylesterase inhibitor superfamily", "refseq_ac": [ { "id": "NP_187339", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187339", "type": "external" } ], "gene_names_uniprotkb": "PME23; ARATH23; F3E22.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable pectinesterase/pectinesterase inhibitor 23; AtPME23; Pectin methylesterase 23; Pectin methylesterase inhibitor 23", "protein_names_refseq": "Plant invertase/pectin methylesterase inhibitor superfamily", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06830)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;11910074;15337457;16622707;27862469", "class_list": "", "function": "Acts in the modification of cell walls via demethylesterification of cell wall pectin., [UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A4FVQ5;Q9M7Y9", "ec_number_list": [ { "id": "3.1.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.11", "type": "external" }, { "id": "3.2.2.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.22", "type": "external" } ], "go_molecular_function": "GO:0030599 pectinesterase activity;GO:0046910 pectinesterase inhibitor activity", "go_cellular_component": "GO:0090406 pollen tube", "go_biological_process": "GO:0045490 pectin catabolic process;GO:0042545 cell wall modification", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GXA1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXA4-1", "uniprot_id": [ { "id": "WIP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXA4", "type": "external" } ], "mass": 53902.0, "length": 489, "protein_name": "WPP domain-interacting protein 1", "gene_name": "WIP1", "organism": "Arabidopsis", "refseq_name": "WPP domain interacting protein 1", "refseq_ac": [ { "id": "NP_001154269", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154269", "type": "external" } ], "gene_names_uniprotkb": "WIP1; M3E9.120", "gene_names_refseq": "Arabidopsis thaliana WPP domain interacting protein 1; AtWIP1; WIP1; WPP domain interacting protein 1", "protein_names_uniprotkb": "WPP domain-interacting protein 1", "protein_names_refseq": "WPP domain interacting protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26455)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;11910074;14593172;17600715;18591351;19376835;22270916;23111157;23973298;25217773;25330379;25561503;25740919;25759303;27862469;29654922;30833711", "class_list": "", "function": "Mediates and enhances the nuclear envelope docking of RANGAP proteins mediated by WIT1 and WIT2 in the undifferentiated cells of root tips (PubMed:17600715, PubMed:18591351). As component of the SUN-WIP-WIT2-KAKU1 complex, mediates the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes (PubMed:25759303)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65589", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0031965 nuclear membrane;GO:0009504 cell plate", "go_biological_process": "GO:0006997 nucleus organization", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8GXA4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXF8-1", "uniprot_id": [ { "id": "SHGR9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXF8", "type": "external" } ], "mass": 32149.0, "length": 283, "protein_name": "E3 ubiquitin-protein ligase SGR9, amyloplastic", "gene_name": "SGR9", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_195895", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195895", "type": "external" } ], "gene_names_uniprotkb": "SGR9; F9G14.60", "gene_names_refseq": "F9G14.60; F9G14_60; SGR9; SHOOT GRAVITROPISM 9", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase SGR9, amyloplastic; 2.3.2.27; Protein SHOOT GRAVITROPISM 9; RING-type E3 ubiquitin transferase SGR9", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02750)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;11910074;14593172;21602290;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Modulates amyloplast dynamics and sedimentation in statocytes during inflorescence, hypocotyl and root gravitropism, probably by regulating amyloplast interaction with actin filaments (AFs) in endodermal cells., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ10", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009501 amyloplast", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0009630 gravitropism", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GXF8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXN9-1", "uniprot_id": [ { "id": "TGH_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXN9", "type": "external" } ], "mass": 104934.0, "length": 930, "protein_name": "G patch domain-containing protein TGH", "gene_name": "TGH", "organism": "Arabidopsis", "refseq_name": "SWAP (Suppressor-of-White-APricot)/surp domain-containing protein", "refseq_ac": [ { "id": "NP_001031926", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031926", "type": "external" } ], "gene_names_uniprotkb": "TGH; MYJ24.7", "gene_names_refseq": "MYJ24.7; MYJ24_7; TGH; TOUGH", "protein_names_uniprotkb": "G patch domain-containing protein TGH; Protein TOUGH", "protein_names_refseq": "SWAP (Suppressor-of-White-APricot)/surp domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23080)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11910074;14593172;16024589;17272265;18463617;20466843;21768351;22802657;23111157;23328941;23572148;23776212;25561503;27862469;28011693;28154133;29654922;30833711;9405937", "class_list": "", "function": "Functions as a component of microRNA (miRNA) and small interfering RNA (siRNA) biogenesis. May assist DCL1 and DCL4 to efficiently process and/or recruit the precursors of miRNAs and siRNAs. In the miRNA biogenesis pathway, associates with the DCL1 complex that processes primary miRNAs (pri-miRNAs) into miRNAs. Binds pri-miRNAs and precursor miRNAs (pre-miRNAs). Is required for the interaction between pri-miRNAs and DRB1 (PubMed:22802657). Required for general proper plant growth and, in particular, initiation of vascular development. Interacts genetically with AMP1, a glutamate carboxypeptidase involved in the regulation of meristem function (PubMed:16024589)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 2, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 2, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 2, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FN46", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0070883 pre-miRNA binding;GO:0070878 primary miRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck", "go_biological_process": "GO:0006396 RNA processing;GO:0006397 mRNA processing;GO:0035196 miRNA processing;GO:0030422 siRNA processing;GO:0010087 phloem or xylem histogenesis", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q8GXN9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXR9-1", "uniprot_id": [ { "id": "NDC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXR9", "type": "external" } ], "mass": 56916.0, "length": 519, "protein_name": "Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial", "gene_name": "NDC1", "organism": "Arabidopsis", "refseq_name": "NAD(P)H dehydrogenase C1", "refseq_ac": [ { "id": "NP_568205", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568205", "type": "external" } ], "gene_names_uniprotkb": "NDC1; T2K12.12; T2K12_90", "gene_names_refseq": "NAD(P)H dehydrogenase C1; NDC1", "protein_names_uniprotkb": "Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial; 1.6.5.12; 1.6.5.9; Alternative NADH dehydrogenase NDC1; Demethylphylloquinone reductase NDC1; NADH:ubiquinone reductase (non-electrogenic) NDC1", "protein_names_refseq": "NAD(P)H dehydrogenase C1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08740)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130714;11910074;12972666;14593172;15333756;15725055;16258072;16461379;18703057;21844348;22274653;23841539;25018761;26023160;27862469", "class_list": "", "function": "Bifunctional oxidoreductase ables to act both on prenyl naphthoquinones and on prenyl benzoquinones (PubMed:21844348, PubMed:26023160). May serve a respiratory function (PubMed:12972666). Involved in an electron flow toward the plastoglobule plastoquinone pool (PubMed:21844348, PubMed:25018761). Required for plastochromanol-8 accumulation and for phylloquinone (vitamin K1) production (PubMed:21844348, PubMed:25018761). Probably not directly involved in cyclic or chlororespiratory electron flows under standard growth conditions, but participates in the redox metabolism of plastoquinone-9 and the tocophrol recycling-intermediate alpha-tocopherol quinone (PubMed:21844348, PubMed:25018761). Catalyzes the penultimate step in the biosynthesis of vitamin K1 (PubMed:26023160)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KCG9;Q6KC19;Q93ZN8;Q9C5A3", "ec_number_list": [ { "id": "1.6.5.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.9", "type": "external" }, { "id": "1.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.2", "type": "external" }, { "id": "1.6.5.12", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.12", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0003955 NAD(P)H dehydrogenase (quinone) activity;GO:0120555 NADH dehydrogenase (ubiquinone) (non-electrogenic) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005886 plasma membrane;GO:0009505 plant-type cell wall;GO:0009507 chloroplast", "go_biological_process": "GO:0019646 aerobic electron transport chain;GO:0071482 cellular response to light stimulus;GO:0042372 phylloquinone biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8GXR9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXU8-1", "uniprot_id": [ { "id": "LPAT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXU8", "type": "external" } ], "mass": 39395.0, "length": 356, "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase LPAT1, chloroplastic", "gene_name": "LPAT1", "organism": "Arabidopsis", "refseq_name": "Phospholipid/glycerol acyltransferase family protein", "refseq_ac": [ { "id": "NP_194787", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194787", "type": "external" } ], "gene_names_uniprotkb": "LPAT1; ATS2; EMB1995; F17I23.80; LPAAT1", "gene_names_refseq": "ATS2; EMB1995; EMBRYO DEFECTIVE 1995; F17I23.80; F17I23_80; LPAT1; PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE; lysophosphatidic acid acyltransferase 1", "protein_names_uniprotkb": "1-acyl-sn-glycerol-3-phosphate acyltransferase LPAT1, chloroplastic; 2.3.1.51; 2.3.1.n4; Lysophosphatidyl acyltransferase 1; Protein EMBRYO DEFECTIVE 1995", "protein_names_refseq": "Phospholipid/glycerol acyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30580)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11910074;14593172;14976237;15169931;20488893;26224803;27862469", "class_list": "", "function": "Plastidial enzyme of the prokaryotic glycerol-3-phosphate pathway that converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at position sn-2 (PubMed:15169931). Utilizes palmitoyl-ACP (16:0-ACP) to produce phosphatidic acid containing a saturated group at position sn-2, which is characteristic of lipids synthesized by the prokaryotic pathway (PubMed:15169931). In vitro, can use 16:0-CoA as acyl donor (PubMed:14976237). Essential for embryo development during the transition from the globular to the heart stage when chloroplasts begin to form (PubMed:14976237, PubMed:15169931)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M0A2", "ec_number_list": [ { "id": "2.3.1.51", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.51", "type": "external" }, { "id": "2.3.1.n4", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n4", "type": "external" }, { "id": "2.3.1.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.23", "type": "external" }, { "id": "2.3.1.n6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n6", "type": "external" }, { "id": "2.3.1.n7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n7", "type": "external" } ], "go_molecular_function": "GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006654 phosphatidic acid biosynthetic process;GO:0006655 phosphatidylglycerol biosynthetic process;GO:0016024 CDP-diacylglycerol biosynthetic process;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GXU8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GXV5-1", "uniprot_id": [ { "id": "UGHY_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GXV5", "type": "external" } ], "mass": 33673.0, "length": 298, "protein_name": "(S)-ureidoglycine aminohydrolase", "gene_name": "UGLYAH", "organism": "Arabidopsis", "refseq_name": "ureidoglycine aminohydrolase", "refseq_ac": [ { "id": "NP_193438", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193438", "type": "external" } ], "gene_names_uniprotkb": "UGLYAH; FCAALL.343; UGHY; YlbA; dl4555w", "gene_names_refseq": "DL4555W; FCAALL.343; UGLYAH; ureidoglycine aminohydrolase", "protein_names_uniprotkb": "(S)-ureidoglycine aminohydrolase; 3.5.3.26; AtUGLYAH", "protein_names_refseq": "ureidoglycine aminohydrolase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G17050)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11910074;19935661;20038185;22074104;22493446;27862469;9461215", "class_list": "", "function": "Involved in the catabolism of purine nucleotides. Can use (S)-2-ureidoglycine as substrate, but not allantoate. The sequential activity of AAH, UGLYAH and UAH allows a complete purine breakdown without the intermediate generation of urea., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23549;Q67XN1;Q680J5", "ec_number_list": [ { "id": "3.5.3.26", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.3.26", "type": "external" } ], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046872 metal ion binding;GO:0071522 ureidoglycine aminohydrolase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005829 cytosol", "go_biological_process": "GO:0006145 purine nucleobase catabolic process;GO:0006355 regulation of DNA-templated transcription;GO:0000256 allantoin catabolic process;GO:0010136 ureide catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GXV5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GY61-1", "uniprot_id": [ { "id": "BH063_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GY61", "type": "external" } ], "mass": 37540.0, "length": 335, "protein_name": "Transcription factor bHLH63", "gene_name": "BHLH63", "organism": "Arabidopsis", "refseq_name": "cryptochrome-interacting basic-helix-loop-helix 1", "refseq_ac": [ { "id": "NP_195179", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195179", "type": "external" } ], "gene_names_uniprotkb": "BHLH63; CIB1; EN84; T4L20.110", "gene_names_refseq": "CIB1; T4L20.110; T4L20_110; cryptochrome-interacting basic-helix-loop-helix 1", "protein_names_uniprotkb": "Transcription factor bHLH63; AtbHLH63; Basic helix-loop-helix protein 63; Protein CRYPTOCHROME INTERACTING BASIC-HELIX-LOOP-HELIX 1; Transcription factor EN 84; bHLH 63; bHLH transcription factor bHLH063", "protein_names_refseq": "cryptochrome-interacting basic-helix-loop-helix 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34530)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617198;11910074;12679534;12897250;14593172;14600211;18988809;22847441;23161888;24101505;24130508;24718798;24780222;25963241;27862469", "class_list": "", "function": "Transcription factor that binds DNA to G box 5'-CACGTG-3' and, to a lower extent, to E-box 5'-CANNTG-3' in vitro. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65678;Q8L851;Q8S3D9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045824 negative regulation of innate immune response;GO:0009637 response to blue light;GO:0009908 flower development;GO:0009911 positive regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8GY61-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYB1-1", "uniprot_id": [ { "id": "NUD15_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYB1", "type": "external" } ], "mass": 31898.0, "length": 285, "protein_name": "Nudix hydrolase 15, mitochondrial", "gene_name": "NUDT15", "organism": "Arabidopsis", "refseq_name": "nudix hydrolase homolog 15", "refseq_ac": [ { "id": "NP_001031104", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031104", "type": "external" } ], "gene_names_uniprotkb": "NUDT15; F1K23.16; F1K23.5; NUDX15", "gene_names_refseq": "ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15; ATNUDT15; ATNUDX15; F1K23.5; F1K23_5; NUDX15; nudix hydrolase homolog 15", "protein_names_uniprotkb": "Nudix hydrolase 15, mitochondrial; 3.6.1.-; AtNUDT15; Coenzyme A diphosphatase NUDT15", "protein_names_refseq": "nudix hydrolase homolog 15", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28960)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11910074;15878881;18815383;19423640;22223895;27862469", "class_list": "", "function": "Coenzyme A diphosphatase which mediates the cleavage of oxidized CoA. Can use malonyl-CoA, hexanoyl-CoA, lauroyl-CoA, myristoyl-CoA and palmitoyl-CoA as substrates, but not isobutyryl-CoA or propionyl-CoA., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WKX6;Q3E701;Q3E702;Q67YK3;Q9SHQ7", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity;GO:0010945 coenzyme A diphosphatase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006104 succinyl-CoA metabolic process;GO:0015937 coenzyme A biosynthetic process;GO:0015938 coenzyme A catabolic process;GO:0006753 nucleoside phosphate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GYB1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYB8-1", "uniprot_id": [ { "id": "OPR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYB8", "type": "external" } ], "mass": 41567.0, "length": 374, "protein_name": "12-oxophytodienoate reductase 2", "gene_name": "OPR2", "organism": "Arabidopsis", "refseq_name": "12-oxophytodienoate reductase 2", "refseq_ac": [ { "id": "NP_177795", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177795", "type": "external" } ], "gene_names_uniprotkb": "OPR2; F28O16.6", "gene_names_refseq": "12-OXOPHYTODIENOATE REDUCTASE 2; 12-oxophytodienoate reductase 2; ARABIDOPSIS 12-OXOPHYTODIENOATE REDUCTASE 2; ATOPR2; F28O16.6; F28O16_6; OPR2", "protein_names_uniprotkb": "12-oxophytodienoate reductase 2; 1.3.1.-; 1.3.1.42; 12-oxophytodienoate-10,11-reductase 2; 4,5-didehydrojasmonate reductase; AtOPR2; OPDA-reductase 2", "protein_names_refseq": "12-oxophytodienoate reductase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G76690)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10333582;10872231;11130712;11910074;12445129;15923336;19605548;22223895;27862469;29291349", "class_list": "", "function": "Specifically cleaves olefinic bonds in alpha,beta-unsaturated carbonyls and may be involved in detoxification or modification of these reactive compounds (Probable). May be involved in the biosynthesis or metabolism of oxylipin signaling molecules (Probable) (PubMed:10872231). In vitro, reduces 9R,13R-12-oxophytodienoic acid (9R,13R-OPDA) to 9R,13R-OPC-8:0, but only poorly 9S,13S-OPDA, the natural precursor of jasmonic acid (JA) (PubMed:10872231). Can detoxify the explosive 2,4,6-trinitrotoluene (TNT) in vitro and in vivo by catalyzing its nitroreduction to form hydroxylamino-dinitrotoluene (HADNT) (PubMed:19605548). Functions in an alternative and OPR3-independent pathway for JA biosynthesis (PubMed:29291349). Catalyzes the NADPH-dependent reduction of 4,5-didehydrojasmonates to jasmonates (PubMed:29291349)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LYX5;Q9ZR80", "ec_number_list": [ { "id": "1.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.-", "type": "external" }, { "id": "1.3.1.42", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.42", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0010181 FMN binding;GO:0016629 12-oxophytodienoate reductase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0009611 response to wounding;GO:0031408 oxylipin biosynthetic process;GO:0009695 jasmonic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GYB8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYC1-1", "uniprot_id": [ { "id": "IDD4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYC1", "type": "external" } ], "mass": 55794.0, "length": 516, "protein_name": "Protein indeterminate-domain 4, chloroplastic", "gene_name": "IDD4", "organism": "Arabidopsis", "refseq_name": "indeterminate(ID)-domain 4", "refseq_ac": [ { "id": "NP_001118254", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118254", "type": "external" } ], "gene_names_uniprotkb": "IDD4; F5O4.15", "gene_names_refseq": "AtIDD4; F5O4.15; F5O4_15; IDD4; indeterminate(ID)-domain 4", "protein_names_uniprotkb": "Protein indeterminate-domain 4, chloroplastic", "protein_names_refseq": "indeterminate(ID)-domain 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02080)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617197;11910074;14593172;16784536;16934950;17933900;19376835;19726569;21768351;23111157;23572148;23660473;23776212;24821766;26091701;27862469;28011693;30677094", "class_list": "", "function": "Transcription factor that may act a transcriptional activator of nuclear-encoded photosynthetic gene expression (Probable). Binds DNA via its zinc fingers (PubMed:24821766). Recognizes and binds to SCL3 promoter sequence 5'-AGACAA-3' to promote its expression when in complex with RGA (PubMed:24821766)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZUL4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0002221 pattern recognition receptor signaling pathway;GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0008356 asymmetric cell division;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8GYC1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYH7-1", "uniprot_id": [ { "id": "NSE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYH7", "type": "external" } ], "mass": 27717.0, "length": 249, "protein_name": "E3 SUMO-protein ligase MMS21", "gene_name": "MMS21", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_188133", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188133", "type": "external" } ], "gene_names_uniprotkb": "MMS21; F4B12.6; HPY2", "gene_names_refseq": "A. THALIANA METHYL METHANE SULFONATE SENSITIVITY 21; ATMMS21; HIGH PLOIDY2; HPY2; METHYL METHANE SULFONATE SENSITIVITY 2; MMS21", "protein_names_uniprotkb": "E3 SUMO-protein ligase MMS21; 2.3.2.-; AtMMS21; E3 SUMO-protein transferase MMS21; MMS21 homolog; Protein HIGH PLOIDY 2", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G15150)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10907853;11910074;19666737;19682286;22223895;27862469", "class_list": "", "function": "E3 SUMO-protein ligase that modulates cell cycle progression and functions as a repressor of endocycle onset in meristems. May function downstream of the meristem patterning transcription factors PLETHORA 1 and 2 (PLT1 and PLT2) in root meristem development. Modulates the expression of the mitotic cyclins CYCB1-1 and CYCB1-2 and cyclin-dependent kinases CDKB1-1 and CDKB2-1 in root meristem. Involved in cytokinin signaling in root development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LIM0", "ec_number_list": [], "go_molecular_function": "GO:0061665 SUMO ligase activity;GO:0008270 zinc ion binding;GO:0019789 SUMO transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0030915 Smc5-Smc6 complex", "go_biological_process": "GO:0008284 positive regulation of cell population proliferation;GO:0016925 protein sumoylation;GO:0045931 positive regulation of mitotic cell cycle;GO:0006974 DNA damage response;GO:0000724 double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GYH7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYM3-1", "uniprot_id": [ { "id": "AUG4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYM3", "type": "external" } ], "mass": 47770.0, "length": 423, "protein_name": "AUGMIN subunit 4", "gene_name": "AUG4", "organism": "Arabidopsis", "refseq_name": "HAUS augmin-like complex subunit", "refseq_ac": [ { "id": "NP_175486", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175486", "type": "external" } ], "gene_names_uniprotkb": "AUG4; F17J6.23; F4M15.6", "gene_names_refseq": "AUG4; F17J6.23; F17J6_23; augmin subunit 4", "protein_names_uniprotkb": "AUGMIN subunit 4", "protein_names_refseq": "HAUS augmin-like complex subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50710)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11910074;14593172;22505726;27862469", "class_list": "", "function": "Involved in microtubules reorganization during spindle and phragmoplast development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6P2;Q9C6T4", "ec_number_list": [], "go_molecular_function": "GO:0051011 microtubule minus-end binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005876 spindle microtubule;GO:0070652 HAUS complex;GO:0009524 phragmoplast", "go_biological_process": "GO:0051301 cell division;GO:0051225 spindle assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8GYM3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYP5-1", "uniprot_id": [ { "id": "MYB60_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYP5", "type": "external" } ], "mass": 32017.0, "length": 280, "protein_name": "Transcription factor MYB60", "gene_name": "MYB60", "organism": "Arabidopsis", "refseq_name": "myb domain protein 60", "refseq_ac": [ { "id": "NP_001318958", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318958", "type": "external" } ], "gene_names_uniprotkb": "MYB60; F22O13.30", "gene_names_refseq": "AtMYB60; F22O13.30; F22O13_30; MYB60; myb domain protein 60", "protein_names_uniprotkb": "Transcription factor MYB60; AtMYB60; Myb domain protein 60", "protein_names_refseq": "myb domain protein 60", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08810)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;11597504;11910074;14593172;16005291;16463103;18036199;18317777;21637967;22088138;23453954;23828545;27862469;9839469", "class_list": "", "function": "Transcription factor involved in the regulation of gene (e.g. drought-regulated and flavonoid biosynthetic genes) expression and stomatal movements leading to negative regulation of responses to drought and responses to other physiological stimuli (e.g. light) (PubMed:16005291, PubMed:21637967). Promotes guard cell deflation in response to water deficit. Triggers root growth upon osmotic stress (e.g. mannitol containing medium) (PubMed:21637967)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "D2CFP9;Q3E6Y6;Q9FRQ8;Q9SBG0", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0009411 response to UV;GO:0009414 response to water deprivation;GO:0009744 response to sucrose", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8GYP5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYX0-1", "uniprot_id": [ { "id": "MOB1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYX0", "type": "external" } ], "mass": 24668.0, "length": 215, "protein_name": "MOB kinase activator-like 1B", "gene_name": "MOB1B", "organism": "Arabidopsis", "refseq_name": "Mob1/phocein family protein", "refseq_ac": [ { "id": "NP_001154253", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154253", "type": "external" } ], "gene_names_uniprotkb": "MOB1B; F13C5.220; T18B16.1", "gene_names_refseq": "", "protein_names_uniprotkb": "MOB kinase activator-like 1B; Mob1 homolog 1B; Mps one binder kinase activator-like 1B", "protein_names_refseq": "Mob1/phocein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19045)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;11910074;14593172;19253305;19468312;22631563;23111157;23328941;23572148;24043427;24201137;25561503;26091701;26685188;27862469;28011693;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O50052", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030295 protein kinase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0007165 signal transduction;GO:0008283 cell population proliferation;GO:0080141 regulation of jasmonic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8GYX0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYY1-1", "uniprot_id": [ { "id": "HSFA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYY1", "type": "external" } ], "mass": 46458.0, "length": 412, "protein_name": "Heat stress transcription factor A-3", "gene_name": "HSFA3", "organism": "Arabidopsis", "refseq_name": "heat shock transcription factor A3", "refseq_ac": [ { "id": "NP_001318473", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318473", "type": "external" } ], "gene_names_uniprotkb": "HSFA3; F17C15.140; HSF17", "gene_names_refseq": "ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A3; AT-HSFA3; F17C15.140; F17C15_140; HSFA3; heat shock transcription factor A3", "protein_names_uniprotkb": "Heat stress transcription factor A-3; AtHsf-17; AtHsfA3", "protein_names_refseq": "heat shock transcription factor A3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03720)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11599559;11910074;17999647;18261981;18407058;27862469;30833711", "class_list": "", "function": "Transcriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). Involved in heat stress response. Activated by DREB2A under heat stress., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZR6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0034605 cellular response to heat;GO:0009408 response to heat", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GYY1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZ29-1", "uniprot_id": [ { "id": "GH315_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZ29", "type": "external" } ], "mass": 66979.0, "length": 595, "protein_name": "Indole-3-acetic acid-amido synthetase GH3.15", "gene_name": "GH3.15", "organism": "Arabidopsis", "refseq_name": "Auxin-responsive GH3 family protein", "refseq_ac": [ { "id": "NP_196841", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196841", "type": "external" } ], "gene_names_uniprotkb": "GH3.15; T22N19.20", "gene_names_refseq": "T22N19.20; T22N19_20", "protein_names_uniprotkb": "Indole-3-acetic acid-amido synthetase GH3.15; 6.3.2.-; AtGH3-15; Auxin-responsive GH3-like protein 15; Protein GRETCHEN HAGEN 3.15", "protein_names_refseq": "Auxin-responsive GH3 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13370)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;11910074;12036261;14593172;27862469;29462792;30315112", "class_list": "", "function": "Indole-3-acetic acid-amido (IAA) synthetase that catalyzes the conjugation of amino acids to auxin specifically using the auxin precursor indole-3-butyric acid (IBA) and glutamine and, possibly, cysteine as substrates (PubMed:29462792, PubMed:30315112). Displays high catalytic activity with the auxinic phenoxyalkanoic acid herbicides 4-(2,4-dichlorophenoxy)butyric acid (2,4-DB) and to some extent 2,4-dichlorophenoxylacetic acid (2,4-D) as substrates, thus conferring resistance to herbicides (PubMed:30315112)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LYR9", "ec_number_list": [ { "id": "6.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.2.-", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016881 acid-amino acid ligase activity;GO:0070406 glutamine binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0010249 auxin conjugate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GZ29-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZ99-1", "uniprot_id": [ { "id": "HPCA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZ99", "type": "external" } ], "mass": 104708.0, "length": 953, "protein_name": "Leucine-rich repeat receptor protein kinase HPCA1", "gene_name": "HPCA1", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": [ { "id": "NP_199787", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199787", "type": "external" } ], "gene_names_uniprotkb": "HPCA1; K2I5", "gene_names_refseq": "K2I5.13; K2I5_13", "protein_names_uniprotkb": "Leucine-rich repeat receptor protein kinase HPCA1; 2.7.11.1; Protein HYDROGEN-PEROXIDE-INDUCED CALCIUM INCREASES 1", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49760)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11910074;14593172;17317660;18686298;19376835;20064227;23111157;23328941;23572148;23776212;25561503;26091701;27862469;28011693;32076270", "class_list": "", "function": "Leucine-rich repeat receptor protein kinase that acts as sensor of extracellular hydrogen peroxide (PubMed:32076270). Required for intracellular calcium influx in response to extracellular hydrogen peroxide (PubMed:32076270). Mediates hydrogen peroxide-induced activation of calcium channels in guard cells and is required for stomatal closure (PubMed:32076270)., [UniProtKB, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 3, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 3, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 3, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 23, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0000325 plant-type vacuole;GO:0009536 plastid", "go_biological_process": "GO:0009593 detection of chemical stimulus;GO:0046777 protein autophosphorylation;GO:0090333 regulation of stomatal closure", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8GZ99-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.1000000010001.101.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZQ3-1", "uniprot_id": [ { "id": "PNP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZQ3", "type": "external" } ], "mass": 99566.0, "length": 922, "protein_name": "Polyribonucleotide nucleotidyltransferase 1, chloroplastic", "gene_name": "PNP1", "organism": "Arabidopsis", "refseq_name": "polyribonucleotide nucleotidyltransferase", "refseq_ac": [ { "id": "NP_187021", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187021", "type": "external" } ], "gene_names_uniprotkb": "PNP1; F20H23.26; PDE326; RIF10; T12J13.1", "gene_names_refseq": "F20H23.26; PDE326; PIGMENT DEFECTIVE 326; PNP; POLYNUCLEOTIDE PHOSPHORYLASE; RIF10; resistant to inhibition with FSM 10", "protein_names_uniprotkb": "Polyribonucleotide nucleotidyltransferase 1, chloroplastic; 2.7.7.8; AtcpPNPase; PNPase 1; Polynucleotide phosphorylase 1; Protein PIGMENT DEFECTIVE 326; Protein RESISTANT TO INHIBITION WITH FSM 10", "protein_names_refseq": "polyribonucleotide nucleotidyltransferase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G03710)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;12486011;16531478;18469163;19376835;19710229;21466602;21768351;22384367;23660473;23776212;25561503;27862469;30833711", "class_list": "", "function": "Involved in the metabolism of all major classes of plastid RNAs. Required for efficient 3'-end processing of mRNAs and 3'-end maturation of rRNA transcripts, but is not sufficient to mediate their degradation. Mediates tRNA degradation. May function as a poly(A) mRNA 3'-5' degrading phosphorylase. May be required for plastid ribosome assembly and non-coding RNA biogenesis and accumulation. Seems not required for efficient translation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M497;Q9S749", "ec_number_list": [ { "id": "2.7.7.8", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.8", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0000175 3'-5'-RNA exonuclease activity;GO:0004654 polyribonucleotide nucleotidyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006397 mRNA processing;GO:0008033 tRNA processing;GO:0006364 rRNA processing;GO:0000965 mitochondrial RNA 3'-end processing;GO:0006401 RNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8GZQ3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0T9-1", "uniprot_id": [ { "id": "KTN84_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0T9", "type": "external" } ], "mass": 91434.0, "length": 837, "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4", "gene_name": "KTN80.4", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": [ { "id": "NP_001318628", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318628", "type": "external" } ], "gene_names_uniprotkb": "KTN80.4; K19M13.6", "gene_names_refseq": "K19M13.6; K19M13_6", "protein_names_uniprotkb": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23430)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10470850;14593172;18223036;18552200;23111157;23776212;25561503;27862469;28154133;28978669", "class_list": "", "function": "May participate in a complex which severs microtubules in an ATP-dependent manner (By similarity). This activity may promote rapid reorganization of cellular microtubule arrays (By similarity). Confers precision to microtubule (MT) severing by specific targeting of KTN1 to MT cleavage sites such as crossover or branching nucleation sites (PubMed:28978669). Together with other KTN80s, regulates cell elongation by modulating MT organization (PubMed:28978669)., [UniProtKB, HAMAP, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 5, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 5, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 5, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "Q9FHL5", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0008352 katanin complex;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0015630 microtubule cytoskeleton;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0051013 microtubule severing;GO:0007019 microtubule depolymerization;GO:0051510 regulation of unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8H0T9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0U4-1", "uniprot_id": [ { "id": "TNPO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0U4", "type": "external" } ], "mass": 99109.0, "length": 891, "protein_name": "Transportin-1", "gene_name": "TRN1", "organism": "Arabidopsis", "refseq_name": "transportin 1", "refseq_ac": [ { "id": "NP_001031359", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031359", "type": "external" } ], "gene_names_uniprotkb": "TRN1; F12A24.13", "gene_names_refseq": "ATTRN1; F12A24.13; F12A24_13; TRANSPORTIN 1; TRN1; transportin 1", "protein_names_uniprotkb": "Transportin-1; AtTRN1; Importin beta-2; Karyopherin beta-2", "protein_names_refseq": "transportin 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G16950)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617197;14523572;14593172;14756317;17272265;19245862;20466843;21556326;22223895;23328941;23572148;23776212;26091701;27862469;30833711", "class_list": "", "function": "Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus (By similarity). Involved in nuclear import of M9-containing proteins. In vitro, binds directly to the M9 region of the glycine-rich RNA-binding RBG7 and mediates its nuclear import., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4ILE2;Q8H2D6;Q9ZVW8", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding;GO:0008139 nuclear localization sequence binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm", "go_biological_process": "GO:0051170 import into nucleus;GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8H0U4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0U5-1", "uniprot_id": [ { "id": "TIC62_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0U5", "type": "external" } ], "mass": 68342.0, "length": 641, "protein_name": "Protein TIC 62, chloroplastic", "gene_name": "TIC62", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": [ { "id": "NP_188519", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188519", "type": "external" } ], "gene_names_uniprotkb": "TIC62; MCB22.6", "gene_names_refseq": "AtTic62; Tic62; translocon at the inner envelope membrane of chloroplasts 62", "protein_names_uniprotkb": "Protein TIC 62, chloroplastic; AtTIC62; Translocon at the inner envelope membrane of chloroplasts 62", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18890)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10907853;12426385;14593172;15033972;17374152;19376835;20040542;20100520;20934402;22223895;25561503;26941088;27862469", "class_list": "", "function": "Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62 (PubMed:12426385). Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9LHN0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8H0U5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0U8-1", "uniprot_id": [ { "id": "RH42_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0U8", "type": "external" } ], "mass": 133033.0, "length": 1166, "protein_name": "DEAD-box ATP-dependent RNA helicase 42", "gene_name": "RH42", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001077571", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077571", "type": "external" } ], "gene_names_uniprotkb": "RH42; F9H16.10; RCF1", "gene_names_refseq": "F9H16.10; F9H16_10; RCF1; regulator of CBF gene expression 1", "protein_names_uniprotkb": "DEAD-box ATP-dependent RNA helicase 42; 3.6.4.13; DEAD-box RNA helicase RCF1; REGULATOR OF CBF GENE EXPRESSION 1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20920)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130712;14593172;17168887;18463617;19376835;20466843;21768351;23111157;23328941;23371945;23572148;23660473;23776212;24265739;25561503;26091701;26187819;27862469;30833711", "class_list": "", "function": "Helicase required for pre-mRNA splicing, cold-responsive gene regulation and cold tolerance., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 16, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQH2;Q9SYP6", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0060090 molecular adaptor activity;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0035196 miRNA processing;GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8H0U8-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0V5-1", "uniprot_id": [ { "id": "OCP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0V5", "type": "external" } ], "mass": 39112.0, "length": 354, "protein_name": "Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3", "gene_name": "OCP3", "organism": "Arabidopsis", "refseq_name": "overexpressor of cationic peroxidase 3", "refseq_ac": [ { "id": "NP_196688", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196688", "type": "external" } ], "gene_names_uniprotkb": "OCP3; F2I11.160", "gene_names_refseq": "F2I11.160; F2I11_160; OCP3; overexpressor of cationic peroxidase 3", "protein_names_uniprotkb": "Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3", "protein_names_refseq": "overexpressor of cationic peroxidase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11270)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;14593172;15923348;19175769;20466843;20836879;21564353;23572148;26091701;27862469", "class_list": "", "function": "May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Homeodomain transcription factor that mediates jasmonic acid (JA)-mediated COI1-dependent and abscisic acid (ABA)-mediated PMR4-dependent resistance to infection by necrotrophic fungal pathogens (e.g. B.cinerea and P.cucumerina) and bacterial pathogens (e.g. P.syringae DC3000); this resistance involves at least callose deposition (PubMed:15923348, PubMed:20836879, PubMed:21564353). Required for the P.fluorescens WCS417r-triggered JA-dependent induced systemic resistance (ISR) against both P.syringae DC3000 and H.arabidopsidis (PubMed:20836879). Negative regulator of the ABA-dependent drought resistance (PubMed:19175769)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFN0", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0004601 peroxidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0006952 defense response;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation;GO:0009620 response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8H0V5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0W0-1", "uniprot_id": [ { "id": "LPA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0W0", "type": "external" } ], "mass": 40029.0, "length": 358, "protein_name": "Protein LPA3", "gene_name": "LPA3", "organism": "Arabidopsis", "refseq_name": "Low PSII Accumulation 3", "refseq_ac": [ { "id": "NP_565054", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565054", "type": "external" } ], "gene_names_uniprotkb": "LPA3; F3N23.26", "gene_names_refseq": "F3N23.26; F3N23_26; LPA3; Low PSII Accumulation 3", "protein_names_uniprotkb": "Protein LPA3; Protein LOW PSII ACCUMULATION 3, chloroplastic", "protein_names_refseq": "Low PSII Accumulation 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G73060)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;20605914;22060019;22223895;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFG2;Q9SSM1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H0W0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H0W2-1", "uniprot_id": [ { "id": "HDA9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H0W2", "type": "external" } ], "mass": 48688.0, "length": 426, "protein_name": "Histone deacetylase 9", "gene_name": "HDA9", "organism": "Arabidopsis", "refseq_name": "histone deacetylase 9", "refseq_ac": [ { "id": "NP_190054", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190054", "type": "external" } ], "gene_names_uniprotkb": "HDA9; HDAC9; T18B22.80", "gene_names_refseq": "AtHDA9; HDA09; HDA9; HISTONE DEACETYLASE; histone deacetylase 9", "protein_names_uniprotkb": "Histone deacetylase 9; 3.5.1.98; AtHDAC9", "protein_names_refseq": "histone deacetylase 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G44680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12466527;14593172;22442143;27862469;28663238", "class_list": "", "function": "Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M1N6", "ec_number_list": [ { "id": "3.5.1.98", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.98", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding;GO:0004407 histone deacetylase activity;GO:0141221 histone deacetylase activity, hydrolytic mechanism", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0040029 epigenetic regulation of gene expression;GO:0010187 negative regulation of seed germination;GO:1900055 regulation of leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H0W2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H103-1", "uniprot_id": [ { "id": "G6PIP_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H103", "type": "external" } ], "mass": 67048.0, "length": 613, "protein_name": "Glucose-6-phosphate isomerase 1, chloroplastic", "gene_name": "PGI1", "organism": "Arabidopsis", "refseq_name": "phosphoglucose isomerase 1", "refseq_ac": [ { "id": "NP_001078444", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078444", "type": "external" } ], "gene_names_uniprotkb": "PGI1; F22K18.180; pgi2; pgi3", "gene_names_refseq": "F22K18.180; F22K18_180; PGI1; PGI; PHOSPHO-GLC ISOMERASE; PHOSPHOGLUCOSE ISOMERASE PRECURSOR; phosphoglucose isomerase 1", "protein_names_uniprotkb": "Glucose-6-phosphate isomerase 1, chloroplastic; 5.3.1.9; GPI 1; PGI 1; PHI; Phosphoglucose isomerase 1; Phosphohexose isomerase", "protein_names_refseq": "phosphoglucose isomerase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24620)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617198;10806248;14593172;18431481;18433157;18463617;18599644;19376835;20466843;21768351;23111157;23660473;23776212;25561503;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Promotes the synthesis of starch in leaves., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MR16;Q9SB57;Q9SEJ5", "ec_number_list": [ { "id": "5.3.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:5.3.1.9", "type": "external" } ], "go_molecular_function": "GO:0004347 glucose-6-phosphate isomerase activity;GO:0097367 carbohydrate derivative binding;GO:0048029 monosaccharide binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006094 gluconeogenesis;GO:0006096 glycolytic process;GO:0051156 glucose 6-phosphate metabolic process;GO:0005982 starch metabolic process;GO:0009911 positive regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8H103-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H106-1", "uniprot_id": [ { "id": "PTN2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H106", "type": "external" } ], "mass": 70073.0, "length": 632, "protein_name": "Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2B", "gene_name": "PTEN2B", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PTEN2B; F3A4.190; PTEN3", "gene_names_refseq": "", "protein_names_uniprotkb": "Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2B; 3.1.3.48; 3.1.3.67; AtPTEN2b; AtPTEN3; Protein PHOSPHATASE AND TENSIN HOMOLOG 2-b", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50110)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;12368500;14593172;21864294;23776212;26091701;26187819;27862469", "class_list": "", "function": "Protein tyrosine phosphatase that also exhibits a weak lipid phosphatase activity towards PtdIns(3)P., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SN07", "ec_number_list": [ { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "1.20.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.1", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" } ], "go_molecular_function": "GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity;GO:0052866 phosphatidylinositol phosphate phosphatase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0006970 response to osmotic stress;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8H106-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H107-1", "uniprot_id": [ { "id": "ODO2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H107", "type": "external" } ], "mass": 50059.0, "length": 464, "protein_name": "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial", "gene_name": "F10M23.250", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F10M23.250", "gene_names_refseq": "", "protein_names_uniprotkb": "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial; 2-oxoglutarate dehydrogenase complex component E2-2; 2.3.1.61; Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2; E2K-2; OGDC-E2-2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26910)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;14671022;19423640;25732537;27862469;28011693", "class_list": "", "function": "The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q3E9W2;Q8LGI7;Q9SZ31", "ec_number_list": [ { "id": "2.3.1.61", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.61", "type": "external" } ], "go_molecular_function": "GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0045252 oxoglutarate dehydrogenase complex", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0033512 L-lysine catabolic process to acetyl-CoA via saccharopine", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8H107-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H110-1", "uniprot_id": [ { "id": "XCT_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H110", "type": "external" } ], "mass": 39240.0, "length": 337, "protein_name": "Protein XAP5 CIRCADIAN TIMEKEEPER", "gene_name": "XCT", "organism": "Arabidopsis", "refseq_name": "XAP5 family protein", "refseq_ac": [ { "id": "NP_179711", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179711", "type": "external" } ], "gene_names_uniprotkb": "XCT; F26H11.9", "gene_names_refseq": "F26H11.9; F26H11_9; XAP5 CIRCADIAN TIMEKEEPER; XCT", "protein_names_uniprotkb": "Protein XAP5 CIRCADIAN TIMEKEEPER", "protein_names_refseq": "XAP5 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G21150)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10617197;14593172;18463617;18515502;19245862;19376835;20466843;21768351;22223895;22440515;23111157;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27862469;30833711", "class_list": "", "function": "Involved in light regulation of the circadian clock and photomorphogenesis. May play a global role in coordinating growth in response to the light environment. Acts as a light quality sensor directing both negative and positive transcriptional regulation. Inhibits growth in red light but promote growth in blue light. Inhibits clock gene expression in diurnal cycles. Plays no role in the control of flowering time., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SKP8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0042752 regulation of circadian rhythm;GO:0048511 rhythmic process;GO:0006325 chromatin organization;GO:0035196 miRNA processing;GO:0009637 response to blue light", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q8H110-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H136-1", "uniprot_id": [ { "id": "RH14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H136", "type": "external" } ], "mass": 67728.0, "length": 619, "protein_name": "DEAD-box ATP-dependent RNA helicase 14", "gene_name": "RH14", "organism": "Arabidopsis", "refseq_name": "DEAD box RNA helicase 1", "refseq_ac": [ { "id": "NP_001030619", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030619", "type": "external" } ], "gene_names_uniprotkb": "RH14; DRH1; F4P13.9", "gene_names_refseq": "ARABIDOPSIS THALIANA DEAD BOX RNA HELICASE 1; ATDRH1; DEAD box RNA helicase 1; DRH1; F4P13.9; F4P13_9; RNA HELICASE DRH1", "protein_names_uniprotkb": "DEAD-box ATP-dependent RNA helicase 14; 3.6.4.13", "protein_names_refseq": "DEAD box RNA helicase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01540)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130713;14593172;17168887;19245862;19376835;20466843;21768351;22223895;23328941;23572148;23660473;23776212;24043427;24265739;25561503;26091701;27419465;27862469;30833711;9592148", "class_list": "", "function": "ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O64430;Q8W4F5;Q93WJ3", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0006364 rRNA processing", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q8H136-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H151-1", "uniprot_id": [ { "id": "AAE13_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H151", "type": "external" } ], "mass": 67164.0, "length": 608, "protein_name": "Malonate--CoA ligase", "gene_name": "AAE13", "organism": "Arabidopsis", "refseq_name": "AMP-dependent synthetase and ligase family protein", "refseq_ac": [ { "id": "NP_001319565", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319565", "type": "external" } ], "gene_names_uniprotkb": "AAE13; MSL1.21", "gene_names_refseq": "AAE13; acyl activating enzyme 13", "protein_names_uniprotkb": "Malonate--CoA ligase; 6.2.1.76; Acyl-activating enzyme 13; Malonyl-CoA synthetase", "protein_names_refseq": "AMP-dependent synthetase and ligase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16170)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10819329;12805634;14593172;21642549;27862469", "class_list": "", "function": "Malonate--CoA ligase that catalyzes the formation of malonyl-CoA directly from malonate and CoA. May be required for the detoxification of malonate., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFU5;Q9LW70", "ec_number_list": [ { "id": "6.2.1.76", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.76", "type": "external" } ], "go_molecular_function": "GO:0090409 malonyl-CoA synthetase activity;GO:0031956 medium-chain fatty acid-CoA ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0006633 fatty acid biosynthetic process;GO:0090410 malonate catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8H151-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H157-1", "uniprot_id": [ { "id": "PTR19_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H157", "type": "external" } ], "mass": 63982.0, "length": 585, "protein_name": "Protein NRT1/ PTR FAMILY 4.6", "gene_name": "NPF4.6", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "NPF4.6; AIT1; NRT1.2; NTL1; NTR1:2; T17F3.12", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein NRT1/ PTR FAMILY 4.6; AtNPF4.6; Nitrate transporter 1.2; Nitrate transporter NTL1; Protein ABA-IMPORTING TRANSPORTER 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69850)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10449574;11130712;12668777;14593172;16478044;17481610;20501909;22645333;24055139;24084651;27862469", "class_list": "", "function": "Low-affinity proton-dependent nitrate transporter. Involved in constitutive nitrate uptake. Not involved in histidine or dipeptides transport. Involved in (+)-abscisic acid (ABA) transport, but not in gibberellin, indole-3-acetic acid or jasmonic acid import. Mediates cellular ABA uptake. Nitrate does not compete with abscisic acid as a substrate of NPF4.6 (PubMed:24084651)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81393;Q8W4N9;Q9CAR8", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0015293 symporter activity;GO:0090440 abscisic acid transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0009624 response to nematode;GO:0042128 nitrate assimilation;GO:0010119 regulation of stomatal movement;GO:0080168 abscisic acid transport", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8H157-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H183-1", "uniprot_id": [ { "id": "BUP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H183", "type": "external" } ], "mass": 45553.0, "length": 408, "protein_name": "Beta-ureidopropionase", "gene_name": "PYD3", "organism": "Arabidopsis", "refseq_name": "beta-ureidopropionase", "refseq_ac": [ { "id": "NP_201242", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201242", "type": "external" } ], "gene_names_uniprotkb": "PYD3; BETA-UP; MSJ1.21", "gene_names_refseq": "BETA-UP; MSJ1.21; MSJ1_21; PYD3; PYRIMIDINE 3; beta-ureidopropionase", "protein_names_uniprotkb": "Beta-ureidopropionase; 3.5.1.6; N-carbamoyl-beta-alanine amidohydrolase; Protein PYRIMIDINE 3", "protein_names_refseq": "beta-ureidopropionase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64370)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11161056;14593172;19413687;27862469;28011693;9501997", "class_list": "", "function": "Catalyzes a late step in pyrimidine degradation. Converts N-carbamoyl-beta-aminoisobutyrate and N-carbamoyl-beta-alanine (3-ureidopropanoate) to, respectively, beta-aminoisobutyrate and beta-alanine, ammonia and carbon dioxide. Involved in the recycling of nitrogen from nucleobases to general nitrogen metabolism., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FMF2", "ec_number_list": [ { "id": "3.5.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.6", "type": "external" } ], "go_molecular_function": "GO:0003837 beta-ureidopropionase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006212 uracil catabolic process;GO:0033396 beta-alanine biosynthetic process via 3-ureidopropionate;GO:0043562 cellular response to nitrogen levels", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H183-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H191-1", "uniprot_id": [ { "id": "PAO4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H191", "type": "external" } ], "mass": 54931.0, "length": 497, "protein_name": "Probable polyamine oxidase 4", "gene_name": "PAO4", "organism": "Arabidopsis", "refseq_name": "polyamine oxidase 4", "refseq_ac": [ { "id": "NP_176759", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176759", "type": "external" } ], "gene_names_uniprotkb": "PAO4; F1E22.18", "gene_names_refseq": "ATPAO4; F1E22.18; F1E22_18; PAO4; polyamine oxidase 4", "protein_names_uniprotkb": "Probable polyamine oxidase 4; 1.5.3.16; Amine oxidase 2; AtPAO4", "protein_names_refseq": "polyamine oxidase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65840)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;16778015;18583528;18703589;20532512;21081665;26925084;27862469", "class_list": "", "function": "Flavoenzyme involved in polyamine back-conversion (PubMed:18703589, PubMed:20532512, PubMed:21081665, PubMed:26925084). Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine and spermidine (PubMed:18703589, PubMed:20532512, PubMed:21081665, PubMed:26925084). Substrate preference is spermine > spermidine (PubMed:18703589, PubMed:21081665). No activity detected when putrescine or N(1)-acetylspermine are used as substrates (PubMed:18703589). Plays an important role in the regulation of polyamine intracellular concentration (Probable)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94JZ7;Q9SHX4", "ec_number_list": [ { "id": "1.5.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.3.16", "type": "external" }, { "id": "1.5.3.17", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.3.17", "type": "external" }, { "id": "1.5.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.3.-", "type": "external" } ], "go_molecular_function": "GO:0046592 polyamine oxidase activity;GO:0052901 spermine oxidase activity", "go_cellular_component": "GO:0005777 peroxisome", "go_biological_process": "GO:0046203 spermidine catabolic process;GO:0006598 polyamine catabolic process;GO:0046208 spermine catabolic process;GO:1903602 thermospermine catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8H191-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1B3-1", "uniprot_id": [ { "id": "BIP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1B3", "type": "external" } ], "mass": 75149.0, "length": 675, "protein_name": "Heat shock 70 kDa protein BIP3", "gene_name": "BIP3", "organism": "Arabidopsis", "refseq_name": "Heat shock protein 70 (Hsp 70) family protein", "refseq_ac": [ { "id": "NP_001184944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001184944", "type": "external" } ], "gene_names_uniprotkb": "BIP3; BIP-L; F7G19.5; HSP70-13; MED37B; MED37_1", "gene_names_refseq": "BIP3; F7G19.5; F7G19_5; binding protein 3", "protein_names_uniprotkb": "Heat shock 70 kDa protein BIP3; AtBP3; AtHsp70-13; BiP chaperone BIP-L; BiP3; Heat shock 70 kDa protein 13; Heat shock protein 70-13; Hsp70 protein BiP chaperone BIP-L; Luminal-binding protein 3", "protein_names_refseq": "Heat shock protein 70 (Hsp 70) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09080)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;11402207;11599561;12853141;21482766;22021418;23624714;24486762;26186593;26251880;27862469", "class_list": "", "function": "In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable). Required for pollen development and pollen tube growth (PubMed:24486762). May be required for the early stages of female gametophyte development, but not for polar nuclei fusion during female gametophyte (PubMed:26251880). Possesses ATPase activity in vitro (PubMed:26186593)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HZD5;O04022", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0031072 heat shock protein binding;GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0034663 endoplasmic reticulum chaperone complex;GO:0099503 secretory vesicle;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005788 endoplasmic reticulum lumen", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006457 protein folding;GO:0030968 endoplasmic reticulum unfolded protein response;GO:0036503 ERAD pathway;GO:0009408 response to heat", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8H1B3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1D3-1", "uniprot_id": [ { "id": "NPY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1D3", "type": "external" } ], "mass": 64402.0, "length": 571, "protein_name": "Phototropic-responsive NPH3 family protein NPY1", "gene_name": "NPY1", "organism": "Arabidopsis", "refseq_name": "Phototropic-responsive NPH3 family protein", "refseq_ac": [ { "id": "NP_001327983", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327983", "type": "external" } ], "gene_names_uniprotkb": "NPY1; ENP; F11C18.20; MAB4", "gene_names_refseq": "ENHANCER OF PINOID; ENP; F11C18.20; F11C18_20; MAB4; MACCHI-BOU 4; NAKED PINS IN YUC MUTANTS 1; NPY1", "protein_names_uniprotkb": "Phototropic-responsive NPH3 family protein NPY1; Protein ENHANCER OF PINOID; Protein MACCHI-BOU 4; Protein NAKED PINS IN YUC MUTANTS 1", "protein_names_refseq": "Phototropic-responsive NPH3 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31820)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617198;14593172;15749712;16107478;17913786;18000043;19075219;20374526;20833732;21490067;24395791;25561503;27862469;29654922;33705718", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Coregulates with PID the auxin-mediated plant organogenesis (PubMed:18000043, PubMed:21490067). Regulates basipetal PIN proteins (e.g. PIN1) polarization to establish inward auxin transport from the L1 surface of incipient organ primordia; this process is essential for the progression of flower organs development (PubMed:16107478, PubMed:21490067, PubMed:24395791). Recruited to the plasma membrane by PINs (e.g. PIN1 and PIN2) and, in concert with AGC kinases-mediated (e.g. D6PK and PID) PINs phosphorylation, maintains their cell polarity (apical or basal) through limiting lateral diffusion-based escape (PubMed:33705718). Induces auxin response in inner cell layers through a shift in PIN1 localization (PubMed:24395791). Influences cotyledon development by regulating auxin distribution mainly in the protodermal cell layer (PubMed:16107478, PubMed:21490067). May play an essential role in root gravitropic responses (PubMed:17913786, PubMed:19075219, PubMed:20833732, PubMed:21490067)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8B383;Q8RWY9;Q9SZ49", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016324 apical plasma membrane", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0045176 apical protein localization;GO:0009908 flower development;GO:0009911 positive regulation of flower development;GO:0009958 positive gravitropism", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8H1D3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1D4-1", "uniprot_id": [ { "id": "DRB4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1D4", "type": "external" } ], "mass": 38416.0, "length": 355, "protein_name": "Double-stranded RNA-binding protein 4", "gene_name": "DBR4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "DBR4; F26K9.230", "gene_names_refseq": "", "protein_names_uniprotkb": "Double-stranded RNA-binding protein 4; AtDRB4; dsRNA-binding protein 4", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G62800)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130713;14593172;15821876;16682354;17221360;18463617;18615098;18625233;18799732;19376835;20466843;23111157;23328941;23572148;23776212;25561503;27862469;28011693;30833711", "class_list": "", "function": "Double-stranded RNA-binding protein involved in RNA-mediated post-transcriptional gene silencing (PTGS). Functions in the trans-acting small interfering RNAs (ta-siRNAs) biogenesis by binding and assisting DICER-LIKE 4 (DCL4). Required for DCL4 activity. Required for the 21 nucleotide ta-siRNAs production of the TAS3 transcript in leaves but not in flowers. Plays an important role in silencing RNA of both DNA and RNA viruses. Involved with argonaute 7 (AGO7) and RDR6 in turnip crinkle virus (TCV) silencing. May not be directly involved in viral siRNA production. May stabilize the 21 nucleotide viral siRNAs and deliver them to the RISC complex. Targeted by the viral silencing suppressor (VSR) transactivator/viroplasmin (TAV) protein of the cauliflower mosaic virus (CaMV) that inactivates DRB4 function in RNA silencing. Probably not involved in the guide strand selection from RNA duplexes. Involved in leaf morphology through its function in ta-siRNA-mediated silencing., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B5BUY7;Q8VXY2;Q9LZI5", "ec_number_list": [], "go_molecular_function": "GO:0003725 double-stranded RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0051607 defense response to virus;GO:0035196 miRNA processing;GO:0009616 RNAi-mediated antiviral immune response;GO:0010267 ta-siRNA processing", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8H1D4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1D9-1", "uniprot_id": [ { "id": "TYDP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1D9", "type": "external" } ], "mass": 68139.0, "length": 605, "protein_name": "Tyrosyl-DNA phosphodiesterase 1", "gene_name": "TDP1", "organism": "Arabidopsis", "refseq_name": "tyrosyl-DNA phosphodiesterase-like protein", "refseq_ac": [ { "id": "NP_197021", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197021", "type": "external" } ], "gene_names_uniprotkb": "TDP1; F8M21.60", "gene_names_refseq": "F8M21.60; F8M21_60; TDP1; tyrosyl-DNA phosphodiesterase 1", "protein_names_uniprotkb": "Tyrosyl-DNA phosphodiesterase 1; 3.1.4.-; AtTDP; Tyr-DNA phosphodiesterase 1", "protein_names_refseq": "tyrosyl-DNA phosphodiesterase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15170)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;20876339;22214184;27862469", "class_list": "", "function": "DNA repair enzyme that can remove a variety of covalent adducts from DNA through hydrolysis of a 3'-phosphodiester bond, giving rise to DNA with a free 3' phosphate. Catalyzes the hydrolysis of dead-end complexes between DNA and the topoisomerase I active site tyrosine residue., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZM6;Q9LXG4", "ec_number_list": [], "go_molecular_function": "GO:0003690 double-stranded DNA binding;GO:0004527 exonuclease activity;GO:0003697 single-stranded DNA binding;GO:0017005 3'-tyrosyl-DNA phosphodiesterase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006281 DNA repair", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8H1D9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1E7-1", "uniprot_id": [ { "id": "NOF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1E7", "type": "external" } ], "mass": 86920.0, "length": 754, "protein_name": "Protein NUCLEOLAR FACTOR 1", "gene_name": "NOF1", "organism": "Arabidopsis", "refseq_name": "U3 small nucleolar RNA-associated protein", "refseq_ac": [ { "id": "NP_564032", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564032", "type": "external" } ], "gene_names_uniprotkb": "NOF1; F11A6.3", "gene_names_refseq": "F11A6.3; F11A6_3; NOF1; nucleolar factor 1", "protein_names_uniprotkb": "Protein NUCLEOLAR FACTOR 1", "protein_names_refseq": "U3 small nucleolar RNA-associated protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17690)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;18463617;20466843;20877469;27792779;27862469;30833711", "class_list": "", "function": "DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (By similarity). Involved in the control of rRNA expression (PubMed:20877469). Required for embryo development and female gametogenesis (PubMed:20877469)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93ZS0;Q9FZ64", "ec_number_list": [], "go_molecular_function": "GO:0019843 rRNA binding;GO:0034511 U3 snoRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0032040 small-subunit processome", "go_biological_process": "GO:0009303 rRNA transcription;GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0009553 embryo sac development;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8H1E7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1F0-1", "uniprot_id": [ { "id": "BZP29_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1F0", "type": "external" } ], "mass": 60414.0, "length": 547, "protein_name": "bZIP transcription factor 29", "gene_name": "BZIP29", "organism": "Arabidopsis", "refseq_name": "Basic-leucine zipper (bZIP) transcription factor family protein", "refseq_ac": [ { "id": "NP_001031810", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031810", "type": "external" } ], "gene_names_uniprotkb": "BZIP29; DKML; F19H22.5", "gene_names_refseq": "F19H22.5; bZIP29; basic leucine-zipper 29", "protein_names_uniprotkb": "bZIP transcription factor 29; AtbZIP29; Protein DRINK ME-LIKE", "protein_names_refseq": "Basic-leucine zipper (bZIP) transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38900)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "10617198;11906833;14593172;18463617;20466843;22440515;23111157;23328941;23572148;23660473;23776212;25093810;25561503;26923089;27402171;27660483;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Transcription factor that acts as a repressor of reproductive development, meristem size and plant growth (PubMed:27402171). Regulates meristem size, cell size and cell number during plant development (PubMed:27660483). Binds to the promoters of the cell cycle regulators CYCB1-2 and SMR4, and genes involved in cell wall organization, such as XTH9, EXPA1 and EXPA3 (PubMed:27660483). Possesses transactivation activity in yeast (PubMed:25093810). Possesses transactivation activity in plant protoplasts (PubMed:27660483). Plays a role in abiotic stress response by binding to the 5'-CAGCTG-3' DNA sequence found in the promoters of MYB44 and TRX8 (PubMed:27660483). Plays a role in osmosensory response by binding to the 5'-AGCTGT/G-3' DNA sequence found in the promoters of the hypoosmolarity-responsive genes CYP707A1 and CYP707A3 (PubMed:25093810, PubMed:27660483). Binds to the 5'-AGCTGT-3' DNA sequence found in the promoter of the ZAT1 gene in response to abiotic stresses, such as oxidative stress, high-light, osmotic shock, salt and heat stresses (PubMed:26923089)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RXK4;Q9T0J7", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0090567 reproductive shoot system development", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q8H1F0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1H9-1", "uniprot_id": [ { "id": "CAOG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1H9", "type": "external" } ], "mass": 80138.0, "length": 712, "protein_name": "Amine oxidase [copper-containing] gamma 1", "gene_name": "CuAOgamma1", "organism": "Arabidopsis", "refseq_name": "Copper amine oxidase family protein", "refseq_ac": [ { "id": "NP_176469", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176469", "type": "external" } ], "gene_names_uniprotkb": "CuAOgamma1; CuAO1; F23N19.18", "gene_names_refseq": "COPPER AMINE OXIDASE1; CuAO1; F23N19.18; F23N19_18", "protein_names_uniprotkb": "Amine oxidase [copper-containing] gamma 1; 1.4.3.21; AtCuAO1; AtCuAOgamma1; Copper amine oxidase 1; Primary amine oxidase 1", "protein_names_refseq": "Copper amine oxidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62810)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;21471330;23915037;27862469;31862580", "class_list": "", "function": "Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:23915037). Required for abscisic acid- (ABA) and polyamine- (PA) and H(2)O(2)-dependent induced nitric oxide (NO) biosynthesis (PubMed:21471330). Involved in ABA signal transduction and in responses to osmotic stress (PubMed:21471330)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 4, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q84W14;Q9SI68", "ec_number_list": [ { "id": "1.4.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:1.4.3.21", "type": "external" } ], "go_molecular_function": "GO:0005507 copper ion binding;GO:0008131 primary methylamine oxidase activity;GO:0048038 quinone binding;GO:0052595 aliphatic amine oxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space;GO:0048046 apoplast", "go_biological_process": "GO:0009611 response to wounding;GO:0009414 response to water deprivation;GO:0009308 amine metabolic process;GO:0006809 nitric oxide biosynthetic process;GO:0009447 putrescine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H1H9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1Q2-1", "uniprot_id": [ { "id": "NBP35_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1Q2", "type": "external" } ], "mass": 37306.0, "length": 350, "protein_name": "Cytosolic Fe-S cluster assembly factor NBP35", "gene_name": "NBP35", "organism": "Arabidopsis", "refseq_name": "nucleotide binding protein 35", "refseq_ac": [ { "id": "NP_568748", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568748", "type": "external" } ], "gene_names_uniprotkb": "NBP35; K3K7.12", "gene_names_refseq": "ATNBP35; K3K7.12; K3K7_12; NBP35; NUCLEOTIDE BINDING PROTEIN 35; nucleotide binding protein 35", "protein_names_uniprotkb": "Cytosolic Fe-S cluster assembly factor NBP35; AtNBP35; Nucleotide binding protein 35", "protein_names_refseq": "nucleotide binding protein 35", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50960)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10470850;14593172;18957412;19084504;25561503;27862469", "class_list": "", "function": "Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as a Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development., [UniProtKB, HAMAP, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C5E1;Q9FI52", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042803 protein homodimerization activity;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0051536 iron-sulfur cluster binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H1Q2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1S7-1", "uniprot_id": [ { "id": "JMJ28_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1S7", "type": "external" } ], "mass": 105143.0, "length": 927, "protein_name": "Lysine-specific demethylase JMJ28", "gene_name": "JMJ28", "organism": "Arabidopsis", "refseq_name": "protein B160", "refseq_ac": [ { "id": "NP_193874", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193874", "type": "external" } ], "gene_names_uniprotkb": "JMJ28; B160; F18E5.50; T6K22.160", "gene_names_refseq": "B160; F18E5.50", "protein_names_uniprotkb": "Lysine-specific demethylase JMJ28; 1.14.11.-; AtJMJ28; Jumonji domain-containing protein 28; Lysine-specific histone demethylase JMJ28; Protein B160; Protein JUMONJI 28; [histone H3]-trimethyl-L-lysine monodemethylase JMJ28", "protein_names_refseq": "protein B160", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21430)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;17656687;18713399;27862469;28400174;33604650", "class_list": "", "function": "May function as histone H3 lysine demethylase and be involved in regulation of gene expression (By similarity). Regulates flowering time by promoting CONSTANS (CO) and CONSTANS-LIKE genes (e.g. COL2 and COL5) expression via interaction with FBH transcription factors (FBH1, FBH2, FBH3 and FBH4) at their loci to remove H3K9me2 repressive histone marks (PubMed:33604650). Also modulates the expression of several developmental genes such as MYB30, TFS1, AGL6 and RVE2 (PubMed:33604650)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A7Y5W7;O65408", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016491 oxidoreductase activity;GO:0031490 chromatin DNA binding;GO:0043565 sequence-specific DNA binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin;GO:0048188 Set1C/COMPASS complex;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0045815 transcription initiation-coupled chromatin remodeling;GO:0040029 epigenetic regulation of gene expression;GO:2000028 regulation of photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8H1S7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1Z0-1", "uniprot_id": [ { "id": "CER3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1Z0", "type": "external" } ], "mass": 72289.0, "length": 632, "protein_name": "Very-long-chain aldehyde decarbonylase CER3", "gene_name": "CER3", "organism": "Arabidopsis", "refseq_name": "Fatty acid hydroxylase superfamily", "refseq_ac": [ { "id": "NP_200588", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200588", "type": "external" } ], "gene_names_uniprotkb": "CER3; FLP1; MTI20.3; WAX2; YRE", "gene_names_refseq": "CER3; ECERIFERUM 3; FACELESS POLLEN 1; FLP1; MTI20.3; MTI20_3; WAX2; YRE", "protein_names_uniprotkb": "Very-long-chain aldehyde decarbonylase CER3; 4.1.99.5; Protein ECERIFERUM 3; Protein FACELESS POLLEN 1; Protein WAX2; Protein YORE-YORE", "protein_names_refseq": "Fatty acid hydroxylase superfamily", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57800)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "12724542;12974811;14593172;14756310;17624331;19892830;21386033;22773744;27862469;9734815", "class_list": "", "function": "Involved in cuticule membrane and wax production, and in the typhine and sporopollenin biosynthesis of pollen. Core components of a very-long-chain alkane synthesis complex. May be the fatty acid reductase responsible for aldehyde formation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94B63;Q9FJN4", "ec_number_list": [ { "id": "4.1.99.5", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.99.5", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0016491 oxidoreductase activity;GO:0071771 aldehyde oxygenase (deformylating) activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0009611 response to wounding;GO:0010025 wax biosynthetic process;GO:0010143 cutin biosynthetic process;GO:0048235 pollen sperm cell differentiation;GO:0043447 alkane biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8H1Z0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L3P4-1", "uniprot_id": [ { "id": "THAL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L3P4", "type": "external" } ], "mass": 73973.0, "length": 654, "protein_name": "Protein THALLO", "gene_name": "THAL", "organism": "Arabidopsis", "refseq_name": "Sas10/U3 ribonucleoprotein (Utp) family protein", "refseq_ac": [ { "id": "NP_850397", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850397", "type": "external" } ], "gene_names_uniprotkb": "THAL; EMB2777; F18O19.24", "gene_names_refseq": "EMB2777; EMBRYO DEFECTIVE 2777; F18O19.24", "protein_names_uniprotkb": "Protein THALLO; Protein EMBRYO DEFECTIVE 2777", "protein_names_refseq": "Sas10/U3 ribonucleoprotein (Utp) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43650)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617197;14593172;15266054;18463617;19376835;20466843;23111157;23572148;23660473;23776212;25561503;26091701;26187819;27792779;27862469;28011693;29654922;30833711", "class_list": "", "function": "Essential protein during embryogenesis (PubMed:15266054, PubMed:27792779). Involved both in gene transcription regulation and in processing events critical for proper rRNA biogenesis and nucleolar organization during reproduction; contributes to pre-rRNA processing at the 5' external transcribed spacer (PubMed:27792779). Binds RNA (By similarity)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22838;Q0WVP9", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0032040 small-subunit processome", "go_biological_process": "GO:0006325 chromatin organization;GO:0006364 rRNA processing;GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8L3P4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L3X8-1", "uniprot_id": [ { "id": "SRC30_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L3X8", "type": "external" } ], "mass": 29567.0, "length": 262, "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL30", "gene_name": "SCL30", "organism": "Arabidopsis", "refseq_name": "SC35-like splicing factor 30", "refseq_ac": [ { "id": "NP_567021", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567021", "type": "external" } ], "gene_names_uniprotkb": "SCL30; T22E16.120", "gene_names_refseq": "At-SCL30; SC35-like splicing factor 30; SCL30", "protein_names_uniprotkb": "Serine/arginine-rich SC35-like splicing factor SCL30; At-SCL30; AtSCL30; SC35-like splicing factor 30; Serine/arginine-rich splicing factor 30", "protein_names_refseq": "SC35-like splicing factor 30", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55460)", "pathway_count": 1, "publication_count": 34, "publication_id_list": "11130713;12176998;14593172;15133128;15166240;16497658;16520337;16807317;17319848;18463617;19245862;19253305;19376835;20466843;20884799;21768351;21935421;22438062;23111157;23328941;23572148;23660473;23776212;24043427;24601666;25561503;26091701;26187819;27532006;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Involved in intron recognition and spliceosome assembly (Probable). Probably active at the 5' splice sites., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 24, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FYA9;Q9M2T3", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0016607 nuclear speck;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 3.5, "record_id": "Q8L3X8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L3X9-1", "uniprot_id": [ { "id": "KASM_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L3X9", "type": "external" } ], "mass": 49379.0, "length": 461, "protein_name": "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial", "gene_name": "KAS", "organism": "Arabidopsis", "refseq_name": "Beta-ketoacyl synthase", "refseq_ac": [ { "id": "NP_178533", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178533", "type": "external" } ], "gene_names_uniprotkb": "KAS; T1O3.5", "gene_names_refseq": "T1O3.5; T1O3_5", "protein_names_uniprotkb": "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial; 2.3.1.41; Beta-ketoacyl-ACP synthase; mtKAS", "protein_names_refseq": "Beta-ketoacyl synthase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G04540)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;14660674;15527780;17616510;23660473;27862469;28202596", "class_list": "", "function": "Catalyzes all the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (PubMed:17616510, PubMed:28202596). Able to elongate saturated acyl chains from 4 to at least 16 carbons (PubMed:17616510, PubMed:28202596). Uses malonyl-CoA but not acetyl-CoA as primer substrate (PubMed:17616510). When expressed in a heterologous system, reveals a bimodal distribution of products, with peaks at C8 and C14-C16 (PubMed:17616510). The major product of the reaction (octanoyl-ACP) is required for the lipoylation of essential mitochondrial proteins (PubMed:17616510, PubMed:28202596). Required for mitochondrial fatty acid synthesis (mtFAS) (PubMed:28202596). MtFAS are essential for photorespiration and plant development, probably by influencing mitochondrial membrane lipid composition and other lipid metabolic pathways (PubMed:28202596)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJB7", "ec_number_list": [ { "id": "2.3.1.41", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.41", "type": "external" } ], "go_molecular_function": "GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0010027 thylakoid membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L3X9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L3Z8-1", "uniprot_id": [ { "id": "FZR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L3Z8", "type": "external" } ], "mass": 52840.0, "length": 483, "protein_name": "Protein FIZZY-RELATED 2", "gene_name": "FZR2", "organism": "Arabidopsis", "refseq_name": "FIZZY-related 2", "refseq_ac": [ { "id": "NP_194022", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194022", "type": "external" } ], "gene_names_uniprotkb": "FZR2; CCS52A1; CDH1-2; F7H19.90", "gene_names_refseq": "CCS52A1; F7H19.90; F7H19_90; FIZZY-related 2; FZR2; cell cycle switch protein 52 A1", "protein_names_uniprotkb": "Protein FIZZY-RELATED 2; Cell cycle switch protein CCS52A1", "protein_names_refseq": "FIZZY-related 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22910)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;12597875;14593172;15970679;19074624;19553203;20466843;21087491;21687678;22167058;22167059;22844260;27862469", "class_list": "", "function": "Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Necessary and sufficient for endoreduplication and correct cell expansion. Controls meristem size by stimulating endoreduplication in the elongation zone., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82740", "ec_number_list": [], "go_molecular_function": "GO:0010997 anaphase-promoting complex binding;GO:1990757 ubiquitin ligase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0009825 multidimensional cell growth;GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process;GO:0042023 DNA endoreduplication", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8L3Z8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L4H0-1", "uniprot_id": [ { "id": "WEE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L4H0", "type": "external" } ], "mass": 56530.0, "length": 500, "protein_name": "Wee1-like protein kinase", "gene_name": "WEE1", "organism": "Arabidopsis", "refseq_name": "WEE1-like kinase", "refseq_ac": [ { "id": "NP_171796", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171796", "type": "external" } ], "gene_names_uniprotkb": "WEE1; F22D16.3", "gene_names_refseq": "ATWEE1; F22D16.3; F22D16_3; WEE1 kinase homolog; WEE1-KINASE; WEE1", "protein_names_uniprotkb": "Wee1-like protein kinase; 2.7.10.2; Wee1-At", "protein_names_refseq": "WEE1-like kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02970)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12111237;16856985;17209125;27862469", "class_list": "", "function": "Cell cycle regulatory kinase that is not rate-limiting for cycle progression under normal growth conditions. Transcriptionally activated upon DNA stress or damage in an ATR- or ATM-dependent manner. Once activated, inhibits plant growth by arresting dividing cells in the G2 phase before proceeding into mitosis. Down-regulates CDKA-1 and CDKD-2 by tyrosine phosphorylation. May target principally CDKA-1., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SRY9", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0004715 non-membrane spanning protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000076 DNA replication checkpoint signaling;GO:0051301 cell division;GO:1902750 negative regulation of cell cycle G2/M phase transition", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L4H0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L4M1-1", "uniprot_id": [ { "id": "THOC6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L4M1", "type": "external" } ], "mass": 40073.0, "length": 367, "protein_name": "THO complex subunit 6", "gene_name": "THO6", "organism": "Arabidopsis", "refseq_name": "DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1", "refseq_ac": [ { "id": "NP_849989", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849989", "type": "external" } ], "gene_names_uniprotkb": "THO6; DWA1; F27F23.25; THOC6", "gene_names_refseq": "AtTHO6; DWA1; DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1; F27F23.25; THO6", "protein_names_uniprotkb": "THO complex subunit 6; AtTHO6; Protein DWD HYPERSENSITIVE TO ABA 1; WD repeat-containing protein DWA1", "protein_names_refseq": "DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G19430)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;20525848;20634427;27862469", "class_list": "", "function": "Acts as a component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export., [UniProtKB]; Component of the CUL4-RBX1-DDB1-DWA1/DWA2 E3 ubiquitin-protein ligase complex that acts as a negative regulator in abscisic acid (ABA) signaling. May function as the substrate recognition module within this complex leading to ABI5 degradation. Functionally redundant with DWA2., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64576", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0000347 THO complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0000346 transcription export complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0006406 mRNA export from nucleus;GO:0008380 RNA splicing;GO:0016567 protein ubiquitination;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L4M1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L4R0-1", "uniprot_id": [ { "id": "TGD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L4R0", "type": "external" } ], "mass": 37907.0, "length": 350, "protein_name": "Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic", "gene_name": "TGD1", "organism": "Arabidopsis", "refseq_name": "trigalactosyldiacylglycerol 1", "refseq_ac": [ { "id": "NP_001322720", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322720", "type": "external" } ], "gene_names_uniprotkb": "TGD1; ABCI14; F14P1.27", "gene_names_refseq": "ABCI14; ATP-binding cassette I14; F14P1.27; F14P1_27; TGD1; trigalactosyldiacylglycerol 1", "protein_names_uniprotkb": "Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic; ABC transporter ABCI.14; ABC transporter I family member 14; AtABCI14", "protein_names_refseq": "trigalactosyldiacylglycerol 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G19800)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;12743031;14593172;16199613;18299247;18689504;19423640;20410050;22544736;26410300;27862469", "class_list": "", "function": "Required during embryogenesis. Permease involved in lipid transfer from the endoplasmic reticulum (ER) to plastids, and necessary for thylakoids formation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FXH8", "ec_number_list": [], "go_molecular_function": "GO:0005319 lipid transporter activity;GO:0005548 phospholipid transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0043190 ATP-binding cassette (ABC) transporter complex;GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0006869 lipid transport;GO:0015914 phospholipid transport", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8L4R0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L539-1", "uniprot_id": [ { "id": "5FCL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L539", "type": "external" } ], "mass": 31233.0, "length": 277, "protein_name": "5-formyltetrahydrofolate cyclo-ligase, mitochondrial", "gene_name": "5FCL", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "5FCL; T19L5.10", "gene_names_refseq": "", "protein_names_uniprotkb": "5-formyltetrahydrofolate cyclo-ligase, mitochondrial; 5-FCL; 6.3.3.2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13050)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;12207015;14593172;14993207;15888445;25561503;27862469", "class_list": "", "function": "Contributes to tetrahydrofolate metabolism and photorespiration through the regulation of serine hydroxymethyltransferase. Prefers the pentalutamyl to the monoglutamyl form of 5-formyltetrahydrofolate., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K2F3;Q84WD9;Q9FYA5", "ec_number_list": [ { "id": "6.3.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.3.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0030272 5-formyltetrahydrofolate cyclo-ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0006952 defense response;GO:0035999 tetrahydrofolate interconversion;GO:0046653 tetrahydrofolate metabolic process;GO:0009396 folic acid-containing compound biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L539-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5A7-1", "uniprot_id": [ { "id": "SOT15_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5A7", "type": "external" } ], "mass": 41364.0, "length": 359, "protein_name": "Cytosolic sulfotransferase 15", "gene_name": "SOT15", "organism": "Arabidopsis", "refseq_name": "sulfotransferase 2A", "refseq_ac": [ { "id": "NP_568177", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568177", "type": "external" } ], "gene_names_uniprotkb": "SOT15; MOJ9.18; ST2A", "gene_names_refseq": "ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A; ATST2A; MOJ9.18; MOJ9_18; ST2A; sulfotransferase 2A", "protein_names_uniprotkb": "Cytosolic sulfotransferase 15; 2.8.2.39; AtSOT15; AtST2a; Sulfotransferase 2a", "protein_names_refseq": "sulfotransferase 2A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G07010)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "12637544;14593172;15234990;27862469;9679202", "class_list": "", "function": "Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to specifically catalyze the sulfate conjugation of hydroxyjasmonates, with a preference for 12-hydroxyjasmonate over 11-hydroxyjasmonate. No activity with 12-hydroxyjasmonic acid methyl ester, cucurbic acid, 7-iso-cucurbic acid, 6-epi-cucurbic acid, 6-epi-7-iso-cucurbic acid and their methyl esters, prostaglandin E2, arachidonyl alcohol and 11-eicosenol., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q940P4;Q9FL45", "ec_number_list": [ { "id": "2.8.2.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.2.39", "type": "external" } ], "go_molecular_function": "GO:0008146 sulfotransferase activity;GO:0080131 hydroxyjasmonate sulfotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0051923 sulfation;GO:0009694 jasmonic acid metabolic process;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L5A7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5Y0-1", "uniprot_id": [ { "id": "VPS39_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5Y0", "type": "external" } ], "mass": 110639.0, "length": 1000, "protein_name": "Vacuolar sorting protein 39", "gene_name": "VPS39", "organism": "Arabidopsis", "refseq_name": "Vacuolar sorting protein 39", "refseq_ac": [ { "id": "NP_001328378", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328378", "type": "external" } ], "gene_names_uniprotkb": "VPS39; AP22.59; C7A10.730; EMB2754", "gene_names_refseq": "AP22.59; AP22_59; EMB2754; EMBRYO DEFECTIVE 2754", "protein_names_uniprotkb": "Vacuolar sorting protein 39; Protein EMBRYO DEFECTIVE 2754", "protein_names_refseq": "Vacuolar sorting protein 39", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36630)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10617198;12589039;14593172;15266054;18463617;19423640;20466843;23111157;23328941;23572148;23660473;23776212;25561503;27862469;29463724;9461215", "class_list": "", "function": "Essential protein required during embryogenesis (PubMed:15266054, PubMed:29463724). Believed to act in part as a component of the putative HOPS endosomal tethering complex. HOPS is required for the central vacuole formation (PubMed:29463724). May play a role in clustering and fusion of late endosomes and lysosomes. Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Required for fusion of endosomes and autophagosomes with lysosomes (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8B4G5;C0Z240;O23218;Q304A1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0030897 HOPS complex;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0015031 protein transport;GO:0006914 autophagy;GO:0016192 vesicle-mediated transport;GO:0007033 vacuole organization", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8L5Y0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L633-1", "uniprot_id": [ { "id": "RNZ2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L633", "type": "external" } ], "mass": 39951.0, "length": 354, "protein_name": "tRNase Z TRZ2, chloroplastic", "gene_name": "TRZ2", "organism": "Arabidopsis", "refseq_name": "Metallo-hydrolase/oxidoreductase superfamily protein", "refseq_ac": [ { "id": "NP_178532", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178532", "type": "external" } ], "gene_names_uniprotkb": "TRZ2; CPZ; T1O3.6", "gene_names_refseq": "CPZ; T1O3.6; T1O3_6; TRNASE Z 2; TRZ2", "protein_names_uniprotkb": "tRNase Z TRZ2, chloroplastic; 3.1.26.11; AthTRZS2; Chloroplast RNase Z; Chloroplast ribonuclease Z; Short tRNase Z 2; Zinc phosphodiesterase CPZ; tRNA 3 endonuclease; tRNase ZS2", "protein_names_refseq": "Metallo-hydrolase/oxidoreductase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G04530)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;12032089;14593172;16336119;19411372;27862469", "class_list": "", "function": "Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity. Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LGU8;Q9SJB8", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0042781 3'-tRNA processing endoribonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0008033 tRNA processing;GO:0042780 tRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L633-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L636-1", "uniprot_id": [ { "id": "NCL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L636", "type": "external" } ], "mass": 63417.0, "length": 585, "protein_name": "Sodium/calcium exchanger NCL", "gene_name": "NCL", "organism": "Arabidopsis", "refseq_name": "sodium/calcium exchanger family protein / calcium-binding EF hand family protein", "refseq_ac": [ { "id": "NP_564623", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564623", "type": "external" } ], "gene_names_uniprotkb": "NCL; F12M16.12", "gene_names_refseq": "AtNCL; F12M16.12; F12M16_12; NCL; Na+/Ca2+ exchanger", "protein_names_uniprotkb": "Sodium/calcium exchanger NCL; AtNCL; Na(+)/Ca(2+)-exchange protein NCL; Protein NCX-like", "protein_names_refseq": "sodium/calcium exchanger family protein / calcium-binding EF hand family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G53210)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;23148213;25561503;26296956;27419465;27862469;30833711", "class_list": "", "function": "Possesses sodium/calcium exchanger (NCX) activity when expressed in a heterologous mammalian CHO-K1 cell system (PubMed:23148213). Does not possess cation/proton exchanger (CAX) or sodium/proton (NHX) activity when expressed in a heterologous yeast cell system. Has the ability to bind calcium in vitro. Participates in the maintenance of calcium homeostasis (PubMed:23148213, PubMed:26296956). May play a role in auxin response, diurnal rhythm and flowering time (PubMed:26296956). Involved in salt stress response (PubMed:23148213)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q67ZY8;Q9ASV9;Q9MAH9", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005509 calcium ion binding;GO:0005432 calcium:sodium antiporter activity;GO:0015369 calcium:proton antiporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005774 vacuolar membrane;GO:0005773 vacuole;GO:0009506 plasmodesma", "go_biological_process": "GO:0006874 intracellular calcium ion homeostasis;GO:0070588 calcium ion transmembrane transport;GO:0055074 calcium ion homeostasis;GO:0071472 cellular response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L636-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L638-1", "uniprot_id": [ { "id": "ALG10_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L638", "type": "external" } ], "mass": 58439.0, "length": 509, "protein_name": "Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase", "gene_name": "ALG10", "organism": "Arabidopsis", "refseq_name": "DIE2/ALG10 family", "refseq_ac": [ { "id": "NP_195861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195861", "type": "external" } ], "gene_names_uniprotkb": "ALG10; T1E22_170", "gene_names_refseq": "ALG10; T1E22.170; T1E22_170; homolog of yeast ALG10", "protein_names_uniprotkb": "Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase; 2.4.1.256; Alpha-1,2-glucosyltransferase ALG10 homolog; Protein HOMOLOG OF YEAST ALG10", "protein_names_refseq": "DIE2/ALG10 family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02410)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;21707802;24905498;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase that operates in the biosynthetic pathway of dolichol-linked oligosaccharides, the glycan precursors employed in protein asparagine (N)-glycosylation. The assembly of dolichol-linked oligosaccharides begins on the cytosolic side of the endoplasmic reticulum membrane and finishes in its lumen. The sequential addition of sugars to dolichol pyrophosphate produces dolichol-linked oligosaccharides containing fourteen sugars, including two GlcNAcs, nine mannoses and three glucoses. Once assembled, the oligosaccharide is transferred from the lipid to nascent proteins by oligosaccharyltransferases. In the lumen of the endoplasmic reticulum, adds the third and last glucose residue from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide intermediate Glc(2)Man(9)GlcNAc(2)-PP-Dol to produce Glc(3)Man(9)GlcNAc(2)-PP-Dol., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ85", "ec_number_list": [ { "id": "2.4.1.256", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.256", "type": "external" } ], "go_molecular_function": "GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity;GO:0046527 glucosyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006488 dolichol-linked oligosaccharide biosynthetic process;GO:0006487 protein N-linked glycosylation;GO:0009651 response to salt stress;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L638-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L649-1", "uniprot_id": [ { "id": "BB_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L649", "type": "external" } ], "mass": 27983.0, "length": 248, "protein_name": "E3 ubiquitin-protein ligase BIG BROTHER", "gene_name": "BB", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_001030922", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030922", "type": "external" } ], "gene_names_uniprotkb": "BB; EOD1; TEL3S.1", "gene_names_refseq": "BB2; BB; BIG BROTHER; ENHANCER1 OF DA1; EOD1", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase BIG BROTHER; 2.3.2.27; Protein ENHANCER OF DA1-1; RING-type E3 ubiquitin transferase BIG BROTHER", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63530)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;16461280;18483219;19423640;27862469;28003326;28167503;28922745", "class_list": "", "function": "E3 ubiquitin-protein ligase that limits organ size, and possibly seed size, in a dose-dependent manner. Negatively regulates the duration of cell proliferation in leaves and petals independently of the major phytohormones (e.g. auxin, cytokinin, gibberellin, brassinosteroids, ethylene, abscisic acid, jasmonic acid), probably by targeting growth stimulators for degradation (PubMed:16461280, PubMed:18483219). Limits the proliferation of root meristematic cells (PubMed:28922745). Polyubiquitinates DA1 (PubMed:28167503). Involved in the promotion of leaf senescence, in addition to its function in restricting plant growth (PubMed:28003326). Possesses E3 ubiquitin-protein ligase activity in vitro (PubMed:16461280, PubMed:18483219, PubMed:28167503)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z296", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0031624 ubiquitin conjugating enzyme binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0046621 negative regulation of organ growth;GO:0008285 negative regulation of cell population proliferation;GO:0016567 protein ubiquitination;GO:0051865 protein autoubiquitination;GO:0048437 floral organ development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L649-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L6Y1-1", "uniprot_id": [ { "id": "UBP14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L6Y1", "type": "external" } ], "mass": 88374.0, "length": 797, "protein_name": "Ubiquitin carboxyl-terminal hydrolase 14", "gene_name": "UBP14", "organism": "Arabidopsis", "refseq_name": "ubiquitin-specific protease 14", "refseq_ac": [ { "id": "NP_566666", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566666", "type": "external" } ], "gene_names_uniprotkb": "UBP14; F3H11_1; K10D20.17; K10D20.26; TTN6", "gene_names_refseq": "ATUBP14; PER1; TITAN6; TTN6; UBP14; phosphate deficiency root hair defective1; ubiquitin-specific protease 14", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase 14; 3.4.19.12; AtUBP14; Deubiquitinating enzyme 14; TITAN-6 protein; Ubiquitin thioesterase 14; Ubiquitin-specific-processing protease 14", "protein_names_refseq": "ubiquitin-specific protease 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20630)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10907853;11115897;11576424;11788751;14593172;17272265;23111157;27862469", "class_list": "", "function": "Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Involved in seed and embryo development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WV77;Q9FPT0;Q9LJT6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004843 cysteine-type deubiquitinase activity;GO:1990450 linear polyubiquitin binding;GO:0061815 Met1-linked polyubiquitin deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0042127 regulation of cell population proliferation;GO:0009734 auxin-activated signaling pathway;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L6Y1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L6Z4-1", "uniprot_id": [ { "id": "RPS9M_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L6Z4", "type": "external" } ], "mass": 47988.0, "length": 430, "protein_name": "Small ribosomal subunit protein uS9m", "gene_name": "RPS9M", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein S5 domain 2-like superfamily protein", "refseq_ac": [ { "id": "NP_190477", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190477", "type": "external" } ], "gene_names_uniprotkb": "RPS9M; T2J13.70", "gene_names_refseq": "AT3G49090", "protein_names_uniprotkb": "Small ribosomal subunit protein uS9m; 30S ribosomal protein S9, mitochondrial", "protein_names_refseq": "Ribosomal protein S5 domain 2-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G49080)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14593172;27862469;29312411;36423343", "class_list": "", "function": "Mitochondrial ribosomal protein required for central cell maturation. May work together with PIA2 in controlling female gametophyte development, possibly by regulating the expression of some mitochondrial proteins., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67Y07;Q9SMU6", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0022627 cytosolic small ribosomal subunit", "go_biological_process": "GO:0006412 translation;GO:0009555 pollen development;GO:0048229 gametophyte development;GO:0009559 embryo sac central cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L6Z4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L707-1", "uniprot_id": [ { "id": "IRX14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L707", "type": "external" } ], "mass": 59099.0, "length": 525, "protein_name": "Beta-1,4-xylosyltransferase IRX14", "gene_name": "IRX14", "organism": "Arabidopsis", "refseq_name": "Nucleotide-diphospho-sugar transferases superfamily protein", "refseq_ac": [ { "id": "NP_195407", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195407", "type": "external" } ], "gene_names_uniprotkb": "IRX14; AP22.51; C7A10.470", "gene_names_refseq": "AP22.51; AP22_51; IRX14; irregular xylem 14", "protein_names_uniprotkb": "Beta-1,4-xylosyltransferase IRX14; 2.4.2.24; Protein IRREGULAR XYLEM 14; Xylan xylosyltransferase IRX14", "protein_names_refseq": "Nucleotide-diphospho-sugar transferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36890)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;14593172;17944810;20335400;20424005;20595206;22080591;23111157;25118690;26482889;26834178;27862469;30228108;9461215", "class_list": "glycogene;glycosyltransferase", "function": "Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls (PubMed:17944810, PubMed:20335400, PubMed:20424005, PubMed:20595206). Involved in the elongation of glucuronoxylan xylosyl backbone (PubMed:17944810, PubMed:20335400, PubMed:20424005, PubMed:20595206). Xylan xylosyltransferase that acts cooperatively with IRX9 to achieve the successive addition of xylosyl residues during xylan backbone elongation (PubMed:22080591, PubMed:25118690). Required for the proper composition and structural properties of released seed coat mucilage (PubMed:26482889, PubMed:26834178). Required for the production of highly branched xylan polymers in seed coat mucilage (PubMed:26482889, PubMed:26834178). Xylan with xylose side chains seems to be necessary for pectin attachment to the seed surface (PubMed:26482889, PubMed:26834178). Together with MUCI70, required for xylan and pectin synthesis in seed coat epidermal (SCE) cells (PubMed:26482889, PubMed:26834178, PubMed:30228108)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 3, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "O23194", "ec_number_list": [ { "id": "2.4.2.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.24", "type": "external" } ], "go_molecular_function": "GO:0042285 xylosyltransferase activity;GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity;GO:0047517 1,4-beta-D-xylan synthase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0009834 plant-type secondary cell wall biogenesis;GO:0010051 xylem and phloem pattern formation;GO:0010154 fruit development;GO:0010417 glucuronoxylan biosynthetic process;GO:0045491 xylan metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8L707-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000011001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L743-1", "uniprot_id": [ { "id": "G6PD3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L743", "type": "external" } ], "mass": 67358.0, "length": 599, "protein_name": "Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic", "gene_name": "G6PD3", "organism": "Arabidopsis", "refseq_name": "glucose-6-phosphate dehydrogenase 3", "refseq_ac": [ { "id": "NP_173838", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173838", "type": "external" } ], "gene_names_uniprotkb": "G6PD3; F3I6.22", "gene_names_refseq": "F3I6.22; F3I6_22; G6PD3; glucose-6-phosphate dehydrogenase 3", "protein_names_uniprotkb": "Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic; 1.1.1.49; AtG6PD3; G6PDH3", "protein_names_refseq": "glucose-6-phosphate dehydrogenase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G24280)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;15634201;21309870;22074104;22223895;27862469", "class_list": "", "function": "Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (PubMed:15634201). The main function of this enzyme is to provide reducing power (NADPH) and pentose phosphates for fatty acid and nucleic acid synthesis which are involved in membrane synthesis and cell division (PubMed:15634201)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48695;Q53YG8", "ec_number_list": [ { "id": "1.1.1.49", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.49", "type": "external" } ], "go_molecular_function": "GO:0004345 glucose-6-phosphate dehydrogenase activity;GO:0050661 NADP binding", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009051 pentose-phosphate shunt, oxidative branch;GO:0006006 glucose metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L743-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L765-1", "uniprot_id": [ { "id": "BPM1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L765", "type": "external" } ], "mass": 44729.0, "length": 407, "protein_name": "BTB/POZ and MATH domain-containing protein 1", "gene_name": "BPM1", "organism": "Arabidopsis", "refseq_name": "BTB-POZ and MATH domain 1", "refseq_ac": [ { "id": "NP_001190334", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190334", "type": "external" } ], "gene_names_uniprotkb": "BPM1; T16G12.40", "gene_names_refseq": "ATBPM1; BPM1; BTB-POZ AND MATH DOMAIN 1; BTB-POZ and MATH domain 1; T16G12.40; T16G12_40", "protein_names_uniprotkb": "BTB/POZ and MATH domain-containing protein 1; AtBPM1; Protein BTB-POZ AND MATH DOMAIN 1", "protein_names_refseq": "BTB-POZ and MATH domain 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19000)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;14693377;15618422;15749712;15772280;19843165;27862469", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0016567 protein ubiquitination;GO:0042631 cellular response to water deprivation;GO:0071472 cellular response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L765-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L778-1", "uniprot_id": [ { "id": "CESA5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L778", "type": "external" } ], "mass": 120862.0, "length": 1069, "protein_name": "Cellulose synthase A catalytic subunit 5 [UDP-forming]", "gene_name": "CESA5", "organism": "Arabidopsis", "refseq_name": "cellulose synthase 5", "refseq_ac": [ { "id": "NP_196549", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196549", "type": "external" } ], "gene_names_uniprotkb": "CESA5; MYH9.8", "gene_names_refseq": "CESA5; MUCILAGE-MODIFIED 3; MUM3; MYH9.8; MYH9_8; cellulose synthase 5", "protein_names_uniprotkb": "Cellulose synthase A catalytic subunit 5 [UDP-forming]; 2.4.1.12; AtCesA5", "protein_names_refseq": "cellulose synthase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09870)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10048488;11178255;12481071;14506206;14593172;15308754;17427041;17878303;25561503;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FIB9", "ec_number_list": [ { "id": "2.4.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.12", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016760 cellulose synthase (UDP-forming) activity;GO:0016759 cellulose synthase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0030244 cellulose biosynthetic process;GO:0071555 cell wall organization;GO:0009832 plant-type cell wall biogenesis;GO:0009833 plant-type primary cell wall biogenesis;GO:0010192 mucilage biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8L778-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000010001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L785-1", "uniprot_id": [ { "id": "SYGM2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L785", "type": "external" } ], "mass": 119773.0, "length": 1067, "protein_name": "Glycine--tRNA ligase, chloroplastic/mitochondrial 2", "gene_name": "EDD1", "organism": "Arabidopsis", "refseq_name": "glycine-tRNA ligase", "refseq_ac": [ { "id": "NP_190394", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190394", "type": "external" } ], "gene_names_uniprotkb": "EDD1; T17F15.20", "gene_names_refseq": "EDD1; EDD; EMBRYO-DEFECTIVE-DEVELOPMENT 1; GLYCYL-TRNA SYNTHETASE", "protein_names_uniprotkb": "Glycine--tRNA ligase, chloroplastic/mitochondrial 2; 6.1.1.14; GlyRS-2; Glycyl-tRNA synthetase 2; Protein EMBRYO-DEFECTIVE-DEVELOPMENT 1", "protein_names_refseq": "glycine-tRNA ligase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48110)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;11278923;14593172;20466843;22791832;23572148;25732537;27862469;9707529", "class_list": "", "function": "Catalyzes the attachment of glycine to tRNA(Gly). Is also able produce diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23150;Q9SU73", "ec_number_list": [ { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "6.1.1.14", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.14", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046983 protein dimerization activity;GO:0004820 glycine-tRNA ligase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0045995 regulation of embryonic development;GO:0006426 glycyl-tRNA aminoacylation;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L785-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L796-1", "uniprot_id": [ { "id": "PI5K2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L796", "type": "external" } ], "mass": 86345.0, "length": 754, "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 2", "gene_name": "PIP5K2", "organism": "Arabidopsis", "refseq_name": "phosphatidylinositol-4-phosphate 5-kinase 2", "refseq_ac": [ { "id": "NP_001319397", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319397", "type": "external" } ], "gene_names_uniprotkb": "PIP5K2; T32E8.7", "gene_names_refseq": "PIP5K2; phosphatidylinositol-4-phosphate 5-kinase 2", "protein_names_uniprotkb": "Phosphatidylinositol 4-phosphate 5-kinase 2; 1-phosphatidylinositol 4-phosphate kinase 2; 2.7.1.68; AtPIP5K2; Diphosphoinositide kinase 2; PtdIns(4)P-5-kinase 2", "protein_names_refseq": "phosphatidylinositol-4-phosphate 5-kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77740)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;12226484;14593172;19903693;23328941;25561503;27862469", "class_list": "", "function": "Possesses phosphatidylinositol (PtdIns) phosphate kinase activity (Probable). Phosphorylates PtdIns(4)P and PtdIns(3)P in vitro (PubMed:19903693). Doesn't phosphorylate PtdIns(5)P nor PtdIns(3,4)P2 in vitro (PubMed:19903693). Does not exhibit phosphatidylinositol kinase activity in vitro (PubMed:19903693)., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9CA20", "ec_number_list": [ { "id": "2.7.1.68", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.68", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity;GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0003006 developmental process involved in reproduction;GO:0046854 phosphatidylinositol phosphate biosynthetic process;GO:0009958 positive gravitropism;GO:0010311 lateral root formation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L796-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7C2-1", "uniprot_id": [ { "id": "CFM2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7C2", "type": "external" } ], "mass": 113663.0, "length": 1011, "protein_name": "CRM-domain containing factor CFM2, chloroplastic", "gene_name": "CFM2", "organism": "Arabidopsis", "refseq_name": "CRM family member 2", "refseq_ac": [ { "id": "NP_186786", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186786", "type": "external" } ], "gene_names_uniprotkb": "CFM2; T13O15.1", "gene_names_refseq": "ATCFM2; Arabidopsis thaliana CRM family member 2; CFM2; CRM family member 2; T13O15.1; T13O15_1", "protein_names_uniprotkb": "CRM-domain containing factor CFM2, chloroplastic; AtCFM2; Protein CRM FAMILY MEMBER 2", "protein_names_refseq": "CRM family member 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01370)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;18065687;22060019;23776212;27862469", "class_list": "", "function": "Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM2 and CAF1 or CAF2. Can bind to and promote the splicing of the single group I intron in chloroplast tRNA transcript of trnL-UAA gene., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9SGI0", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:1990904 ribonucleoprotein complex;GO:0009507 chloroplast;GO:0009532 plastid stroma;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006397 mRNA processing;GO:0000373 Group II intron splicing;GO:0000372 Group I intron splicing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L7C2-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7C9-1", "uniprot_id": [ { "id": "GSTUK_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7C9", "type": "external" } ], "mass": 25006.0, "length": 217, "protein_name": "Glutathione S-transferase U20", "gene_name": "GSTU20", "organism": "Arabidopsis", "refseq_name": "glutathione S-transferase TAU 20", "refseq_ac": [ { "id": "NP_177958", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177958", "type": "external" } ], "gene_names_uniprotkb": "GSTU20; F3F9.11; FIP1", "gene_names_refseq": "ATGSTU20; F3F9.23; F3F9_23; GSTU20; glutathione S-transferase TAU 20", "protein_names_uniprotkb": "Glutathione S-transferase U20; 2.5.1.18; AtGSTU20; FIN219-interacting protein 1; GST class-tau member 20", "protein_names_refseq": "glutathione S-transferase TAU 20", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;12090627;14593172;16829588;17220357;23281391;25561503;27862469;28223489", "class_list": "", "function": "Exhibits glutathione-dependent thiol transferase activities. Can use glutathione (GSH) and 1-chloro-2,4-dinitrobenzene (CDNB) as substrates. Involved in the regulation of far-red light influence on development (PubMed:17220357). Regulator of the interplay between light and JA signaling by increasing JAR1/FIN219 efficiency (PubMed:28223489). Maybe involved in gravitropic signal transduction (Probable)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBS3;Q9M9F4", "ec_number_list": [ { "id": "2.5.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.18", "type": "external" }, { "id": "1.8.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.5.1", "type": "external" }, { "id": "5.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.-", "type": "external" } ], "go_molecular_function": "GO:0004364 glutathione transferase activity;GO:0043295 glutathione binding;GO:0019899 enzyme binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0009407 toxin catabolic process;GO:0009629 response to gravity;GO:0006749 glutathione metabolic process;GO:2000030 regulation of response to red or far red light", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L7C9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7E5-1", "uniprot_id": [ { "id": "WIT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7E5", "type": "external" } ], "mass": 79048.0, "length": 703, "protein_name": "WPP domain-interacting tail-anchored protein 1", "gene_name": "WIT1", "organism": "Arabidopsis", "refseq_name": "WPP domain-interacting protein 1", "refseq_ac": [ { "id": "NP_196700", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196700", "type": "external" } ], "gene_names_uniprotkb": "WIT1; F2I11.280", "gene_names_refseq": "F2I11.280; F2I11_280; WIT1; WPP domain-interacting protein 1", "protein_names_uniprotkb": "WPP domain-interacting tail-anchored protein 1", "protein_names_refseq": "WPP domain-interacting protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11390)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;14593172;18591351;19617588;20466843;23660473;23973298;25561503;25740919;25759303;27862469;28011693", "class_list": "", "function": "Together with WIT2, required for the nuclear envelope docking of RANGAP proteins in root tips., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFL8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0031965 nuclear membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8L7E5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7E9-1", "uniprot_id": [ { "id": "MCAC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7E9", "type": "external" } ], "mass": 48037.0, "length": 421, "protein_name": "Protein MID1-COMPLEMENTING ACTIVITY 1", "gene_name": "MCA1", "organism": "Arabidopsis", "refseq_name": "PLAC8 family protein", "refseq_ac": [ { "id": "NP_001329715", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329715", "type": "external" } ], "gene_names_uniprotkb": "MCA1; T19K4.50", "gene_names_refseq": "MCA1; T19K4.50; mid1-complementing activity 1", "protein_names_uniprotkb": "Protein MID1-COMPLEMENTING ACTIVITY 1", "protein_names_refseq": "PLAC8 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35920)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;14593172;17360695;19376835;19423640;20097794;23111157;25561503;27419465;27862469;29654922", "class_list": "", "function": "Calcium-permeable stretch-activated channel component. Involved in mechano-stimulated calcium uptake mechanism and in mechanosensing in the primary root., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65629;Q9ASR5", "ec_number_list": [], "go_molecular_function": "GO:0005262 calcium channel activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0033500 carbohydrate homeostasis;GO:0007231 osmosensory signaling pathway;GO:0007166 cell surface receptor signaling pathway;GO:0006816 calcium ion transport;GO:0071260 cellular response to mechanical stimulus", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8L7E9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7F7-1", "uniprot_id": [ { "id": "NUP62_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7F7", "type": "external" } ], "mass": 73482.0, "length": 739, "protein_name": "Nuclear pore complex protein NUP62", "gene_name": "NUP62", "organism": "Arabidopsis", "refseq_name": "structural constituent of nuclear pore", "refseq_ac": [ { "id": "NP_850429", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850429", "type": "external" } ], "gene_names_uniprotkb": "NUP62; EMB2766; T14P1.20", "gene_names_refseq": "AtNUP62; EMB2766; EMBRYO DEFECTIVE 2766; NUP62; T14P1.20; nucleoporin 62", "protein_names_uniprotkb": "Nuclear pore complex protein NUP62; NP62; Nucleoporin 62; Protein EMBRYO DEFECTIVE 2766", "protein_names_refseq": "structural constituent of nuclear pore", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45000)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;21189294;23582042;23840761;25561503;27862469;30833711", "class_list": "", "function": "", "predicted_glycosites": 10, "predicted_n_glycosites": 0, "predicted_o_glycosites": 10, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHD8", "ec_number_list": [], "go_molecular_function": "GO:0005543 phospholipid binding;GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0005829 cytosol;GO:0034399 nuclear periphery;GO:0044613 nuclear pore central transport channel;GO:0009507 chloroplast", "go_biological_process": "GO:0051028 mRNA transport;GO:0006405 RNA export from nucleus;GO:0006606 protein import into nucleus;GO:0010930 negative regulation of auxin mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8L7F7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7F9-1", "uniprot_id": [ { "id": "B3GTF_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7F9", "type": "external" } ], "mass": 72323.0, "length": 643, "protein_name": "Beta-1,3-galactosyltransferase GALT1", "gene_name": "GALT1", "organism": "Arabidopsis", "refseq_name": "galactosyltransferase1", "refseq_ac": [ { "id": "NP_001319087", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319087", "type": "external" } ], "gene_names_uniprotkb": "GALT1; B3GALT15; T24P13.20", "gene_names_refseq": "GALT1; T24P13.20; T24P13_20; galactosyltransferase1", "protein_names_uniprotkb": "Beta-1,3-galactosyltransferase GALT1; 2.4.1.-; Beta-1,3-galactosyltransferase 15; Galactosyltransferase 1", "protein_names_refseq": "galactosyltransferase1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G26810)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;17630273;18548197;23400704;24905498;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of N-glycans containing Lewis a structures (with the combination of FUT13)., [UniProtKB, PubMed]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "Q9LQX1;W8Q3R0", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0010488 UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0010493 Lewis a epitope biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L7F9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7K4-1", "uniprot_id": [ { "id": "HSCB_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7K4", "type": "external" } ], "mass": 28931.0, "length": 252, "protein_name": "Iron-sulfur cluster co-chaperone protein HscB homolog", "gene_name": "HSCB", "organism": "Arabidopsis", "refseq_name": "DNAJ heat shock N-terminal domain-containing protein", "refseq_ac": [ { "id": "NP_196259", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196259", "type": "external" } ], "gene_names_uniprotkb": "HSCB; MHF15.7", "gene_names_refseq": "MHF15.7; MHF15_7", "protein_names_uniprotkb": "Iron-sulfur cluster co-chaperone protein HscB homolog; AtHscB", "protein_names_refseq": "DNAJ heat shock N-terminal domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06410)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "14593172;19865480;27655366;27862469;9405937", "class_list": "", "function": "Co-chaperone required for the assembly of iron-sulfur [Fe-S] clusters in both mitochondria and cytosol (PubMed:19865480). Required for the activity of iron-sulfur proteins such as aconitase and succinate dehydrogenase (PubMed:19865480). Involved in iron homeostasis and may take part in the control of iron translocation from roots to shoots (PubMed:27655366)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FNG7", "ec_number_list": [], "go_molecular_function": "GO:0051087 protein-folding chaperone binding;GO:0001671 ATPase activator activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0051259 protein complex oligomerization;GO:0060586 multicellular organismal-level iron ion homeostasis;GO:0044571 [2Fe-2S] cluster assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L7K4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7K9-1", "uniprot_id": [ { "id": "MAO2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7K9", "type": "external" } ], "mass": 66641.0, "length": 607, "protein_name": "NAD-dependent malic enzyme 2, mitochondrial", "gene_name": "NAD-ME2", "organism": "Arabidopsis", "refseq_name": "NAD-dependent malic enzyme 2", "refseq_ac": [ { "id": "NP_191966", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191966", "type": "external" } ], "gene_names_uniprotkb": "NAD-ME2; F6N23.16", "gene_names_refseq": "F6N23.16; F6N23_16; NAD-ME2; NAD-dependent malic enzyme 2", "protein_names_uniprotkb": "NAD-dependent malic enzyme 2, mitochondrial; 1.1.1.39; AtNAD-ME2; NAD-malic enzyme 2", "protein_names_refseq": "NAD-dependent malic enzyme 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00570)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;14671022;18223148;20133948;20528775;21841088;22487558;27862469", "class_list": "", "function": "Involved in the regulation of sugars and amino acids metabolisms during the night period., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65266;Q9M162", "ec_number_list": [ { "id": "1.1.1.39", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.39", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0042803 protein homodimerization activity;GO:0051287 NAD binding;GO:0050897 cobalt ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0006108 malate metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L7K9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7L0-1", "uniprot_id": [ { "id": "OBGC_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7L0", "type": "external" } ], "mass": 75648.0, "length": 681, "protein_name": "GTP-binding protein OBGC, chloroplastic", "gene_name": "OBGL", "organism": "Arabidopsis", "refseq_name": "GTP1/OBG family protein", "refseq_ac": [ { "id": "NP_197358", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197358", "type": "external" } ], "gene_names_uniprotkb": "OBGL; EMB269; EMB3138; T28N17.50", "gene_names_refseq": "ATOBGC; ATOBGL; CPSAR1; EMB269; EMB3138; EMBRYO DEFECTIVE 269; EMBRYO DEFECTIVE 3138; OBG-like protein; T28N17.50; T28N17_50; chloroplastic SAR1", "protein_names_uniprotkb": "GTP-binding protein OBGC, chloroplastic; AtOBGC; AtOBGL; CPSAR1; GTP-binding protein OBG-like; Protein CHLOROPLASTIC SAR1; Protein EMBRYO DEFECTIVE 269; Protein EMBRYO DEFECTIVE 3138", "protein_names_refseq": "GTP1/OBG family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18570)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130714;14593172;18463617;19636801;19995735;20408996;20466843;21768351;22380942;23572148;23660473;23776212;25561503;26091701;27862469;28011693", "class_list": "", "function": "GTP-binding protein involved in membrane biogenesis and protein synthesis in chloroplast. Functions in the biogenesis of thylakoid membrane and plastid ribosome during chloroplast development. May be involved in the vesicular traffic between the chloroplast inner envelope membrane and thylakoids. Possesses GTPase activity in vitro., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0003729 mRNA binding;GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0009416 response to light stimulus;GO:0006364 rRNA processing;GO:0009658 chloroplast organization;GO:0009793 embryo development ending in seed dormancy;GO:0010027 thylakoid membrane organization", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8L7L0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7L1-1", "uniprot_id": [ { "id": "SPHK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7L1", "type": "external" } ], "mass": 53699.0, "length": 485, "protein_name": "Sphingosine kinase 1", "gene_name": "SPHK1", "organism": "Arabidopsis", "refseq_name": "sphingosine kinase 1", "refseq_ac": [ { "id": "NP_001320022", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320022", "type": "external" } ], "gene_names_uniprotkb": "SPHK1; F18E5.160", "gene_names_refseq": "F18E5.160; F18E5_160; SPHK1; sphingosine kinase 1", "protein_names_uniprotkb": "Sphingosine kinase 1; 2.7.1.91", "protein_names_refseq": "sphingosine kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21540)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;14593172;14993207;18557834;18643979;21330371;22275366;23111157;25561503;27862469", "class_list": "", "function": "Involved in the production of sphingolipid metabolites. Phosphorylates sphingosine and various sphingoid long-chain base (LCB) products, such as phytosphingosine (PHS, 4-hydroxysphinganine), 4-hydroxy-8-sphingenine, 4,8-sphingadienine, D-erythro-dihydrosphingosine and D,L-threo-dihydrosphingosine. Is required for abscisic acid (ABA) signaling that mediates stomatal closure, inhibition of seed germination and root elongation. May function upstream of PLDALPHA1 and phosphatidic acid (PA) in an amplification response to ABA that mediates stomatal closure., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2H1ZEN6;F4JJK0;O65419", "ec_number_list": [ { "id": "2.7.1.91", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.91", "type": "external" } ], "go_molecular_function": "GO:0001727 lipid kinase activity;GO:0005524 ATP binding;GO:0008481 sphingosine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0000325 plant-type vacuole;GO:0009507 chloroplast", "go_biological_process": "GO:0006665 sphingolipid metabolic process;GO:0046512 sphingosine biosynthetic process;GO:0009737 response to abscisic acid;GO:0009845 seed germination;GO:0071215 cellular response to abscisic acid stimulus", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8L7L1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7M0-1", "uniprot_id": [ { "id": "TUN_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7M0", "type": "external" } ], "mass": 52321.0, "length": 465, "protein_name": "UDP-glycosyltransferase TURAN", "gene_name": "TUN", "organism": "Arabidopsis", "refseq_name": "UDP-Glycosyltransferase superfamily protein", "refseq_ac": [ { "id": "NP_001117297", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117297", "type": "external" } ], "gene_names_uniprotkb": "TUN; F19K19.11", "gene_names_refseq": "F19K19.11; F19K19_11", "protein_names_uniprotkb": "UDP-glycosyltransferase TURAN; 2.4.1.-", "protein_names_refseq": "UDP-Glycosyltransferase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16570)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;24905498;25919390;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Required for pollen tube (PT) growth and integrity by affecting the stability of the pollen-specific ANX1 and ANX2 proteins. Involved in protein N-glycosylation in the endoplasmic reticulum (ER), especially in the female gametophyte. Mediates PT reception in synergids through protein glycosylation., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B3H5N4;Q9FX74", "ec_number_list": [], "go_molecular_function": "GO:0000030 mannosyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006487 protein N-linked glycosylation;GO:0010483 pollen tube reception;GO:0048868 pollen tube development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L7M0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7Q7-1", "uniprot_id": [ { "id": "PME64_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7Q7", "type": "external" } ], "mass": 65478.0, "length": 602, "protein_name": "Probable pectinesterase/pectinesterase inhibitor 64", "gene_name": "PME64", "organism": "Arabidopsis", "refseq_name": "Plant invertase/pectin methylesterase inhibitor superfamily", "refseq_ac": [ { "id": "NP_568991", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568991", "type": "external" } ], "gene_names_uniprotkb": "PME64; ARATH64; MUB3.16", "gene_names_refseq": "MUB3.16; MUB3_16", "protein_names_uniprotkb": "Probable pectinesterase/pectinesterase inhibitor 64; AtPME64; Pectin methylesterase 64; Pectin methylesterase inhibitor 64", "protein_names_refseq": "Plant invertase/pectin methylesterase inhibitor superfamily", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64640)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "14593172;15337457;16622707;27862469;9628582", "class_list": "", "function": "Acts in the modification of cell walls via demethylesterification of cell wall pectin., [UniProtKB]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "Q9FLF6", "ec_number_list": [ { "id": "3.1.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.11", "type": "external" }, { "id": "3.2.2.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.22", "type": "external" } ], "go_molecular_function": "GO:0030599 pectinesterase activity;GO:0046910 pectinesterase inhibitor activity", "go_cellular_component": "GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0045490 pectin catabolic process;GO:0042545 cell wall modification;GO:0052542 defense response by callose deposition", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L7Q7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7R2-1", "uniprot_id": [ { "id": "KHSE_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7R2", "type": "external" } ], "mass": 38529.0, "length": 370, "protein_name": "Homoserine kinase", "gene_name": "HSK", "organism": "Arabidopsis", "refseq_name": "homoserine kinase", "refseq_ac": [ { "id": "NP_179318", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179318", "type": "external" } ], "gene_names_uniprotkb": "HSK; DMR1; F5J6.24", "gene_names_refseq": "DMR1; DOWNY MILDEW RESISTANT 1; F5J6.24; F5J6_24; HOMOSERINE KINASE; HSK; homoserine kinase", "protein_names_uniprotkb": "Homoserine kinase; 2.7.1.39; Protein DOWNY MILDEW RESISTANT 1", "protein_names_refseq": "homoserine kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17265)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10562426;10617197;11910074;14593172;15703056;15986928;19622802;27862469;28011693;29654922", "class_list": "", "function": "Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate (PubMed:15703056). Is specific for L-homoserine and cannot use other substrates such D-serine, L-serine, D-threonine and L-threonine, galactose or D-homoserine in vitro. Required for susceptibility to the downy mildew pathogen Hyaloperonospora parasitica., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q7FLV1;Q9XEE0", "ec_number_list": [ { "id": "2.7.1.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.39", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004413 homoserine kinase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006952 defense response;GO:0009617 response to bacterium;GO:0009620 response to fungus;GO:0009086 methionine biosynthetic process;GO:0009088 threonine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8L7R2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7S6-1", "uniprot_id": [ { "id": "HEXO3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7S6", "type": "external" } ], "mass": 60014.0, "length": 535, "protein_name": "Beta-hexosaminidase 3", "gene_name": "HEXO3", "organism": "Arabidopsis", "refseq_name": "beta-hexosaminidase 3", "refseq_ac": [ { "id": "NP_176737", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176737", "type": "external" } ], "gene_names_uniprotkb": "HEXO3; F5I14.13; HEX1", "gene_names_refseq": "ATHEX1; F5I14.12; F5I14_12; HEXO3; beta-hexosaminidase 3", "protein_names_uniprotkb": "Beta-hexosaminidase 3; 3.2.1.52; AtHEX1; Beta-GlcNAcase 3; Beta-N-acetylhexosaminidase 3; Beta-hexosaminidase 1; N-acetyl-beta-glucosaminidase 3", "protein_names_refseq": "beta-hexosaminidase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65590)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;17636254;17644627;21252225;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Has a broad substrate specificity. Can use synthetic substrates such as pyridylaminated chitotriose, p-nitrophenyl-beta-N-acetylglucosaminide, p-nitrophenyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (pNP-GlcNAc), p-nitrophenyl-2-acetamido-2-deoxy-beta-D-galactopyranoside (pNP-GalNAc), 4-methylumbelliferyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc), and 4-methylumbelliferyl-6-sulfo-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc-6SO(4)) as substrates. Removes terminal GlcNAc residues from alpha1,3- and alpha1,6-mannosyl branches of biantennary N-glycans without any strict branch preference. Required for the presence of paucimannosidic N-glycans in glycoproteins of roots and leaves., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O04477", "ec_number_list": [], "go_molecular_function": "GO:0015929 hexosaminidase activity;GO:0004563 beta-N-acetylhexosaminidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0030203 glycosaminoglycan metabolic process;GO:0006491 N-glycan processing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L7S6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7S9-1", "uniprot_id": [ { "id": "TRXY2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7S9", "type": "external" } ], "mass": 18592.0, "length": 167, "protein_name": "Thioredoxin Y2, chloroplastic", "gene_name": "T10P12.4", "organism": "Arabidopsis", "refseq_name": "thioredoxin Y2", "refseq_ac": [ { "id": "NP_175021", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175021", "type": "external" } ], "gene_names_uniprotkb": "T10P12.4", "gene_names_refseq": "AT1G43565; Aty2; T10P12.4; T10P12_4; thioredoxin Y2; ty2", "protein_names_uniprotkb": "Thioredoxin Y2, chloroplastic; AtTrxy2", "protein_names_refseq": "thioredoxin Y2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G43560)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15531707;19259774;19825616;27862469", "class_list": "", "function": "Thiol-disulfide oxidoreductase that poorly activates chloroplastic malate dehydrogenase (NADP-MDH) and fructose-1,6-bisphosphatase. Provides reducing equivalents for peroxiredoxin Q., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9XIG4", "ec_number_list": [], "go_molecular_function": "GO:0008047 enzyme activator activity;GO:0015035 protein-disulfide reductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0043085 positive regulation of catalytic activity;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L7S9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7U5-1", "uniprot_id": [ { "id": "BSL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7U5", "type": "external" } ], "mass": 96146.0, "length": 881, "protein_name": "Serine/threonine-protein phosphatase BSL1", "gene_name": "BSL1", "organism": "Arabidopsis", "refseq_name": "BRI1 suppressor 1 (BSU1)-like 1", "refseq_ac": [ { "id": "NP_192217", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192217", "type": "external" } ], "gene_names_uniprotkb": "BSL1; T4I9.4", "gene_names_refseq": "BRI1 suppressor 1 (BSU1)-like 1; BSL1; T4I9.4; T4I9_4", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase BSL1; 3.1.3.16; BSU1-like protein 1", "protein_names_refseq": "BRI1 suppressor 1 (BSU1)-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G03080)", "pathway_count": 1, "publication_count": 24, "publication_id_list": "10617198;14593172;14977918;17317660;17368080;18463617;19245862;19376835;20466843;21768351;21855796;23111157;23328941;23572148;23660473;23776212;24601666;25561503;26091701;26187819;27862469;28011693;29167316;30833711", "class_list": "", "function": "Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZTA4", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0009742 brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 2.5, "record_id": "Q8L7U5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7W0-1", "uniprot_id": [ { "id": "SH3P3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7W0", "type": "external" } ], "mass": 39534.0, "length": 351, "protein_name": "SH3 domain-containing protein 3", "gene_name": "SH3P3", "organism": "Arabidopsis", "refseq_name": "SH3 domain-containing protein", "refseq_ac": [ { "id": "NP_193540", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193540", "type": "external" } ], "gene_names_uniprotkb": "SH3P3; F15J5.30", "gene_names_refseq": "F15J5.30; F15J5_30", "protein_names_uniprotkb": "SH3 domain-containing protein 3; AtSH3P3", "protein_names_refseq": "SH3 domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18060)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11701884;12207647;14593172;25699591;27862469;28584166", "class_list": "", "function": "May be involved in the recruitment of DRP2A to the accessory protein complex and in the negative regulation of its GTPase activity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W5A0;Q9SVW5", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0030136 clathrin-coated vesicle", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L7W0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7W8-1", "uniprot_id": [ { "id": "FUCO2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7W8", "type": "external" } ], "mass": 93725.0, "length": 843, "protein_name": "Alpha-L-fucosidase 2", "gene_name": "FUC95A", "organism": "Arabidopsis", "refseq_name": "1,2-alpha-L-fucosidase", "refseq_ac": [ { "id": "NP_195152", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195152", "type": "external" } ], "gene_names_uniprotkb": "FUC95A; AXY8; F10M10.30", "gene_names_refseq": "ALTERED XYLOGLUCAN 8; AXY8; F10M10.30; F10M10_30; FUC95A", "protein_names_uniprotkb": "Alpha-L-fucosidase 2; 3.2.1.51; Alpha-1,2-fucosidase 2; Alpha-L-fucosidase 95A; Alpha-L-fucoside fucohydrolase 2; AtFuc95A; Protein ALTERED XYLOGLUCAN 8", "protein_names_refseq": "1,2-alpha-L-fucosidase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34260)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;15262925;18495185;22080600;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Hydrolyzes alpha-1,2-linked fucose. Also active on fucosylated xyloglucan oligosaccharides. No activity with 3-fucosyllactose, p-nitrophenyl-alpha-I-fucopyranoside, lacto-N-fucopentaose II, lacto-N-fucopentaose III or alpha 1,6-fucosylated chitopentaose. Involved in apoplastic xyloglucan metabolism., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9SYZ1", "ec_number_list": [ { "id": "3.2.1.51", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.51", "type": "external" } ], "go_molecular_function": "GO:0004560 alpha-L-fucosidase activity;GO:0047513 1,2-alpha-L-fucosidase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0048046 apoplast", "go_biological_process": "GO:0005975 carbohydrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L7W8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L840-1", "uniprot_id": [ { "id": "RQL4A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L840", "type": "external" } ], "mass": 133312.0, "length": 1188, "protein_name": "ATP-dependent DNA helicase Q-like 4A", "gene_name": "RECQL4A", "organism": "Arabidopsis", "refseq_name": "DNA helicase (RECQl4A)", "refseq_ac": [ { "id": "NP_172562", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172562", "type": "external" } ], "gene_names_uniprotkb": "RECQL4A; RECQ4A; RQL4A; SGS1; T19D16.15", "gene_names_refseq": "ATRECQ4A; ATSGS1; RECQ4A; T19D16.15; T19D16_15", "protein_names_uniprotkb": "ATP-dependent DNA helicase Q-like 4A; 5.6.2.4; AtRecQ4A; AtRecQl4A; AtSGS1; DNA 3'-5' helicase RecQ4A; RecQ-like protein 4A; SGS1-like protein", "protein_names_refseq": "DNA helicase (RECQl4A)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10930)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11058127;11130712;12856935;14593172;16146519;16371241;18000056;19096507;21265901;24265739;27862469", "class_list": "", "function": "DNA helicase involved in DNA repair (PubMed:16146519, PubMed:18000056, PubMed:19096507). Probably unwinds DNA in the 3'-5' direction (By similarity). Required for the maintenance of genome stability by modulation of the DNA damage response and repression of crossovers. Confers resistance to genotoxic stress (PubMed:16146519, PubMed:18000056). Suppresses spontaneous homologous recombination (HR) events in somatic cells together with its partners RMI1 and TOP3A (PubMed:19096507). Contributes to the maintenance of chromosome integrity during meiosis. Involved in the removal of telomeric bridges that appear to arise during meiotic recombination. Required to resolve or dissolve MSH4-dependent telomeric associations. Does not seem required for chiasma formation (PubMed:21265901)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O04092;Q9FT71", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0043138 3'-5' DNA helicase activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005694 chromosome;GO:0009506 plasmodesma", "go_biological_process": "GO:0070417 cellular response to cold;GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0006260 DNA replication;GO:0006974 DNA damage response", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8L840-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L844-1", "uniprot_id": [ { "id": "PP413_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L844", "type": "external" } ], "mass": 80003.0, "length": 709, "protein_name": "Pentatricopeptide repeat-containing protein At5g42310, chloroplastic", "gene_name": "CRP1", "organism": "Arabidopsis", "refseq_name": "Pentatricopeptide repeat (PPR-like) superfamily protein", "refseq_ac": [ { "id": "NP_199046", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199046", "type": "external" } ], "gene_names_uniprotkb": "CRP1; K5J14.11", "gene_names_refseq": "K5J14.11; K5J14_11", "protein_names_uniprotkb": "Pentatricopeptide repeat-containing protein At5g42310, chloroplastic; AtCRP1; Protein CRP1 homolog", "protein_names_refseq": "Pentatricopeptide repeat (PPR-like) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42310)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;14593172;15269332;27862469;28261232;30962391", "class_list": "", "function": "Required for chloroplast protein synthesis and accumulation of subunits of the thylakoid protein complexes. Activates psaC and petA translation by binding their 5'-UTRs. Required for the correct processing of petB and petD mRNAs. Interacts with the petB and petD intergenic region and is required for the generation of petB and petD monocistronic RNAs., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGZ8", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003727 single-stranded RNA binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009570 chloroplast stroma;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006397 mRNA processing;GO:0006417 regulation of translation;GO:0009658 chloroplast organization;GO:0010239 chloroplast mRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L844-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L850-1", "uniprot_id": [ { "id": "PI5K9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L850", "type": "external" } ], "mass": 92092.0, "length": 815, "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 9", "gene_name": "PIP5K9", "organism": "Arabidopsis", "refseq_name": "phosphatidyl inositol monophosphate 5 kinase", "refseq_ac": [ { "id": "NP_001030666", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030666", "type": "external" } ], "gene_names_uniprotkb": "PIP5K9; F8A24.2", "gene_names_refseq": "PIP5K9; phosphatidyl inositol monophosphate 5 kinase", "protein_names_uniprotkb": "Phosphatidylinositol 4-phosphate 5-kinase 9; 1-phosphatidylinositol 4-phosphate kinase 9; 2.7.1.68; AtPIP5K9; Diphosphoinositide kinase 9; PtdIns(4)P-5-kinase 9", "protein_names_refseq": "phosphatidyl inositol monophosphate 5 kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G09920)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;12226484;14593172;17220200;25561503;27862469;28011693", "class_list": "", "function": "Plays a role in sugar-mediated root development. Interaction with CINV1 induces repression of CINV1 activity and negative regulation of sugar-mediated root cell elongation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WMK5;Q9SF93", "ec_number_list": [ { "id": "2.7.1.68", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.68", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0006520 amino acid metabolic process;GO:0046854 phosphatidylinositol phosphate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L850-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L866-1", "uniprot_id": [ { "id": "CUAOZ_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L866", "type": "external" } ], "mass": 86691.0, "length": 776, "protein_name": "Amine oxidase [copper-containing] zeta, peroxisomal", "gene_name": "CuAOzeta", "organism": "Arabidopsis", "refseq_name": "Copper amine oxidase family protein", "refseq_ac": [ { "id": "NP_181777", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181777", "type": "external" } ], "gene_names_uniprotkb": "CuAOzeta; CuAO1; CuAO3; F14N22.1; MHK10.21", "gene_names_refseq": "MHK10.21; MHK10_21", "protein_names_uniprotkb": "Amine oxidase [copper-containing] zeta, peroxisomal; 1.4.3.21; AtCuAO1; AtCuAO3; AtCuAOzeta; Copper amine oxidase 3", "protein_names_refseq": "Copper amine oxidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42490)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;23915037;24287136;27862469;31862580", "class_list": "", "function": "Involved in putrescine catabolism in peroxisomes (PubMed:24287136). Copper amine oxidase that can use putrescine and spermidine as substrates (PubMed:23915037)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q56W61;Q9SLB1", "ec_number_list": [ { "id": "1.4.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:1.4.3.21", "type": "external" } ], "go_molecular_function": "GO:0005507 copper ion binding;GO:0008131 primary methylamine oxidase activity;GO:0048038 quinone binding;GO:0052595 aliphatic amine oxidase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0009611 response to wounding;GO:0009308 amine metabolic process;GO:0009447 putrescine catabolic process;GO:0002237 response to molecule of bacterial origin;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L866-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L8A7-1", "uniprot_id": [ { "id": "GRF4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L8A7", "type": "external" } ], "mass": 42534.0, "length": 380, "protein_name": "Growth-regulating factor 4", "gene_name": "GRF4", "organism": "Arabidopsis", "refseq_name": "growth-regulating factor 4", "refseq_ac": [ { "id": "NP_190859", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190859", "type": "external" } ], "gene_names_uniprotkb": "GRF4; F8J2_80", "gene_names_refseq": "AtGRF4; GRF4; growth-regulating factor 4", "protein_names_uniprotkb": "Growth-regulating factor 4; AtGRF4; Transcription activator GRF4", "protein_names_refseq": "growth-regulating factor 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G52910)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12974814;15200956;19453503;20023165;27862469", "class_list": "", "function": "Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFA0", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L8A7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L8A8-1", "uniprot_id": [ { "id": "GRF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L8A8", "type": "external" } ], "mass": 58585.0, "length": 535, "protein_name": "Growth-regulating factor 2", "gene_name": "GRF2", "organism": "Arabidopsis", "refseq_name": "growth-regulating factor 2", "refseq_ac": [ { "id": "NP_195488", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195488", "type": "external" } ], "gene_names_uniprotkb": "GRF2; T28I19.20", "gene_names_refseq": "AtGRF2; GRF2; T28I19.20; T28I19_20; growth-regulating factor 2", "protein_names_uniprotkb": "Growth-regulating factor 2; AtGRF2; Transcription activator GRF2", "protein_names_refseq": "growth-regulating factor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37740)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;12974814;15200956;15326298;19453503;20023165;21036927;27862469;28011693", "class_list": "", "function": "Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Component of a network formed by miR396, the GRFs and their interacting factors (GIFs) acting in the regulation of meristem function, at least partially through the control of cell proliferation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9T063", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0008285 negative regulation of cell population proliferation;GO:0006355 regulation of DNA-templated transcription;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L8A8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L8Q7-1", "uniprot_id": [ { "id": "COBL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L8Q7", "type": "external" } ], "mass": 49697.0, "length": 441, "protein_name": "COBRA-like protein 2", "gene_name": "COBL2; COBL3", "organism": "Arabidopsis", "refseq_name": "COBRA-like protein 2 precursor", "refseq_ac": [ { "id": "NP_566851", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566851", "type": "external" } ], "gene_names_uniprotkb": "COBL2; COBL3; F21N10.4; K17E7.7", "gene_names_refseq": "COBL2; COBRA-like protein 2 precursor", "protein_names_uniprotkb": "COBRA-like protein 2", "protein_names_refseq": "COBRA-like protein 2 precursor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G29810)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10907853;11130712;12376623;27862469", "class_list": "", "function": "", "predicted_glycosites": 10, "predicted_n_glycosites": 9, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "Q9FWK1;Q9LJ49", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005797 Golgi medial cisterna;GO:0098552 side of membrane", "go_biological_process": "GO:0009664 plant-type cell wall organization;GO:0009832 plant-type cell wall biogenesis;GO:0010214 seed coat development;GO:0010215 cellulose microfibril organization;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8L8Q7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L9A0-1", "uniprot_id": [ { "id": "RM21_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L9A0", "type": "external" } ], "mass": 30908.0, "length": 270, "protein_name": "Large ribosomal subunit protein bL21m", "gene_name": "RPL21M", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein L21", "refseq_ac": [ { "id": "NP_567861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567861", "type": "external" } ], "gene_names_uniprotkb": "RPL21M; F6I18.160; NFD1", "gene_names_refseq": "AT4G30925; NFD1; NUCLEAR FUSION DEFECTIVE 1", "protein_names_uniprotkb": "Large ribosomal subunit protein bL21m; 50S ribosomal protein L21, mitochondrial; Protein NUCLEAR FUSION DEFECTIVE 1", "protein_names_refseq": "Ribosomal protein L21", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30930)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11675010;14593172;16698901;26187819;27862469;36423343", "class_list": "", "function": "This protein binds to 23S ribosomal RNA in the presence of protein L20 (By similarity). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus, and during double fertilization of the egg cell and the central cell (PubMed:16698901)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65556;Q0WRT4;Q9B7N7", "ec_number_list": [], "go_molecular_function": "GO:0000976 transcription cis-regulatory region binding;GO:0019843 rRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006412 translation;GO:0000741 karyogamy;GO:0009553 embryo sac development;GO:0009555 pollen development;GO:0009567 double fertilization forming a zygote and endosperm", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8L9A0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L9C4-1", "uniprot_id": [ { "id": "KCR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L9C4", "type": "external" } ], "mass": 35762.0, "length": 318, "protein_name": "Very-long-chain 3-oxoacyl-CoA reductase 1", "gene_name": "KCR1", "organism": "Arabidopsis", "refseq_name": "beta-ketoacyl reductase 1", "refseq_ac": [ { "id": "NP_564905", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564905", "type": "external" } ], "gene_names_uniprotkb": "KCR1; At-YBR159; F12A21.31; GL8", "gene_names_refseq": "ATKCR1; F12A21.14; F12A21_14; KCR1; YBR159; beta-ketoacyl reductase 1", "protein_names_uniprotkb": "Very-long-chain 3-oxoacyl-CoA reductase 1; 1.1.1.330; AtKCR1; Beta-ketoacyl reductase 1; Protein GLOSSY 8; gl8At", "protein_names_refseq": "beta-ketoacyl reductase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67730)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11792704;14593172;19439572;27862469;9342868", "class_list": "", "function": "Beta-ketoacyl-coenzyme A reductase required for the elongation of fatty acids precursors of sphingolipids, triacylglycerols, cuticular waxes and suberin. Responsible for the first reduction step in very long-chain fatty acids (VLCFAs) synthesis. Decreased expression of KCR1 (RNAi) leads to plants with fused vegetative and reproductive organs, and abnormal trichome, epidermal cell and root morphology. Cannot be complemented by KCR2., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O24481;Q8H1N9;Q9AST7", "ec_number_list": [ { "id": "1.1.1.330", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.330", "type": "external" } ], "go_molecular_function": "GO:0045703 ketoreductase activity;GO:0018454 acetoacetyl-CoA reductase activity;GO:0141040 very-long-chain 3-oxoacyl-CoA reductase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0042761 very long-chain fatty acid biosynthetic process;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L9C4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L9Y2-1", "uniprot_id": [ { "id": "ELP6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L9Y2", "type": "external" } ], "mass": 29125.0, "length": 262, "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "organism": "Arabidopsis", "refseq_name": "elongator protein 6", "refseq_ac": [ { "id": "NP_567351", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567351", "type": "external" } ], "gene_names_uniprotkb": "ELP6; F28M11.10", "gene_names_refseq": "ELP6; F28M11.10; F28M11_10; elongator protein 6", "protein_names_uniprotkb": "Elongator complex protein 6; AtELP6; Elongator component 6; UPF0405 protein ELP6", "protein_names_refseq": "elongator protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G10090)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;19423640;19500300;20080602;27862469", "class_list": "", "function": "Component of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine) (By similarity). The elongator complex catalyzes formation of carboxymethyluridine in the wobble base at position 34 in tRNAs (By similarity). Promotes organ development by modulating cell division rate. Involved in oxidative stress signaling. Prevents anthocyanins accumulation (PubMed:19500300)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z343;Q9SN32", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0033588 elongator holoenzyme complex", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0008284 positive regulation of cell population proliferation;GO:0002098 tRNA wobble uridine modification;GO:0009926 auxin polar transport;GO:0010015 root morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8L9Y2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LA16-1", "uniprot_id": [ { "id": "ALFL7_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LA16", "type": "external" } ], "mass": 28286.0, "length": 252, "protein_name": "PHD finger protein ALFIN-LIKE 7", "gene_name": "AL7", "organism": "Arabidopsis", "refseq_name": "alfin-like 7", "refseq_ac": [ { "id": "NP_172903", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172903", "type": "external" } ], "gene_names_uniprotkb": "AL7; F14L17.29; T5E21.1", "gene_names_refseq": "AL7; AtAL7; F14L17.29; F14L17_29; alfin-like 7", "protein_names_uniprotkb": "PHD finger protein ALFIN-LIKE 7; Protein AL7", "protein_names_refseq": "alfin-like 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14510)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;19154204;19376835;25561503;27862469;28011693", "class_list": "", "function": "Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M9R2;Q9MA31", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0042393 histone binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LA16-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAC4-1", "uniprot_id": [ { "id": "URH2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAC4", "type": "external" } ], "mass": 34668.0, "length": 322, "protein_name": "Probable uridine nucleosidase 2", "gene_name": "URH2", "organism": "Arabidopsis", "refseq_name": "uridine-ribohydrolase 2", "refseq_ac": [ { "id": "NP_001117234", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117234", "type": "external" } ], "gene_names_uniprotkb": "URH2; F3F20.7; NSH2", "gene_names_refseq": "F3F20.7; F3F20_7; NSH2; URH2; nucleoside hydrolase 2; uridine-ribohydrolase 2", "protein_names_uniprotkb": "Probable uridine nucleosidase 2; 3.2.2.-; 3.2.2.2; 3.2.2.3; Inosine nucleosidase; Nucleoside hydrolase 2; Uridine ribohydrolase 2; Xanthosine nucleosidase", "protein_names_refseq": "uridine-ribohydrolase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G05620)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;19293370;21235647;21599668;27862469;30787180", "class_list": "", "function": "Involved in pyrimidine breakdown, especially in response to dark stress (PubMed:21599668, PubMed:30787180). In the presence of URH1, exhibits efficient inosine and xanthosine hydrolytic activities (PubMed:21599668, PubMed:30787180). Support inosine breakdown especially during the late phase of senescence (PubMed:21235647)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H6Y7;Q9SYK3", "ec_number_list": [ { "id": "3.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.-", "type": "external" }, { "id": "3.2.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.3", "type": "external" }, { "id": "3.2.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.2", "type": "external" }, { "id": "3.2.2.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.1", "type": "external" }, { "id": "3.2.2.7", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.7", "type": "external" } ], "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:0035251 UDP-glucosyltransferase activity;GO:0008477 purine nucleosidase activity;GO:0045437 uridine nucleosidase activity;GO:0047724 inosine nucleosidase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0006148 inosine catabolic process;GO:0006152 purine nucleoside catabolic process;GO:0010150 leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LAC4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAD7-1", "uniprot_id": [ { "id": "IDA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAD7", "type": "external" } ], "mass": 8433.0, "length": 77, "protein_name": "Protein IDA", "gene_name": "IDA", "organism": "Arabidopsis", "refseq_name": "Putative membrane lipoprotein", "refseq_ac": [ { "id": "NP_564941", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564941", "type": "external" } ], "gene_names_uniprotkb": "IDA; F14K14", "gene_names_refseq": "IDA; INFLORESCENCE DEFICIENT IN ABSCISSION", "protein_names_uniprotkb": "Protein IDA; Protein INFLORESCENCE DEFICIENT IN ABSCISSION", "protein_names_refseq": "Putative membrane lipoprotein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G68765)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;12972671;16990374;18660431;23963677;27058169;27862469", "class_list": "", "function": "Involved in an ethylene-independent separation step of floral abscission (PubMed:18660431, PubMed:23963677, PubMed:27058169). Promotes abscission zone (AZ) cells rounding (PubMed:23963677, PubMed:27058169). May act with RLK5 and HSL2 as ligand-receptor pairs (PubMed:18660431)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0050829 defense response to Gram-negative bacterium;GO:0010468 regulation of gene expression;GO:0060305 regulation of cell diameter;GO:0045490 pectin catabolic process;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LAD7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAR0-1", "uniprot_id": [ { "id": "B2DXI_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAR0", "type": "external" } ], "mass": 39819.0, "length": 365, "protein_name": "Protein BIIDXI", "gene_name": "BDX", "organism": "Arabidopsis", "refseq_name": "choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)", "refseq_ac": [ { "id": "NP_001329630", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329630", "type": "external" } ], "gene_names_uniprotkb": "BDX; ATHA1-1; F8B4.160", "gene_names_refseq": "F8B4.160; F8B4_160", "protein_names_uniprotkb": "Protein BIIDXI", "protein_names_refseq": "choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32460)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;22361214;25442819;27862469;29137987;29238286;30253266", "class_list": "", "function": "Together with At5g11420, acts as a positive regulator of PME3 activity during several developmental processes, including reproductive organ development, hypocotyls elongation, seed germination and endosperm (testa) rupture at the micropyle, probably by modulating the pectin methylation status in cell walls (PubMed:25442819). Involved in the regulation of pectin methylation degree to modulate cell wall physiology during cell separation, hypocotyl growth and embryo development (PubMed:29137987, PubMed:29238286, PubMed:30253266). Required during embryo development, especially to regulate homogalacturonans (HG) methyl esterification in endosperm cell walls, a process related to embryo bending (PubMed:29137987). Also implicated in hypocotyl growth and gravitropic response via the regulation of auxin efflux (PubMed:30253266). Also regulates cell wall pectin upon root-knot nematode Meloidogyne incognita infection (PubMed:29238286)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWU1;Q9SUU6", "ec_number_list": [], "go_molecular_function": "GO:0030234 enzyme regulator activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0048598 embryonic morphogenesis;GO:0009624 response to nematode;GO:0048608 reproductive structure development;GO:0009630 gravitropism;GO:0009664 plant-type cell wall organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LAR0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAS8-1", "uniprot_id": [ { "id": "SFGH_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAS8", "type": "external" } ], "mass": 31656.0, "length": 284, "protein_name": "S-formylglutathione hydrolase", "gene_name": "SFGH", "organism": "Arabidopsis", "refseq_name": "S-formylglutathione hydrolase", "refseq_ac": [ { "id": "NP_181684", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181684", "type": "external" } ], "gene_names_uniprotkb": "SFGH; T32G6.5", "gene_names_refseq": "ARABIDOPSIS THALIANA S-FORMYLGLUTATHIONE HYDROLASE; ATSFGH; S-formylglutathione hydrolase; SFGH; T32G6.5; T32G6_5", "protein_names_uniprotkb": "S-formylglutathione hydrolase; 3.1.2.12; AtSFGH; Esterase D", "protein_names_refseq": "S-formylglutathione hydrolase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41530)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;11888210;14593172;14646092;16626737;22223895;25561503;27862469", "class_list": "", "function": "Serine hydrolase which catalyzes the hydrolysis of S-formylglutathione to glutathione and formic acid (Probable). Also hydrolyzes S-acetylglutathione and a range of carboxyesters in vitro (PubMed:11888210). Involved in the detoxification of formaldehyde (PubMed:16626737)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22215", "ec_number_list": [ { "id": "3.1.2.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.2.12", "type": "external" } ], "go_molecular_function": "GO:0052689 carboxylic ester hydrolase activity;GO:0018738 S-formylglutathione hydrolase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0048046 apoplast", "go_biological_process": "GO:0046294 formaldehyde catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LAS8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LB08-1", "uniprot_id": [ { "id": "ADT4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LB08", "type": "external" } ], "mass": 33788.0, "length": 306, "protein_name": "ADP/ATP translocase ER-ANT1", "gene_name": "ER-ANT1", "organism": "Arabidopsis", "refseq_name": "endoplasmic reticulum-adenine nucleotide transporter 1", "refseq_ac": [ { "id": "NP_568345", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568345", "type": "external" } ], "gene_names_uniprotkb": "ER-ANT1; T10B6_60", "gene_names_refseq": "ER-ANT1; T10B6.60; T10B6_60; endoplasmic reticulum-adenine nucleotide transporter 1", "protein_names_uniprotkb": "ADP/ATP translocase ER-ANT1; ADP,ATP carrier protein ER-ANT1; ER-ANT1; Endoplasmic reticulum-adenine nucleotide transporter 1", "protein_names_refseq": "endoplasmic reticulum-adenine nucleotide transporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G17400)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;15003237;18296626;27862469", "class_list": "", "function": "ADP:ATP antiporter that catalyzes the exchange of ADP and ATP across the endoplasmic reticulum membrane., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KGZ7;Q9LF44", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0005471 ATP:ADP antiporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005789 endoplasmic reticulum membrane;GO:0005757 mitochondrial permeability transition pore complex", "go_biological_process": "GO:0046902 regulation of mitochondrial membrane permeability;GO:0051503 adenine nucleotide transport;GO:0140021 mitochondrial ADP transmembrane transport;GO:1990544 mitochondrial ATP transmembrane transport;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8LB08-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LB10-1", "uniprot_id": [ { "id": "CLPR4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LB10", "type": "external" } ], "mass": 33440.0, "length": 305, "protein_name": "ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic", "gene_name": "CLPR4", "organism": "Arabidopsis", "refseq_name": "CLP protease R subunit 4", "refseq_ac": [ { "id": "NP_567521", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567521", "type": "external" } ], "gene_names_uniprotkb": "CLPR4; FCAALL.413; HON5; dl4550c", "gene_names_refseq": "CLP protease R subunit 4; CLPR4; DL4550C; FCAALL.413; HON5; happy on norflurazon 5", "protein_names_uniprotkb": "ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic; ClpR4; Protein HAPPY ON NORFLURAZON 5", "protein_names_refseq": "CLP protease R subunit 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G17040)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;11299370;11910074;14593120;14593172;16766689;16980539;19525416;21208309;21712416;22085372;27862469;9461215", "class_list": "", "function": "Involved in plastid protein homeostasis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23548;Q8RXG1", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0051117 ATPase binding;GO:0004176 ATP-dependent peptidase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009368 endopeptidase Clp complex;GO:0009507 chloroplast;GO:0009532 plastid stroma;GO:0009536 plastid", "go_biological_process": "GO:0000302 response to reactive oxygen species;GO:0010468 regulation of gene expression;GO:0006515 protein quality control for misfolded or incompletely synthesized proteins", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8LB10-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LB47-1", "uniprot_id": [ { "id": "MGE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LB47", "type": "external" } ], "mass": 36116.0, "length": 327, "protein_name": "GrpE protein homolog 2, mitochondrial", "gene_name": "Mge2", "organism": "Arabidopsis", "refseq_name": "Co-chaperone GrpE family protein", "refseq_ac": [ { "id": "NP_567757", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567757", "type": "external" } ], "gene_names_uniprotkb": "Mge2; AR192; F10M23.120", "gene_names_refseq": "AR192; F10M23.120; F10M23_120; MGE2; mitochondrial GrpE 2", "protein_names_uniprotkb": "GrpE protein homolog 2, mitochondrial", "protein_names_refseq": "Co-chaperone GrpE family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26780)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11910074;14593172;20018591;22128139;27862469;30833711;9287109", "class_list": "", "function": "Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (By similarity). Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins (By similarity). Binds ATP (By similarity). Interacts with copper ions Cu(2+) (PubMed:20018591). Confers thermotolerance to long-term exposure at moderately high temperature (TMHT at 35 degrees Celsius) (PubMed:22128139)., [UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q96515;Q9SZ18", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042803 protein homodimerization activity;GO:0051082 unfolded protein binding;GO:0051087 protein-folding chaperone binding;GO:0005507 copper ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0001405 PAM complex, Tim23 associated import motor;GO:0009507 chloroplast", "go_biological_process": "GO:0006457 protein folding;GO:0009408 response to heat;GO:0030150 protein import into mitochondrial matrix;GO:0010286 heat acclimation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LB47-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LBA6-1", "uniprot_id": [ { "id": "PIS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LBA6", "type": "external" } ], "mass": 25861.0, "length": 227, "protein_name": "CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1", "gene_name": "PIS1", "organism": "Arabidopsis", "refseq_name": "phosphatidylinositol synthase 1", "refseq_ac": [ { "id": "NP_176967", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176967", "type": "external" } ], "gene_names_uniprotkb": "PIS1; T23K23.15", "gene_names_refseq": "ATPIS1; ATPIS; PHOSPHATIDYLINOSITOL SYNTHASE; PIS1; T23K23.15; T23K23_15; phosphatidylinositol synthase 1", "protein_names_uniprotkb": "CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1; 2.7.8.11; AtPIS1; PI synthase 1; Phosphatidylinositol synthase 1; PtdIns synthase 1", "protein_names_refseq": "phosphatidylinositol synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G68000)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10411624;10809447;11130712;11985617;14563413;14593172;27862469", "class_list": "", "function": "Catalyzes the biosynthesis of phosphatidylinositol (PtdIns) as well as PtdIns:inositol exchange reaction. May thus act to reduce an excessive cellular PtdIns content. The exchange activity is due to the reverse reaction of PtdIns synthase and is dependent on CMP, which is tightly bound to the enzyme., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81846", "ec_number_list": [ { "id": "2.7.8.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.8.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003881 CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0006661 phosphatidylinositol biosynthetic process;GO:0008654 phospholipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LBA6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LBL1-1", "uniprot_id": [ { "id": "KCO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LBL1", "type": "external" } ], "mass": 40727.0, "length": 363, "protein_name": "Two-pore potassium channel 1", "gene_name": "TPK1", "organism": "Arabidopsis", "refseq_name": "Outward rectifying potassium channel protein", "refseq_ac": [ { "id": "NP_200374", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200374", "type": "external" } ], "gene_names_uniprotkb": "TPK1; KCO1; MDF20.7", "gene_names_refseq": "ATKCO1; ATTPK1; CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 1; KCO1; MDF20.7; MDF20_7; TANDEM PORE K+ CHANNEL 1; TPK1; TWO PORE K CHANNEL 1; TWO PORE K CHANNEL", "protein_names_uniprotkb": "Two-pore potassium channel 1; AtKCO1; AtTPK1; Calcium-activated outward-rectifying potassium channel 1", "protein_names_refseq": "Outward rectifying potassium channel protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G55630)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11500563;11821043;12148538;15505206;16113216;16984403;17563365;17764516;19825594;21697507;25561503;27862469;9184204;9628582", "class_list": "", "function": "Voltage-independent, large conductance and potassium-selective tonoplast ion channel. Regulated by cytoplasmic calcium and pH. Does not mediate slow-vacuolar (SV) ionic currents, but essential to establish VK currents. Has some permeability for Rb(+) and NH(4)(+), but none for Na(+), Cs(+) or Li(+). Involved in intracellular K(+) redistribution and/or K(+) retranslocation between different tissues., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04718;Q0WNY4;Q9FM75", "ec_number_list": [], "go_molecular_function": "GO:0015271 outward rectifier potassium channel activity;GO:0022841 potassium ion leak channel activity;GO:0005216 monoatomic ion channel activity;GO:0046872 metal ion binding;GO:0015269 calcium-activated potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005774 vacuolar membrane;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0030007 intracellular potassium ion homeostasis;GO:1990573 potassium ion import across plasma membrane;GO:0071257 cellular response to electrical stimulus;GO:0071805 potassium ion transmembrane transport;GO:0097623 potassium ion export across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8LBL1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LBX7-1", "uniprot_id": [ { "id": "TED6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LBX7", "type": "external" } ], "mass": 13007.0, "length": 116, "protein_name": "Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6", "gene_name": "TED6", "organism": "Arabidopsis", "refseq_name": "tracheary element differentiation-related 6", "refseq_ac": [ { "id": "NP_564487", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564487", "type": "external" } ], "gene_names_uniprotkb": "TED6; F28H19.19", "gene_names_refseq": "F28H19.19; F28H19_19; TED6; tracheary element differentiation-related 6", "protein_names_uniprotkb": "Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6", "protein_names_refseq": "tracheary element differentiation-related 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G43790)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;19383897;27862469", "class_list": "", "function": "Involved in the secondary cell wall (SCW) formation of vessel elements (e.g. protoxylem and metaxylem), thus promoting tracheary element (TE) differentiation., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009505 plant-type cell wall;GO:0044568 secondary cell wall cellulose synthase complex", "go_biological_process": "GO:0071555 cell wall organization;GO:0009834 plant-type secondary cell wall biogenesis;GO:1905177 tracheary element differentiation;GO:2000652 regulation of secondary cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q8LBX7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LBZ7-1", "uniprot_id": [ { "id": "SDHB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LBZ7", "type": "external" } ], "mass": 31171.0, "length": 279, "protein_name": "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial", "gene_name": "SDH2-1", "organism": "Arabidopsis", "refseq_name": "succinate dehydrogenase 2-1", "refseq_ac": [ { "id": "NP_001118718", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118718", "type": "external" } ], "gene_names_uniprotkb": "SDH2-1; K1G2.9", "gene_names_refseq": "SDH2-1; succinate dehydrogenase 2-1", "protein_names_uniprotkb": "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial; 1.3.5.1; Ip; Iron-sulfur subunit of complex II", "protein_names_refseq": "succinate dehydrogenase 2-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G27380)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10819329;11442063;12970493;14593172;14671022;15563621;15604729;27862469", "class_list": "", "function": "Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9G3M0;Q9LTZ2", "ec_number_list": [ { "id": "1.3.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.5.1", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0009055 electron transfer activity;GO:0051538 3 iron, 4 sulfur cluster binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005829 cytosol;GO:0045273 respiratory chain complex II (succinate dehydrogenase)", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0022904 respiratory electron transport chain;GO:0009060 aerobic respiration;GO:0006121 mitochondrial electron transport, succinate to ubiquinone", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LBZ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LC03-1", "uniprot_id": [ { "id": "ATB13_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LC03", "type": "external" } ], "mass": 33342.0, "length": 294, "protein_name": "Homeobox-leucine zipper protein ATHB-13", "gene_name": "ATHB-13", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ATHB-13; T6C23.2", "gene_names_refseq": "", "protein_names_uniprotkb": "Homeobox-leucine zipper protein ATHB-13; HD-ZIP protein ATHB-13; Homeodomain transcription factor ATHB-13", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69780)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11292072;14593172;16055682;27862469", "class_list": "", "function": "Probable transcription factor that may act in the sucrose-signaling pathway., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9S7A4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009744 response to sucrose;GO:0009965 leaf morphogenesis;GO:0048826 cotyledon morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8LC03-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LC45-1", "uniprot_id": [ { "id": "XTH33_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LC45", "type": "external" } ], "mass": 34644.0, "length": 310, "protein_name": "Probable xyloglucan endotransglucosylase/hydrolase protein 33", "gene_name": "XTH33", "organism": "Arabidopsis", "refseq_name": "xyloglucan:xyloglucosyl transferase 33", "refseq_ac": [ { "id": "NP_172525", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172525", "type": "external" } ], "gene_names_uniprotkb": "XTH33; T10O24.17", "gene_names_refseq": "T10O24.17; T10O24_17; XET; XTH33; XYLOGLUCAN ENDOTRANSGLYCOSYLASE; XYLOGLUCAN:XYLOGLUCOSYL TRANSFERASE 33; xyloglucan:xyloglucosyl transferase 33", "protein_names_uniprotkb": "Probable xyloglucan endotransglucosylase/hydrolase protein 33; 2.4.1.207; At-XTH33; XTH-33", "protein_names_refseq": "xyloglucan:xyloglucosyl transferase 33", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10550)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11673616;12514239;18375658;19154201;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9XIJ7", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762 xyloglucan:xyloglucosyl transferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:0042546 cell wall biogenesis;GO:0009831 plant-type cell wall modification involved in multidimensional cell growth;GO:0010411 xyloglucan metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LC45-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LC53-1", "uniprot_id": [ { "id": "EPF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LC53", "type": "external" } ], "mass": 13317.0, "length": 120, "protein_name": "Protein EPIDERMAL PATTERNING FACTOR 2", "gene_name": "EPF2", "organism": "Arabidopsis", "refseq_name": "Putative membrane lipoprotein", "refseq_ac": [ { "id": "NP_564442", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564442", "type": "external" } ], "gene_names_uniprotkb": "EPF2; F23M19", "gene_names_refseq": "EPF2; EPIDERMAL PATTERNING FACTOR 2", "protein_names_uniprotkb": "Protein EPIDERMAL PATTERNING FACTOR 2", "protein_names_refseq": "Putative membrane lipoprotein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G34245)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;19398336;19435754;22027592;22241782;25043023;27862469", "class_list": "", "function": "Controls stomatal patterning. Regulates the number of cells that enter, and remain in, the stomatal lineage by inhibiting protodermal cells from adopting the meristemoid mother cell (MMC) fate in a non-cell-autonomous manner. Mediates stomatal development inhibition. MEPF2: mobile signal controlling stomatal development in a non-cell-autonomous manner (PubMed:22241782). Uses ERECTA as major receptor (PubMed:22241782). Inactivated by cleavage by CRSP (AC Q9LNU1) (PubMed:25043023). May act by competing with somatogen (AC Q9SV72) for the same receptor, TMM (AC Q9SSD1) (PubMed:22027592)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0010052 guard cell differentiation;GO:0010374 stomatal complex development;GO:0090626 plant epidermis morphogenesis;GO:2000122 negative regulation of stomatal complex development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LC53-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LC68-1", "uniprot_id": [ { "id": "NRP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LC68", "type": "external" } ], "mass": 29354.0, "length": 255, "protein_name": "NAP1-related protein 2", "gene_name": "NRP2", "organism": "Arabidopsis", "refseq_name": "NAP1-related protein 2", "refseq_ac": [ { "id": "NP_564063", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564063", "type": "external" } ], "gene_names_uniprotkb": "NRP2; F6A14.10; NFA5", "gene_names_refseq": "F6A14.10; F6A14_10; NAP1-related protein 2; NRP2", "protein_names_uniprotkb": "NAP1-related protein 2; Nucleosome/chromatin assembly factor group A5; Protein SET homolog 2", "protein_names_refseq": "NAP1-related protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18800)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;11910074;14593172;17122067;19704743;21768351;22534127;23572148;26091701;27862469;28011693", "class_list": "", "function": "Acts as a histone H2A/H2B chaperone in nucleosome assembly, playing a critical role for the correct expression of genes involved in root proliferation and patterning. Required with NRP1 for the maintenance of cell proliferation and differentiation in postembryonic root growth. Involved in both intramolecular and intermolecular somatic homologous recombination., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GXV1;Q9M9V0", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000785 chromatin", "go_biological_process": "GO:0006334 nucleosome assembly;GO:0000724 double-strand break repair via homologous recombination;GO:0016444 somatic cell DNA recombination", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8LC68-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LC79-1", "uniprot_id": [ { "id": "GAT18_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LC79", "type": "external" } ], "mass": 31832.0, "length": 295, "protein_name": "GATA transcription factor 18", "gene_name": "GATA18", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "GATA18; F18B3.150; HAN", "gene_names_refseq": "", "protein_names_uniprotkb": "GATA transcription factor 18; Protein HANABA TARANU", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50870)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;15084732;15367721;20643354;22669825;23335616;26390296;27862469", "class_list": "", "function": "Transcriptional factor that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (including its own promoter and GATA21 promoter), thus regulating the expression of genes mostly involved in hormone responses and floral organ specification (including genes regulating hormones responses) (PubMed:23335616, PubMed:26390296). Regulates both flower and shoot apical meristem (SAM) development, especially for establishing organ boundaries in shoots and flowers, probably by controlling the number and position of WUS-expressing cells (PubMed:15367721, PubMed:23335616). Coregulates, with AGO10/PNH, the shoot apical meristem (SAM) organization. Regulates floral organ development via the promotion of JAG and NPR5/BOP2 expression. Modulates cytokinin homeostasis in organ boundaries by regulating CKX3 expression (PubMed:26390296). Involved in cell proliferation and differentiation (PubMed:15367721). Required to position the inductive proembryo boundary via the regulation of gene expression and for early embryonic development (PubMed:20643354). Together with GIF1/AN3, mediates cotyledon identity by preventing ectopic root formation through the repression of PLT1 expression (PubMed:22669825)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SVE1;Q9SVL2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009793 embryo development ending in seed dormancy;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LC79-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LCA1-1", "uniprot_id": [ { "id": "CUT1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LCA1", "type": "external" } ], "mass": 18482.0, "length": 174, "protein_name": "Protein CURVATURE THYLAKOID 1B, chloroplastic", "gene_name": "CURT1B", "organism": "Arabidopsis", "refseq_name": "photosystem I P subunit", "refseq_ac": [ { "id": "NP_001031551", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031551", "type": "external" } ], "gene_names_uniprotkb": "CURT1B; F19D11.10; PSAP; PSI-P; TMP14", "gene_names_refseq": "CURT1B; CURVATURE THYLAKOID 1B; F19D11.10; PLASTID TRANSCRIPTIONALLY ACTIVE 8; PSAP; PSI-P; PTAC8; THYLAKOID MEMBRANE PHOSPHOPROTEIN OF 14 KDA; TMP14; photosystem I P subunit", "protein_names_uniprotkb": "Protein CURVATURE THYLAKOID 1B, chloroplastic; Photosystem I protein P; Thylakoid membrane phosphoprotein 14 kDa", "protein_names_refseq": "photosystem I P subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46820)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10617197;12883043;14593172;16109415;18813226;19245862;19376835;20466843;21768351;22060019;22223895;22329444;22616989;23111157;23328941;23660473;23839788;26091701;26187819;27862469;28011693;30833711", "class_list": "", "function": "Determines thylakoid architecture by inducing membrane curvature., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81038", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0019904 protein domain specific binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009515 granal stacked thylakoid;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0097753 membrane bending;GO:0009773 photosynthetic electron transport in photosystem I;GO:0090391 granum assembly", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q8LCA1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LCG7-1", "uniprot_id": [ { "id": "NFYC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LCG7", "type": "external" } ], "mass": 23124.0, "length": 199, "protein_name": "Nuclear transcription factor Y subunit C-2", "gene_name": "NFYC2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "NFYC2; F14G9.21; HAP5B; T6H22.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit C-2; AtNF-YC-2; Transcriptional activator HAP5B", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56170)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11250072;11867211;14593172;24728648;27862469;9662544", "class_list": "", "function": "Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23636;Q8VY66;Q9SGU4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LCG7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LCQ4-1", "uniprot_id": [ { "id": "LHCA6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LCQ4", "type": "external" } ], "mass": 29939.0, "length": 270, "protein_name": "Photosystem I chlorophyll a/b-binding protein 6, chloroplastic", "gene_name": "LHCA6", "organism": "Arabidopsis", "refseq_name": "PSI type II chlorophyll a/b-binding protein (Lhca2*1)", "refseq_ac": [ { "id": "NP_173349", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173349", "type": "external" } ], "gene_names_uniprotkb": "LHCA6; T29M8.2", "gene_names_refseq": "LHCA2*1; Lhca6; PSI TYPE II CHLOROPHYLL A/B-BINDING PROTEIN; T29M8.2; T29M8_2; photosystem I light harvesting complex gene 6", "protein_names_uniprotkb": "Photosystem I chlorophyll a/b-binding protein 6, chloroplastic; LHCI type III LHCA6", "protein_names_refseq": "PSI type II chlorophyll a/b-binding protein (Lhca2*1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G19150)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10366881;11130712;14593172;19903870;21278308;21785130;24924143;27862469;8049378", "class_list": "", "function": "The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. Seems involved in the function of the photosystem I in low light conditions, when other LHCA proteins are less abundant. Required, together with LHCA5, for the formation of a full-size NAD(P)H dehydrogenase-photosystem I supercomplex (NDH-PSI) that triggers cyclic and chlororespiratory electron transport in chloroplast thylakoids, especially under stress conditions (e.g. increased light intensity)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q43382;Q84WT1;Q9LMB1", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016168 chlorophyll binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009768 photosynthesis, light harvesting in photosystem I", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LCQ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LD98-1", "uniprot_id": [ { "id": "NHL6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LD98", "type": "external" } ], "mass": 28574.0, "length": 252, "protein_name": "NDR1/HIN1-like protein 6", "gene_name": "NHL6", "organism": "Arabidopsis", "refseq_name": "Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family", "refseq_ac": [ { "id": "NP_564862", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564862", "type": "external" } ], "gene_names_uniprotkb": "NHL6; F1E22.7", "gene_names_refseq": "F1E22.7; F1E22_7", "protein_names_uniprotkb": "NDR1/HIN1-like protein 6", "protein_names_refseq": "Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65690)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;26849212;27862469", "class_list": "", "function": "Plays an important role in the abiotic stresses-induced abscisic acid (ABA) signaling and biosynthesis. Acts as a positive regulator of ABA-mediated seed germination inhibition. Functions downstream of ABF2/AREB1, ABF4/AREB2 and ABF3., [UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHY5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006970 response to osmotic stress;GO:1902074 response to salt;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q8LD98-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDC8-1", "uniprot_id": [ { "id": "ERF92_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDC8", "type": "external" } ], "mass": 24695.0, "length": 218, "protein_name": "Ethylene-responsive transcription factor 1B", "gene_name": "ERF1B", "organism": "Arabidopsis", "refseq_name": "ethylene response factor 1", "refseq_ac": [ { "id": "NP_188965", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188965", "type": "external" } ], "gene_names_uniprotkb": "ERF1B; ERF092; ERF1; K14B15.15", "gene_names_refseq": "ATERF1; AtERF#092; ERF1B; ERF1; ETHYLENE RESPONSE FACTOR 1; ethylene response factor 1", "protein_names_uniprotkb": "Ethylene-responsive transcription factor 1B; AtERF1B; EREBP-1B; Ethylene-responsive element-binding factor 1B", "protein_names_refseq": "ethylene response factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23240)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10819329;11950980;12060224;12509529;12805630;14593172;15242170;16407444;17526916;21343311;27862469;9851977", "class_list": "", "function": "Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression during the plant development, and/or mediated by stress factors and by components of stress signal transduction pathways. Seems to be a key integrator of ethylene and jasmonate signals in the regulation of ethylene/jasmonate-dependent defenses. Can mediate resistance to necrotizing fungi (Botrytis cinerea and Plectosphaerella cucumerina) and to soil borne fungi (Fusarium oxysporum conglutinans and Fusiarium oxysporum lycopersici), but probably not to necrotizing bacteria (Pseudomonas syringae tomato)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZNR2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0006355 regulation of DNA-templated transcription;GO:0009867 jasmonic acid mediated signaling pathway;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8LDC8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDL0-1", "uniprot_id": [ { "id": "HHL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDL0", "type": "external" } ], "mass": 26081.0, "length": 231, "protein_name": "Protein HHL1, chloroplastic", "gene_name": "HHL1", "organism": "Arabidopsis", "refseq_name": "multidrug resistance protein", "refseq_ac": [ { "id": "NP_001185346", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185346", "type": "external" } ], "gene_names_uniprotkb": "HHL1; F12A21.30", "gene_names_refseq": "F12A21.32; HHL1; HYPERSENSITIVE TO HIGH LIGHT 1", "protein_names_uniprotkb": "Protein HHL1, chloroplastic; Hypersensitive to high light 1", "protein_names_refseq": "multidrug resistance protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67700)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19423640;24632535;25561503;27862469", "class_list": "", "function": "Involved in photoprotection. Forms a complex with LQY1 that is involved in the repair and reassembly cycle of the PSII-LHCII supercomplex under high-light conditions. May function in guiding the release of psbC from PSII core monomers., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HTQ4;Q94A67", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009941 chloroplast envelope", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LDL0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDQ4-1", "uniprot_id": [ { "id": "TAP46_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDQ4", "type": "external" } ], "mass": 45663.0, "length": 405, "protein_name": "PP2A regulatory subunit TAP46", "gene_name": "TAP46", "organism": "Arabidopsis", "refseq_name": "2A phosphatase associated protein of 46 kD", "refseq_ac": [ { "id": "NP_568783", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568783", "type": "external" } ], "gene_names_uniprotkb": "TAP46; MNB8.6", "gene_names_refseq": "2A phosphatase associated protein of 46 kD; MNB8.6; MNB8_6; TAP46", "protein_names_uniprotkb": "PP2A regulatory subunit TAP46; 2A phosphatase-associated protein of 46 kDa", "protein_names_refseq": "2A phosphatase associated protein of 46 kD", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G53000)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10517853;10718197;14593172;21216945;21597327;24357600;24810976;25399018;27862469", "class_list": "", "function": "Involved in the positive regulation of the TOR signaling pathway (PubMed:21216945, PubMed:25399018). Acts as a negative regulator of PP2A catalytic activity (PubMed:10517853, PubMed:21216945, PubMed:24357600). Plays a positive role in the ABA-regulated inhibition of germination, probably throught its interaction with ABI5 (PubMed:24357600)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LVV2;Q9XHD0", "ec_number_list": [], "go_molecular_function": "GO:0019900 kinase binding;GO:0051721 protein phosphatase 2A binding;GO:0019903 protein phosphatase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0035303 regulation of dephosphorylation;GO:0009409 response to cold;GO:0030307 positive regulation of cell growth;GO:0032008 positive regulation of TOR signaling;GO:0031929 TOR signaling", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LDQ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDS2-1", "uniprot_id": [ { "id": "XTH27_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDS2", "type": "external" } ], "mass": 38415.0, "length": 333, "protein_name": "Probable xyloglucan endotransglucosylase/hydrolase protein 27", "gene_name": "XTH27", "organism": "Arabidopsis", "refseq_name": "endoxyloglucan transferase A3", "refseq_ac": [ { "id": "NP_178294", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178294", "type": "external" } ], "gene_names_uniprotkb": "XTH27; EXGT-A3; T23K3.4", "gene_names_refseq": "ATXTH27; EXGT-A3; T23K3.4; T23K3_4; XTH27; XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 27; endoxyloglucan transferase A3", "protein_names_uniprotkb": "Probable xyloglucan endotransglucosylase/hydrolase protein 27; 2.4.1.207; At-XTH27; XTH-27", "protein_names_refseq": "endoxyloglucan transferase A3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G01850)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10557219;10617197;12514239;14593172;15860011;19423640;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity). Required for cell wall modification during the development of tracheary elements., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B9DI46;O04906;Q9SEB1", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762 xyloglucan:xyloglucosyl transferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0042546 cell wall biogenesis;GO:0010087 phloem or xylem histogenesis;GO:0071555 cell wall organization;GO:0010411 xyloglucan metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LDS2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDU4-1", "uniprot_id": [ { "id": "RCCR_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDU4", "type": "external" } ], "mass": 36449.0, "length": 319, "protein_name": "Red chlorophyll catabolite reductase, chloroplastic", "gene_name": "RCCR", "organism": "Arabidopsis", "refseq_name": "accelerated cell death 2 (ACD2)", "refseq_ac": [ { "id": "NP_195417", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195417", "type": "external" } ], "gene_names_uniprotkb": "RCCR; ACD2; C7A10_360", "gene_names_refseq": "ACCELERATED CELL DEATH 2; ACD2; AP22.36; AP22_36; ARABIDOPSIS THALIANA RED CHLOROPHYLL CATABOLITE REDUCTASE; ATRCCR; RCCR; RED CHLOROPHYLL CATABOLITE REDUCTASE", "protein_names_uniprotkb": "Red chlorophyll catabolite reductase, chloroplastic; 1.3.7.12; Accelerated cell death protein 2; AtRCCR; RCC reductase", "protein_names_refseq": "accelerated cell death 2 (ACD2)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37000)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;10743659;11149948;14593172;19374909;20727901;22366162;23200839;27862469;9461215", "class_list": "", "function": "Catalyzes the key reaction of chlorophyll catabolism, porphyrin macrocycle cleavage of pheophorbide a (pheide a) to a primary fluorescent catabolite (pFCC). Works in a two-step reaction with pheophorbide a oxygenase (PaO) by reducing the C20/C1 double bond of the intermediate, RCC. Belongs to the chlorophyll catabolic enzymes (CCEs)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23185", "ec_number_list": [ { "id": "1.3.7.12", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.7.12", "type": "external" } ], "go_molecular_function": "GO:0051743 red chlorophyll catabolite reductase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane", "go_biological_process": "GO:0098542 defense response to other organism;GO:0043067 regulation of programmed cell death;GO:0015996 chlorophyll catabolic process;GO:0010363 regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8LDU4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDW6-1", "uniprot_id": [ { "id": "ENDO3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDW6", "type": "external" } ], "mass": 33424.0, "length": 294, "protein_name": "Endonuclease 3", "gene_name": "ENDO3", "organism": "Arabidopsis", "refseq_name": "endonuclease 3", "refseq_ac": [ { "id": "NP_001078420", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078420", "type": "external" } ], "gene_names_uniprotkb": "ENDO3; F17L22.50; F18E5.210", "gene_names_refseq": "ENDO3; F17L22.50; endonuclease 3", "protein_names_uniprotkb": "Endonuclease 3; 3.1.30.1; AtENDO3; Deoxyribonuclease ENDO3; Single-stranded-nucleate endonuclease ENDO3", "protein_names_refseq": "endonuclease 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21590)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;17651368;23620482;27862469", "class_list": "", "function": "Endonuclease that can use RNA and single-stranded DNA as substrates (PubMed:23620482). In contradiction with PubMed:23620482, cannot hydrolyze single-stranded DNA and does not cleave mismatches (PubMed:17651368)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O65424", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003676 nucleic acid binding;GO:0004519 endonuclease activity;GO:0004521 RNA endonuclease activity;GO:0000014 single-stranded DNA endodeoxyribonuclease activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006308 DNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8LDW6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LE52-1", "uniprot_id": [ { "id": "DHAR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LE52", "type": "external" } ], "mass": 28514.0, "length": 258, "protein_name": "Glutathione S-transferase DHAR3, chloroplastic", "gene_name": "DHAR3", "organism": "Arabidopsis", "refseq_name": "dehydroascorbate reductase 1", "refseq_ac": [ { "id": "NP_568336", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568336", "type": "external" } ], "gene_names_uniprotkb": "DHAR3; F5E19.50", "gene_names_refseq": "DHAR3; F5E19.50; F5E19_50; dehydroascorbate reductase 1", "protein_names_uniprotkb": "Glutathione S-transferase DHAR3, chloroplastic; 1.8.5.1; 2.5.1.18; AtDHAR3; CLIC homolog 3; ChlDHAR; Chloride intracellular channel homolog 3; GSH-dependent dehydroascorbate reductase 3; Glutathione-dependent dehydroascorbate reductase 3", "protein_names_refseq": "dehydroascorbate reductase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16710)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;11148269;11910074;12077129;14593172;15352244;18431481;19174456;23572148;27862469", "class_list": "", "function": "Displays a dual function. As a soluble protein, exhibits glutathione-dependent thiol transferase and dehydroascorbate (DHA) reductase activities (PubMed:12077129). Key component of the ascorbate recycling system. Involved in the redox homeostasis, especially in scavenging of ROS under oxidative stresses (By similarity)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q67XJ9;Q680W2;Q8VZA3;Q9FE30;Q9LFE6", "ec_number_list": [ { "id": "2.5.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.18", "type": "external" }, { "id": "1.8.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.5.1", "type": "external" }, { "id": "5.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.-", "type": "external" } ], "go_molecular_function": "GO:0004364 glutathione transferase activity;GO:0045174 glutathione dehydrogenase (ascorbate) activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0019852 L-ascorbic acid metabolic process;GO:0010731 protein glutathionylation;GO:0140547 acquisition of seed longevity;GO:0033355 ascorbate glutathione cycle", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8LE52-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LE58-1", "uniprot_id": [ { "id": "CHM1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LE58", "type": "external" } ], "mass": 22763.0, "length": 203, "protein_name": "ESCRT-related protein CHMP1A", "gene_name": "CHMP1A", "organism": "Arabidopsis", "refseq_name": "vacuolar protein sorting 46.1", "refseq_ac": [ { "id": "NP_173215", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173215", "type": "external" } ], "gene_names_uniprotkb": "CHMP1A; F11A6.7; VPS46.1", "gene_names_refseq": "CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1B; CHMP1B; F11A6.7; F11A6_7; VPS46.1; vacuolar protein sorting 46.1", "protein_names_uniprotkb": "ESCRT-related protein CHMP1A; Protein CHARGED MULTIVESICULAR BODY PROTEIN 1A; Protein CHROMATIN MODIFYING PROTEIN 1A; Vacuolar protein-sorting-associated protein 46.1", "protein_names_refseq": "vacuolar protein sorting 46.1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17730)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11910074;19304934;20663085;22010978;22060019;25649438;27862469", "class_list": "", "function": "Involved in ESCRT-dependent multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Mediates the MVB sorting of the auxin carriers PIN1, PIN2 and AUX1. Required for embryonic axis establishment and seedling growth (PubMed:19304934). Required for autophagic degradation of plastid proteins. Promotes the efficient sequestration of cargo from plastids into autophagosomes. Mediates the efficient delivery of autophagic plastid bodies to the vacuole, but not into the cytoplasm (PubMed:25649438)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZ60", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000815 ESCRT III complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005771 multivesicular body", "go_biological_process": "GO:0000578 embryonic axis specification;GO:0015031 protein transport;GO:0006914 autophagy;GO:0045324 late endosome to vacuole transport;GO:0032509 endosome transport via multivesicular body sorting pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LE58-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LE98-1", "uniprot_id": [ { "id": "ICR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LE98", "type": "external" } ], "mass": 38358.0, "length": 344, "protein_name": "Interactor of constitutive active ROPs 1", "gene_name": "ICR1", "organism": "Arabidopsis", "refseq_name": "interactor of constitutive active rops 1", "refseq_ac": [ { "id": "NP_564015", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564015", "type": "external" } ], "gene_names_uniprotkb": "ICR1; F20D23.32; F20D23_31; RIP1", "gene_names_refseq": "F20D23.32; ICR1; RIP1; ROP INTERACTIVE PARTNER 1; interactor of constitutive active rops 1", "protein_names_uniprotkb": "Interactor of constitutive active ROPs 1; ROP-interactive partner 1", "protein_names_refseq": "interactor of constitutive active rops 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17140)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;17493810;19825600;20098722;20832900;23111157;23660473;25561503;27862469", "class_list": "", "function": "Acts as a scaffold, mediating interaction of ROPs with different proteins. Required for primary and adventitious root maintenance, but not for their formation. Promotes the stabilization of ARAC11 on the plasma membrane of the pollen tube initiation site but not the activation of ARAC11. Regulates directionality of polar auxin transport, and is required for the formation of a stable auxin maximum and tip localized auxin gradient during embryogenesis, organogenesis, and meristem activity. Involved in exocytosis and in the recycling of PIN proteins back to the plasma membrane., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WP02;Q29Q29", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0090404 pollen tube tip", "go_biological_process": "GO:2000012 regulation of auxin polar transport", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LE98-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LEG1-1", "uniprot_id": [ { "id": "RSL4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LEG1", "type": "external" } ], "mass": 29160.0, "length": 258, "protein_name": "Transcription factor RSL3", "gene_name": "RSL4", "organism": "Arabidopsis", "refseq_name": "root hair defective 6-like 4", "refseq_ac": [ { "id": "NP_564293", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564293", "type": "external" } ], "gene_names_uniprotkb": "RSL4; BHLH54; EN114; T22C5.19", "gene_names_refseq": "RSL4; T22C5.19; T22C5_19; root hair defective 6-like 4", "protein_names_uniprotkb": "Transcription factor RSL3; AtbHLH54; Basic helix-loop-helix protein 54; Protein RHD SIX-LIKE 4; ROOT HAIR DEFECTIVE 6-LIKE 4; Transcription factor EN 114; Transcription factor bHLH54; bHLH 54; bHLH transcription factor bHLH054", "protein_names_refseq": "root hair defective 6-like 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27740)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;12679534;12897250;14600211;20139979;27251390;27452638;27862469;29651114;31988260", "class_list": "", "function": "Transcription factor involved in the regulation of root hair elongation (PubMed:20139979, PubMed:27251390, PubMed:27452638). Is sufficient to promote postmitotic cell growth in root-hair cells and is a direct transcriptional target of RHD6 and RSL1 (PubMed:20139979). Involved in the regulation of root hair elongation in response to low phosphate (PubMed:27251390, PubMed:29651114). Controls root hair cell growth by regulating the expression of genes encoding proteins involved in cell signaling, cell wall modification and secretion (PubMed:27452638)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178WM21;C0SUX8;Q9SFY5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8LEG1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LEG3-1", "uniprot_id": [ { "id": "MA652_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LEG3", "type": "external" } ], "mass": 65205.0, "length": 578, "protein_name": "65-kDa microtubule-associated protein 2", "gene_name": "MAP65-2", "organism": "Arabidopsis", "refseq_name": "microtubule-associated protein 65-2", "refseq_ac": [ { "id": "NP_567756", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567756", "type": "external" } ], "gene_names_uniprotkb": "MAP65-2; F10M23.100", "gene_names_refseq": "F10M23.100; F10M23_100; MAP65-2; microtubule-associated protein 65-2", "protein_names_uniprotkb": "65-kDa microtubule-associated protein 2; AtMAP65-2", "protein_names_refseq": "microtubule-associated protein 65-2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26760)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;12516862;15469496;19002591;23111157;23572148;25561503;27862469;28011693", "class_list": "", "function": "Microtubule-associated protein that stabilize microtubules (MT). Involved in the regulation of MT organization and dynamics. Confers MT resistance to the drug propyzamide and cold conditions., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZ16", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0000922 spindle pole;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle", "go_biological_process": "GO:0051301 cell division;GO:0000226 microtubule cytoskeleton organization;GO:0000911 cytokinesis by cell plate formation;GO:0048528 post-embryonic root development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LEG3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LES0-1", "uniprot_id": [ { "id": "ROCK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LES0", "type": "external" } ], "mass": 34836.0, "length": 325, "protein_name": "UDP-N-acetylglucosamine transporter ROCK1", "gene_name": "ROCK1", "organism": "Arabidopsis", "refseq_name": "Nucleotide-sugar transporter family protein", "refseq_ac": [ { "id": "NP_569004", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_569004", "type": "external" } ], "gene_names_uniprotkb": "ROCK1; MXK3.23", "gene_names_refseq": "MXK3.23; MXK3_23", "protein_names_uniprotkb": "UDP-N-acetylglucosamine transporter ROCK1; CMP-SA-Tr 5; CMP-Sia-Tr 5; CMP-sialic acid transporter 5; Protein REPRESSOR OF CYTOKININ DEFICIENCY 1", "protein_names_refseq": "Nucleotide-sugar transporter family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65000)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;14593172;15456736;25053812;25535363;27862469", "class_list": "", "function": "Mediates the transport of UDP-linked acetylated hexosamines across the endoplasmic reticulum (ER) membrane (PubMed:25535363). Facilitates UDP-N-acetylglucosamine (UDP-GlcNAc) and UDP-N-acetylgalactosamine (UDP-GalNAc) transport (PubMed:25535363). Regulates the cytokinin signal in meristematic cells through modulating activity of cytokinin oxidases/dehydrogenases (PubMed:25535363). Part of the ER quality control system, which determines the fate of aberrant proteins in the secretory pathway (PubMed:25535363)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0JQ95;Q8VYH1;Q9LV78", "ec_number_list": [], "go_molecular_function": "GO:0015136 sialic acid transmembrane transporter activity;GO:0005463 UDP-N-acetylgalactosamine transmembrane transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0015739 sialic acid transport;GO:1904293 negative regulation of ERAD pathway;GO:1990569 UDP-N-acetylglucosamine transmembrane transport;GO:0015789 UDP-N-acetylgalactosamine transmembrane transport;GO:0010584 pollen exine formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LES0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LEU3-1", "uniprot_id": [ { "id": "NOL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LEU3", "type": "external" } ], "mass": 38149.0, "length": 348, "protein_name": "Chlorophyll(ide) b reductase NOL, chloroplastic", "gene_name": "NOL", "organism": "Arabidopsis", "refseq_name": "NYC1-like protein", "refseq_ac": [ { "id": "NP_568145", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568145", "type": "external" } ], "gene_names_uniprotkb": "NOL; MUG13.25", "gene_names_refseq": "MUG13.25; MUG13_25; NOL; NYC1-like", "protein_names_uniprotkb": "Chlorophyll(ide) b reductase NOL, chloroplastic; 1.1.1.294; AtNOL; Protein NON-YELLOW COLORING 1-LIKE; Protein NYC1-LIKE; Short-chain dehydrogenase/reductase NOL", "protein_names_refseq": "NYC1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04900)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "17416733;19403948;22366162;23200839;27862469;9330910", "class_list": "", "function": "Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates. Belongs to the chlorophyll catabolic enzymes (CCEs)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FF83", "ec_number_list": [ { "id": "1.1.1.294", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.294", "type": "external" } ], "go_molecular_function": "GO:0034256 chlorophyll(ide) b reductase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0015996 chlorophyll catabolic process;GO:0010304 PSII associated light-harvesting complex II catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LEU3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LF21-1", "uniprot_id": [ { "id": "DRP1C_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LF21", "type": "external" } ], "mass": 68723.0, "length": 614, "protein_name": "Phragmoplastin DRP1C", "gene_name": "DRP1C", "organism": "Arabidopsis", "refseq_name": "DYNAMIN-like 1C", "refseq_ac": [ { "id": "NP_172936", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172936", "type": "external" } ], "gene_names_uniprotkb": "DRP1C; ADL1C; ADL5; DLP1; F10B6.23", "gene_names_refseq": "ADL1C; ADL5; ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5; DL1C; DRP1C; DYNAMIN RELATED PROTEIN 1C; DYNAMIN-LIKE PROTEIN 5; DYNAMIN-like 1C; F10B6.23; F10B6_23", "protein_names_uniprotkb": "Phragmoplastin DRP1C; 3.6.5.-; AtDRP1C; Dynamin-like protein 1C; Dynamin-like protein 5; Dynamin-like protein DLP1; Dynamin-related protein 1C", "protein_names_refseq": "DYNAMIN-like 1C", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14830)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11351070;12834397;14593172;14750516;14750520;17272265;18344418;18621982;27862469", "class_list": "", "function": "Microtubule-associated force-producing protein that is targeted to the growing edges of the cell plate during cytokinesis. Also plays a major role in plasma membrane maintenance during pollen maturation (PubMed:18344418). Has a GTPase activity (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8S3C8;Q9FNX6;Q9LQU8;Q9SE81", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005886 plasma membrane;GO:0005938 cell cortex", "go_biological_process": "GO:0051301 cell division;GO:0007005 mitochondrion organization;GO:0000266 mitochondrial fission;GO:0010152 pollen maturation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8LF21-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LF36-1", "uniprot_id": [ { "id": "2A5T_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LF36", "type": "external" } ], "mass": 56510.0, "length": 492, "protein_name": "Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform", "gene_name": "B'THETA", "organism": "Arabidopsis", "refseq_name": "Protein phosphatase 2A regulatory B subunit family protein", "refseq_ac": [ { "id": "NP_172803", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172803", "type": "external" } ], "gene_names_uniprotkb": "B'THETA; T6J4.19", "gene_names_refseq": "T6J4.19; T6J4_19", "protein_names_uniprotkb": "Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform; AtB' theta; PP2A, B' subunit, theta isoform", "protein_names_refseq": "Protein phosphatase 2A regulatory B subunit family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G13460)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;12068121;19672620;21258370;25489022;26517938;27862469", "class_list": "", "function": "The B regulatory subunit may modulate substrate selectivity and catalytic activity, and may also direct the localization of the catalytic enzyme to a particular subcellular compartment (By similarity). Associates with the serine/threonine-protein phosphatase PP2A catalytic subunit C and regulatory subunit A to positively regulates beta-oxidation of fatty acids and protoauxins in peroxisomes by dephosphorylating peroxisomal beta-oxidation-related proteins (PubMed:25489022). Required for the formation of the PP2A holoenzyme that negatively regulates brassinosteroid signaling by dephosphorylating and inactivating BRI1 in the cytoplasm (PubMed:26517938)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0V836;Q9FX52", "ec_number_list": [], "go_molecular_function": "GO:0072542 protein phosphatase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0000159 protein phosphatase type 2A complex", "go_biological_process": "GO:0032000 positive regulation of fatty acid beta-oxidation;GO:0051177 meiotic sister chromatid cohesion;GO:0009742 brassinosteroid mediated signaling pathway;GO:1900458 negative regulation of brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LF36-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LFH5-1", "uniprot_id": [ { "id": "SWET8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LFH5", "type": "external" } ], "mass": 26886.0, "length": 239, "protein_name": "Bidirectional sugar transporter SWEET8", "gene_name": "SWEET8", "organism": "Arabidopsis", "refseq_name": "Nodulin MtN3 family protein", "refseq_ac": [ { "id": "NP_001031986", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031986", "type": "external" } ], "gene_names_uniprotkb": "SWEET8; MSN9.17; MSN9_160; RPG1", "gene_names_refseq": "AtSWEET8; MSN9.17; MSN9_17; RPG1; RUPTURED POLLEN GRAIN1; SWEET8", "protein_names_uniprotkb": "Bidirectional sugar transporter SWEET8; AtSWEET8; Protein RUPTURED POLLEN GRAIN 1; Protein SUGARS WILL EVENTUALLY BE EXPORTED TRANSPORTERS 8", "protein_names_refseq": "Nodulin MtN3 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40260)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11910074;14593172;16299181;18434608;21107422;24027245;25988582;27862469;9679202", "class_list": "", "function": "Mediates both low-affinity uptake and efflux of sugar across the plasma membrane. Required, in pollen, for microspore cell integrity and primexine pattern formation (PubMed:18434608, PubMed:25988582)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2V2R4;Q9FL06", "ec_number_list": [], "go_molecular_function": "GO:0051119 sugar transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0008643 carbohydrate transport;GO:0009555 pollen development;GO:0010208 pollen wall assembly;GO:0010584 pollen exine formation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LFH5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LFN2-1", "uniprot_id": [ { "id": "Y3037_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LFN2", "type": "external" } ], "mass": 88187.0, "length": 802, "protein_name": "Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770", "gene_name": "F20H23.20", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F20H23.20", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G03770)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;18273534;20064227;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "B0FUP8;Q8GUM9;Q9SRV4", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LFN2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LFS6-1", "uniprot_id": [ { "id": "BRN1L_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LFS6", "type": "external" } ], "mass": 48199.0, "length": 441, "protein_name": "RNA-binding protein BRN1", "gene_name": "BRN1", "organism": "Arabidopsis", "refseq_name": "RNA-binding protein-defense related 1", "refseq_ac": [ { "id": "NP_001329301", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329301", "type": "external" } ], "gene_names_uniprotkb": "BRN1; F4C21.3; RBP-DR1; T4I9.1", "gene_names_refseq": "AtBRN1; AtRBP-DR1; BRN1; Bruno-like 1; F4C21.3; RBP-DR1; RNA-binding protein-defense related 1", "protein_names_uniprotkb": "RNA-binding protein BRN1; AtBRN1; AtRBP-DR1; Protein BRUNO-LIKE 1; Protein RNA-BINDING PROTEIN-DEFENSE RELATED 1", "protein_names_refseq": "RNA-binding protein-defense related 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G03110)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12432076;14593172;19423640;20636102;23437850;27862469", "class_list": "", "function": "RNA-binding protein involved in the regulation of flowering time. Acts as a repressor of the activity of SOC1, a transcriptional activator of flowering time. Binds to the 3'-UTR of SOC1 mRNA in the cytoplasm and participates in SOC1 mRNA decay, mediated by the distal region of the SOC1 3'-UTR (PubMed:23437850). Acts as a positive regulator of salicylic acid (SA)-mediated immunity. May act on SA signaling-related genes at a post-transcriptional level (PubMed:20636102)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZ45;Q9ZNS7", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006402 mRNA catabolic process;GO:2000028 regulation of photoperiodism, flowering;GO:0009626 plant-type hypersensitive response;GO:0009908 flower development;GO:0080151 positive regulation of salicylic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LFS6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LFV3-1", "uniprot_id": [ { "id": "CDF3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LFV3", "type": "external" } ], "mass": 49730.0, "length": 448, "protein_name": "Cyclic dof factor 3", "gene_name": "CDF3", "organism": "Arabidopsis", "refseq_name": "cycling DOF factor 3", "refseq_ac": [ { "id": "NP_190334", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190334", "type": "external" } ], "gene_names_uniprotkb": "CDF3; DOF3.3; F1P2.50; HPPBF-2A", "gene_names_refseq": "CDF3; cycling DOF factor 3", "protein_names_uniprotkb": "Cyclic dof factor 3; AtDOF3.3; Dof zinc finger protein DOF3.3; H-protein promoter-binding factor 2a", "protein_names_refseq": "cycling DOF factor 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G47500)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;12475498;14593172;16002617;19619493;25561503;27862469", "class_list": "", "function": "Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81600", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LFV3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LG89-1", "uniprot_id": [ { "id": "BABL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LG89", "type": "external" } ], "mass": 14038.0, "length": 129, "protein_name": "Basic blue protein", "gene_name": "ARPN", "organism": "Arabidopsis", "refseq_name": "plantacyanin", "refseq_ac": [ { "id": "NP_178388", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178388", "type": "external" } ], "gene_names_uniprotkb": "ARPN; T17M13.2", "gene_names_refseq": "ARPN; T17M13.2; T17M13_2; plantacyanin", "protein_names_uniprotkb": "Basic blue protein; Plantacyanin", "protein_names_refseq": "plantacyanin", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02850)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;15908590;18408011;22174881;27862469;9761472", "class_list": "", "function": "Forms a concentration gradient along the pollen tube growth path, with a lower level in the stigma papilla cell wall and a higher level in the transmitting tract extracellular matrix of the style., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64499;Q8S8T5", "ec_number_list": [], "go_molecular_function": "GO:0009055 electron transfer activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0031012 extracellular matrix;GO:0048046 apoplast", "go_biological_process": "GO:0048653 anther development;GO:0009856 pollination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LG89-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LG98-1", "uniprot_id": [ { "id": "OTU1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LG98", "type": "external" } ], "mass": 34434.0, "length": 306, "protein_name": "OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1", "gene_name": "OTU1", "organism": "Arabidopsis", "refseq_name": "ubiquitin thioesterase otubain-like protein", "refseq_ac": [ { "id": "NP_564299", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564299", "type": "external" } ], "gene_names_uniprotkb": "OTU1; F13K9.21", "gene_names_refseq": "F13K9.21; F13K9_21", "protein_names_uniprotkb": "OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1; 3.4.19.12; Deubiquitinating enzyme OTU1; OTU domain-containing protein 1", "protein_names_refseq": "ubiquitin thioesterase otubain-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28120)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;24659992;27862469", "class_list": "", "function": "Hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation (PubMed:24659992). Cysteine protease with a preference for Met-1 and 'Lys-48' over 'Lys-63'-linked ubiquitin (UB) tetramers (e.g. Ub2, Ub3 and Ub4) as substrates (PubMed:24659992)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "K9M9G0;Q9C7E1", "ec_number_list": [], "go_molecular_function": "GO:0043130 ubiquitin binding;GO:0004843 cysteine-type deubiquitinase activity;GO:1990380 K48-linked deubiquitinase activity;GO:0061815 Met1-linked polyubiquitin deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006508 proteolysis;GO:0071108 protein K48-linked deubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8LG98-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGA5-1", "uniprot_id": [ { "id": "ATL31_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGA5", "type": "external" } ], "mass": 40291.0, "length": 368, "protein_name": "E3 ubiquitin-protein ligase ATL31", "gene_name": "ATL31", "organism": "Arabidopsis", "refseq_name": "carbon/nitrogen insensitive 1", "refseq_ac": [ { "id": "NP_198094", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198094", "type": "external" } ], "gene_names_uniprotkb": "ATL31; CNI1; F21A20.130; SSV1", "gene_names_refseq": "ATL31; Arabidopsis toxicos en levadura 31; CNI1; F21A20.130; F21A20_130; carbon/nitrogen insensitive 1", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase ATL31; 2.3.2.27; Protein CARBON/NITROGEN INSENSITIVE 1; Protein SUPER SURVIVAL 1; RING-H2 finger protein ATL31; RING-type E3 ubiquitin transferase ATL31", "protein_names_refseq": "carbon/nitrogen insensitive 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G27420)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130714;11983057;16557337;17722694;19253305;19702666;23111157;23572148;24722992;25561503;27419465;27862469;28011693;30833711", "class_list": "", "function": "E3 ubiquitin-protein ligase that is required for the plant C/N response during seedling growth transition. May be involved in the early steps of the plant defense signaling pathway., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUY7", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0098542 defense response to other organism;GO:0071456 cellular response to hypoxia;GO:0016567 protein ubiquitination;GO:0042742 defense response to bacterium;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8LGA5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGB6-1", "uniprot_id": [ { "id": "ZED1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGB6", "type": "external" } ], "mass": 37957.0, "length": 334, "protein_name": "Non-functional pseudokinase ZED1", "gene_name": "ZED1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001030878", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030878", "type": "external" } ], "gene_names_uniprotkb": "ZED1; CLS; ZRK5", "gene_names_refseq": "ZED1; hopZ-ETI-deficient 1", "protein_names_uniprotkb": "Non-functional pseudokinase ZED1; AtZED1; Non-functional pseudokinase ZRK5; Protein CLUSTERED SILIQUE; Protein HOPZ-ETI-DEFICIENT 1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57750)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;24170858;26355215;27862469;28499073;28652264;30947022", "class_list": "", "function": "Together with RPP13L4/ZAR1, involved in the ambient temperature (above 22 degrees Celsius)-sensitive aerial organ development (PubMed:28499073). Together with RPP13L4/ZAR1, involved in the regulation of the ambient temperature-sensitive intersection of growth and immune response in the absence of pathogens, by repressing the transcription of SNC1 (PubMed:28499073). Probable non-functional kinase required for recognition of the Pseudomonas syringae type III effector HopZ1a by RPP13L4/ZAR1 and, together with SZE1 and SZE2, to trigger subsequent defense responses (PubMed:24170858, PubMed:26355215, PubMed:28652264, PubMed:30947022). May function as a decoy to trap HopZ1a in the ZAR1 complex for recognition by the plant immune system (PubMed:24170858)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVY9", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006952 defense response;GO:0007166 cell surface receptor signaling pathway;GO:0040008 regulation of growth;GO:0050829 defense response to Gram-negative bacterium;GO:0050776 regulation of immune response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LGB6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGE3-1", "uniprot_id": [ { "id": "ARP6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGE3", "type": "external" } ], "mass": 46944.0, "length": 421, "protein_name": "Actin-related protein 6", "gene_name": "ARP6", "organism": "Arabidopsis", "refseq_name": "actin-related protein 6", "refseq_ac": [ { "id": "NP_566861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566861", "type": "external" } ], "gene_names_uniprotkb": "ARP6; ESD1; SUF3; T4P3.8", "gene_names_refseq": "ARP6; ATARP6; EARLY IN SHORT DAYS 1; ESD1; SUF3; SUPPRESSOR OF FRI 3; actin-related protein 6", "protein_names_uniprotkb": "Actin-related protein 6; Protein EARLY IN SHORT DAYS 1; Protein SUPPRESSOR OF FRIGIDA 3", "protein_names_refseq": "actin-related protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G33520)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;11891255;12566397;14593172;15063870;16141450;16155178;16495307;17142478;17220196;17470967;17988222;26091701;27862469", "class_list": "", "function": "Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant H2A.F/Z leading to transcriptional regulation of selected genes (e.g. FLC) by chromatin remodeling. Binds to the promoter region of FLC chromatin. Required for the activation of FLC and FLC/MAF genes expression to levels that inhibit flowering, through both histone H3 and H4 acetylation and methylation mechanisms. Involved in several developmental processes including organization of plant organs, leaves formation, flowering time repression, and fertility. Modulates photoperiod-dependent epidermal leaves cell development; promotes cell division in long days, and cell expansion/division in short days. May be involved in the regulation of pathogenesis-related proteins (PRs)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GZL0;Q8GZL1;Q8GZL2;Q8GZL3;Q8GZL4;Q8GZL5;Q8GZL6;Q8GZL7;Q8GZL8;Q8GZL9;Q8GZM0;Q8GZM1;Q8GZM2;Q8GZM3;Q8GZM4;Q8LKR0;Q949Z7;Q9SRK2", "ec_number_list": [], "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton;GO:0031491 nucleosome binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000812 Swr1 complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006952 defense response;GO:0006970 response to osmotic stress;GO:0051301 cell division;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8LGE3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGF7-1", "uniprot_id": [ { "id": "PEX4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGF7", "type": "external" } ], "mass": 17708.0, "length": 157, "protein_name": "Ubiquitin-conjugating enzyme E2 PEX4", "gene_name": "PEX4", "organism": "Arabidopsis", "refseq_name": "peroxin4", "refseq_ac": [ { "id": "NP_001031939", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031939", "type": "external" } ], "gene_names_uniprotkb": "PEX4; APEM7; F18A17.10; UBC21", "gene_names_refseq": "F18A17.10; F18A17_10; PEX4; UBC21; peroxin4; ubiquitin-conjugating enzyme 21", "protein_names_uniprotkb": "Ubiquitin-conjugating enzyme E2 PEX4; 2.3.2.23; Aberrant peroxisome morphology 7; AtPEX4; E2 ubiquitin-conjugating enzyme 21; Protein PEROXIN-4; Ubiquitin carrier protein 21", "protein_names_refseq": "peroxin4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25760)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;16272432;16339806;17478547;19246395;27862469;35300425;35595097", "class_list": "", "function": "E2 ubiquitin-conjugating enzyme involved in the ubiquitination of proteins associated with the peroxisomal membrane (PubMed:35300425, PubMed:35595097). Involved in the monoubiquitination of the peroxisomal targeting signal receptor PEX5, targeting it for recycling to the cytosol (PubMed:17478547, PubMed:35595097). Necessary for the developmental elimination of obsolete peroxisome matrix proteins (PubMed:19246395)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0004842 ubiquitin-protein transferase activity;GO:0061631 ubiquitin conjugating enzyme activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005778 peroxisomal membrane", "go_biological_process": "GO:0006635 fatty acid beta-oxidation;GO:0007031 peroxisome organization;GO:0016567 protein ubiquitination;GO:0000209 protein polyubiquitination;GO:0016558 protein import into peroxisome matrix", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LGF7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGH4-1", "uniprot_id": [ { "id": "CUL4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGH4", "type": "external" } ], "mass": 91471.0, "length": 792, "protein_name": "Cullin-4", "gene_name": "CUL4", "organism": "Arabidopsis", "refseq_name": "cullin4", "refseq_ac": [ { "id": "NP_568658", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568658", "type": "external" } ], "gene_names_uniprotkb": "CUL4; MDE13.3", "gene_names_refseq": "ATCUL4; CUL4; MDE13.3; MDE13_3; cullin4", "protein_names_uniprotkb": "Cullin-4; AtCUL4", "protein_names_refseq": "cullin4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46210)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "14593172;16792691;16844902;18223036;18552200;19245862;20061554;20525848;23776212;25561503;27862469;30833711", "class_list": "", "function": "Component of the CUL4-RBX1-CDD (COP10-DDB1a-DET1) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Participates in the CDD complex to light-mediated control of development. May repress photomorphogenesis through enhancing COP1 E3 ubiquitin-protein ligase activity. Acts together with the CUL4-DDB1-COP1-SPA E3 ubiquitin-protein ligase complexes in the repression of photomorphogenesis and flowering time. Component ot the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protein ligase complex which mediates ubiquitination and subsequent degradation of AKIN10. Component of the CUL4-RBX1-DDB1-DWA1/DWA2 E3 ubiquitin-protein ligase complex that acts as a negative regulator in abscisic acid (ABA) signaling and may target ABI5 for degradation., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q84LL5;Q8RWT9;Q9FGP0", "ec_number_list": [], "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0160072 ubiquitin ligase complex scaffold activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000151 ubiquitin ligase complex;GO:0031461 cullin-RING ubiquitin ligase complex;GO:0080008 Cul4-RING E3 ubiquitin ligase complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006281 DNA repair;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0009755 hormone-mediated signaling pathway;GO:0016567 protein ubiquitination;GO:0000209 protein polyubiquitination", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8LGH4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGI3-1", "uniprot_id": [ { "id": "ARC2A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGI3", "type": "external" } ], "mass": 36041.0, "length": 318, "protein_name": "Actin-related protein 2/3 complex subunit 2A", "gene_name": "ARPC2A", "organism": "Arabidopsis", "refseq_name": "Arp2/3 complex, 34 kD subunit p34-Arc", "refseq_ac": [ { "id": "NP_564364", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564364", "type": "external" } ], "gene_names_uniprotkb": "ARPC2A; DIS2; T17H7.13", "gene_names_refseq": "ACTIN-RELATED PROTEIN C2A; ARPC2A; DIS2; DISTORTED TRICHOMES 2", "protein_names_uniprotkb": "Actin-related protein 2/3 complex subunit 2A; Actin-related protein C2A; Arp2/3 complex 34 kDa subunit; Protein DISTORTED TRICHOMES 2; p34-ARC", "protein_names_refseq": "Arp2/3 complex, 34 kD subunit p34-Arc", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G30825)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11910074;12913159;14593172;15086808;15295064;15653407;27862469", "class_list": "", "function": "Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (By similarity). Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SY27", "ec_number_list": [], "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005885 Arp2/3 protein complex;GO:0042995 cell projection", "go_biological_process": "GO:0007015 actin filament organization;GO:0030041 actin filament polymerization;GO:0034314 Arp2/3 complex-mediated actin nucleation;GO:0010090 trichome morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LGI3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGN1-1", "uniprot_id": [ { "id": "GLR14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGN1", "type": "external" } ], "mass": 97760.0, "length": 861, "protein_name": "Glutamate receptor 1.4", "gene_name": "GLR1.4", "organism": "Arabidopsis", "refseq_name": "glutamate receptor 1.4", "refseq_ac": [ { "id": "NP_187408", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187408", "type": "external" } ], "gene_names_uniprotkb": "GLR1.4; F21O3.23", "gene_names_refseq": "ATGLR1.4; GLR1.4; glutamate receptor 1.4", "protein_names_uniprotkb": "Glutamate receptor 1.4; Ligand-gated ion channel 1.4", "protein_names_refseq": "glutamate receptor 1.4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G07520)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;11379626;12082126;18625242;22060019;27862469", "class_list": "", "function": "Glutamate-gated receptor that probably acts as a non-selective cation channel. Can transport calcium ions. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q8LGN2;Q9SRR4", "ec_number_list": [], "go_molecular_function": "GO:0005262 calcium channel activity;GO:0015276 ligand-gated monoatomic ion channel activity;GO:0005261 monoatomic cation channel activity;GO:0038023 signaling receptor activity;GO:0008066 glutamate receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0019722 calcium-mediated signaling;GO:0006816 calcium ion transport;GO:0006874 intracellular calcium ion homeostasis;GO:0009416 response to light stimulus;GO:0071230 cellular response to amino acid stimulus", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LGN1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGU7-1", "uniprot_id": [ { "id": "RNZ1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGU7", "type": "external" } ], "mass": 31333.0, "length": 280, "protein_name": "tRNase Z TRZ1", "gene_name": "TRZ1", "organism": "Arabidopsis", "refseq_name": "tRNAse Z1", "refseq_ac": [ { "id": "NP_177608", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177608", "type": "external" } ], "gene_names_uniprotkb": "TRZ1; F1M20.38; F25A4.32; NUZ", "gene_names_refseq": "F25A4.32; F25A4_32; NUZ; RNASE Z; TRZ1; tRNAse Z1", "protein_names_uniprotkb": "tRNase Z TRZ1; 3.1.26.11; AthTRZS1; Nuclear RNase Z; Nuclear ribonuclease Z; Short tRNase Z 1; Zinc phosphodiesterase NUZ; tRNA 3 endonuclease; tRNase ZS1", "protein_names_refseq": "tRNAse Z1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G74700)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;12032089;16118225;16336119;18052196;19411372;19420328;27862469", "class_list": "", "function": "Zinc phosphodiesterase, which displays tRNA 3'-processing endonuclease activity (PubMed:12032089, PubMed:16118225, PubMed:18052196, PubMed:19411372). Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (PubMed:12032089, PubMed:18052196, PubMed:19411372). Can use bis-(p-nitophenyl) phosphate (bpNPP) as substrate (PubMed:18052196). Involved in the processing of small nucleolar RNAs (snoRNAs) (PubMed:19420328)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 27, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CA48;Q9SSF6", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0042781 3'-tRNA processing endoribonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0008033 tRNA processing;GO:0042780 tRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LGU7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LK56-3", "uniprot_id": [ { "id": "DME_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LK56", "type": "external" } ], "mass": 221147.0, "length": 1987, "protein_name": "Transcriptional activator DEMETER", "gene_name": "DME", "organism": "Arabidopsis", "refseq_name": "HhH-GPD base excision DNA repair family protein", "refseq_ac": [ { "id": "NP_001078527", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078527", "type": "external" } ], "gene_names_uniprotkb": "DME; T32M21.180", "gene_names_refseq": "AT5G04570; AT5G04580; DEMETER; DME; T32M21.160; T32M21_160", "protein_names_uniprotkb": "Transcriptional activator DEMETER; 3.2.2.-; DNA glycosylase-related protein DME", "protein_names_refseq": "HhH-GPD base excision DNA repair family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04560)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;11910074;12150995;14593172;15128940;16624880;27862469", "class_list": "", "function": "Transcriptional activator involved in gene imprinting. Catalyzes the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism. Allows the expression of the maternal copy of the imprinted MEA gene before fertilization, possibly by antagonizing or suppressing DNA methylation on target promoter. Probably acts by nicking the MEA promoter. Required for stable reproducible patterns of floral and vegetative development., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q1WEY5;Q84TL4;Q9LZ67;Q9LZ68;Q9LZ69", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0019104 DNA N-glycosylase activity;GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0043078 polar nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006284 base-excision repair;GO:0040029 epigenetic regulation of gene expression;GO:0009793 embryo development ending in seed dormancy;GO:0141166 chromosomal 5-methylcytosine DNA demethylation pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LK56-3", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LKS5-1", "uniprot_id": [ { "id": "LACS7_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LKS5", "type": "external" } ], "mass": 77353.0, "length": 700, "protein_name": "Long chain acyl-CoA synthetase 7, peroxisomal", "gene_name": "LACS7", "organism": "Arabidopsis", "refseq_name": "long-chain acyl-CoA synthetase 7", "refseq_ac": [ { "id": "NP_198112", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198112", "type": "external" } ], "gene_names_uniprotkb": "LACS7; F15A18.60", "gene_names_refseq": "ATLACS7; F15A18.60; F15A18_60; LACS7; long-chain acyl-CoA synthetase 7", "protein_names_uniprotkb": "Long chain acyl-CoA synthetase 7, peroxisomal; 6.2.1.3; AtLACS7", "protein_names_refseq": "long-chain acyl-CoA synthetase 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G27600)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;11910074;12177484;12366803;12805634;14742880;16256065;16844736;17272265;27862469", "class_list": "", "function": "Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation (Probable). Preferentially uses palmitate, palmitoleate, oleate, linoleate and eicosenoate as substrates (PubMed:12177484, PubMed:12366803). Can use myristate and linolenate as substrates (PubMed:12366803). Functions redundantly with LACS6 in lipid mobilization for beta-oxidation during seed germination, which is essential for postgerminative growth and seedling establishment (PubMed:14742880, PubMed:16844736)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GWV4", "ec_number_list": [ { "id": "6.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.3", "type": "external" }, { "id": "6.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.-", "type": "external" }, { "id": "6.2.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.12", "type": "external" }, { "id": "6.2.1.27", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.27", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004467 long-chain fatty acid-CoA ligase activity;GO:0102391 decanoate-CoA ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0009536 plastid", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0009651 response to salt stress;GO:0010193 response to ozone", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8LKS5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LLD0-1", "uniprot_id": [ { "id": "NUP96_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LLD0", "type": "external" } ], "mass": 119154.0, "length": 1046, "protein_name": "Nuclear pore complex protein NUP96", "gene_name": "NUP96", "organism": "Arabidopsis", "refseq_name": "SUPPRESSOR OF AUXIN RESISTANCE 3", "refseq_ac": [ { "id": "NP_178183", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178183", "type": "external" } ], "gene_names_uniprotkb": "NUP96; F23A5.3; MOS3; PRE; SAR3", "gene_names_refseq": "3; F23A5.3; F23A5_3; MODIFIER OF SNC1; MOS3; NUP96; PRECOCIOUS; PRE; SAR3; SUPPRESSOR OF AUXIN RESISTANCE 3", "protein_names_uniprotkb": "Nuclear pore complex protein NUP96; AtNUP96; Nucleoporin 96; Nucleoporin PRECOCIOUS; Nucleoporin PRECOZ; Protein MODIFIER OF SNC1 3; Protein SUPPRESSOR OF AUXIN RESISTANCE 3", "protein_names_refseq": "SUPPRESSOR OF AUXIN RESISTANCE 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80680)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130712;15772285;16751346;18463617;19245862;19376835;20466843;21189294;21203492;22288649;23111157;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27862469;28011693;30833711", "class_list": "", "function": "Contributes to the transfer of mature mRNA from the nucleus to the cytosol. Required for both R gene-mediated and basal disease resistance. RNA export seems to play a critical role in stress responses and regulation of plant growth and development., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38941;Q8LLD1", "ec_number_list": [], "go_molecular_function": "GO:0015288 porin activity;GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005643 nuclear pore;GO:0031965 nuclear membrane", "go_biological_process": "GO:0006952 defense response;GO:0015031 protein transport;GO:0002758 innate immune response-activating signaling pathway;GO:0051028 mRNA transport;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q8LLD0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LLD4-1", "uniprot_id": [ { "id": "REP_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LLD4", "type": "external" } ], "mass": 61511.0, "length": 563, "protein_name": "Rab escort protein 1", "gene_name": "REP", "organism": "Arabidopsis", "refseq_name": "Rab escort protein", "refseq_ac": [ { "id": "NP_187306", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187306", "type": "external" } ], "gene_names_uniprotkb": "REP; F5E6.13", "gene_names_refseq": "AthREP; F5E6.13; F5E6_13; REP; Rab escort protein", "protein_names_uniprotkb": "Rab escort protein 1; AthREP", "protein_names_refseq": "Rab escort protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06540)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;15854662;17140818;26589801;27862469", "class_list": "", "function": "Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component composed of the alpha subunit RGTA and the beta subunit RGTB (Probable). Preferentially binds the GDP-bound form of Rab and stimulates geranylgeranylation of various Rab GTPases in vitro (PubMed:15854662)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LPP8;Q9C8Z5", "ec_number_list": [], "go_molecular_function": "GO:0004663 Rab geranylgeranyltransferase activity;GO:0005096 GTPase activator activity;GO:0031267 small GTPase binding;GO:0005092 GDP-dissociation inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005968 Rab-protein geranylgeranyltransferase complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006612 protein targeting to membrane;GO:0007264 small GTPase-mediated signal transduction;GO:0016192 vesicle-mediated transport;GO:2000541 positive regulation of protein geranylgeranylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LLD4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LLV8-1", "uniprot_id": [ { "id": "PLS_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LLV8", "type": "external" } ], "mass": 4390.0, "length": 36, "protein_name": "Peptide POLARIS", "gene_name": "PLS", "organism": "Arabidopsis", "refseq_name": "polari", "refseq_ac": [ { "id": "NP_001031813", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031813", "type": "external" } ], "gene_names_uniprotkb": "PLS; EM101; F23K16", "gene_names_refseq": "PLS; POLARIS", "protein_names_uniprotkb": "Peptide POLARIS; AtEM101; Protein expressed in embryo 101", "protein_names_refseq": "polari", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39403)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;10645417;12172017;17138700;23577016;27862469;8054995;9368412", "class_list": "", "function": "Required for correct root growth and vascular development, probably by modulating both cell division rate in meristems and cell elongation in roots. Negative regulator of the ethylene signaling pathway that modulates microtubule cytoskeleton dynamics and auxin transport and homeostasis, and possibly cytokinin signaling, thus influencing root growth and lateral root development., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005507 copper ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0012505 endomembrane system", "go_biological_process": "GO:0070507 regulation of microtubule cytoskeleton organization;GO:0009736 cytokinin-activated signaling pathway;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0009735 response to cytokinin", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LLV8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LNZ2-1", "uniprot_id": [ { "id": "KN7B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LNZ2", "type": "external" } ], "mass": 106521.0, "length": 938, "protein_name": "Kinesin-like protein KIN-7B", "gene_name": "KIN7B", "organism": "Arabidopsis", "refseq_name": "ATP binding microtubule motor family protein", "refseq_ac": [ { "id": "NP_001319676", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319676", "type": "external" } ], "gene_names_uniprotkb": "KIN7B; F7K15.60; NACK2; STD; TES", "gene_names_refseq": "ARABIDOPSIS NPK1-ACTIVATING KINESIN 2; ATNACK2; NACK2; NPK1-ACTIVATING KINESIN 2; TES; TETRASPORE", "protein_names_uniprotkb": "Kinesin-like protein KIN-7B; AtNACK2; NPK1-activating kinesin-2; Protein STUD; Protein TETRASPORE", "protein_names_refseq": "ATP binding microtubule motor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G43210)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130713;11472632;11955449;12694597;15569152;16448571;19825582;20802223;21575092;22038119;23660473;24146312;27862469;9217006;9224679", "class_list": "", "function": "Probable plus end-directed motor protein that functions in the NACK-PQR (ANP3-MKK6-MPK4) MAP kinase signaling pathway, which is essential for somatic cell cytokinesis, especially for the cell-plate formation and its expansion. May regulate the activity and the localization of ANP3, probably by association through the non-catalytic region of the kinase. Functionally redundant with NACK1 and essential to promote the progression of cytokinesis and for cellularization (formation of the cell plate) during microgametogenesis and megagametogenesis., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A1I9LTQ9;Q8L5J2;Q8LGU3;Q9LXL3", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005874 microtubule;GO:0009506 plasmodesma;GO:0009524 phragmoplast", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0007112 male meiosis cytokinesis;GO:0000911 cytokinesis by cell plate formation;GO:0009555 pollen development;GO:0048229 gametophyte development", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8LNZ2-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPJ1-1", "uniprot_id": [ { "id": "CKL6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPJ1", "type": "external" } ], "mass": 54025.0, "length": 479, "protein_name": "Casein kinase 1-like protein 6", "gene_name": "CKL6", "organism": "Arabidopsis", "refseq_name": "casein kinase I-like 6", "refseq_ac": [ { "id": "NP_567812", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567812", "type": "external" } ], "gene_names_uniprotkb": "CKL6; F20O9.240; PAPK1", "gene_names_refseq": "CKL6; F20O9.240; F20O9_240; PAPK1; casein kinase I-like 6", "protein_names_uniprotkb": "Casein kinase 1-like protein 6; 2.7.11.1; Plasmodesmal-associated protein kinase 1; Protein CASEIN KINASE I-LIKE 6", "protein_names_refseq": "casein kinase I-like 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28540)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;16126836;18945931;19820321;19941015;25561503;27862469", "class_list": "", "function": "Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins (By similarity). Phosphorylates tubulins and microtubules in vitro (PubMed:18945931). Involved in anisotropic cell growth and cell shape formation via the regulation of microtubule organization (PubMed:18945931, PubMed:19820321)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65463;Q8LFV8", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0015631 tubulin binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0030054 cell junction", "go_biological_process": "GO:0006897 endocytosis;GO:0007165 signal transduction;GO:0046777 protein autophosphorylation;GO:0001558 regulation of cell growth;GO:0043622 cortical microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LPJ1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPK5-1", "uniprot_id": [ { "id": "CESA8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPK5", "type": "external" } ], "mass": 111521.0, "length": 985, "protein_name": "Cellulose synthase A catalytic subunit 8 [UDP-forming]", "gene_name": "CESA8", "organism": "Arabidopsis", "refseq_name": "cellulose synthase family protein", "refseq_ac": [ { "id": "NP_567564", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567564", "type": "external" } ], "gene_names_uniprotkb": "CESA8; F28A21.190; IRX1; LEW2", "gene_names_refseq": "ATCESA8; CELLULOSE SYNTHASE 8; CESA8; F28A21.190; F28A21_190; IRREGULAR XYLEM 1; IRX1; LEAF WILTING 2; LEW2", "protein_names_uniprotkb": "Cellulose synthase A catalytic subunit 8 [UDP-forming]; 2.4.1.12; AtCesA8; AtIRX1; Protein IRREGULAR XYLEM 1; Protein LEAF WILTING 2", "protein_names_refseq": "cellulose synthase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18780)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;11148295;11178255;12481071;12538856;12897249;14593172;15998313;17351116;27277162;27387950;27862469;9165747", "class_list": "glycogene;glycosyltransferase", "function": "Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9C5Z8;Q9SN37", "ec_number_list": [ { "id": "2.4.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.12", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016760 cellulose synthase (UDP-forming) activity;GO:0016759 cellulose synthase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation;GO:0050832 defense response to fungus;GO:0030244 cellulose biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8LPK5-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPL3-1", "uniprot_id": [ { "id": "ASO_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPL3", "type": "external" } ], "mass": 64266.0, "length": 573, "protein_name": "L-ascorbate oxidase", "gene_name": "AAO", "organism": "Arabidopsis", "refseq_name": "Plant L-ascorbate oxidase", "refseq_ac": [ { "id": "NP_197609", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197609", "type": "external" } ], "gene_names_uniprotkb": "AAO; AO; T10F18.130", "gene_names_refseq": "T10F18.130; T10F18_130", "protein_names_uniprotkb": "L-ascorbate oxidase; 1.10.3.3; AAO; AO; ASO; Ascorbase", "protein_names_refseq": "Plant L-ascorbate oxidase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21100)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;15883131;27255930;27862469", "class_list": "", "function": "Ascorbate oxidase involved in a redox system involving ascorbic acid (AsA) (PubMed:15883131, PubMed:27255930). The oxidation of AsA represses responses to high salinity and oxidative stress conditions such as vegetative growth and seed production reductions (PubMed:15883131). Negative regulator of defense responses toward incompatible Turnip mosaic virus (TuMV strain UK1) by preventing jasmonic acid (JA)- dependent accumulation of ascorbic acid (AsA, AS) and dehydroascobic acid (DHA) (PubMed:27255930)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.10.3.3", "url": "https://www.rhea-db.org/rhea/?query=ec:1.10.3.3", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0005507 copper ion binding;GO:0008447 L-ascorbate oxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009536 plastid", "go_biological_process": "GO:0006952 defense response;GO:0006979 response to oxidative stress;GO:0042542 response to hydrogen peroxide;GO:0009615 response to virus;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8LPL3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPL5-1", "uniprot_id": [ { "id": "FZR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPL5", "type": "external" } ], "mass": 52378.0, "length": 481, "protein_name": "Protein FIZZY-RELATED 3", "gene_name": "FZR3", "organism": "Arabidopsis", "refseq_name": "FIZZY-related 3", "refseq_ac": [ { "id": "NP_001190305", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190305", "type": "external" } ], "gene_names_uniprotkb": "FZR3; CCS52B; CDH1-3; MAC12.21", "gene_names_refseq": "CCS52B; FIZZY-related 3; FZR3; MAC12.21; MAC12_21; cell cycle switch protein 52 B", "protein_names_uniprotkb": "Protein FIZZY-RELATED 3; Cell cycle switch protein CCS52B", "protein_names_refseq": "FIZZY-related 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13840)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "12597875;14593172;15970679;21087491;21687678;22167058;22844260;27862469;9330910", "class_list": "", "function": "Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FFY8", "ec_number_list": [], "go_molecular_function": "GO:0010997 anaphase-promoting complex binding;GO:1990757 ubiquitin ligase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process;GO:1905786 positive regulation of anaphase-promoting complex-dependent catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8LPL5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPN3-1", "uniprot_id": [ { "id": "ADCS_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPN3", "type": "external" } ], "mass": 102920.0, "length": 919, "protein_name": "Aminodeoxychorismate synthase, chloroplastic", "gene_name": "ADCS", "organism": "Arabidopsis", "refseq_name": "para-aminobenzoate (PABA) synthase family protein", "refseq_ac": [ { "id": "NP_850127", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850127", "type": "external" } ], "gene_names_uniprotkb": "ADCS; EMB1997; F8N16.17", "gene_names_refseq": "ADCS; Aminodeoxychorismate synthase; F8N16.17; F8N16_17; aminodeoxychorismate synthase; emb1997; embryo defective 1997", "protein_names_uniprotkb": "Aminodeoxychorismate synthase, chloroplastic; 2.6.1.85; ADC synthase; P-aminobenzoic acid synthase; PABA synthase; Para-aminobenzoate synthase; Protein EMBRYO DEFFECTIVE 1997", "protein_names_refseq": "para-aminobenzoate (PABA) synthase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28880)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;14745019;16466344;20851095;27862469", "class_list": "", "function": "Bifunctional enzyme that catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine. In the first step, a glutamine amidotransferase generates ammonia that is channelled between the binding sites of glutamine and chorismate and used along with chorismate in the second step, catalyzed by aminodeoxychorismate synthase, to produce ADC. Required for the synthesis of 4-aminobenzoate (PABA), an important component in tetrahydrofolate biosynthesis. Does not possess ADC lyase activity., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZV26", "ec_number_list": [ { "id": "2.6.1.85", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.85", "type": "external" } ], "go_molecular_function": "GO:0046820 4-amino-4-deoxychorismate synthase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0046654 tetrahydrofolate biosynthetic process;GO:0008153 4-aminobenzoate biosynthetic process;GO:0046417 chorismate metabolic process;GO:0046656 folic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LPN3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPR9-1", "uniprot_id": [ { "id": "TI110_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPR9", "type": "external" } ], "mass": 112121.0, "length": 1016, "protein_name": "Protein TIC110, chloroplastic", "gene_name": "TIC110", "organism": "Arabidopsis", "refseq_name": "translocon at the inner envelope membrane of chloroplasts 110", "refseq_ac": [ { "id": "NP_172176", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172176", "type": "external" } ], "gene_names_uniprotkb": "TIC110; F10K1.33; F4H5.1", "gene_names_refseq": "ARABIDOPSIS THALIANA TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110; ATTIC110; TIC110; translocon at the inner envelope membrane of chloroplasts 110", "protein_names_uniprotkb": "Protein TIC110, chloroplastic; AtTIC110; Translocon at the inner envelope membrane of chloroplasts 110", "protein_names_refseq": "translocon at the inner envelope membrane of chloroplasts 110", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06950)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;12032074;12874276;14593172;15033972;15659100;15829604;17060496;17144891;19376835;20100520;20484004;21505433;22223895;23111157;25561503;27862469;9632730", "class_list": "", "function": "Involved in protein precursor import into chloroplasts. Forms a voltage-dependent cation-selective channel at the inner envelope of chloroplasts, which specifically responds to a transit peptide. Associates with both the precursor and mature forms of the preprotein., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WMF8;Q8LPG5;Q9LMI9;Q9M9Z7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031897 Tic complex", "go_biological_process": "GO:0009658 chloroplast organization;GO:0045037 protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8LPR9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPS1-1", "uniprot_id": [ { "id": "LACS6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPS1", "type": "external" } ], "mass": 76603.0, "length": 701, "protein_name": "Long chain acyl-CoA synthetase 6, peroxisomal", "gene_name": "LACS6", "organism": "Arabidopsis", "refseq_name": "long-chain acyl-CoA synthetase 6", "refseq_ac": [ { "id": "NP_566265", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566265", "type": "external" } ], "gene_names_uniprotkb": "LACS6; F2O10.7", "gene_names_refseq": "ATLACS6; F2O10.7; F2O10_7; LACS6; long-chain acyl-CoA synthetase 6", "protein_names_uniprotkb": "Long chain acyl-CoA synthetase 6, peroxisomal; 6.2.1.3; AtLACS6", "protein_names_refseq": "long-chain acyl-CoA synthetase 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G05970)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;12177484;12366803;12481085;12805634;14593172;14742880;16256065;16844736;27862469", "class_list": "", "function": "Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation (Probable). Preferentially uses palmitate, palmitoleate, oleate, linoleate and eicosenoate as substrates (PubMed:12177484, PubMed:12366803). Can use myristate and linolenate as substrates (PubMed:12366803). May play a regulatory role both in fatty acid import into glyoxysomes and in fatty acid beta-oxidation (PubMed:12481085). Functions redundantly with LACS7 in lipid mobilization for beta-oxidation during seed germination, which is essential for postgerminative growth and seedling establishment (PubMed:14742880, PubMed:16844736)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LKS6;Q9C5U7;Q9SFG1", "ec_number_list": [ { "id": "6.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.3", "type": "external" }, { "id": "6.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.-", "type": "external" }, { "id": "6.2.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.12", "type": "external" }, { "id": "6.2.1.27", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.27", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004467 long-chain fatty acid-CoA ligase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0010193 response to ozone", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8LPS1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LPS2-1", "uniprot_id": [ { "id": "ACD6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LPS2", "type": "external" } ], "mass": 73527.0, "length": 670, "protein_name": "Protein ACCELERATED CELL DEATH 6", "gene_name": "ACD6", "organism": "Arabidopsis", "refseq_name": "ankyrin repeat family protein", "refseq_ac": [ { "id": "NP_567430", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567430", "type": "external" } ], "gene_names_uniprotkb": "ACD6; FCAALL.190; dl3240w", "gene_names_refseq": "ACCELERATED CELL DEATH 6; ACD6; DL3240W; FCAALL.190", "protein_names_uniprotkb": "Protein ACCELERATED CELL DEATH 6", "protein_names_refseq": "ankyrin repeat family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14400)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10488236;10617198;11722764;11910074;14507999;14593172;16297071;19144005;19376835;19423640;19959255;20520716;21768351;23111157;24923602;25561503;27862469;9461215", "class_list": "", "function": "Dose-dependent activator of the defense response against virulent pathogens, including bacteria, fungi and oomycetes, that acts in a positive feedback loop with the defense signal salicylic acid (SA) (PubMed:10488236, PubMed:14507999, PubMed:16297071, PubMed:19144005, PubMed:20520716). Regulates the salicylic acid (SA) signaling pathway leading to cell death and modulating cell fate (e.g. cell enlargement and/or cell division) (PubMed:10488236, PubMed:11722764, PubMed:14507999). In response to SA signaling, triggers the accumulation of FLS2 at the plasma membrane, thus priming defenses (PubMed:24923602). Involved in SA-dependent freezing signaling and tolerance (PubMed:19959255)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 15, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFF6;D9IWZ2;O23296;Q56YD7;Q682F8;Q8GW50", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0009615 response to virus;GO:0016567 protein ubiquitination;GO:0042742 defense response to bacterium;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8LPS2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LRK8-1", "uniprot_id": [ { "id": "HDA18_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LRK8", "type": "external" } ], "mass": 76634.0, "length": 682, "protein_name": "Histone deacetylase 18", "gene_name": "HDA18", "organism": "Arabidopsis", "refseq_name": "histone deacetylase of the RPD3/HDA1 superfamily 18", "refseq_ac": [ { "id": "NP_200915", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200915", "type": "external" } ], "gene_names_uniprotkb": "HDA18; MAF19.8", "gene_names_refseq": "A. THALIANA HISTONE DEACETYLASE OF THE RPD3/HDA1 SUPERFAMILY 18; ATHDA18; HDA18; MAF19.8; MAF19_8; histone deacetylase of the RPD3/HDA1 superfamily 18", "protein_names_uniprotkb": "Histone deacetylase 18; 3.5.1.98", "protein_names_refseq": "histone deacetylase of the RPD3/HDA1 superfamily 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G61070)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "12466527;16176989;22363501;23362208;27862469;9405937", "class_list": "", "function": "Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4) (PubMed:23362208). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (Probable). Histone deacetylases act via the formation of large multiprotein complexes (Probable). Required for appropriate cellular patterning in the root epidermis (PubMed:16176989, PubMed:23362208). Involved in the differentiation of hair and non-hair cells in the root epidermis (PubMed:23362208). Is not directly involved in the regulation of the expression of pattern genes (PubMed:23362208). Regulates the transcription of certain kinase genes, which are components of a positional information relay system, by changing their histone acetylation status (PubMed:23362208)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FNQ7", "ec_number_list": [ { "id": "3.5.1.98", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.98", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004407 histone deacetylase activity;GO:0141221 histone deacetylase activity, hydrolytic mechanism", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0050793 regulation of developmental process;GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0040029 epigenetic regulation of gene expression;GO:0010053 root epidermal cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LRK8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LSZ4-1", "uniprot_id": [ { "id": "E2FE_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LSZ4", "type": "external" } ], "mass": 45461.0, "length": 403, "protein_name": "E2F transcription factor-like E2FE", "gene_name": "E2FE", "organism": "Arabidopsis", "refseq_name": "DP-E2F-like 1", "refseq_ac": [ { "id": "NP_190399", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190399", "type": "external" } ], "gene_names_uniprotkb": "E2FE; DEL1; E2L3; ELP2; T24C20.40", "gene_names_refseq": "DEL1; DP-E2F-LIKE PROTEIN 1; DP-E2F-like 1; E2F-LIKE 3; E2FE; E2L3", "protein_names_uniprotkb": "E2F transcription factor-like E2FE; DP-E2F-like protein 1; E2F-like repressor E2L3", "protein_names_refseq": "DP-E2F-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48160)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;11786543;11867638;11971144;14593172;15649366;18787127;27862469", "class_list": "", "function": "Inhibitor of E2F-dependent activation of gene expression. Binds specifically the E2 recognition site without interacting with DP proteins and prevents transcription activation by E2F/DP heterodimers. Controls the timing of endocycle onset and inhibits endoreduplication., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8RYD8;Q9STS2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0090575 RNA polymerase II transcription regulator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0032876 negative regulation of DNA endoreduplication;GO:0042023 DNA endoreduplication", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LSZ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RUD6-1", "uniprot_id": [ { "id": "HARC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RUD6", "type": "external" } ], "mass": 19039.0, "length": 169, "protein_name": "Protein HIGH ARSENIC CONTENT 1, mitochondrial", "gene_name": "HAC1", "organism": "Arabidopsis", "refseq_name": "Rhodanese/Cell cycle control phosphatase superfamily protein", "refseq_ac": [ { "id": "NP_565497", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565497", "type": "external" } ], "gene_names_uniprotkb": "HAC1; ATQ1; F26H11; F5H14; STR19", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein HIGH ARSENIC CONTENT 1, mitochondrial; 1.20.4.1; Arsenate reductase; Arsenate tolerance QTL1; AtATQ1; AtHAC1; AtStr19; Rhodanese-like domain-containing protein 19; Sulfurtransferase 19", "protein_names_refseq": "Rhodanese/Cell cycle control phosphatase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G21045)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;17408957;25099865;25464340;27862469", "class_list": "", "function": "Arsenate reductase critical for arsenic tolerance (PubMed:25099865). Reduces arsenate to arsenite in the root, facilitating efflux of arsenic back into the soil to limit both its accumulation in the root and transport to the shoot (PubMed:25464340). Essential for arsenite efflux from the root, but not necessary for arsenate uptake (PubMed:25464340)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WSX5;Q7Y234", "ec_number_list": [ { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "1.20.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.1", "type": "external" } ], "go_molecular_function": "GO:0008794 arsenate reductase (glutaredoxin) activity;GO:0030611 arsenate reductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0046685 response to arsenic-containing substance;GO:0071722 detoxification of arsenic-containing substance", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RUD6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RUF8-1", "uniprot_id": [ { "id": "NILP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RUF8", "type": "external" } ], "mass": 40330.0, "length": 369, "protein_name": "Omega-amidase, chloroplastic", "gene_name": "NLP3", "organism": "Arabidopsis", "refseq_name": "Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein", "refseq_ac": [ { "id": "NP_196765", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196765", "type": "external" } ], "gene_names_uniprotkb": "NLP3; F14F18.210", "gene_names_refseq": "F14F18.210; F14F18_210", "protein_names_uniprotkb": "Omega-amidase, chloroplastic; 3.5.1.3; Nitrilase-like protein 3", "protein_names_refseq": "Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G12040)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;12435743;14593172;14993207;22074104;22223895;24461228;25561503;27862469", "class_list": "", "function": "Omega-amidase involved in the metabolism of asparagine. Probably also closely coupled with glutamine transamination in the methionine salvage cycle. Can use alpha-ketosuccinamate and alpha-hydroxysuccinamate as substrates, producing respectively oxaloacetate and malate, or alpha-ketoglutaramate, producing alpha-ketoglutarate., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JZF7;Q9LYH1", "ec_number_list": [ { "id": "3.5.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.3", "type": "external" } ], "go_molecular_function": "GO:0050152 omega-amidase activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006528 asparagine metabolic process;GO:0006107 oxaloacetate metabolic process;GO:0006541 glutamine metabolic process;GO:0006108 malate metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RUF8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RUS5-1", "uniprot_id": [ { "id": "ATG9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RUS5", "type": "external" } ], "mass": 99467.0, "length": 866, "protein_name": "Autophagy-related protein 9", "gene_name": "ATG9", "organism": "Arabidopsis", "refseq_name": "autophagy 9 (APG9)", "refseq_ac": [ { "id": "NP_850164", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850164", "type": "external" } ], "gene_names_uniprotkb": "ATG9; APG9", "gene_names_refseq": "APG9; ATAPG9; ATG9; F16D14.10; F16D14_10; autophagy 9", "protein_names_uniprotkb": "Autophagy-related protein 9; AtAPG9", "protein_names_refseq": "autophagy 9 (APG9)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31260)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;12114572;14593172;24249832;24805779;27862469;31276439", "class_list": "", "function": "Phospholipid scramblase involved in autophagy by mediating autophagosomal membrane expansion (PubMed:12114572, PubMed:24805779). Cycles between the preautophagosomal structure/phagophore assembly site (PAS) and the cytoplasmic vesicle pool and supplies membrane for the growing autophagosome. Lipid scramblase activity plays a key role in preautophagosomal structure/phagophore assembly by distributing the phospholipids that arrive through ATG2 from the cytoplasmic to the luminal leaflet of the bilayer, thereby driving autophagosomal membrane expansion (By similarity). In addition to autophagy, also plays a role in necrotic cell death (By similarity). Plays an essential role in plant nutrient recycling (PubMed:12114572)., [UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJX0", "ec_number_list": [], "go_molecular_function": "GO:0017128 phospholipid scramblase activity", "go_cellular_component": "GO:0005776 autophagosome;GO:0034045 phagophore assembly site membrane;GO:0000407 phagophore assembly site;GO:0009507 chloroplast", "go_biological_process": "GO:0006914 autophagy;GO:0034497 protein localization to phagophore assembly site;GO:0009408 response to heat;GO:0000423 mitophagy;GO:0034727 piecemeal microautophagy of the nucleus", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RUS5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RVQ9-1", "uniprot_id": [ { "id": "CENH3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RVQ9", "type": "external" } ], "mass": 19709.0, "length": 178, "protein_name": "Histone H3-like centromeric protein CENH3", "gene_name": "CENH3", "organism": "Arabidopsis", "refseq_name": "Histone superfamily protein", "refseq_ac": [ { "id": "NP_001030927", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030927", "type": "external" } ], "gene_names_uniprotkb": "CENH3; F6F3.17; HTR12", "gene_names_refseq": "CENH3; CENTROMERIC HISTONE H3; F6F3.17; F6F3_17; HTR12", "protein_names_uniprotkb": "Histone H3-like centromeric protein CENH3; Centromeric histone CENH3; Centromeric histone H3; Histone H3-like centromeric protein HTR12", "protein_names_refseq": "Histone superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;12034896;16262706;17028205;17242155;21695238;25561503;27862469;31404279", "class_list": "", "function": "Histone H3-like variant which exclusively replaces conventional H3 in the nucleosome core of centromeric chromatin at the inner plate of the kinetochore. Required for recruitment and assembly of kinetochore proteins, mitotic progression and chromosome segregation. May serve as an epigenetic mark that propagates centromere identity through replication and cell division (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCW8;Q9LNI6", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:0031492 nucleosomal DNA binding;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region;GO:0000776 kinetochore;GO:0000785 chromatin;GO:0000786 nucleosome", "go_biological_process": "GO:0051307 meiotic chromosome separation;GO:0051301 cell division;GO:0034080 CENP-A containing chromatin assembly;GO:0051321 meiotic cell cycle;GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RVQ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RW90-1", "uniprot_id": [ { "id": "FAH_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RW90", "type": "external" } ], "mass": 46095.0, "length": 421, "protein_name": "Fumarylacetoacetase", "gene_name": "FAH", "organism": "Arabidopsis", "refseq_name": "fumarylacetoacetase", "refseq_ac": [ { "id": "NP_172669", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172669", "type": "external" } ], "gene_names_uniprotkb": "FAH; F12F1.8; SSCD1", "gene_names_refseq": "AtFAH; F12F1.8; F12F1_8; FAH; SSCD1; fumarylacetoacetate hydrolase; short-day sensitive cell deathshort-day sensitive cell deathshort-day sensitive cell death 111", "protein_names_uniprotkb": "Fumarylacetoacetase; 3.7.1.2; AtFAH; Fumarylacetoacetate hydrolase; Protein SHORT-DAY SENSITIVE CELL DEATH 1", "protein_names_refseq": "fumarylacetoacetase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12050)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;22980205;23743712;27097641;27862469", "class_list": "", "function": "Converts fumarylacetoacetate to acetoacetate and fumarate (PubMed:22980205). Involved in tyrosine catabolic pathway. Catalyzes the final step in the tyrosine degradation pathway (PubMed:22980205, PubMed:23743712, PubMed:27097641)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65374", "ec_number_list": [ { "id": "3.7.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.7.1.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004334 fumarylacetoacetase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005829 cytosol", "go_biological_process": "GO:0006559 L-phenylalanine catabolic process;GO:0006572 L-tyrosine catabolic process;GO:1902000 homogentisate catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RW90-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWE8-1", "uniprot_id": [ { "id": "GGAP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWE8", "type": "external" } ], "mass": 48970.0, "length": 442, "protein_name": "GDP-L-galactose phosphorylase 1", "gene_name": "VTC2", "organism": "Arabidopsis", "refseq_name": "GDP-L-galactose phosphorylase 1", "refseq_ac": [ { "id": "NP_567759", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567759", "type": "external" } ], "gene_names_uniprotkb": "VTC2; F10M23.190", "gene_names_refseq": "F10M23.190; F10M23_190; VTC2; vitamin c defective 2", "protein_names_uniprotkb": "GDP-L-galactose phosphorylase 1; 2.7.7.69; Protein VITAMIN C DEFECTIVE 2", "protein_names_refseq": "GDP-L-galactose phosphorylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26850)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;12068090;12119013;14593172;16262714;17462988;17485667;17877701;17982713;18463094;18516687;23111157;26091701;27862469", "class_list": "", "function": "Catalyzes a reaction of the Smirnoff-Wheeler pathway, the major route to ascorbate biosynthesis in plants. Acts as a phosphorylase rather than as a transferase. Uses preferentially GDP-L-galactose and GDP-D-glucose as substrates. Lower activity with GDP-L-fucose, very low activity with GDP-D-mannose, and no activity with UDP-D-glucose, UDP-D-galactose or ADP-D-glucose. Highly specific for inorganic phosphate as the guanylyl acceptor., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LKQ7;Q940B4;Q9SZ25", "ec_number_list": [ { "id": "2.7.7.69", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.69", "type": "external" } ], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0000166 nucleotide binding;GO:0005085 guanyl-nucleotide exchange factor activity;GO:0080048 GDP-D-glucose phosphorylase activity;GO:0080046 quercetin 4'-O-glucosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006006 glucose metabolic process;GO:0042742 defense response to bacterium;GO:0009408 response to heat;GO:0019853 L-ascorbic acid biosynthetic process;GO:0019852 L-ascorbic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8RWE8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWH9-1", "uniprot_id": [ { "id": "NUP58_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWH9", "type": "external" } ], "mass": 56542.0, "length": 513, "protein_name": "Nuclear pore complex protein NUP58", "gene_name": "NUP58", "organism": "Arabidopsis", "refseq_name": "hydroxyproline-rich glycoprotein family protein", "refseq_ac": [ { "id": "NP_195430", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195430", "type": "external" } ], "gene_names_uniprotkb": "NUP58; C7A10.230; TCU1", "gene_names_refseq": "AP22.15; AP22_15; TCU1; TRANSCURVATA 1", "protein_names_uniprotkb": "Nuclear pore complex protein NUP58; Nucleoporin 58; Protein TRANSCURVATA1", "protein_names_refseq": "hydroxyproline-rich glycoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37130)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;21189294;23840761;27862469;9461215", "class_list": "", "function": "Involved in nucleocytoplasmic trafficking. May have regulatory roles in the gibberellin pathway, in auxin signaling and in light perception., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O23173", "ec_number_list": [], "go_molecular_function": "GO:0017056 structural constituent of nuclear pore;GO:0008139 nuclear localization sequence binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005643 nuclear pore", "go_biological_process": "GO:0015031 protein transport;GO:0051028 mRNA transport", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RWH9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWI0-1", "uniprot_id": [ { "id": "FLAP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWI0", "type": "external" } ], "mass": 42844.0, "length": 391, "protein_name": "FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic", "gene_name": "FLAP1", "organism": "Arabidopsis", "refseq_name": "myelin-associated oligodendrocyte basic protein", "refseq_ac": [ { "id": "NP_564660", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564660", "type": "external" } ], "gene_names_uniprotkb": "FLAP1; F20D21.34", "gene_names_refseq": "", "protein_names_uniprotkb": "FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic", "protein_names_refseq": "myelin-associated oligodendrocyte basic protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54520)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;19376835;21768351;25561503;27862469;29016945;30390180;37339934", "class_list": "", "function": "Monitors proton H(+) homeostasis in chloroplasts to manipulate luminal acidification levels appropriately to balance photoprotection and photochemical processes (PubMed:30390180). Required during acclimation response to fluctuating light (e.g. photosynthetic activity optimization) by controlling non-photochemical quenching (NPQ); acts independently from DLDG1 (PubMed:29016945, PubMed:37339934)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FPD7;Q9SLI1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009643 photosynthetic acclimation;GO:0010196 nonphotochemical quenching", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RWI0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWK8-1", "uniprot_id": [ { "id": "COIL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWK8", "type": "external" } ], "mass": 68667.0, "length": 608, "protein_name": "Coilin", "gene_name": "COIL", "organism": "Arabidopsis", "refseq_name": "sphere organelles protein-like protein", "refseq_ac": [ { "id": "NP_172762", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172762", "type": "external" } ], "gene_names_uniprotkb": "COIL; F3F19.5", "gene_names_refseq": "Atcoilin; COILIN; F3F19.5; F3F19_5; coilin", "protein_names_uniprotkb": "Coilin; Atcoilin", "protein_names_refseq": "sphere organelles protein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G13030)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;14593172;16624863;19376835;20466843;21768351;23111157;23320094;23660473;23776212;25561503;26091701;26187819;27862469;30833711", "class_list": "", "function": "Probable component of nuclear coiled bodies, also known as Cajal bodies or CBs, which are involved in the modification and assembly of nucleoplasmic snRNPs (Probable). Required for CBs formation (PubMed:16624863). Binds snRNAs and non-specific artificial RNA via the N-terminal part of the NOD domain and via the NLS2 region (212-282) of the IDD domain (PubMed:23320094). The two sites are able to function independently and provide effective RNA-binding in a non-cooperative manner (PubMed:23320094)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SAD8", "ec_number_list": [], "go_molecular_function": "GO:0030620 U2 snRNA binding;GO:0030619 U1 snRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0015030 Cajal body", "go_biological_process": "GO:0006396 RNA processing;GO:0000387 spliceosomal snRNP assembly", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8RWK8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWL4-1", "uniprot_id": [ { "id": "IDM2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWL4", "type": "external" } ], "mass": 39395.0, "length": 349, "protein_name": "Increased DNA methylation 2", "gene_name": "IDM2", "organism": "Arabidopsis", "refseq_name": "HSP20-like chaperones superfamily protein", "refseq_ac": [ { "id": "NP_175881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175881", "type": "external" } ], "gene_names_uniprotkb": "IDM2; ACD39.4; F14C21.38; ROS5; T22H22.23", "gene_names_refseq": "IDM2; T22H22.23; T22H22_23; increased DNA methylation 2", "protein_names_uniprotkb": "Increased DNA methylation 2; Alpha-crystallin domain-containing protein 39.4; AtAcd39.4; Protein ROS5; Repressor of silencing 5", "protein_names_refseq": "HSP20-like chaperones superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54840)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;16531488;24920332;25002145;25593350;25684209;27862469", "class_list": "", "function": "Prevents DNA hypermethylation and transcriptional silencing of transgenes and of some endogenous genes (PubMed:24920332, PubMed:25002145). May act as a molecular chaperone of IDM1, regulating its H3K18 acetylation activity (PubMed:24920332, PubMed:25002145)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HYL2;Q9ZVL2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8RWL4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWL6-1", "uniprot_id": [ { "id": "STY17_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWL6", "type": "external" } ], "mass": 64696.0, "length": 570, "protein_name": "Serine/threonine-protein kinase STY17", "gene_name": "STY17", "organism": "Arabidopsis", "refseq_name": "ACT-like protein tyrosine kinase family protein", "refseq_ac": [ { "id": "NP_195303", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195303", "type": "external" } ], "gene_names_uniprotkb": "STY17; F8D20.290", "gene_names_refseq": "F4B14.1; STY17; serine/threonine/tyrosine kinase 17", "protein_names_uniprotkb": "Serine/threonine-protein kinase STY17; 2.7.11.1; Serine/threonine/tyrosine-protein kinase 17", "protein_names_refseq": "ACT-like protein tyrosine kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35780)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617198;14593172;16429265;17090544;19376835;20466843;21799034;23111157;23328941;23572148;23660473;23776212;24601666;25561503;27419465;27862469;29167316;29654922;30833711", "class_list": "", "function": "Serine/threonine protein kinase that specifically phosphorylates chloroplast precursor proteins in the cytosol within the cleavable presequences (transit peptides). May be part of a cytosolic regulatory network involved in chloroplast protein import. Does not phosphorylate mitochondrion precursor proteins. Specific for ATP and does not utilize other NTPs (PubMed:16429265, PubMed:17090544). Plays a role in chloroplast biogenesis and differentiation in cotyledons, possibly through phosphorylation of chloroplast preproteins (PubMed:21799034)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81808", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0007165 signal transduction;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8RWL6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWM6-1", "uniprot_id": [ { "id": "P24D5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWM6", "type": "external" } ], "mass": 24346.0, "length": 216, "protein_name": "Transmembrane emp24 domain-containing protein p24delta5", "gene_name": "T26F17.12", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T26F17.12", "gene_names_refseq": "", "protein_names_uniprotkb": "Transmembrane emp24 domain-containing protein p24delta5; Atp24; p24 family protein delta1c; p24 family protein delta5; p24delta1c; p24delta5", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G21900)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;18266912;22132757;22577184;27862469", "class_list": "", "function": "Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side (By similarity). Interacts with p24beta2 at endoplasmic reticulum export sites for endoplasmic reticulum exit and coupled transport to the Golgi apparatus. Once in the Golgi, interacts very efficiently with the COPI machinery for retrograde transport back to the endoplasmic reticulum., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9SFE6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0030134 COPII-coated ER to Golgi transport vesicle;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0007030 Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RWM6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWN7-1", "uniprot_id": [ { "id": "P2C32_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWN7", "type": "external" } ], "mass": 95571.0, "length": 856, "protein_name": "Protein phosphatase 2C 32", "gene_name": "POL", "organism": "Arabidopsis", "refseq_name": "Protein phosphatase 2C family protein", "refseq_ac": [ { "id": "NP_001325391", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325391", "type": "external" } ], "gene_names_uniprotkb": "POL; F14M4.25", "gene_names_refseq": "F14M4.25; POL; poltergeist", "protein_names_uniprotkb": "Protein phosphatase 2C 32; 3.1.3.16; AtPP2C32; PP2C POL; Protein POLTERGEIST; Protein phosphatase 2C POL", "protein_names_refseq": "Protein phosphatase 2C family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46920)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;10725242;12573213;14506206;14593172;15308754;16112663;17079273;17317660;19021904;25561503;27862469;30833711", "class_list": "", "function": "Involved in the regulation of pedicel length and of CLAVATA pathways controlling stem cell identity at shoot and flower meristems., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80732", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0005543 phospholipid binding;GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0006355 regulation of DNA-templated transcription;GO:0010074 maintenance of meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8RWN7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWN9-1", "uniprot_id": [ { "id": "ODP22_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWN9", "type": "external" } ], "mass": 58468.0, "length": 539, "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "MDC16.5", "organism": "Arabidopsis", "refseq_name": "Dihydrolipoamide acetyltransferase, long form protein", "refseq_ac": [ { "id": "NP_566470", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566470", "type": "external" } ], "gene_names_uniprotkb": "MDC16.5", "gene_names_refseq": "", "protein_names_uniprotkb": "Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial; 2.3.1.12; Dihydrolipoamide S-acetyltransferase component 2 of pyruvate dehydrogenase complex; PDC-E2 2; PDCE2 2; Pyruvate dehydrogenase complex component E2 2", "protein_names_refseq": "Dihydrolipoamide acetyltransferase, long form protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13930)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10819329;14593172;14671022;14764908;18463617;20466843;23111157;25732537;27862469", "class_list": "", "function": "The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ASS8;Q9LVK7", "ec_number_list": [ { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" }, { "id": "2.3.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.12", "type": "external" } ], "go_molecular_function": "GO:0005507 copper ion binding;GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005829 cytosol;GO:0045254 pyruvate dehydrogenase complex;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006086 pyruvate decarboxylation to acetyl-CoA", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RWN9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWS0-1", "uniprot_id": [ { "id": "EEN_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWS0", "type": "external" } ], "mass": 14322.0, "length": 124, "protein_name": "Protein EIN6 ENHANCER", "gene_name": "EEN", "organism": "Arabidopsis", "refseq_name": "chromatin-remodeling complex subunit", "refseq_ac": [ { "id": "NP_849518", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849518", "type": "external" } ], "gene_names_uniprotkb": "EEN; F20M13; F22I13", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein EIN6 ENHANCER; Protein ENHANCER OF ETHYLENE INSENSITIVITY 6", "protein_names_refseq": "chromatin-remodeling complex subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38495)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11910074;14593172;27862469;31418686", "class_list": "", "function": "Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair (By similarity). Together with REF6/EIN6, involved in the epigenetic chromatin-dependent regulatory mechanism that monitors the expression of the essential multifunctional plant stress regulator EIN2 via H3K27me3 repressive histone demethylation and histone variant H2A.Z eviction, thus modulating responses to ethylene (ET), especially during embryogenesis (PubMed:31418686). The INO80 complex controls ethylene-induced H2A.Z eviction dynamics (PubMed:31418686)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0031011 Ino80 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8RWS0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWS1-1", "uniprot_id": [ { "id": "ORS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWS1", "type": "external" } ], "mass": 9628.0, "length": 88, "protein_name": "Protein ORGAN SIZE RELATED 1", "gene_name": "OSR1", "organism": "Arabidopsis", "refseq_name": "ORGAN SIZE-like protein", "refseq_ac": [ { "id": "NP_850348", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850348", "type": "external" } ], "gene_names_uniprotkb": "OSR1; F13H10.22", "gene_names_refseq": "F13H10.22; F13H10_22; ORGAN SIZE RELATED 1; ORS1; OSR1", "protein_names_uniprotkb": "Protein ORGAN SIZE RELATED 1", "protein_names_refseq": "ORGAN SIZE-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41230)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;14593172;21457262;27862469", "class_list": "", "function": "Together with ARGOS and ARL, regulates organ growth and final organ size. Promotes both cell expansion and proliferation-dependent organ growth, in an ANT-dependent manner., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZVB4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0001558 regulation of cell growth;GO:0046622 positive regulation of organ growth;GO:0051302 regulation of cell division;GO:0010104 regulation of ethylene-activated signaling pathway;GO:0071215 cellular response to abscisic acid stimulus", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8RWS1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWS4-1", "uniprot_id": [ { "id": "BYST_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWS4", "type": "external" } ], "mass": 51473.0, "length": 444, "protein_name": "Bystin", "gene_name": "ENP1", "organism": "Arabidopsis", "refseq_name": "bystin-like protein", "refseq_ac": [ { "id": "NP_174447", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174447", "type": "external" } ], "gene_names_uniprotkb": "ENP1; F27M3.14", "gene_names_refseq": "ENP1; Essential Nuclear Protein 1; F27M3.14; F27M3_14; atENP1", "protein_names_uniprotkb": "Bystin; AtEnp1; Essential nuclear protein 1", "protein_names_refseq": "bystin-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31660)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;23382868;27862469", "class_list": "", "function": "Essential protein required during embryogenesis and pollen development (PubMed:23382868). Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits (PubMed:23382868)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6V6", "ec_number_list": [], "go_molecular_function": "GO:0030515 snoRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0030688 preribosome, small subunit precursor", "go_biological_process": "GO:0006364 rRNA processing;GO:0009553 embryo sac development;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8RWS4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWS9-1", "uniprot_id": [ { "id": "CNGC5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWS9", "type": "external" } ], "mass": 81969.0, "length": 717, "protein_name": "Probable cyclic nucleotide-gated ion channel 5", "gene_name": "CNGC5", "organism": "Arabidopsis", "refseq_name": "cyclic nucleotide gated channel 5", "refseq_ac": [ { "id": "NP_200602", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200602", "type": "external" } ], "gene_names_uniprotkb": "CNGC5; MTI20.20", "gene_names_refseq": "ATCNGC5; CNGC5; MTI20.20; MTI20_20; cyclic nucleotide gated channel 5", "protein_names_uniprotkb": "Probable cyclic nucleotide-gated ion channel 5; AtCNGC5; Cyclic nucleotide- and calmodulin-regulated ion channel 5", "protein_names_refseq": "cyclic nucleotide gated channel 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57940)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10341447;11500563;14593172;27862469;9734815", "class_list": "", "function": "Probable cyclic nucleotide-gated ion channel., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9XFS3", "ec_number_list": [], "go_molecular_function": "GO:0005262 calcium channel activity;GO:0005516 calmodulin binding;GO:0005223 intracellularly cGMP-activated cation channel activity;GO:0030552 cAMP binding;GO:0030553 cGMP binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0035618 root hair", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8RWS9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWU4-1", "uniprot_id": [ { "id": "ATML1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWU4", "type": "external" } ], "mass": 83490.0, "length": 762, "protein_name": "Homeobox-leucine zipper protein MERISTEM L1", "gene_name": "ATML1", "organism": "Arabidopsis", "refseq_name": "Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein", "refseq_ac": [ { "id": "NP_001031692", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031692", "type": "external" } ], "gene_names_uniprotkb": "ATML1; F17L22.210", "gene_names_refseq": "ATML1; F17L22.210; F17L22_210; MERISTEM LAYER 1", "protein_names_uniprotkb": "Homeobox-leucine zipper protein MERISTEM L1; HD-ZIP protein ATML1; Homeodomain transcription factor ATML1", "protein_names_refseq": "Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21750)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10571886;10617198;10809443;11439135;12505995;14593172;16778018;23111157;23572148;23660473;24989044;25561503;25564655;26091701;27862469;29654922;8989876", "class_list": "", "function": "Probable transcription factor involved in cell specification and pattern formation during embryogenesis. Binds to the L1 box DNA sequence 5'-TAAATG[CT]A-3'. Plays a role in maintaining the identity of L1 cells, possibly by interacting with their L1 box or other target-gene promoters; binds to the LIP1 gene promoter and stimulates its expression upon imbibition (PubMed:24989044). Acts as a positive regulator of gibberellins (GAs)-regulated epidermal gene expression (e.g. LIP1, LIP2, LTP1, FDH and PDF1) (PubMed:24989044). Functionally redundant to PDF2 (PubMed:24989044). Seems to promote cell differentiation (PubMed:25564655)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38887;Q9SVS2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008289 lipid binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0009845 seed germination;GO:0010029 regulation of seed germination;GO:0048825 cotyledon development", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8RWU4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWU6-1", "uniprot_id": [ { "id": "NHX6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWU6", "type": "external" } ], "mass": 59314.0, "length": 535, "protein_name": "Sodium/hydrogen exchanger 6", "gene_name": "NHX6", "organism": "Arabidopsis", "refseq_name": "Na+/H+ antiporter 6", "refseq_ac": [ { "id": "NP_178079", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178079", "type": "external" } ], "gene_names_uniprotkb": "NHX6; F20B17.4", "gene_names_refseq": "ARABIDOPSIS NA+/H+ ANTIPORTER 6; ATNHX6; F20B17.4; F20B17_4; NHX6; Na+/H+ antiporter 6", "protein_names_uniprotkb": "Sodium/hydrogen exchanger 6; NHE-6; Na(+)/H(+) exchanger 6", "protein_names_refseq": "Na+/H+ antiporter 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79610)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;12047628;14593172;18463617;19245862;20466843;21278129;27862469;30833711", "class_list": "", "function": "Involved in trafficking to the vacuole (PubMed:21278129). Required for cell proliferation and cell expansion, but not for cell differentiation (PubMed:21278129). Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes (By similarity). May also exchange Li(+) and Cs(+) with a lower affinity (By similarity)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8S395;Q9MA14", "ec_number_list": [], "go_molecular_function": "GO:0015385 sodium:proton antiporter activity;GO:0015386 potassium:proton antiporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005886 plasma membrane;GO:0010008 endosome membrane;GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0051453 regulation of intracellular pH;GO:0071805 potassium ion transmembrane transport;GO:0098719 sodium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RWU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWW0-1", "uniprot_id": [ { "id": "ALE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWW0", "type": "external" } ], "mass": 81633.0, "length": 744, "protein_name": "Receptor-like serine/threonine-protein kinase ALE2", "gene_name": "ALE2", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_849998", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849998", "type": "external" } ], "gene_names_uniprotkb": "ALE2; F11A3.15", "gene_names_refseq": "ALE2; Abnormal Leaf Shape 2; F11A3.15; F11A3_15", "protein_names_uniprotkb": "Receptor-like serine/threonine-protein kinase ALE2; 2.7.11.1; Protein ABNORMAL LEAF SHAPE 2", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20300)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;17317660;17376810;25561503;27862469;28011693", "class_list": "", "function": "Required during the differentiation of the protoderm into shoots epidermis and cuticle., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 5, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q9SK72", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "GO:0030154 cell differentiation;GO:0046777 protein autophosphorylation;GO:0010068 protoderm histogenesis;GO:0090558 plant epidermis development;GO:1905393 plant organ formation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RWW0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWX4-1", "uniprot_id": [ { "id": "KOC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWX4", "type": "external" } ], "mass": 68157.0, "length": 611, "protein_name": "Protein KINASE OF THE OUTER CHLOROPLAST MEMBRANE 1", "gene_name": "KOC1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001031769", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031769", "type": "external" } ], "gene_names_uniprotkb": "KOC1; F10M6.110", "gene_names_refseq": "F10M6.110; F10M6_110", "protein_names_uniprotkb": "Protein KINASE OF THE OUTER CHLOROPLAST MEMBRANE 1; 2.7.11.1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32250)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;18463617;20466843;27862469;28283569", "class_list": "", "function": "Serine/threonine protein kinase acting as a regulatory component of the plastid protein import machinery by phosphorylating import receptors (e.g. the A-domain of TOC159, TOC120 and TOC132) (PubMed:28283569). Supports preprotein import and contributes to efficient chloroplast biogenesis, thus being required for survival during de-etiolation (PubMed:28283569)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49365", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0009704 de-etiolation;GO:0045036 protein targeting to chloroplast;GO:1904216 positive regulation of protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RWX4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWY6-1", "uniprot_id": [ { "id": "CLASP_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWY6", "type": "external" } ], "mass": 158951.0, "length": 1439, "protein_name": "CLIP-associated protein", "gene_name": "CLASP", "organism": "Arabidopsis", "refseq_name": "CLIP-associated protein", "refseq_ac": [ { "id": "NP_849997", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849997", "type": "external" } ], "gene_names_uniprotkb": "CLASP; F11A3.25", "gene_names_refseq": "ATCLASP; CLASP; CLIP-ASSOCIATED PROTEIN; CLIP-associated protein; T2G17.1; T2G17_1", "protein_names_uniprotkb": "CLIP-associated protein; AtCLASP", "protein_names_refseq": "CLIP-associated protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20190)", "pathway_count": 1, "publication_count": 26, "publication_id_list": "10617197;14593172;17272265;17317660;17873093;18042620;18463617;18716054;19341826;19376835;20466843;21847104;22223895;22500804;23111157;23328941;23572148;23660473;23776212;25561503;26091701;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Cortical microtubule plus-end tracking protein required for cell morphogenesis and cell division. Promotes the stabilization of dynamic microtubules during mitosis. Regulates microtubule-cortex attachment, thereby contributing to self-organization of cortical microtubules and subsequent cell shape., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 31, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WVK2;Q9SK81;Q9SL62", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding;GO:0051010 microtubule plus-end binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005938 cell cortex;GO:0005876 spindle microtubule;GO:0005881 cytoplasmic microtubule", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0051301 cell division;GO:0050821 protein stabilization;GO:0051781 positive regulation of cell division;GO:0007026 negative regulation of microtubule depolymerization", "synthesized_glycan_count": 0, "hit_score": 2.7, "record_id": "Q8RWY6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWZ5-1", "uniprot_id": [ { "id": "SD25_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWZ5", "type": "external" } ], "mass": 89740.0, "length": 821, "protein_name": "G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5", "gene_name": "SD25", "organism": "Arabidopsis", "refseq_name": "S-domain-2 5", "refseq_ac": [ { "id": "NP_194957", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194957", "type": "external" } ], "gene_names_uniprotkb": "SD25; F10M6.60; F8B4.10", "gene_names_refseq": "F10M6.60; F10M6_60; S-domain-2 5; SD2-5", "protein_names_uniprotkb": "G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5; 2.7.11.1; S-domain-2 (SD2) receptor kinase 5; SD2-5", "protein_names_refseq": "S-domain-2 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32300)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;18552232;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "O49361", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0031625 ubiquitin protein ligase binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "GO:0046777 protein autophosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8RWZ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWZ7-1", "uniprot_id": [ { "id": "VHAA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWZ7", "type": "external" } ], "mass": 93415.0, "length": 817, "protein_name": "V-type proton ATPase subunit a1", "gene_name": "VHA-a1", "organism": "Arabidopsis", "refseq_name": "vacuolar proton ATPase A1", "refseq_ac": [ { "id": "NP_850122", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850122", "type": "external" } ], "gene_names_uniprotkb": "VHA-a1; T17D12.8", "gene_names_refseq": "T17D12.8; T17D12_8; VHA-A1; vacuolar proton ATPase A1", "protein_names_uniprotkb": "V-type proton ATPase subunit a1; V-ATPase 95 kDa isoform a1; V-ATPase subunit a1; V-type proton ATPase 95 kDa subunit a isoform 1; Vacuolar H(+)-ATPase subunit a isoform 1; Vacuolar proton pump subunit a1; Vacuolar proton translocating ATPase 95 kDa subunit a isoform 1", "protein_names_refseq": "vacuolar proton ATPase A1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28520)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;11950611;14593172;16461582;17376158;18239134;18441211;19376932;21512130;23832588;27862469", "class_list": "", "function": "Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. Required during cell expansion., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WM70;Q9SK06", "ec_number_list": [], "go_molecular_function": "GO:0051117 ATPase binding;GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0012510 trans-Golgi network transport vesicle membrane;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0032588 trans-Golgi network membrane", "go_biological_process": "GO:0007035 vacuolar acidification;GO:0070070 proton-transporting V-type ATPase complex assembly", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8RWZ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX26-1", "uniprot_id": [ { "id": "RGLG3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX26", "type": "external" } ], "mass": 41189.0, "length": 367, "protein_name": "E3 ubiquitin-protein ligase RGLG3", "gene_name": "RGLG3", "organism": "Arabidopsis", "refseq_name": "Copine (Calcium-dependent phospholipid-binding protein) family", "refseq_ac": [ { "id": "NP_001032132", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032132", "type": "external" } ], "gene_names_uniprotkb": "RGLG3", "gene_names_refseq": "MBM17.7; MBM17_7; RGLG3; RING DOMAIN LIGASE 3", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RGLG3; 2.3.2.27; RING domain ligase 3", "protein_names_refseq": "Copine (Calcium-dependent phospholipid-binding protein) family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63970)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10718197;14593172;22898498;25035403;25788731;27497447;27862469", "class_list": "", "function": "Possesses E3 ubiquitin-protein ligase in vitro. Acts as upstream modulator of jasmonate (JA) signaling in response to various stimuli, such as JA-inhibited root growth, JA-inductive gene expression, coronatine-mediated pathogen susceptibility, wound-stimulated expression of JA-responsive genes and wound-induced JA biosynthesis (PubMed:22898498). Controls fumonisin B1 (FB1)-triggered programmed cell death (PCD) by modulating the JA signaling pathway. May mediate salicylic acid (SA) suppression of JA signaling in FB1-induced responses (PubMed:25788731). May mediate the formation of 'Lys-48'-linked multiubiquitin chains. Mediates the polyubiquitination and subsequent proteasomal degradation of the target protein GRXS17 (PubMed:27497447)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LVN6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0009611 response to wounding;GO:0016567 protein ubiquitination;GO:0042742 defense response to bacterium;GO:0009867 jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RX26-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX55-1", "uniprot_id": [ { "id": "B3GTI_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX55", "type": "external" } ], "mass": 77348.0, "length": 672, "protein_name": "Hydroxyproline O-galactosyltransferase GALT5", "gene_name": "GALT5", "organism": "Arabidopsis", "refseq_name": "Galactosyltransferase family protein", "refseq_ac": [ { "id": "NP_177618", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177618", "type": "external" } ], "gene_names_uniprotkb": "GALT5; B3GALT18; F25A4.23", "gene_names_refseq": "F25A4.23; F25A4_23", "protein_names_uniprotkb": "Hydroxyproline O-galactosyltransferase GALT5; 2.4.1.-; AtGALT5; Beta-1,3-galactosyltransferase 18", "protein_names_refseq": "Galactosyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G74800)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;17630273;18548197;24905498;25974423;26690932;26731606;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Possesses hydroxyproline O-galactosyltransferase activity. Transfers galactose from UDP-galactose to hydroxyproline residues in the arabinogalactan proteins (AGPs). Is specific for AGPs containing non-contiguous peptidyl hydroxyproline residues. Utilizes UDP-galactose solely as sugar donor. The addition of galactose onto the peptidyl hydroxyproline residues in AGP core proteins represents the first committed step in arabinogalactan polysaccharide addition. AGP glycans play essential roles in both vegetative and reproductive plant growth., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9SSG4;W8QP19", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding;GO:1990714 hydroxyproline O-galactosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0010208 pollen wall assembly;GO:0010405 arabinogalactan protein metabolic process;GO:0080147 root hair cell development;GO:0180062 protein O-linked glycosylation via galactose", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RX55-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX71-1", "uniprot_id": [ { "id": "BAG4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX71", "type": "external" } ], "mass": 29211.0, "length": 269, "protein_name": "BAG family molecular chaperone regulator 4", "gene_name": "BAG4", "organism": "Arabidopsis", "refseq_name": "BCL-2-associated athanogene 4", "refseq_ac": [ { "id": "NP_190746", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190746", "type": "external" } ], "gene_names_uniprotkb": "BAG4; ATEM1.3", "gene_names_refseq": "ATBAG4; BAG4; BCL-2-associated athanogene 4", "protein_names_uniprotkb": "BAG family molecular chaperone regulator 4; Bcl-2-associated athanogene 4", "protein_names_refseq": "BCL-2-associated athanogene 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51780)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10645728;14593172;16636050;27862469", "class_list": "", "function": "Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65021;Q8LDA0", "ec_number_list": [], "go_molecular_function": "GO:0051087 protein-folding chaperone binding;GO:0000774 adenyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0070971 endoplasmic reticulum exit site", "go_biological_process": "GO:0009409 response to cold;GO:0006612 protein targeting to membrane;GO:0043268 positive regulation of potassium ion transport;GO:0050821 protein stabilization;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8RX71-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX77-1", "uniprot_id": [ { "id": "PTR21_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX77", "type": "external" } ], "mass": 68417.0, "length": 620, "protein_name": "Protein NRT1/ PTR FAMILY 2.13", "gene_name": "NPF2.13", "organism": "Arabidopsis", "refseq_name": "nitrate transporter 1.7", "refseq_ac": [ { "id": "NP_564979", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564979", "type": "external" } ], "gene_names_uniprotkb": "NPF2.13; NRT1.7; T17F3.10", "gene_names_refseq": "AtNPF2.13; NPF2.13; NRT1.7; NRT1/ PTR family 2.13; T17F3.10; T17F3_10; nitrate transporter 1.7", "protein_names_uniprotkb": "Protein NRT1/ PTR FAMILY 2.13; AtNPF2.13; Nitrate transporter 1.7", "protein_names_refseq": "nitrate transporter 1.7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69870)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "11130712;14593172;15308754;17481610;17651370;19376835;19734434;20501909;21768351;22060019;22864417;23111157;24055139;25561503;26091701;27862469;28032637", "class_list": "", "function": "Low-affinity proton-dependent nitrate transporter. Not involved in dipeptides transport, but has a weak glucosinolate transport activity. Involved in phloem loading and nitrate remobilization from the older leaves to other tissues., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAS0", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0015293 symporter activity;GO:0080054 low-affinity nitrate transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0055085 transmembrane transport;GO:0042128 nitrate assimilation;GO:0015706 nitrate transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8RX77-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX79-1", "uniprot_id": [ { "id": "APG3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX79", "type": "external" } ], "mass": 47529.0, "length": 422, "protein_name": "Peptide chain release factor APG3, chloroplastic", "gene_name": "APG3", "organism": "Arabidopsis", "refseq_name": "Peptide chain release factor 1", "refseq_ac": [ { "id": "NP_191850", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191850", "type": "external" } ], "gene_names_uniprotkb": "APG3; RF1; T20O10.10", "gene_names_refseq": "ALBINO AND PALE GREEN; APG3; Arabidopsis thaliana chloroplast RF1; AtcpRF1; chloroplast ribosome release factor 1; cpRF1", "protein_names_uniprotkb": "Peptide chain release factor APG3, chloroplastic; AtcpRF1; Chloroplast ribosome release factor 1; Protein ALBINO AND PALE GREEN 3", "protein_names_refseq": "Peptide chain release factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G62910)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;17450416;24793022;25561503;27862469", "class_list": "", "function": "May direct the termination of translation in response to the peptide chain termination codon UAG. Required for normal chloroplast development and plays essential roles in the termination of translation in plastids., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LYD0", "ec_number_list": [], "go_molecular_function": "GO:0003747 translation release factor activity;GO:0016149 translation release factor activity, codon specific", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0006415 translational termination;GO:0009658 chloroplast organization;GO:0010027 thylakoid membrane organization;GO:0032544 plastid translation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RX79-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX86-1", "uniprot_id": [ { "id": "AGAL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX86", "type": "external" } ], "mass": 44037.0, "length": 396, "protein_name": "Alpha-galactosidase 2", "gene_name": "AGAL2", "organism": "Arabidopsis", "refseq_name": "alpha-galactosidase 2", "refseq_ac": [ { "id": "NP_001031855", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031855", "type": "external" } ], "gene_names_uniprotkb": "AGAL2; F8L15.100", "gene_names_refseq": "AGAL2; AtAGAL2; F8L15.100; F8L15_100; alpha-galactosidase 2", "protein_names_uniprotkb": "Alpha-galactosidase 2; 3.2.1.22; Alpha-D-galactoside galactohydrolase 2; AtAGAL2; Melibiase", "protein_names_refseq": "alpha-galactosidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08370)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;15034167;16845526;19423640;22060019;22363647;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "May regulate leaf (and possibly other organ) development by functioning in cell wall loosening and cell wall expansion., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "B9DGL8;Q9FT98", "ec_number_list": [], "go_molecular_function": "GO:0004557 alpha-galactosidase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0009505 plant-type cell wall;GO:0048046 apoplast", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0009620 response to fungus;GO:0071555 cell wall organization;GO:0009911 positive regulation of flower development;GO:0009965 leaf morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8RX86-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXD4-1", "uniprot_id": [ { "id": "BRCA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXD4", "type": "external" } ], "mass": 103922.0, "length": 941, "protein_name": "Protein BREAST CANCER SUSCEPTIBILITY 1 homolog", "gene_name": "BRCA1", "organism": "Arabidopsis", "refseq_name": "breast cancer susceptibility1", "refseq_ac": [ { "id": "NP_193839", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193839", "type": "external" } ], "gene_names_uniprotkb": "BRCA1; T13K14.230", "gene_names_refseq": "ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1; ATBRCA1; BRCA1; breast cancer susceptibility1", "protein_names_uniprotkb": "Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; AtBRCA1", "protein_names_refseq": "breast cancer susceptibility1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21070)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;12582233;14593172;16957774;22629260;27862469", "class_list": "", "function": "Plays a role in DNA repair and in cell-cycle control. Required for the repair of DNA double-strand breaks (DSBs), both natural and induced by genotoxic stress, by homologous recombination (HR)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SUA7", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0070531 BRCA1-A complex;GO:0031436 BRCA1-BARD1 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0010332 response to gamma radiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0000724 double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RXD4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXD5-1", "uniprot_id": [ { "id": "KTI4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXD5", "type": "external" } ], "mass": 23793.0, "length": 215, "protein_name": "Kunitz trypsin inhibitor 4", "gene_name": "KTI4", "organism": "Arabidopsis", "refseq_name": "kunitz trypsin inhibitor 1", "refseq_ac": [ { "id": "NP_565061", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565061", "type": "external" } ], "gene_names_uniprotkb": "KTI4; KTI1; T18K17.7; TPI", "gene_names_refseq": "ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1; ATKTI1; KTI1; T18K17.7; T18K17_7; kunitz trypsin inhibitor 1", "protein_names_uniprotkb": "Kunitz trypsin inhibitor 4; AtKTI1; AtKTI4; Kunitz trypsin inhibitor 1; Trypsin protease inhibitor", "protein_names_refseq": "kunitz trypsin inhibitor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G73260)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;16236154;17142483;19825555;27862469;30042779", "class_list": "", "function": "Exhibits Kunitz trypsin protease inhibitor activity (PubMed:19825555). Involved in modulating programmed cell death (PCD) in plant-pathogen interactions (PubMed:19825555). Can inhibit both serine proteases and cysteine proteases (PubMed:30042779). May be involved in the modulation of the proteases that participate in the hydrolysis of dietary proteins in the gut of spider mites (PubMed:30042779)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8H190;Q93Y29;Q9CAT9", "ec_number_list": [], "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity;GO:0004866 endopeptidase inhibitor activity;GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0042542 response to hydrogen peroxide;GO:0009611 response to wounding;GO:0042742 defense response to bacterium;GO:0002237 response to molecule of bacterial origin;GO:0002238 response to molecule of fungal origin", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RXD5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXD9-1", "uniprot_id": [ { "id": "DPE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXD9", "type": "external" } ], "mass": 109777.0, "length": 955, "protein_name": "4-alpha-glucanotransferase DPE2", "gene_name": "DPE2", "organism": "Arabidopsis", "refseq_name": "disproportionating enzyme 2", "refseq_ac": [ { "id": "NP_181616", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181616", "type": "external" } ], "gene_names_uniprotkb": "DPE2; T20B5.4", "gene_names_refseq": "DPE2; T20B5.4; T20B5_4; disproportionating enzyme 2", "protein_names_uniprotkb": "4-alpha-glucanotransferase DPE2; 2.4.1.25; Amylomaltase; D-enzyme; Disproportionating enzyme; Protein DISPROPORTIONATING ENZYME 2", "protein_names_refseq": "disproportionating enzyme 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40840)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;14593172;14593480;14996213;15665241;16055686;16596410;16640603;17028209;17272265;20700743;21242321;21269731;22060019;22223895;25561503;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Cytosolic alpha-glucanotransferase essential for the cytosolic metabolism of maltose, an intermediate on the pathway by which starch is converted to sucrose in leaves at night. Metabolizes maltose exported from the chloroplast and is specific for beta-maltose. May play a role in freezing tolerance. Temperature drop induces inactivation of DPE2 that leads to rapid accumulation of maltose, a solute that protects cells from freezing damage., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22198", "ec_number_list": [], "go_molecular_function": "GO:0004134 4-alpha-glucanotransferase activity;GO:2001070 starch binding;GO:0010297 heteropolysaccharide binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0005983 starch catabolic process;GO:0005976 polysaccharide metabolic process;GO:0000023 maltose metabolic process;GO:0000025 maltose catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8RXD9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXF8-1", "uniprot_id": [ { "id": "MIRO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXF8", "type": "external" } ], "mass": 72322.0, "length": 648, "protein_name": "Mitochondrial Rho GTPase 1", "gene_name": "MIRO1", "organism": "Arabidopsis", "refseq_name": "MIRO-related GTP-ase 1", "refseq_ac": [ { "id": "NP_001031953", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031953", "type": "external" } ], "gene_names_uniprotkb": "MIRO1", "gene_names_refseq": "F21A20.250; F21A20_250; MIRO-related GTP-ase 1; MIRO1; emb2473; embryo defective 2473", "protein_names_uniprotkb": "Mitochondrial Rho GTPase 1; 3.6.5.-; AtMIRO1; Miro-related GTPase 1", "protein_names_refseq": "MIRO-related GTP-ase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G27540)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130714;14593172;17272265;18344283;18463617;19376835;20466843;20931334;21494602;21768351;23111157;23328941;25561503;27532006;27862469;28011693", "class_list": "", "function": "Mitochondrial GTPase required to maintain proper development, morphology and intracellular distribution of mitochondria, which in turn are essential for the progress of embryonic cell division, development of haploid male and female gametes, and pollen tube growth., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0009536 plastid", "go_biological_process": "GO:0007005 mitochondrion organization;GO:0009793 embryo development ending in seed dormancy;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8RXF8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXK6-1", "uniprot_id": [ { "id": "RH8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXK6", "type": "external" } ], "mass": 57687.0, "length": 505, "protein_name": "DEAD-box ATP-dependent RNA helicase 8", "gene_name": "RH8", "organism": "Arabidopsis", "refseq_name": "RNAhelicase-like 8", "refseq_ac": [ { "id": "NP_191975", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191975", "type": "external" } ], "gene_names_uniprotkb": "RH8; F6N23.6", "gene_names_refseq": "ATRH8; F6N23.6; F6N23_6; RH8; RNAhelicase-like 8", "protein_names_uniprotkb": "DEAD-box ATP-dependent RNA helicase 8; 3.6.4.13", "protein_names_refseq": "RNAhelicase-like 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00660)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;17168887;24265739;27862469;9862990", "class_list": "", "function": "ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65275;Q9ZS12", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0043657 host cell;GO:0000932 P-body;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0019060 intracellular transport of viral protein in host cell;GO:0006397 mRNA processing;GO:0016032 viral process;GO:0017148 negative regulation of translation;GO:0033962 P-body assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RXK6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXK7-1", "uniprot_id": [ { "id": "PME41_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXK7", "type": "external" } ], "mass": 63944.0, "length": 573, "protein_name": "Probable pectinesterase/pectinesterase inhibitor 41", "gene_name": "PME41", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PME41; ARATH41; T14P8.14", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable pectinesterase/pectinesterase inhibitor 41; AtPME41; AtPMEpcrB; Pectin methylesterase 41; Pectin methylesterase inhibitor 41", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02330)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;15337457;16622707;27862469;9767082", "class_list": "", "function": "Acts in the modification of cell walls via demethylesterification of cell wall pectin., [UniProtKB]", "predicted_glycosites": 13, "predicted_n_glycosites": 13, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "O49008;O81300", "ec_number_list": [ { "id": "3.1.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.11", "type": "external" }, { "id": "3.2.2.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.22", "type": "external" } ], "go_molecular_function": "GO:0030599 pectinesterase activity;GO:0046910 pectinesterase inhibitor activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0009409 response to cold;GO:0009620 response to fungus;GO:0050832 defense response to fungus;GO:0009741 response to brassinosteroid;GO:0045490 pectin catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RXK7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXN0-1", "uniprot_id": [ { "id": "AB11G_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXN0", "type": "external" } ], "mass": 78413.0, "length": 703, "protein_name": "ABC transporter G family member 11", "gene_name": "ABCG11", "organism": "Arabidopsis", "refseq_name": "white-brown complex-like protein", "refseq_ac": [ { "id": "NP_173226", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173226", "type": "external" } ], "gene_names_uniprotkb": "ABCG11; COF1; DSO; F2H15.7; PEL1; WBC11", "gene_names_refseq": "ABCG11; ARABIDOPSIS THALIANA WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11; ATP-binding cassette G11; ATWBC11; AtABCG11; COF1; CUTICULAR DEFECT AND ORGAN FUSION 1; DESPERADO; DSO; F2H15.7; F2H15_7; WBC11; white-brown complex homolog protein 11", "protein_names_uniprotkb": "ABC transporter G family member 11; ABC transporter ABCG.11; AtABCG11; AtWBC11; Protein CUTICULAR DEFECT AND ORGAN FUSION 1; Protein DESPERADO; Protein PERMEABLE LEAVES 1; White-brown complex homolog protein 11", "protein_names_refseq": "white-brown complex-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17840)", "pathway_count": 1, "publication_count": 26, "publication_id_list": "11130712;11346655;14593172;14675439;14730060;17317660;17727615;17951461;17971336;17989085;18299247;19376835;20035035;20870961;21838868;22060019;23111157;23572148;23660473;24112720;25561503;26091701;27247031;27862469;28011693;28921082", "class_list": "", "function": "Required for the cuticle, root suberin and pollen coat development by controlling cutin and maybe wax transport to the extracellular matrix (PubMed:20035035, PubMed:24112720). Involved in developmental plasticity and stress responses. Together with ABCG9 and ABCG14, required for vascular development by regulating lipid/sterol homeostasis (PubMed:24112720). May be a transporter of lignin precursors during tracheary element differentiation (PubMed:28921082)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9LMU4", "ec_number_list": [], "go_molecular_function": "GO:0015245 fatty acid transmembrane transporter activity;GO:0005524 ATP binding;GO:0042803 protein homodimerization activity;GO:0016887 ATP hydrolysis activity;GO:0015562 efflux transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0042335 cuticle development;GO:0055085 transmembrane transport;GO:0009611 response to wounding;GO:0015908 fatty acid transport;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 2.7, "record_id": "Q8RXN0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXN3-1", "uniprot_id": [ { "id": "PPT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXN3", "type": "external" } ], "mass": 44224.0, "length": 408, "protein_name": "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic", "gene_name": "PPT1", "organism": "Arabidopsis", "refseq_name": "Glucose-6-phosphate/phosphate translocator-like protein", "refseq_ac": [ { "id": "NP_198317", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198317", "type": "external" } ], "gene_names_uniprotkb": "PPT1; CUE1; F19N2.40", "gene_names_refseq": "ARABIDOPSIS THALIANA PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR; ARAPPT; CAB UNDEREXPRESSED 1; CUE1; F19N2.40; F19N2_40; PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR; PPT", "protein_names_uniprotkb": "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic; AtPPT1; Protein CAB UNDEREXPRESSED 1", "protein_names_refseq": "Glucose-6-phosphate/phosphate translocator-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G33320)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10488230;11130714;12766230;14593172;14617088;14617097;17981875;22223895;25053812;27862469", "class_list": "", "function": "Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP), 2-phosphoglycerate, 3-phosphoglycerate and dihydroxyacetone phosphate. Imports PEP to the chloroplast stroma as one substrate of the shikimate pathway, from which aromatic amino acids and a variety of secondary products derive. Required for correct leaf mesophyll cell development and expression of chlorophyll a/b binding protein 3 (CAB3)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "P92991;Q8LDB3;Q9M669", "ec_number_list": [], "go_molecular_function": "GO:0015120 phosphoglycerate transmembrane transporter activity;GO:0015121 phosphoenolpyruvate:phosphate antiporter activity;GO:0009670 triose-phosphate:phosphate antiporter activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0015713 phosphoglycerate transmembrane transport;GO:0015714 phosphoenolpyruvate transport;GO:0035436 triose phosphate transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8RXN3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXN6-1", "uniprot_id": [ { "id": "PRP31_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXN6", "type": "external" } ], "mass": 52645.0, "length": 485, "protein_name": "U4/U6 small nuclear ribonucleoprotein Prp31 homolog", "gene_name": "PRP31", "organism": "Arabidopsis", "refseq_name": "pre-mRNA processing ribonucleoprotein binding region-containing protein", "refseq_ac": [ { "id": "NP_564754", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564754", "type": "external" } ], "gene_names_uniprotkb": "PRP31; EMB1220; T13D8.6", "gene_names_refseq": "T13D8.6; T13D8_6; emb1220; embryo defective 1220", "protein_names_uniprotkb": "U4/U6 small nuclear ribonucleoprotein Prp31 homolog; Pre-mRNA-processing factor 31 homolog; Protein EMBRYO DEFECTIVE 1220", "protein_names_refseq": "pre-mRNA processing ribonucleoprotein binding region-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60170)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;20466843;25561503;25684655;27862469", "class_list": "", "function": "Involved in pre-mRNA splicing. Required for the assembly of the U4/U5/U6 tri-snRNP complex, one of the building blocks of the spliceosome (By similarity). Functions in association with STA1 and ZOP1 in spliceosome dynamics and pre-mRNA splicing. Required for transcriptional regulation and pre-mRNA splicing of cold-responsive genes, such as LTI78/RD29A, KIN2/COR6.6 or COR15A, especially under cold stress. May play a role in stress response. Involved in transcriptional gene silencing of endogenous transposable elements, independently of the RNA-directed DNA methylation (RdDM) pathway. Seems not to participate in the small RNA biogenesis of the RdDM pathway (PubMed:25684655)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80740", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0015030 Cajal body;GO:0071011 precatalytic spliceosome;GO:0005687 U4 snRNP;GO:0046540 U4/U6 x U5 tri-snRNP complex", "go_biological_process": "GO:0070417 cellular response to cold;GO:0009409 response to cold;GO:0000244 spliceosomal tri-snRNP complex assembly;GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RXN6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXN8-1", "uniprot_id": [ { "id": "NRP_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXN8", "type": "external" } ], "mass": 39784.0, "length": 349, "protein_name": "DCD domain-containing protein NRP", "gene_name": "NRP", "organism": "Arabidopsis", "refseq_name": "DCD (Development and Cell Death) domain protein", "refseq_ac": [ { "id": "NP_568600", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568600", "type": "external" } ], "gene_names_uniprotkb": "NRP; GDL; MJC20.15", "gene_names_refseq": "MJC20.15; MJC20_15", "protein_names_uniprotkb": "DCD domain-containing protein NRP; Asparagine-rich protein; GDA1-like protein; N-rich protein", "protein_names_refseq": "DCD (Development and Cell Death) domain protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42050)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10470850;14593172;16533544;21277785;27862469;28633330;29175650", "class_list": "", "function": "Contributes to the initial phase of responses to abiotic and biotic stress signals (Probable). Binds FYPP3 and facilitates FYPP3 degradation to promote abscisic acid (ABA) response (PubMed:29175650)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FHX9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0071456 cellular response to hypoxia;GO:0034976 response to endoplasmic reticulum stress;GO:0043067 regulation of programmed cell death;GO:1902074 response to salt;GO:1904350 regulation of protein catabolic process in the vacuole", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RXN8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXP7-1", "uniprot_id": [ { "id": "DLDG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXP7", "type": "external" } ], "mass": 51021.0, "length": 438, "protein_name": "Protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic", "gene_name": "DLDG1", "organism": "Arabidopsis", "refseq_name": "CemA-like proton extrusion protein-like protein", "refseq_ac": [ { "id": "NP_567865", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567865", "type": "external" } ], "gene_names_uniprotkb": "DLDG1; At4g31041; F6I18.50", "gene_names_refseq": "F6I18.50; F6I18_50", "protein_names_uniprotkb": "Protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic; Potassium/proton antiporter DLDG1", "protein_names_refseq": "CemA-like proton extrusion protein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31040)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;27862469;31665522;37339934", "class_list": "", "function": "Promotes K(+)/H(+) antiport activity supporting K(+) efflux to control H(+) homeostasis in chloroplasts (PubMed:31665522). Also able to ensure Ca(2+)/H(+) antiport activity in vitro (PubMed:31665522). Essential for chloroplast pH regulation and optimization of non-photochemical quenching (NPQ), a regulatory mechanism that dissipates excess light energy; acts downstream of PSBS but independently from PGR5 and FLAP1 (PubMed:31665522, PubMed:37339934)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65546;Q67YB4;Q67YG9;Q67Z96;Q681Z5;Q8LBP9", "ec_number_list": [], "go_molecular_function": "GO:0015386 potassium:proton antiporter activity;GO:0015093 ferrous iron transmembrane transporter activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0034755 iron ion transmembrane transport;GO:0051453 regulation of intracellular pH;GO:0071805 potassium ion transmembrane transport;GO:1902600 proton transmembrane transport;GO:0010196 nonphotochemical quenching", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8RXP7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXX9-1", "uniprot_id": [ { "id": "ATL6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXX9", "type": "external" } ], "mass": 43274.0, "length": 398, "protein_name": "E3 ubiquitin-protein ligase ATL6", "gene_name": "ATL6", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_566249", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566249", "type": "external" } ], "gene_names_uniprotkb": "ATL6; T12H1.17", "gene_names_refseq": "ATL6; Arabidopsis toxicos en levadura 6; T12H1.17; T12H1_17", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase ATL6; 2.3.2.27; RING-H2 finger protein ATL6; RING-type E3 ubiquitin transferase ATL6", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G05200)", "pathway_count": 1, "publication_count": 30, "publication_id_list": "10480382;11130713;11983057;14506206;14593172;15308754;15644464;16557337;17651370;17722694;18463617;19253305;19376835;20466843;21768351;23111157;23172892;23328941;23572148;23660473;23776212;25561503;26091701;27419465;27862469;28011693;29167316;29654922;30833711;31433471", "class_list": "", "function": "E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8 in vitro. May be involved in the plant C/N response and the early steps of the plant defense signaling pathway., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 17, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4FE31;Q9MA99;Q9XF65", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "GO:0098542 defense response to other organism;GO:0016567 protein ubiquitination;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 3.1, "record_id": "Q8RXX9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY18-1", "uniprot_id": [ { "id": "TRF1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY18", "type": "external" } ], "mass": 117449.0, "length": 1055, "protein_name": "TNF receptor-associated factor homolog 1a", "gene_name": "TRAF1A", "organism": "Arabidopsis", "refseq_name": "TRAF-like superfamily protein", "refseq_ac": [ { "id": "NP_199169", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199169", "type": "external" } ], "gene_names_uniprotkb": "TRAF1A; K9D7.6; MUSE14", "gene_names_refseq": "K9D7.6; K9D7_6", "protein_names_uniprotkb": "TNF receptor-associated factor homolog 1a; MATH domain-containing protein At5g43560; Protein MUTANT SNC1-ENHANCING 14", "protein_names_refseq": "TRAF-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G43560)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10048488;14593172;18463617;18642946;19423640;20466843;21768351;23111157;23172892;23328941;23572148;23776212;25561503;26867179;27862469;28351989;29654922;30833711", "class_list": "", "function": "Functions redundantly with TRAF1B in the regulation of plant immune response. Contributes to the turnover of the nucleotide-binding domain and leucine-rich repeat-containing (NB-LRR) immune receptors SNC1 and RPS2. May associate with an E3 ubiquitin-protein ligase complex, which modulates ubiquitination and subsequent degradation of NB-LRR immune sensors to maintain their homeostasis (PubMed:26867179). Functions redundantly with TRAF1B in the regulation of autophagosome formation. Required for SINAT1- and SINAT2-mediated ubiquitination and destabilization of ATG6. Functions as a molecular adapter that helps to regulate autophagy by modulating ATG6 stability (PubMed:28351989)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG57;Q0WV70;Q9FIY4", "ec_number_list": [], "go_molecular_function": "GO:0043424 protein histidine kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response;GO:1905037 autophagosome organization", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8RY18-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY23-1", "uniprot_id": [ { "id": "NSH3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY23", "type": "external" } ], "mass": 99072.0, "length": 890, "protein_name": "Nucleoside hydrolase 3", "gene_name": "NSH3", "organism": "Arabidopsis", "refseq_name": "inosine-uridine preferring nucleoside hydrolase family protein", "refseq_ac": [ { "id": "NP_001330199", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001330199", "type": "external" } ], "gene_names_uniprotkb": "NSH3; F17K4.110", "gene_names_refseq": "F17K4.110; F17K4_110; NSH3; nucleoside hydrolase 3", "protein_names_uniprotkb": "Nucleoside hydrolase 3; 3.2.2.1; 3.2.2.2; 3.2.2.7; Adenosine nucleosidase; Inosine nucleosidase; Purine nucleosidase", "protein_names_refseq": "inosine-uridine preferring nucleoside hydrolase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18860)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;21235647;26779190;27862469;30833711", "class_list": "", "function": "Extracellular purine-specific hydrolase present in the apoplastic fluid involved in the degradation of extracellular nucleosides, including inosine and adenosine, and which may participate in wound and pathogen responses (e.g. Botrytis cinerea)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 8, "predicted_n_glycosites": 7, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.-", "type": "external" }, { "id": "3.2.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.3", "type": "external" }, { "id": "3.2.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.2", "type": "external" }, { "id": "3.2.2.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.1", "type": "external" }, { "id": "3.2.2.7", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.7", "type": "external" } ], "go_molecular_function": "GO:0047724 inosine nucleosidase activity;GO:0047622 adenosine nucleosidase activity", "go_cellular_component": "GO:0009505 plant-type cell wall;GO:0009507 chloroplast;GO:0048046 apoplast", "go_biological_process": "GO:0006154 adenosine catabolic process;GO:0009611 response to wounding;GO:0006148 inosine catabolic process;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RY23-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY25-1", "uniprot_id": [ { "id": "NU98A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY25", "type": "external" } ], "mass": 106308.0, "length": 1041, "protein_name": "Nuclear pore complex protein NUP98A", "gene_name": "NUP98A", "organism": "Arabidopsis", "refseq_name": "Nucleoporin autopeptidase", "refseq_ac": [ { "id": "NP_001031018", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031018", "type": "external" } ], "gene_names_uniprotkb": "NUP98A; F14N23.29", "gene_names_refseq": "F14N23.29; F14N23_29", "protein_names_uniprotkb": "Nuclear pore complex protein NUP98A; Nucleoporin 98A; Nucleoporin autopeptidase", "protein_names_refseq": "Nucleoporin autopeptidase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10390)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;21189294;23111157;23328941;25561503;27862469;28011693", "class_list": "", "function": "", "predicted_glycosites": 13, "predicted_n_glycosites": 0, "predicted_o_glycosites": 13, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 13, "binding_glycan_count": 0, "secondary_ac_list": "Q9SY83", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0017056 structural constituent of nuclear pore;GO:0008139 nuclear localization sequence binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0031965 nuclear membrane;GO:0044614 nuclear pore cytoplasmic filaments", "go_biological_process": "GO:0006406 mRNA export from nucleus;GO:0000973 post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery;GO:0034398 telomere tethering at nuclear periphery;GO:0006405 RNA export from nucleus;GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8RY25-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY29-1", "uniprot_id": [ { "id": "ADPG2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY29", "type": "external" } ], "mass": 46623.0, "length": 433, "protein_name": "Polygalacturonase ADPG2", "gene_name": "ADPG2", "organism": "Arabidopsis", "refseq_name": "polygalacturonase ADPG2-like protein", "refseq_ac": [ { "id": "NP_850359", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850359", "type": "external" } ], "gene_names_uniprotkb": "ADPG2; PGAZAT; T11A7.5", "gene_names_refseq": "ADPG2; ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2; PGAZAT; T11A7.5; T11A7_5; polygalacturonase abscission zone A. thaliana", "protein_names_uniprotkb": "Polygalacturonase ADPG2; 3.2.1.15; AtADPG2; PG ADPG2; Pectinase ADPG2; Protein ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2", "protein_names_refseq": "polygalacturonase ADPG2-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41850)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11842157;14593172;17010199;17928369;19168715;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22935;Q8H782", "ec_number_list": [], "go_molecular_function": "GO:0004650 polygalacturonase activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0045490 pectin catabolic process;GO:0009830 cell wall modification involved in abscission;GO:0009901 anther dehiscence;GO:0010047 fruit dehiscence;GO:0010227 floral organ abscission", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8RY29-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY95-1", "uniprot_id": [ { "id": "SPL14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY95", "type": "external" } ], "mass": 114814.0, "length": 1035, "protein_name": "Squamosa promoter-binding-like protein 14", "gene_name": "SPL14", "organism": "Arabidopsis", "refseq_name": "squamosa promoter binding protein-like 14", "refseq_ac": [ { "id": "NP_173522", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173522", "type": "external" } ], "gene_names_uniprotkb": "SPL14; F9H16.3; FBR6; SPL1R2", "gene_names_refseq": "ATSPL14; F9H16.3; F9H16_3; FBR6; SPL14; SPL1R2; SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14; squamosa promoter binding protein-like 14", "protein_names_uniprotkb": "Squamosa promoter-binding-like protein 14; Protein FUMONISIN B1-RESISTANT 6; SPL1-related protein 2", "protein_names_refseq": "squamosa promoter binding protein-like 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20980)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10524240;11130712;14593172;15703061;17272265;17317660;25561503;27862469;28011693", "class_list": "", "function": "Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity). May play a role in plant development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SMW6;Q9SMX0;Q9SYN9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0001216 DNA-binding transcription activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8RY95-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S396-1", "uniprot_id": [ { "id": "NHX5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S396", "type": "external" } ], "mass": 57335.0, "length": 521, "protein_name": "Sodium/hydrogen exchanger 5", "gene_name": "NHX5", "organism": "Arabidopsis", "refseq_name": "sodium hydrogen exchanger 5", "refseq_ac": [ { "id": "NP_175839", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175839", "type": "external" } ], "gene_names_uniprotkb": "NHX5; F20D21.19", "gene_names_refseq": "ATNHX5; F20D21.19; F20D21_19; NA+/H+ ANTIPORTER 5; NHX5; sodium hydrogen exchanger 5", "protein_names_uniprotkb": "Sodium/hydrogen exchanger 5; NHE-5; Na(+)/H(+) exchanger 5", "protein_names_refseq": "sodium hydrogen exchanger 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54370)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12047628;21278129;25561503;27862469", "class_list": "", "function": "Involved in trafficking to the vacuole (PubMed:21278129). Required for cell proliferation and cell expansion, but not for cell differentiation (PubMed:21278129). Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes (PubMed:12047628). May also exchange Li(+) and Cs(+) with a lower affinity (By similarity)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWC0;Q9SLJ7", "ec_number_list": [], "go_molecular_function": "GO:0015385 sodium:proton antiporter activity;GO:0015386 potassium:proton antiporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005886 plasma membrane;GO:0010008 endosome membrane;GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0051453 regulation of intracellular pH;GO:0071805 potassium ion transmembrane transport;GO:0098719 sodium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8S396-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S3U9-1", "uniprot_id": [ { "id": "SEC5A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S3U9", "type": "external" } ], "mass": 121902.0, "length": 1090, "protein_name": "Exocyst complex component SEC5A", "gene_name": "SEC5A", "organism": "Arabidopsis", "refseq_name": "exocyst complex component sec5", "refseq_ac": [ { "id": "NP_177811", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177811", "type": "external" } ], "gene_names_uniprotkb": "SEC5A; F7O12.2", "gene_names_refseq": "F7O12.2; F7O12_2; SEC5A; exocyst complex component sec5", "protein_names_uniprotkb": "Exocyst complex component SEC5A; AtSec5a; Exocyst complex component 2", "protein_names_refseq": "exocyst complex component sec5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G76850)", "pathway_count": 1, "publication_count": 34, "publication_id_list": "11130712;11910074;14593172;18433157;18463617;18492870;19245862;19376835;19895414;20374526;20466843;21199889;21768351;23111157;23172892;23328941;23495664;23572148;23660473;23776212;23820729;23944713;24307681;24601666;24924143;25561503;26091701;26187819;27862469;28011693;29167316;29654922;30833711;35249253", "class_list": "", "function": "Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall. Probable component of an exocyst subcomplex specifically involved in autophagy-related, Golgi-independent membrane traffic to the vacuole. Regulates autophagosome formation and autophagy-related Golgi-independent import into the vacuole., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 19, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WL36;Q541W6;Q9C6K6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0070062 extracellular exosome;GO:0000145 exocyst", "go_biological_process": "GO:0006887 exocytosis;GO:0006893 Golgi to plasma membrane transport;GO:0060321 acceptance of pollen", "synthesized_glycan_count": 0, "hit_score": 3.5, "record_id": "Q8S3U9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S403-1", "uniprot_id": [ { "id": "PHO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S403", "type": "external" } ], "mass": 90537.0, "length": 782, "protein_name": "Phosphate transporter PHO1", "gene_name": "PHO1", "organism": "Arabidopsis", "refseq_name": "phosphate 1", "refseq_ac": [ { "id": "NP_188985", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188985", "type": "external" } ], "gene_names_uniprotkb": "PHO1; MLM24.26", "gene_names_refseq": "ARABIDOPSIS PHOSPHATE 1; ATPHO1; PHO1; phosphate 1", "protein_names_uniprotkb": "Phosphate transporter PHO1; AtPHO1; Protein PHO1", "protein_names_refseq": "phosphate 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23430)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;11971143;17461783;18094993;21309867;22449068;22612335;22634761;23111157;23572148;23776212;25733771;26546667;27080106;27862469", "class_list": "", "function": "Inositol polyphosphate sensor that associates with transcription factors to regulate inorganic phosphate (Pi) starvation responses (PubMed:27080106). Probably acts by binding inositol polyphosphate via its SPX domain (PubMed:27080106). Acts as a Pi exporter, mediating efflux of Pi out of cells (PubMed:21309867, PubMed:22449068). Transfers Pi from the epidermal and cortical cells to the root xylem vessels (PubMed:11971143). Involved in the transfer of Pi from roots to shoots (PubMed:11971143, PubMed:17461783). Involved in abscisic acid (ABA) induction of stomatal closure and ABA repression of stomatal opening (PubMed:22612335)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LW54", "ec_number_list": [], "go_molecular_function": "GO:0005315 phosphate transmembrane transporter activity;GO:0000822 inositol hexakisphosphate binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005739 mitochondrion;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006817 phosphate ion transport;GO:0016036 cellular response to phosphate starvation;GO:0030643 intracellular phosphate ion homeostasis;GO:0006799 polyphosphate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8S403-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S4Y1-1", "uniprot_id": [ { "id": "ACCT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S4Y1", "type": "external" } ], "mass": 41412.0, "length": 403, "protein_name": "Acetyl-CoA acetyltransferase 2", "gene_name": "ACCT2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ACCT2; AAT1; EMB1276; MIF21.12", "gene_names_refseq": "", "protein_names_uniprotkb": "Acetyl-CoA acetyltransferase 2; 2.3.1.9; Acetoacetyl-CoA thiolase 2; Protein EMBRYO DEFECTIVE 1276; Thiolase 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48230)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10718197;14593172;15266054;17120136;17951448;22332816;27862469;29654922", "class_list": "", "function": "Catalyzes the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA (PubMed:22332816). Generates the bulk of the acetoacetyl-CoA precursor required for the cytosol-localized, mevalonate-derived isoprenoid biosynthesis (PubMed:22332816). The generated isoprenoids are required for normal growth and development (PubMed:22332816). Essential protein during embryogenesis (PubMed:15266054)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93YW6;Q9LUB1", "ec_number_list": [ { "id": "2.3.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.9", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003985 acetyl-CoA C-acetyltransferase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0016125 sterol metabolic process;GO:0008299 isoprenoid biosynthetic process;GO:0009846 pollen germination;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8S4Y1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8I4-1", "uniprot_id": [ { "id": "EPF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8I4", "type": "external" } ], "mass": 11444.0, "length": 104, "protein_name": "Protein EPIDERMAL PATTERNING FACTOR 1", "gene_name": "EPF1", "organism": "Arabidopsis", "refseq_name": "epidermal patterning factor 1", "refseq_ac": [ { "id": "NP_179684", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179684", "type": "external" } ], "gene_names_uniprotkb": "EPF1; F5H14", "gene_names_refseq": "EPF1; EPIDERMAL PATTERNING FACTOR 1", "protein_names_uniprotkb": "Protein EPIDERMAL PATTERNING FACTOR 1", "protein_names_refseq": "epidermal patterning factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G20875)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;17639078;19435754;22027592;22241782;25043023;27862469", "class_list": "", "function": "Controls stomatal patterning. Regulates asymmetric cell division during guard cell differentiation. Mediates stomatal development inhibition. Not cleaved by the protease CRSP (AC Q9LNU1) (PubMed:25043023). MEPF1: mobile signal controlling stomatal development in a non-cell-autonomous manner (PubMed:22241782). Uses ERL1 as major receptor (PubMed:22241782). May act by competing with somatogen (AC Q9SV72) for the same receptor, TMM (AC Q9SSD1) (PubMed:22027592)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0010052 guard cell differentiation;GO:0010374 stomatal complex development;GO:0010375 stomatal complex patterning;GO:2000122 negative regulation of stomatal complex development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8S8I4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8K8-1", "uniprot_id": [ { "id": "CV_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8K8", "type": "external" } ], "mass": 16218.0, "length": 152, "protein_name": "Protein CHLOROPLAST VESICULATION", "gene_name": "CV", "organism": "Arabidopsis", "refseq_name": "histone deacetylase-like protein", "refseq_ac": [ { "id": "NP_850063", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850063", "type": "external" } ], "gene_names_uniprotkb": "CV; F3N11", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein CHLOROPLAST VESICULATION", "protein_names_refseq": "histone deacetylase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G25625)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;18463617;20466843;25538186;27862469;29659022", "class_list": "", "function": "Triggers stress-induced chloroplast degradation, independently of autophagy and senescence-associated vacuoles (PubMed:25538186). After targeting to the chloroplast, triggers its destabilization and subsequent disassembly, inducing the formation of CV-containing vesicles (CCVs) carrying stromal proteins, envelope membrane proteins, and thylakoid membrane proteins which are released from the chloroplasts and mobilized to the vacuole for proteolysis (PubMed:25538186)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94CB8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0097708 intracellular vesicle;GO:0005773 vacuole;GO:0009535 chloroplast thylakoid membrane;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0009414 response to water deprivation;GO:1902074 response to salt;GO:0009735 response to cytokinin;GO:0010150 leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8S8K8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8S1-1", "uniprot_id": [ { "id": "PEX16_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8S1", "type": "external" } ], "mass": 41611.0, "length": 367, "protein_name": "Peroxisome biogenesis protein 16", "gene_name": "PEX16", "organism": "Arabidopsis", "refseq_name": "shrunken seed protein (SSE1)", "refseq_ac": [ { "id": "NP_566053", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566053", "type": "external" } ], "gene_names_uniprotkb": "PEX16; F17K2.22; SSE1", "gene_names_refseq": "ARABIDOPSIS PEROXIN 16; ATPEX16; F17K2.22; PEROXIN 16; PEX16; SHRUNKEN SEED 1; SSE1; SSE", "protein_names_uniprotkb": "Peroxisome biogenesis protein 16; AtPEX16; AtPex16p; Peroxin-16; Protein SHRUNKEN SEED 1", "protein_names_refseq": "shrunken seed protein (SSE1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45690)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10195899;10617197;15173561;16040658;16896794;17431024;17478547;24510720;25561503;27862469", "class_list": "", "function": "Involved in the formation of peroxisomes, lipid bodies and protein bodies., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q682F3;Q9XEG0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005777 peroxisome;GO:0005778 peroxisomal membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0007031 peroxisome organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8S8S1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8S2-1", "uniprot_id": [ { "id": "LPCT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8S2", "type": "external" } ], "mass": 61022.0, "length": 539, "protein_name": "Lysophospholipid acyltransferase LPEAT2", "gene_name": "LPEAT2", "organism": "Arabidopsis", "refseq_name": "calcineurin B subunit-like protein", "refseq_ac": [ { "id": "NP_566051", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566051", "type": "external" } ], "gene_names_uniprotkb": "LPEAT2; F17K2.20", "gene_names_refseq": "F17K2.20", "protein_names_uniprotkb": "Lysophospholipid acyltransferase LPEAT2; 2.3.1.23; 2.3.1.n6; 2.3.1.n7; AtLPEAT2; Lysophosphatidylethanolamine acyltransferase 2", "protein_names_refseq": "calcineurin B subunit-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45670)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11910074;16098107;19445718;27862469;28408542", "class_list": "", "function": "Possesses acyl-CoA-dependent lysophospholipid acyltransferase activity with a subset of lysophospholipids as substrates (PubMed:19445718, PubMed:28408542). Exhibits strong acylation activity on lysophosphatidylethanolamine (LPE), and lower activity on lysophosphatidylcholine (LPC) and lysophosphatidylserine (LPS) (PubMed:19445718). Exhibits acylation activity on both LPE and LPC (PubMed:28408542). Has a preference for 18:1-LPE over 16:0-LPE as acceptor (PubMed:19445718). Palmitoyl-CoA (16:0-CoA) is a better acyl donor than oleoyl-CoA (18:1-CoA) (PubMed:19445718, PubMed:28408542). Among several different acyl-CoA species the best acyl donor is eicosanoyl-CoA (20:0-CoA) (PubMed:28408542). Activity is calcium-independent (PubMed:19445718). Its activity is essential for maintaining adequate levels of phosphatidylethanolamine (PE), LPE and LPC in the cells, which is crucial for plant growth regulation (PubMed:28408542)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64646;Q8GY20", "ec_number_list": [ { "id": "2.3.1.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.23", "type": "external" }, { "id": "2.3.1.n6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n6", "type": "external" }, { "id": "2.3.1.n7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.n7", "type": "external" }, { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" }, { "id": "2.3.1.51", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.51", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity;GO:0071617 lysophospholipid acyltransferase activity;GO:0106262 1-acylglycerophosphoethanolamine O-acyltransferase activity;GO:0106263 1-acylglycerophosphoserine O-acyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0031902 late endosome membrane", "go_biological_process": "GO:0000038 very long-chain fatty acid metabolic process;GO:0006644 phospholipid metabolic process;GO:0008654 phospholipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8S8S2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8S9-1", "uniprot_id": [ { "id": "MES1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8S9", "type": "external" } ], "mass": 29766.0, "length": 263, "protein_name": "Methylesterase 1", "gene_name": "MES1", "organism": "Arabidopsis", "refseq_name": "methyl esterase 1", "refseq_ac": [ { "id": "NP_179943", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179943", "type": "external" } ], "gene_names_uniprotkb": "MES1; F26B6.27", "gene_names_refseq": "ARABIDOPSIS THALIANA METHYL ESTERASE 1; ATMES1; F26B6.27; F26B6_27; MES1; methyl esterase 1", "protein_names_uniprotkb": "Methylesterase 1; 3.1.1.-; AtMES1", "protein_names_refseq": "methyl esterase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G23620)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;18467465;18643994;27862469", "class_list": "", "function": "Methylesterase shown to have carboxylesterase activity, methyl indole-3-acetic acid (MeIAA) esterase activity, methyl salicylate (MeSA) esterase activity and methyl jasmonate (MeJA) esterase activity in vitro. Required to convert methyl salicylate (MeSA) to salicylic acid (SA) as part of the signal transduction pathways that activate systemic acquired resistance in systemic tissue. MeSA is believed to be an inactive form that needs to be demethylated to exert a biological effect., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84WR3", "ec_number_list": [ { "id": "3.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0016788 hydrolase activity, acting on ester bonds;GO:0080030 methyl indole-3-acetate esterase activity;GO:0080031 methyl salicylate esterase activity;GO:0080032 methyl jasmonate esterase activity", "go_cellular_component": "", "go_biological_process": "GO:0045087 innate immune response;GO:0050832 defense response to fungus;GO:0031408 oxylipin biosynthetic process;GO:0009627 systemic acquired resistance;GO:0009694 jasmonic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8S8S9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S905-1", "uniprot_id": [ { "id": "KN7A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S905", "type": "external" } ], "mass": 110174.0, "length": 974, "protein_name": "Kinesin-like protein KIN-7A", "gene_name": "KIN7A", "organism": "Arabidopsis", "refseq_name": "ATP binding microtubule motor family protein", "refseq_ac": [ { "id": "NP_173273", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173273", "type": "external" } ], "gene_names_uniprotkb": "KIN7A; F15H18.12; HIK; NACK1", "gene_names_refseq": "ARABIDOPSIS NPK1-ACTIVATING KINESIN 1; ATNACK1; F15H18.12; F15H18_12; HIK; HINKEL; NACK1; NPK1-ACTIVATING KINESIN 1", "protein_names_uniprotkb": "Kinesin-like protein KIN-7A; AtNACK1; NPK1-activating kinesin-1; Protein HINKEL", "protein_names_refseq": "ATP binding microtubule motor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18370)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;11472632;11818068;11955449;15569152;16448571;19825582;20802223;22006334;22038119;23451828;25502072;26745275;27862469", "class_list": "", "function": "Probable plus end-directed motor protein that functions in the NACK-PQR (ANP1-MKK6-MPK4) MAP kinase signaling pathway, which is essential for somatic cell cytokinesis, especially for the cell-plate formation and its expansion. Regulates the activity and the localization of ANP1, probably by association through the non-catalytic region of the kinase. Functionally redundant with NACK2 and essential to promote the progression of cytokinesis and for cellularization (formation of the cell plate) during microgametogenesis and megagametogenesis., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9LPQ5", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005874 microtubule;GO:0009524 phragmoplast", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0000911 cytokinesis by cell plate formation;GO:0009555 pollen development;GO:0048229 gametophyte development;GO:0009558 embryo sac cellularization", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8S905-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S926-1", "uniprot_id": [ { "id": "ATG8E_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S926", "type": "external" } ], "mass": 13947.0, "length": 122, "protein_name": "Autophagy-related protein 8e", "gene_name": "ATG8E", "organism": "Arabidopsis", "refseq_name": "AUTOPHAGY 8E", "refseq_ac": [ { "id": "NP_182042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182042", "type": "external" } ], "gene_names_uniprotkb": "ATG8E; APG8E; F4L23; T14P1.2", "gene_names_refseq": "ATATG8E; ATG8E; AUTOPHAGY 8E; T14P1.2", "protein_names_uniprotkb": "Autophagy-related protein 8e; AtAPG8e; Autophagy-related ubiquitin-like modifier ATG8e; Protein autophagy 8e", "protein_names_refseq": "AUTOPHAGY 8E", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45170)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;12114572;14593172;15494556;24249832;24563201;27862469", "class_list": "", "function": "Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q945K6", "ec_number_list": [], "go_molecular_function": "GO:0008429 phosphatidylethanolamine binding", "go_cellular_component": "GO:0000421 autophagosome membrane;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0016020 membrane", "go_biological_process": "GO:0097352 autophagosome maturation;GO:0000045 autophagosome assembly;GO:0015031 protein transport;GO:0045471 response to ethanol;GO:0009267 cellular response to starvation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8S926-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S948-1", "uniprot_id": [ { "id": "SPS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S948", "type": "external" } ], "mass": 44468.0, "length": 406, "protein_name": "Solanesyl diphosphate synthase 1, chloroplastic", "gene_name": "SPS1", "organism": "Arabidopsis", "refseq_name": "solanesyl diphosphate synthase 1", "refseq_ac": [ { "id": "NP_001077840", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077840", "type": "external" } ], "gene_names_uniprotkb": "SPS1; SPPS; SPS; T30F21.15", "gene_names_refseq": "AtSPS1; SPS1; T30F21.15; T30F21_15; solanesyl diphosphate synthase 1", "protein_names_uniprotkb": "Solanesyl diphosphate synthase 1, chloroplastic; 2.5.1.29; 2.5.1.85; All-trans-nonaprenyl-diphosphate synthase 1 (geranylgeranyl-diphosphate specific); AtSPS1; Geranylgeranyl diphosphate synthase", "protein_names_refseq": "solanesyl diphosphate synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78510)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;12437513;15653808;15784989;19376835;23913686;26039552;26432861;27862469;29901834", "class_list": "", "function": "Involved in providing solanesyl diphosphate for plastoquinone-9 (PQ-9) formation in plastids (PubMed:12437513, PubMed:23913686, PubMed:26039552). Catalyzes the elongation of the prenyl side chain of PQ-9 in plastids (PubMed:23913686, PubMed:26039552). Contributes to the biosynthesis of plastochromanol-8 (PC-8) in plastids (PubMed:23913686, PubMed:26039552). Does not contribute to the synthesis of tocopherol or ubiquinone (PubMed:23913686). PQ-9 and PC-8 are lipophilic antioxidants that act as protectant against photooxidative stress under high light stress conditions (PubMed:23913686, PubMed:26039552, PubMed:29901834). Prefers geranylgeranyl diphosphate to farnesyl diphosphate as substrate (PubMed:12437513). No activity with geranyl diphosphate or dimethylallyl diphosphate as substrate (PubMed:12437513)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQY5;Q0WMS5;Q9SYN0", "ec_number_list": [ { "id": "2.5.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.1", "type": "external" }, { "id": "2.5.1.10", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.10", "type": "external" }, { "id": "2.5.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.29", "type": "external" }, { "id": "2.5.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.-", "type": "external" }, { "id": "2.5.1.85", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.85", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004659 prenyltransferase activity;GO:0004311 geranylgeranyl diphosphate synthase activity;GO:0052924 all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0008299 isoprenoid biosynthetic process;GO:0010236 plastoquinone biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8S948-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S9K3-1", "uniprot_id": [ { "id": "VAR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S9K3", "type": "external" } ], "mass": 85945.0, "length": 758, "protein_name": "Zinc finger protein VAR3, chloroplastic", "gene_name": "VAR3", "organism": "Arabidopsis", "refseq_name": "zinc finger (Ran-binding) family protein", "refseq_ac": [ { "id": "NP_197281", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197281", "type": "external" } ], "gene_names_uniprotkb": "VAR3; MVA3.140; MVA3.15; OZ1", "gene_names_refseq": "MVA3.15; MVA3_15; VAR3; VARIEGATED 3", "protein_names_uniprotkb": "Zinc finger protein VAR3, chloroplastic; Organelle Zinc finger 1; Protein VARIEGATED 3", "protein_names_refseq": "zinc finger (Ran-binding) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G17790)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "14593172;15340011;25561503;25768119;27862469;28213559;9405937", "class_list": "", "function": "Probable component of some protein complex required for chloroplast and palisade cell development (PubMed:15340011). Involved in C-to-U editing of chloroplastic RNA. Controls a large number of chloroplastic editing sites. Binds the editing recognition trans-factors PCMP-H51/CRR28 and PCMP-H12/OTP82 (PubMed:25768119)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q64M74;Q9FN73", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006397 mRNA processing;GO:0009658 chloroplast organization;GO:1900871 chloroplast mRNA modification", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8S9K3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWF1-1", "uniprot_id": [ { "id": "SH3P2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWF1", "type": "external" } ], "mass": 40925.0, "length": 368, "protein_name": "SH3 domain-containing protein 2", "gene_name": "SH3P2", "organism": "Arabidopsis", "refseq_name": "SH3 domain-containing protein", "refseq_ac": [ { "id": "NP_001190913", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190913", "type": "external" } ], "gene_names_uniprotkb": "SH3P2; T4L20.240", "gene_names_refseq": "T4L20.240; T4L20_240", "protein_names_uniprotkb": "SH3 domain-containing protein 2; AtSH3P2", "protein_names_refseq": "SH3 domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34660)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11701884;14593172;24249832;25561503;25624505;25699591;27862469;28584166;30833711", "class_list": "", "function": "Regulator for autophaosome formation and/or maturation (PubMed:24249832, Ref.9). Binds phosphatidylinositol-phosphate; highest affinity for vesicles containing PtdIns(3,4,5)P(3), followed by those containing PtdIns(4,5)P(2) and PtdIns(3,4)P(2), with minimal binding to phosphatidylinositol monophosphates, including PtdIns(3)P (PubMed:24249832, PubMed:28584166). Together with DRP1A, converts the fused vesicles to tubular structures at the cell plate during cytokinesis (PubMed:28584166)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4JLF5;F4JLF6;O65689", "ec_number_list": [], "go_molecular_function": "GO:0005546 phosphatidylinositol-4,5-bisphosphate binding;GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding;GO:0030674 protein-macromolecule adaptor activity;GO:0043325 phosphatidylinositol-3,4-bisphosphate binding;GO:0032266 phosphatidylinositol-3-phosphate binding", "go_cellular_component": "GO:0000421 autophagosome membrane;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005829 cytosol", "go_biological_process": "GO:0072583 clathrin-dependent endocytosis;GO:1903527 positive regulation of membrane tubulation;GO:0009920 cell plate formation involved in plant-type cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8VWF1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWG3-1", "uniprot_id": [ { "id": "TT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWG3", "type": "external" } ], "mass": 34512.0, "length": 303, "protein_name": "Protein TRANSPARENT TESTA 1", "gene_name": "TT1", "organism": "Arabidopsis", "refseq_name": "C2H2 and C2HC zinc fingers superfamily protein", "refseq_ac": [ { "id": "NP_174737", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174737", "type": "external" } ], "gene_names_uniprotkb": "TT1; F11O6.15; WIP1", "gene_names_refseq": "TT1; WIP domain protein 1; WIP1; transparent testa 1", "protein_names_uniprotkb": "Protein TRANSPARENT TESTA 1; TTL1; WIP-domain protein 1; Zinc finger protein TT1", "protein_names_refseq": "C2H2 and C2HC zinc fingers superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G34790)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11782451;20541552;21477081;27862469", "class_list": "", "function": "May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat (PubMed:21477081). Plays a role in the regulatory network controlling flavonoid accumulation in endothelium cells during seed development (PubMed:21477081)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SUZ2;Q8VWL1", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010468 regulation of gene expression;GO:0009813 flavonoid biosynthetic process;GO:0080022 primary root development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VWG3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWG7-1", "uniprot_id": [ { "id": "TDX_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWG7", "type": "external" } ], "mass": 42846.0, "length": 380, "protein_name": "TPR repeat-containing thioredoxin TDX", "gene_name": "TDX", "organism": "Arabidopsis", "refseq_name": "tetraticopeptide domain-containing thioredoxin", "refseq_ac": [ { "id": "NP_001078175", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078175", "type": "external" } ], "gene_names_uniprotkb": "TDX; MEB5.9", "gene_names_refseq": "ARABIDOPSIS THALIANA HSP70-INTERACTING PROTEIN 2; AT3G17870; ATHIP2; ATTDX; HIP; HSC-70 INTERACTING PROTEIN; TDX; tetraticopeptide domain-containing thioredoxin", "protein_names_uniprotkb": "TPR repeat-containing thioredoxin TDX; AtHIP2; AtTDX; HSP70-interacting protein 2; Tetratricoredoxin", "protein_names_refseq": "tetraticopeptide domain-containing thioredoxin", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G17880)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10819329;12433921;14593172;19293385;19376835;19825616;21768351;22223895;23111157;23660473;23776212;25561503;27862469;30833711", "class_list": "", "function": "Thiol-disulfide oxidoreductase that possesses insulin disulfide bonds reducing activity, disulfide reductase, foldase chaperone and holdase chaperone activities. Heat shock causes oligomerization and formation of high molecular weiht (HMW) complexes with concomitant functional switching from a disulfide reductase and foldase chaperone to a holdase chaperone. May interact with HSP70 proteins through the TPR repeats., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XJ63;Q8LG82;Q9LVI2;Q9LVI3", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0046983 protein dimerization activity;GO:0030544 Hsp70 protein binding;GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor", "go_cellular_component": "GO:0005737 cytoplasm;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0051259 protein complex oligomerization;GO:0006457 protein folding;GO:0010286 heat acclimation", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8VWG7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWI7-1", "uniprot_id": [ { "id": "KN10A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWI7", "type": "external" } ], "mass": 97419.0, "length": 869, "protein_name": "Kinesin-like protein KIN-10A", "gene_name": "KIN10A", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_567426", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567426", "type": "external" } ], "gene_names_uniprotkb": "KIN10A; FCAALL.179; PAKRP2; dl3205w", "gene_names_refseq": "DL3205W; FCAALL.179", "protein_names_uniprotkb": "Kinesin-like protein KIN-10A; AtPAKRP2; Phragmoplast-associated kinesin-related protein 2", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14330)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11472632;11701879;16448571;20466843;22038119;27862469;9461215", "class_list": "", "function": "Probable plus end-directed motor protein that may contribute to the transport of Golgi-derived vesicles in the phragmoplast., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23291;Q0WT18", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0016887 ATP hydrolysis activity;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005871 kinesin complex;GO:0009507 chloroplast;GO:0009524 phragmoplast", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0047496 vesicle transport along microtubule;GO:0031535 plus-end directed microtubule sliding", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VWI7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWZ8-1", "uniprot_id": [ { "id": "SMO22_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWZ8", "type": "external" } ], "mass": 30927.0, "length": 266, "protein_name": "Methylsterol monooxygenase 2-2", "gene_name": "SMO2-2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "SMO2-2; F22G5.23; SMO1", "gene_names_refseq": "", "protein_names_uniprotkb": "Methylsterol monooxygenase 2-2; 1.14.18.11; 1.14.18.9; AtSMO1; Sterol 4-alpha-methyl-oxidase 1; Sterol 4-alpha-methyl-oxidase 2-2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07420)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11707264;14653780;19423640;27006488;27862469", "class_list": "", "function": "Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the second methyl group at the C-4 position (PubMed:11707264). 24-ethylidenelophenol and 24-ethyllophenol are the preferred substrates (PubMed:11707264). Together with SMO2-1, required during embryogenesis, probably by maintaining sterols and auxin homeostasis (PubMed:27006488)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFL5;Q8LBE1;Q9LNW2", "ec_number_list": [ { "id": "1.14.18.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.18.9", "type": "external" }, { "id": "1.14.18.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.18.11", "type": "external" }, { "id": "1.14.18.10", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.18.10", "type": "external" } ], "go_molecular_function": "GO:0000254 C-4 methylsterol oxidase activity;GO:0005506 iron ion binding;GO:0102177 24-methylenelophenol methyl oxidase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0016126 sterol biosynthetic process;GO:0009793 embryo development ending in seed dormancy;GO:0080065 4-alpha-methyl-delta7-sterol oxidation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VWZ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VX13-1", "uniprot_id": [ { "id": "PDI13_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VX13", "type": "external" } ], "mass": 64212.0, "length": 579, "protein_name": "Protein disulfide isomerase-like 1-3", "gene_name": "PDIL1-3", "organism": "Arabidopsis", "refseq_name": "PDI-like 1-3", "refseq_ac": [ { "id": "NP_001118842", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118842", "type": "external" } ], "gene_names_uniprotkb": "PDIL1-3; F28P10.60; PDI1; PDI72; PDIL2-1; T15C9.4", "gene_names_refseq": "ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 1; ATPDI1; ATPDIL1-3; PDI-like 1-3; PDI1; PDIL1-3; PROTEIN DISULFIDE ISOMERASE 1; T15C9.4", "protein_names_uniprotkb": "Protein disulfide isomerase-like 1-3; 5.3.4.1; AtPDI1; AtPDIL1-3; AtPDIL2-1; Protein disulfide isomerase 1; Protein disulfide isomerase-like 2-1", "protein_names_refseq": "PDI-like 1-3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54960)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;15684019;18574595;19423640;20525253;27862469", "class_list": "", "function": "Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds., [UniProtKB]", "predicted_glycosites": 8, "predicted_n_glycosites": 8, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "B3H5N9;Q9SV44", "ec_number_list": [], "go_molecular_function": "GO:0003756 protein disulfide isomerase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005783 endoplasmic reticulum;GO:0005788 endoplasmic reticulum lumen;GO:0005829 cytosol;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0006457 protein folding;GO:0034976 response to endoplasmic reticulum stress", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VX13-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VXV7-1", "uniprot_id": [ { "id": "LDL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VXV7", "type": "external" } ], "mass": 93312.0, "length": 844, "protein_name": "Lysine-specific histone demethylase 1 homolog 1", "gene_name": "LDL1", "organism": "Arabidopsis", "refseq_name": "LSD1-like 1", "refseq_ac": [ { "id": "NP_176471", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176471", "type": "external" } ], "gene_names_uniprotkb": "LDL1; F23N19.19; F23N19_19; KDM1C; LSD1; SWP1", "gene_names_refseq": "ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE; ATLSD1; ATSWP1; F23N19.21; F23N19_21; LDL1; LSD1-like 1; LSD1; LYSINE-SPECIFIC HISTONE DEMETHYLASE; SWP1", "protein_names_uniprotkb": "Lysine-specific histone demethylase 1 homolog 1; 1.-.-.-; AtLSD1; AtSWP1; Flavin-containing amine oxidase domain-containing protein 1; Lysine-specific histone demethylase 1C; Protein LSD1-LIKE 1; Protein SWIRM-PAO 1", "protein_names_refseq": "LSD1-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62830); (ath:AT1G62840)", "pathway_count": 2, "publication_count": 8, "publication_id_list": "11130712;14593172;17224141;17921315;21690391;23660473;25852712;27862469", "class_list": "", "function": "Probable histone demethylase that reduces the levels of histone H3 'Lys-4' methylation in chromatin of the floral repressor FLOWERING LOCUS C (FLC) and the sporophytically silenced floral repressor FWA (PubMed:17921315). Seems to act in partial redundancy with FLOWERING LOCUS D (FLD) to repress FLC expression (PubMed:17921315). Required for cytosine methylation of FWA (PubMed:17921315). Controls primary seed dormancy by regulating DOG1 and abscisic acid signaling-related genes (PubMed:25852712). In association with OTU6/OTLD1, involved in transcriptional gene repression via histone deubiquitination and demethylation (PubMed:21690391)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WM3;Q9SI68", "ec_number_list": [], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0042800 histone H3K4 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VXV7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VXZ5-1", "uniprot_id": [ { "id": "XG113_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VXZ5", "type": "external" } ], "mass": 73213.0, "length": 644, "protein_name": "Arabinosyltransferase XEG113", "gene_name": "XEG113", "organism": "Arabidopsis", "refseq_name": "xyloglucanase 113", "refseq_ac": [ { "id": "NP_850250", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850250", "type": "external" } ], "gene_names_uniprotkb": "XEG113; LRD5", "gene_names_refseq": "GT77; T20F21.19; T20F21_19; XEG113; xyloglucanase 113", "protein_names_uniprotkb": "Arabinosyltransferase XEG113; 2.4.2.-; Protein LATERAL ROOT DEVELOPMENT 5; Xyloglucanase 113", "protein_names_refseq": "xyloglucanase 113", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35610)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14593172;19423640;19667208;21680836;24619997;24905498;25944827;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Plays a role in the arabinosylation of cell wall components. Involved in the arabinosylation of extensin proteins in root hair cells (PubMed:19667208, PubMed:21680836). Extensins are structural glycoproteins present in cell walls and its arabinosylation is important for cell elongation, root hair cell development, lateral root development and root hair tip growth (PubMed:19667208, PubMed:21680836, PubMed:24619997, PubMed:25944827)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "B9DFT3;Q9ZQN4", "ec_number_list": [], "go_molecular_function": "GO:0052636 arabinosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0052325 cell wall pectin biosynthetic process;GO:0080147 root hair cell development;GO:0031506 cell wall glycoprotein biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8VXZ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VXZ7-1", "uniprot_id": [ { "id": "AGAL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VXZ7", "type": "external" } ], "mass": 48363.0, "length": 437, "protein_name": "Alpha-galactosidase 3", "gene_name": "AGAL3", "organism": "Arabidopsis", "refseq_name": "Melibiase family protein", "refseq_ac": [ { "id": "NP_191190", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191190", "type": "external" } ], "gene_names_uniprotkb": "AGAL3; F18O21.270", "gene_names_refseq": "", "protein_names_uniprotkb": "Alpha-galactosidase 3; 3.2.1.22; Alpha-D-galactoside galactohydrolase 3; AtAGAL3; Melibiase", "protein_names_refseq": "Melibiase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G56310)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;12773619;14593172;15034167;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "May regulate leaf (and possibly other organ) development by functioning in cell wall loosening and cell wall expansion., [UniProtKB, UniProtKB]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "F4IZE4;Q9LYL2", "ec_number_list": [], "go_molecular_function": "GO:0004557 alpha-galactosidase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005773 vacuole;GO:0000325 plant-type vacuole;GO:0048046 apoplast", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0071555 cell wall organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VXZ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY05-1", "uniprot_id": [ { "id": "SWI3D_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY05", "type": "external" } ], "mass": 107797.0, "length": 985, "protein_name": "SWI/SNF complex subunit SWI3D", "gene_name": "SWI3D", "organism": "Arabidopsis", "refseq_name": "DNA-binding family protein", "refseq_ac": [ { "id": "NP_195169", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195169", "type": "external" } ], "gene_names_uniprotkb": "SWI3D; CHB3; F10M10.200; T4L20.10", "gene_names_refseq": "ATSWI3D; CHB3; F10M10.200; F10M10_200; SWITCH/SUCROSE NONFERMENTING 3D", "protein_names_uniprotkb": "SWI/SNF complex subunit SWI3D; AtSWI3D; Transcription regulatory protein SWI3D", "protein_names_refseq": "DNA-binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34430)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;11910074;14593172;14682613;16055636;20466843;23111157;23328941;23776212;24465213;25561503;27171427;27862469;30833711", "class_list": "", "function": "Component of a multiprotein complex equivalent of the SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O65671;Q3E9R6;Q8GZ04;Q9SZ08", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8VY05-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY10-1", "uniprot_id": [ { "id": "UBC24_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY10", "type": "external" } ], "mass": 100484.0, "length": 907, "protein_name": "Probable ubiquitin-conjugating enzyme E2 24", "gene_name": "UBC24", "organism": "Arabidopsis", "refseq_name": "phosphate 2", "refseq_ac": [ { "id": "NP_850218", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850218", "type": "external" } ], "gene_names_uniprotkb": "UBC24; PHO2; T1B8.8", "gene_names_refseq": "ATUBC24; PHO2; T1B8.8; T1B8_8; UBC24; UBIQUITIN-CONJUGATING ENZYME 24; phosphate 2", "protein_names_uniprotkb": "Probable ubiquitin-conjugating enzyme E2 24; 2.3.2.23; AtPHO2; E2 ubiquitin-conjugating enzyme 24; Ubiquitin carrier protein 24; Ubiquitin-protein ligase 24", "protein_names_refseq": "phosphate 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33770)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617197;14593172;16339806;16679417;16679424;17643101;18390805;22634761;24122828;24122829;24474629;27862469", "class_list": "", "function": "E2 ubiquitin-protein ligase that mediates E1-dependent protein ubiquitination (PubMed:24474629). Mediates PHO1 degradation through multivesicular body-mediated vacuolar proteolysis in response to inorganic phosphate (Pi) availability (PubMed:22634761). Negatively regulates the protein abundance of PHF1 and PHT1s under Pi-sufficient conditions by facilitating the degradation of PHT1 proteins at the endomembrane (PubMed:22634761, PubMed:24122829). Functions cooperatively with NLA to regulate the abundance of the inorganic phosphate (Pi) transporters PHT1-1, PHT1-2 and PHT1-3 in different subcellular compartments (PubMed:24122828). Regulates Pi homeostasis by mediating, cooperatively with NLA, polyubiquitination of PHT1-4 and its targeting for degradation (PubMed:24474629)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P93012;Q0WLN6;Q0WM96", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016874 ligase activity;GO:0061631 ubiquitin conjugating enzyme activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0055062 phosphate ion homeostasis;GO:0006817 phosphate ion transport;GO:0016036 cellular response to phosphate starvation;GO:2000185 regulation of phosphate transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8VY10-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY77-1", "uniprot_id": [ { "id": "TGD5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY77", "type": "external" } ], "mass": 9174.0, "length": 91, "protein_name": "Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic", "gene_name": "TGD5", "organism": "Arabidopsis", "refseq_name": "glycine-rich protein", "refseq_ac": [ { "id": "NP_001031097", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031097", "type": "external" } ], "gene_names_uniprotkb": "TGD5; T22C5", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic", "protein_names_refseq": "glycine-rich protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27695)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;26410300;27862469", "class_list": "", "function": "Facilitates lipid transfer from the outer to the inner plastid envelope by bridging TGD4 with the TGD1,2,3 transport complex. Required for endoplasmic reticulum-to-plastid lipid trafficking as part of the eukaryotic pathway of thylakoid lipid assembly., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005319 lipid transporter activity", "go_cellular_component": "GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:1990052 ER to chloroplast lipid transport;GO:0009666 plastid outer membrane organization;GO:0009667 plastid inner membrane organization;GO:0010441 guard cell development;GO:1901965 endoplasmic reticulum to chloroplast transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8VY77-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY88-1", "uniprot_id": [ { "id": "LTD_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY88", "type": "external" } ], "mass": 19190.0, "length": 175, "protein_name": "Protein LHCP TRANSLOCATION DEFECT", "gene_name": "LTD", "organism": "Arabidopsis", "refseq_name": "Ankyrin repeat family protein", "refseq_ac": [ { "id": "NP_564580", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564580", "type": "external" } ], "gene_names_uniprotkb": "LTD; F8A12.12; GDC1", "gene_names_refseq": "F8A12.12; F8A12_12; GDC1; Grana Deficient Chloroplast 1; LHCP translocation defect; LTD", "protein_names_uniprotkb": "Protein LHCP TRANSLOCATION DEFECT; Protein GRANA-DEFICIENT CHLOROPLAST 1", "protein_names_refseq": "Ankyrin repeat family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50900)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;21098677;21505433;22060019;27862469", "class_list": "", "function": "Involved in the import of light-harvesting complex proteins (LHCP) and subsequent routing of these proteins to the chloroplast signal recognition particle (SRP) pathway., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6J0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0090391 granum assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VY88-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY92-1", "uniprot_id": [ { "id": "P24DA_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY92", "type": "external" } ], "mass": 24414.0, "length": 214, "protein_name": "Transmembrane emp24 domain-containing protein p24delta10", "gene_name": "F10D13_26", "organism": "Arabidopsis", "refseq_name": "emp24/gp25L/p24 family/GOLD family protein", "refseq_ac": [ { "id": "NP_177105", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177105", "type": "external" } ], "gene_names_uniprotkb": "F10D13_26", "gene_names_refseq": "F10D13.26; F10D13_26", "protein_names_uniprotkb": "Transmembrane emp24 domain-containing protein p24delta10; p24 family protein delta10; p24 family protein delta2d; p24delta10; p24delta2d", "protein_names_refseq": "emp24/gp25L/p24 family/GOLD family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69460)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;22132757;22577184;27862469", "class_list": "", "function": "Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9C791", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0030134 COPII-coated ER to Golgi transport vesicle;GO:0005789 endoplasmic reticulum membrane;GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0007030 Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VY92-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYA3-1", "uniprot_id": [ { "id": "WAKLJ_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYA3", "type": "external" } ], "mass": 85704.0, "length": 769, "protein_name": "Wall-associated receptor kinase-like 10", "gene_name": "WAKL10", "organism": "Arabidopsis", "refseq_name": "WALL ASSOCIATED KINASE (WAK)-LIKE 10", "refseq_ac": [ { "id": "NP_178086", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178086", "type": "external" } ], "gene_names_uniprotkb": "WAKL10; F20B17.10", "gene_names_refseq": "ATWAKL10; F20B17.10; F20B17_10; WAKL10; WALL ASSOCIATED KINASE (WAK)-LIKE 10", "protein_names_uniprotkb": "Wall-associated receptor kinase-like 10; 2.7.11.-", "protein_names_refseq": "WALL ASSOCIATED KINASE (WAK)-LIKE 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79680)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;12068092;14593172;27862469", "class_list": "", "function": "Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component., [UniProtKB]", "predicted_glycosites": 9, "predicted_n_glycosites": 8, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "Q9MA08", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004383 guanylate cyclase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "GO:0006952 defense response;GO:0007166 cell surface receptor signaling pathway;GO:0009617 response to bacterium;GO:0009620 response to fungus;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8VYA3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYC8-1", "uniprot_id": [ { "id": "RIN2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYC8", "type": "external" } ], "mass": 64564.0, "length": 578, "protein_name": "E3 ubiquitin protein ligase RIN2", "gene_name": "RIN2", "organism": "Arabidopsis", "refseq_name": "RPM1 interacting protein 2", "refseq_ac": [ { "id": "NP_001328533", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328533", "type": "external" } ], "gene_names_uniprotkb": "RIN2; AMFR-1A; F24A6.70", "gene_names_refseq": "F24A6.70; F24A6_70; RIN2; RPM1 interacting protein 2", "protein_names_uniprotkb": "E3 ubiquitin protein ligase RIN2; 2.3.2.27; AMF receptor-like protein 1A; RING-type E3 ubiquitin transferase RIN2; RPM1-interacting protein 2", "protein_names_refseq": "RPM1 interacting protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25230)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;14593172;16212605;27862469", "class_list": "", "function": "E3 ubiquitin protein ligase that acts as a positive regulator of RPM1- and RPS2-dependent hypersensitive response (HR), in association with RIN3. Probably not required for RPM1 degradation during HR., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A6XER5;Q9SB40", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity;GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0009626 plant-type hypersensitive response;GO:0034052 positive regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8VYC8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYD4-1", "uniprot_id": [ { "id": "CHX23_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYD4", "type": "external" } ], "mass": 95867.0, "length": 867, "protein_name": "Cation/H(+) antiporter 23, chloroplastic", "gene_name": "CHX23", "organism": "Arabidopsis", "refseq_name": "cation/H+ exchanger 23", "refseq_ac": [ { "id": "NP_001030975", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030975", "type": "external" } ], "gene_names_uniprotkb": "CHX23; F3F20.2", "gene_names_refseq": "ATCHX23; CHX23; F3F20.2; F3F20_2; cation/H+ exchanger 23", "protein_names_uniprotkb": "Cation/H(+) antiporter 23, chloroplastic; AtCHX23; Protein CATION/H+ EXCHANGER 23", "protein_names_refseq": "cation/H+ exchanger 23", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G05580)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11500563;14593172;15220473;15347787;21239645;21976771;27862469", "class_list": "", "function": "Operates as a K(+)/H(+) antiporter or Na(+)/H(+) antiporter of the chloroplast envelope that functions in pH homeostasis and chloroplast development. Monovalent cation transporter with a preference for Cs(+), K(+) and Rb(+) relative to Na(+) or Li(+). Required for pollen tube guidance, but not for normal pollen development. May also be involved in the development or function of the female gametophyte., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q2V4Q6;Q58P62;Q9SYJ9", "ec_number_list": [], "go_molecular_function": "GO:0015297 antiporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0012505 endomembrane system;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006885 regulation of pH;GO:0071805 potassium ion transmembrane transport;GO:1902600 proton transmembrane transport;GO:0010183 pollen tube guidance", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VYD4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYF5-2", "uniprot_id": [ { "id": "NILP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYF5", "type": "external" } ], "mass": 33533.0, "length": 299, "protein_name": "N-carbamoylputrescine amidase", "gene_name": "CPA", "organism": "Arabidopsis", "refseq_name": "nitrilase-like protein 1", "refseq_ac": [ { "id": "NP_565650", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565650", "type": "external" } ], "gene_names_uniprotkb": "CPA; F10A12.13; NLP1", "gene_names_refseq": "ATNLP1; CPA; F10A12.13; F10A12_13; N-CARBAMOYLPUTRESCINE AMIDOHYDROLASE; NLP1; nitrilase-like protein 1", "protein_names_uniprotkb": "N-carbamoylputrescine amidase; 3.5.1.53; Nitrilase-like protein 1", "protein_names_refseq": "nitrilase-like protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27450)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;12435743;14593172;27862469", "class_list": "", "function": "Involved in polyamine biosynthesis (PubMed:12435743). Catalyzes the hydrolysis of N-carbamoylputrescine to produce putrescine and ammonia (PubMed:12435743)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZQH4", "ec_number_list": [ { "id": "3.5.1.53", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.53", "type": "external" } ], "go_molecular_function": "GO:0050126 N-carbamoylputrescine amidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0009446 putrescine biosynthetic process;GO:0033388 putrescine biosynthetic process from arginine", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8VYF5-2", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYF7-1", "uniprot_id": [ { "id": "WHY2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYF7", "type": "external" } ], "mass": 26295.0, "length": 238, "protein_name": "Single-stranded DNA-binding protein WHY2, mitochondrial", "gene_name": "WHY2", "organism": "Arabidopsis", "refseq_name": "WHIRLY 2", "refseq_ac": [ { "id": "NP_177282", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177282", "type": "external" } ], "gene_names_uniprotkb": "WHY2; F3I17.9", "gene_names_refseq": "ATWHY2; F3I17.9; F3I17_9; WHIRLY 2; WHY2", "protein_names_uniprotkb": "Single-stranded DNA-binding protein WHY2, mitochondrial; AtWHY2; Protein WHIRLY 2", "protein_names_refseq": "WHIRLY 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G71260)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;15708347;15967440;18423020;20551348;22762281;27862469", "class_list": "", "function": "Single-stranded DNA-binding protein that associates with mitochondrial DNA and may play a role in the regulation of the gene expression machinery. Also seems to be required to prevent break-induced DNA rearrangements in the mitochondrial genome. Can bind to melt double-stranded DNA in vivo., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FVV2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:1990391 DNA repair complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006281 DNA repair;GO:0006952 defense response;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VYF7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYI0-1", "uniprot_id": [ { "id": "LSM8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYI0", "type": "external" } ], "mass": 10706.0, "length": 98, "protein_name": "Sm-like protein LSM8", "gene_name": "LSM8", "organism": "Arabidopsis", "refseq_name": "Small nuclear ribonucleoprotein family protein", "refseq_ac": [ { "id": "NP_001031238", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031238", "type": "external" } ], "gene_names_uniprotkb": "LSM8; F1E22.8", "gene_names_refseq": "AtLSM8; F1E22.8; F1E22_8; LSM8; SM-like 8", "protein_names_uniprotkb": "Sm-like protein LSM8; AtLSM8; U6 snRNA-associated Sm-like protein LSM8", "protein_names_refseq": "Small nuclear ribonucleoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65700)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;23221597;23620288;27862469;32396196", "class_list": "", "function": "Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs). LSM8 is essential for the formation of the nuclear LSM2-LSM8 complex involved in the accurate splicing of selected development-related mRNAs through the stabilization of the spliceosomal U6 snRNA (PubMed:32396196). Plays a critical role in the regulation of development-related gene expression., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHY4", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0071011 precatalytic spliceosome;GO:0046540 U4/U6 x U5 tri-snRNP complex;GO:0005688 U6 snRNP", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome;GO:0016070 RNA metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VYI0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYI1-1", "uniprot_id": [ { "id": "SBH1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYI1", "type": "external" } ], "mass": 29819.0, "length": 260, "protein_name": "Sphinganine C4-monooxygenase 1", "gene_name": "SBH1", "organism": "Arabidopsis", "refseq_name": "sphingoid base hydroxylase 1", "refseq_ac": [ { "id": "NP_177122", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177122", "type": "external" } ], "gene_names_uniprotkb": "SBH1; F24J1.22; T6C23.16", "gene_names_refseq": "F24J1.22; SBH1; sphingoid base hydroxylase 1", "protein_names_uniprotkb": "Sphinganine C4-monooxygenase 1; 1.14.18.5; Sphingoid C4-hydroxylase 1; Sphingoid base hydroxylase 1", "protein_names_refseq": "sphingoid base hydroxylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69640)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11297741;14593172;18612100;27862469", "class_list": "", "function": "Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Can use C18- and C20-sphinganine as substrates to produce C18- and C20-phytosphinganines (D-ribo-2-amino-1,3,4-trihydroxyoctadecane and -eicosane)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FWZ2", "ec_number_list": [ { "id": "1.14.18.5", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.18.5", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0016491 oxidoreductase activity;GO:0102772 sphingolipid C4-monooxygenase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0046520 sphingoid biosynthetic process;GO:0009640 photomorphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VYI1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYI9-1", "uniprot_id": [ { "id": "LTG31_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYI9", "type": "external" } ], "mass": 17972.0, "length": 182, "protein_name": "Non-specific lipid transfer protein GPI-anchored 31", "gene_name": "LTPG31", "organism": "Arabidopsis", "refseq_name": "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein", "refseq_ac": [ { "id": "NP_568984", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568984", "type": "external" } ], "gene_names_uniprotkb": "LTPG31; MHJ24.6; XYP1", "gene_names_refseq": "AtXYP1; MHJ24.6; MHJ24_6; XYP1; xylogen protein 1", "protein_names_uniprotkb": "Non-specific lipid transfer protein GPI-anchored 31; AtLTPG-31; AtXYP1; Protein LTP-GPI-ANCHORED 31; Xylogen protein 1", "protein_names_refseq": "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64080)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "14593172;15215864;21558309;23893219;27862469;9501997", "class_list": "", "function": "Probable lipid transfer protein (By similarity). Proteoglycan-like factor that exhibits xylogen activity consisting in mediating local and inductive cell-cell interactions required for xylem differentiation (PubMed:15215864, PubMed:21558309)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8Q1;Q9FMI9", "ec_number_list": [], "go_molecular_function": "GO:0008289 lipid binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0098552 side of membrane;GO:0009536 plastid", "go_biological_process": "GO:0006869 lipid transport;GO:0010089 xylem development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VYI9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYM2-1", "uniprot_id": [ { "id": "PHT11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYM2", "type": "external" } ], "mass": 57616.0, "length": 524, "protein_name": "Inorganic phosphate transporter 1-1", "gene_name": "PHT1-1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PHT1-1; APT2; MWF20.4; PHT1; PT1", "gene_names_refseq": "", "protein_names_uniprotkb": "Inorganic phosphate transporter 1-1; 1; AtPht1; H(+)/Pi cotransporter", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G43350)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10718197;12114577;12164813;12226502;14593172;15272879;16233751;16284308;20374526;22438062;23111157;23328941;24122828;27419465;27862469;8927627;9025304;9192698", "class_list": "", "function": "High-affinity transporter for external inorganic phosphate. Acts as a H(+):phosphate symporter in both low- and high-Pi conditions. Confers sensitivity to arsenate., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q96264;Q96302", "ec_number_list": [], "go_molecular_function": "GO:0015293 symporter activity;GO:0005315 phosphate transmembrane transporter activity;GO:1901683 arsenate ion transmembrane transporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006817 phosphate ion transport;GO:1901684 arsenate ion transmembrane transport;GO:0016036 cellular response to phosphate starvation", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8VYM2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYM4-1", "uniprot_id": [ { "id": "PSRP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYM4", "type": "external" } ], "mass": 27748.0, "length": 253, "protein_name": "Small ribosomal subunit protein cS22", "gene_name": "PSRP2", "organism": "Arabidopsis", "refseq_name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "refseq_ac": [ { "id": "NP_001030841", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030841", "type": "external" } ], "gene_names_uniprotkb": "PSRP2; F4F15.260", "gene_names_refseq": "PSRP2; plastid-specific ribosomal protein 2", "protein_names_uniprotkb": "Small ribosomal subunit protein cS22; 30S ribosomal protein 2, chloroplastic; Chloroplastic small ribosomal subunit protein cS22; PSRP-2; Plastid-specific 30S ribosomal protein 2, chloroplastic", "protein_names_refseq": "RNA-binding (RRM/RBD/RNP motifs) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G52150)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;12605670;14593172;19423640;20466843;21923745;24220572;27862469;36423343", "class_list": "", "function": "Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus. May have a role in the recruitment of stored chloroplast mRNAs for active protein synthesis (By similarity). Bind single strand DNA (ssDNA) and RNA in vitro. Exhibits RNA chaperone activity. Negatively regulates resistance responses to abiotic stresses during seed germination (e.g. salt, dehydration, and low temperature) and seedling growth (e.g. salt) (PubMed:24220572)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG26;Q9SUZ0", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0019843 rRNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009409 response to cold;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0010029 regulation of seed germination;GO:1901259 chloroplast rRNA processing", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8VYM4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYP0-1", "uniprot_id": [ { "id": "SCO11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYP0", "type": "external" } ], "mass": 37195.0, "length": 334, "protein_name": "Cytochrome c oxidase assembly factor HCC1", "gene_name": "HCC1", "organism": "Arabidopsis", "refseq_name": "electron transport SCO1/SenC family protein", "refseq_ac": [ { "id": "NP_566339", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566339", "type": "external" } ], "gene_names_uniprotkb": "HCC1; SCO1-1; T16O11.9", "gene_names_refseq": "HCC1; homologue of the copper chaperone SCO1", "protein_names_uniprotkb": "Cytochrome c oxidase assembly factor HCC1; HCC1; Homolog of the copper chaperone SCO1 member 1", "protein_names_refseq": "electron transport SCO1/SenC family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G08950)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;21041373;21543521;27862469;31348612", "class_list": "", "function": "Acts as a copper chaperone, delivering copper to the Cu(A) site on the cytochrome c oxidase subunit II (COX2) (By similarity). Plays an essential role in embryo development (PubMed:21041373)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SR94", "ec_number_list": [], "go_molecular_function": "GO:0005507 copper ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0033617 mitochondrial respiratory chain complex IV assembly;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VYP0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYP5-1", "uniprot_id": [ { "id": "ZDH14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYP5", "type": "external" } ], "mass": 34688.0, "length": 307, "protein_name": "Probable protein S-acyltransferase 14", "gene_name": "PAT14", "organism": "Arabidopsis", "refseq_name": "DHHC-type zinc finger family protein", "refseq_ac": [ { "id": "NP_191639", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191639", "type": "external" } ], "gene_names_uniprotkb": "PAT14; T4C21_210", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable protein S-acyltransferase 14; 2.3.1.225; Probable palmitoyltransferase At3g60800; Zinc finger DHHC domain-containing protein At3g60800", "protein_names_refseq": "DHHC-type zinc finger family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60800)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;22968831;27862469", "class_list": "", "function": "Palmitoyl acyltransferase., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZY3", "ec_number_list": [ { "id": "2.3.1.225", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.225", "type": "external" } ], "go_molecular_function": "GO:0019706 protein-cysteine S-palmitoyltransferase activity;GO:0019707 protein-cysteine S-acyltransferase activity", "go_cellular_component": "GO:0005769 early endosome;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0006612 protein targeting to membrane;GO:2000377 regulation of reactive oxygen species metabolic process;GO:0010150 leaf senescence;GO:1900055 regulation of leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8VYP5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYW6-1", "uniprot_id": [ { "id": "GAGT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYW6", "type": "external" } ], "mass": 61190.0, "length": 572, "protein_name": "Glutathione hydrolase 1", "gene_name": "GGT1", "organism": "Arabidopsis", "refseq_name": "gamma-glutamyl transpeptidase 1", "refseq_ac": [ { "id": "NP_195674", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195674", "type": "external" } ], "gene_names_uniprotkb": "GGT1; T19P19.30", "gene_names_refseq": "GGT1; T19P19.30; T19P19_30; gamma-glutamyl transpeptidase 1", "protein_names_uniprotkb": "Glutathione hydrolase 1; 2.3.2.2; 3.4.19.13; Gamma-glutamyltransferase 1; Gamma-glutamyltranspeptidase 1", "protein_names_refseq": "gamma-glutamyl transpeptidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39640)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;17316175;17545509;19423640;20959624;27862469", "class_list": "", "function": "May play a role in preventing oxidative stress by metabolizing extracellular oxidized glutathione (GSSG)., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "B9DI67;O65652", "ec_number_list": [ { "id": "2.3.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.2", "type": "external" }, { "id": "3.4.19.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.13", "type": "external" } ], "go_molecular_function": "GO:0036374 glutathione hydrolase activity;GO:0103068 leukotriene C4 gamma-glutamyl transferase activity;GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0048046 apoplast", "go_biological_process": "GO:0006751 glutathione catabolic process;GO:0006979 response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VYW6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYY5-1", "uniprot_id": [ { "id": "NCRK_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYY5", "type": "external" } ], "mass": 62192.0, "length": 565, "protein_name": "Receptor-like serine/threonine-protein kinase NCRK", "gene_name": "NCRK", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001031435", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031435", "type": "external" } ], "gene_names_uniprotkb": "NCRK; T3B23.8", "gene_names_refseq": "NCRK; T3B23.8; T3B23_8", "protein_names_uniprotkb": "Receptor-like serine/threonine-protein kinase NCRK; 2.7.11.1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28250)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;18088316;23111157;27862469", "class_list": "", "function": "", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWT1;Q9SL30", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0051020 GTPase binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005768 endosome;GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0010008 endosome membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0010089 xylem development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VYY5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYZ0-1", "uniprot_id": [ { "id": "ORTH2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYZ0", "type": "external" } ], "mass": 71467.0, "length": 645, "protein_name": "E3 ubiquitin-protein ligase ORTHRUS 2", "gene_name": "ORTH2", "organism": "Arabidopsis", "refseq_name": "Zinc finger (C3HC4-type RING finger) family protein", "refseq_ac": [ { "id": "NP_001319260", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319260", "type": "external" } ], "gene_names_uniprotkb": "ORTH2; F12K22.14; VIM1", "gene_names_refseq": "F12K22.14; F12K22_14; ORTH2; ORTHRUS 2; VARIANT IN METHYLATION 1; VIM1", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase ORTHRUS 2; 2.3.2.27; Protein VARIANT IN METHYLATION 1; RING-type E3 ubiquitin transferase ORTHRUS 2", "protein_names_refseq": "Zinc finger (C3HC4-type RING finger) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G57820)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11983057;14593172;17239600;17242155;18643997;18704160;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase. Participates in CpG methylation-dependent transcriptional regulation and epigenetic transcriptional silencing. Mediates ubiquitination with the E2 ubiquitin-conjugating enzyme UBC11. Promotes methylation-mediated gene silencing leading, for example, to early flowering. Associates with methylated DNA, and can bind to CpG, CpNpG, and CpNpN DNA motifs, with a strong preference for methylated forms, and with highest affinity for CpG substrate. Probably acts at the DNA methylation?histone interface to maintain centromeric heterochromatin., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3ECM8;Q9FVS3", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0008327 methyl-CpG binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0010369 chromocenter", "go_biological_process": "GO:0031508 pericentric heterochromatin formation;GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0006325 chromatin organization;GO:0044027 negative regulation of gene expression via chromosomal CpG island methylation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VYZ0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYZ5-1", "uniprot_id": [ { "id": "PWP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYZ5", "type": "external" } ], "mass": 100471.0, "length": 900, "protein_name": "Periodic tryptophan protein 2", "gene_name": "PWP2", "organism": "Arabidopsis", "refseq_name": "periodic tryptophan protein 2", "refseq_ac": [ { "id": "NP_172998", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172998", "type": "external" } ], "gene_names_uniprotkb": "PWP2; F9L1.40", "gene_names_refseq": "(PERIODIC TRYPTOPHAN PROTEIN 2; ATPWP2; F9L1.40; F9L1_40; PERIODIC TRYPTOPHAN PROTEIN 2; PWP2; periodic tryptophan protein 2", "protein_names_uniprotkb": "Periodic tryptophan protein 2; AtPWP2", "protein_names_refseq": "periodic tryptophan protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15440)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130712;14593172;18223036;18463617;19245862;19929880;20466843;23111157;23185391;23328941;23382868;23572148;23660473;23776212;25561503;26091701;26187819;27419465;27532006;27862469;30833711", "class_list": "", "function": "Involved in nucleolar processing of pre-18S ribosomal RNA. Plays a role early in ribosome biogenesis, especially in the maturation of 5.8S rRNA (PubMed:23382868). Required for guard cell functions (PubMed:23185391)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4HZM8;Q9XI24", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0034388 Pwp2p-containing subcomplex of 90S preribosome;GO:0005634 nucleus;GO:0005730 nucleolus;GO:0032040 small-subunit processome;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0009744 response to sucrose;GO:0006364 rRNA processing;GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0000028 ribosomal small subunit assembly;GO:0009553 embryo sac development", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q8VYZ5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ10-1", "uniprot_id": [ { "id": "SOQ1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ10", "type": "external" } ], "mass": 114402.0, "length": 1055, "protein_name": "Protein SUPPRESSOR OF QUENCHING 1, chloroplastic", "gene_name": "SOQ1", "organism": "Arabidopsis", "refseq_name": "haloacid dehalogenase-like hydrolase family protein", "refseq_ac": [ { "id": "NP_001321116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321116", "type": "external" } ], "gene_names_uniprotkb": "SOQ1; F13N6.21", "gene_names_refseq": "AT1G56505; F13N6.21; F13N6_21; SOQ1; suppressor of quenching 1", "protein_names_uniprotkb": "Protein SUPPRESSOR OF QUENCHING 1, chloroplastic; 3.1.3.-", "protein_names_refseq": "haloacid dehalogenase-like hydrolase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56500)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11910074;14593172;19423640;22223895;23818601;27862469", "class_list": "", "function": "Required to maintain light harvesting efficiency, especially during nonphotochemical quenching (NPQ) recovery, via the regulation of chlorophyll excited-state lifetime probably by preventing the formation of a slowly reversible form of antenna quenching., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8APV3;A0A1P8APY8;C0Z278;Q0WQ65;Q8GX08;Q8L9X3;Q9C7X1", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0010196 nonphotochemical quenching", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VZ10-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ17-1", "uniprot_id": [ { "id": "SUVH6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ17", "type": "external" } ], "mass": 87477.0, "length": 790, "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6", "gene_name": "SUVH6", "organism": "Arabidopsis", "refseq_name": "SU(VAR)3-9 homolog 6", "refseq_ac": [ { "id": "NP_850030", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850030", "type": "external" } ], "gene_names_uniprotkb": "SUVH6; SDG23; SET23; T9I22.18", "gene_names_refseq": "SDG23; SET DOMAIN PROTEIN 23; SU(VAR)3-9 homolog 6; SUVH6; T9I22.18; T9I22_18", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6; 2.1.1.-; 2.1.1.367; H3-K9-HMTase 6; Histone H3-K9 methyltransferase 6; Protein SET DOMAIN GROUP 23; Su(var)3-9 homolog protein 6; Suppressor of variegation 3-9 homolog protein 6", "protein_names_refseq": "SU(VAR)3-9 homolog 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22740)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11691919;14593172;15014946;16287862;16384625;27862469", "class_list": "", "function": "Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression. Seems to act preferentially on dsMRNA., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C5P2;Q9ZQ40", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" }, { "id": "2.1.1.367", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.367", "type": "external" }, { "id": "2.1.1.366", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.366", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003690 double-stranded DNA binding;GO:0008168 methyltransferase activity;GO:0008327 methyl-CpG binding;GO:0042054 histone methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VZ17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ20-1", "uniprot_id": [ { "id": "ASR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ20", "type": "external" } ], "mass": 34861.0, "length": 314, "protein_name": "Trihelix transcription factor ASR3", "gene_name": "ASR3", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": [ { "id": "NP_850213", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850213", "type": "external" } ], "gene_names_uniprotkb": "ASR3; F4P9.32", "gene_names_refseq": "F4P9.32; F4P9_32", "protein_names_uniprotkb": "Trihelix transcription factor ASR3; Protein ARABIDOPSIS SH4-RELATED3", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33550)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;21738689;23111157;23328941;25561503;25770109;27862469", "class_list": "", "function": "Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22805", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0050777 negative regulation of immune response", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VZ20-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ40-1", "uniprot_id": [ { "id": "PUB14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ40", "type": "external" } ], "mass": 69397.0, "length": 632, "protein_name": "U-box domain-containing protein 14", "gene_name": "PUB14", "organism": "Arabidopsis", "refseq_name": "plant U-box 14", "refseq_ac": [ { "id": "NP_191045", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191045", "type": "external" } ], "gene_names_uniprotkb": "PUB14; F28P10.170", "gene_names_refseq": "ATPUB14; PUB14; plant U-box 14", "protein_names_uniprotkb": "U-box domain-containing protein 14; 2.3.2.27; E3 ubiquitin-protein ligase PUB14; Plant U-box protein 14; Prototypical U-box domain protein 14; RING-type E3 ubiquitin transferase PUB14", "protein_names_refseq": "plant U-box 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54850)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;11495788;14593172;14657406;15231834;18552232;19962994;27862469;30833711", "class_list": "", "function": "Functions as an E3 ubiquitin ligase with specific E2 ubiquitin-conjugating enzymes. Undergoes auto-ubiquitination., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SV34", "ec_number_list": [], "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity;GO:0070696 transmembrane receptor protein serine/threonine kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8VZ40-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ52-1", "uniprot_id": [ { "id": "ATG10_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ52", "type": "external" } ], "mass": 25621.0, "length": 225, "protein_name": "Ubiquitin-like-conjugating enzyme ATG10", "gene_name": "ATG10", "organism": "Arabidopsis", "refseq_name": "autophagocytosis-associated family protein", "refseq_ac": [ { "id": "NP_850532", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850532", "type": "external" } ], "gene_names_uniprotkb": "ATG10; F21O3", "gene_names_refseq": "ATATG10; ATG10; autophagy 10", "protein_names_uniprotkb": "Ubiquitin-like-conjugating enzyme ATG10; 2.3.2.-; AtATG10; Autophagy-related protein 10", "protein_names_refseq": "autophagocytosis-associated family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G07525)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14593172;18245858;20085894;21332848;21395886;21645148;27862469", "class_list": "", "function": "E2-like enzyme involved in autophagy. Acts as an E2-like enzyme that catalyzes the conjugation of ATG12 to ATG5. The ATG12-ATG5 conjugates is required for the formation of autophagic vesicles and for the timely progression of senescence and programmed cell death (PCD). Likely serves as an ATG5-recognition molecule. Confers some resistance to nitrogen and carbon starvation. Is also involved in the formation of anthocyanic vacuolar inclusions (AVI). Promotes an autophagic process that constitutes a pro-survival mechanism by controlling the containment of host tissue-destructive microbial infections during necrotrophic pathogen infection, but negatively controls SA-dependent defenses and basal immunity to bacterial infection during biotrophic infection., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JEH1", "ec_number_list": [], "go_molecular_function": "GO:0019787 ubiquitin-like protein transferase activity;GO:0004839 ubiquitin activating enzyme activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane;GO:0000407 phagophore assembly site", "go_biological_process": "GO:0043482 cellular pigment accumulation;GO:0000045 autophagosome assembly;GO:0006914 autophagy;GO:0042742 defense response to bacterium;GO:0044804 nucleophagy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VZ52-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ56-1", "uniprot_id": [ { "id": "AMY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ56", "type": "external" } ], "mass": 47378.0, "length": 423, "protein_name": "Alpha-amylase 1", "gene_name": "AMY1", "organism": "Arabidopsis", "refseq_name": "alpha-amylase-like protein", "refseq_ac": [ { "id": "NP_567714", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567714", "type": "external" } ], "gene_names_uniprotkb": "AMY1; F13M23.140", "gene_names_refseq": "AMY1; ATAMY1; F13M23.140; F13M23_140; alpha-amylase-like", "protein_names_uniprotkb": "Alpha-amylase 1; 1,4-alpha-D-glucan glucanohydrolase; 3.2.1.1; AtAMY1", "protein_names_refseq": "alpha-amylase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25000)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;15347792;15637061;15927942;17324226;27862469;29659022", "class_list": "glycogene;glycosylhydrolase", "function": "Possesses alpha-amylase activity in vitro, but seems not required for breakdown of transitory starch in leaves., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBS5;Q9SW26", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0004556 alpha-amylase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0005987 sucrose catabolic process;GO:0009737 response to abscisic acid;GO:0009739 response to gibberellin", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VZ56-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ80-1", "uniprot_id": [ { "id": "PLT5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ80", "type": "external" } ], "mass": 58103.0, "length": 539, "protein_name": "Polyol transporter 5", "gene_name": "PLT5", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PLT5; MVE11.10; MVE11.22", "gene_names_refseq": "", "protein_names_uniprotkb": "Polyol transporter 5; AtPLT5; Protein POLYOL TRANSPORTER 5; Sugar-proton symporter PLT5", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18830)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10819329;14593172;15525644;15598803;16923188;25561503;27862469;28011693", "class_list": "", "function": "Plasma membrane broad-spectrum sugar-proton symporter. Mediates the uptake of linear polyols such as sorbitol, xylitol, erythritol or glycerol. Can transport the cyclic polyol myo-inositol and different hexoses, pentoses (including ribose), tetroses and sugar alcohols., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LS92", "ec_number_list": [], "go_molecular_function": "GO:0015168 glycerol transmembrane transporter activity;GO:0005351 carbohydrate:proton symporter activity;GO:0055056 D-glucose transmembrane transporter activity;GO:0005354 galactose transmembrane transporter activity;GO:0015145 monosaccharide transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0010311 lateral root formation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VZ80-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ87-1", "uniprot_id": [ { "id": "CB1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ87", "type": "external" } ], "mass": 28227.0, "length": 267, "protein_name": "Chlorophyll a-b binding protein 3, chloroplastic", "gene_name": "LHCB1.2", "organism": "Arabidopsis", "refseq_name": "chlorophyll A/B binding protein 3", "refseq_ac": [ { "id": "NP_564339", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564339", "type": "external" } ], "gene_names_uniprotkb": "LHCB1.2; AB180; CAB3; F1N18.5; LHCP-A", "gene_names_refseq": "AB180; CAB3; CELLULOSE SYNTHASE LIKE B3; CSLB3; F1N18.5; LHCB1.2; LIGHT HARVESTING CHLOROPHYLL A/B BINDING PROTEIN 1.2; chlorophyll A/B binding protein 3", "protein_names_uniprotkb": "Chlorophyll a-b binding protein 3, chloroplastic; CAB-180; Chlorophyll a-b protein 180; LHCII type I CAB-3", "protein_names_refseq": "chlorophyll A/B binding protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G29910); (ath:AT1G29920)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "11113141;11130712;14593172;19376835;27862469;3012462", "class_list": "", "function": "The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P04777;P83754", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0046872 metal ion binding;GO:0016168 chlorophyll binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009768 photosynthesis, light harvesting in photosystem I", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VZ87-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZC3-1", "uniprot_id": [ { "id": "AL121_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZC3", "type": "external" } ], "mass": 61773.0, "length": 556, "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial", "gene_name": "ALDH12A1", "organism": "Arabidopsis", "refseq_name": "aldehyde dehydrogenase 12A1", "refseq_ac": [ { "id": "NP_568955", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568955", "type": "external" } ], "gene_names_uniprotkb": "ALDH12A1; K19B1.14; P5CDH", "gene_names_refseq": "ALDH12A1; ARABIDOPSIS THALIANA DELTA1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE; ATP5CDH; DELTA1-PYROLINE-5-CARBOXYLATE DEHYDROGENASE; DELTA1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE; K19B1.14; K19B1_14; P5CDH; aldehyde dehydrogenase 12A1", "protein_names_uniprotkb": "Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial; 1.2.1.88; Aldehyde dehydrogenase family 12 member A1; AtP5CDH; L-glutamate gamma-semialdehyde dehydrogenase; P5C dehydrogenase", "protein_names_refseq": "aldehyde dehydrogenase 12A1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G62530)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11532180;14593172;15358267;15548746;19635803;26284090;27862469;9872454", "class_list": "", "function": "Plays a role in the inhibition of programmed cell death by converting the toxic proline catabolism intermediate (s)-1-pyrroline-5-carboxylate (P5C) to glutamate., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93Y55;Q9FJJ2", "ec_number_list": [ { "id": "1.2.1.88", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.1.88", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004029 aldehyde dehydrogenase (NAD+) activity;GO:0003842 L-glutamate gamma-semialdehyde dehydrogenase activity;GO:0050897 cobalt ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0009651 response to salt stress;GO:0072593 reactive oxygen species metabolic process;GO:0006560 proline metabolic process;GO:0010133 L-proline catabolic process to L-glutamate;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8VZC3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZD5-1", "uniprot_id": [ { "id": "KSG5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZD5", "type": "external" } ], "mass": 46074.0, "length": 410, "protein_name": "Shaggy-related protein kinase epsilon", "gene_name": "ASK5", "organism": "Arabidopsis", "refseq_name": "shaggy-like kinase 13", "refseq_ac": [ { "id": "NP_001329975", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329975", "type": "external" } ], "gene_names_uniprotkb": "ASK5; SK13; T15N1.130", "gene_names_refseq": "ATSK13; SHAGGY-LIKE KINASE 13; SK13; T15N1.130; T15N1_130; shaggy-like kinase 13", "protein_names_uniprotkb": "Shaggy-related protein kinase epsilon; 2.7.11.1; ASK-epsilon; AtSK13; Shaggy-related protein kinase 13", "protein_names_refseq": "shaggy-like kinase 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G14640)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130714;14593172;20466843;22074104;23111157;23328941;23572148;23660473;23776212;24601666;25561503;26091701;26187819;27532006;27862469;28011693;28575660;29167316;30833711", "class_list": "", "function": "May mediate extracellular signals to regulate transcription in differentiating cells., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LYJ6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0007165 signal transduction;GO:0030154 cell differentiation;GO:0046777 protein autophosphorylation;GO:0009651 response to salt stress;GO:0006972 hyperosmotic response", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8VZD5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZF1-1", "uniprot_id": [ { "id": "AEE7_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZF1", "type": "external" } ], "mass": 62956.0, "length": 569, "protein_name": "Acetate/butyrate--CoA ligase AAE7, peroxisomal", "gene_name": "AAE7", "organism": "Arabidopsis", "refseq_name": "acyl-activating enzyme 7", "refseq_ac": [ { "id": "NP_188316", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188316", "type": "external" } ], "gene_names_uniprotkb": "AAE7; ACN1; AMPBP7; K14A17.23", "gene_names_refseq": "AAE7; AC NON-UTILIZING 1; ACETATE NON-UTILIZING 1; ACN1; acyl-activating enzyme 7", "protein_names_uniprotkb": "Acetate/butyrate--CoA ligase AAE7, peroxisomal; 6.2.1.1; 6.2.1.2; AMP-binding protein 7; Acetyl-CoA synthetase; Acyl-activating enzyme 7; AtAMPBP7; Butyryl-CoA synthetase; Protein ACETATE NON-UTILIZING 1", "protein_names_refseq": "acyl-activating enzyme 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16910)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10819329;12177484;12805634;14593172;14963767;15533942;17951448;20863290;21557725;27862469", "class_list": "", "function": "Peroxisomal acetate/butyrate--CoA ligase that is probably involved in the activation of exogenous acetate for entry into the glyoxylate cycle. May play a role to prevent carbon loss from peroxisomes during lipid mobilization. In vitro, is active with both acetate and butyrate., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LSQ0", "ec_number_list": [ { "id": "6.2.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.1", "type": "external" }, { "id": "6.2.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.2", "type": "external" } ], "go_molecular_function": "GO:0003987 acetate-CoA ligase activity;GO:0031956 medium-chain fatty acid-CoA ligase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005829 cytosol", "go_biological_process": "GO:0006083 acetate metabolic process;GO:0019605 butyrate metabolic process;GO:0006097 glyoxylate cycle", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8VZF1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZG2-1", "uniprot_id": [ { "id": "HSR4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZG2", "type": "external" } ], "mass": 66136.0, "length": 576, "protein_name": "Protein HYPER-SENSITIVITY-RELATED 4", "gene_name": "HSR4", "organism": "Arabidopsis", "refseq_name": "cytochrome BC1 synthesi", "refseq_ac": [ { "id": "NP_190662", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190662", "type": "external" } ], "gene_names_uniprotkb": "HSR4; BCS1; F18B3.210", "gene_names_refseq": "AtBCS1; AtOM66; BCS1; OM66; Outer Mitochondrial membrane protein of 66 kDa; cytochrome BC1 synthesis", "protein_names_uniprotkb": "Protein HYPER-SENSITIVITY-RELATED 4; 3.6.1.-; AtHSR4; BCS1-like protein", "protein_names_refseq": "cytochrome BC1 synthesi", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50930)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10518009;11130713;14593172;15181213;15235117;16270229;16766691;18702669;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBK2;Q9SVK6", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005740 mitochondrial envelope;GO:0005741 mitochondrial outer membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0009411 response to UV;GO:0002237 response to molecule of bacterial origin;GO:0012501 programmed cell death;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8VZG2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZG7-1", "uniprot_id": [ { "id": "TSN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZG7", "type": "external" } ], "mass": 108235.0, "length": 991, "protein_name": "Ribonuclease TUDOR 1", "gene_name": "TSN1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "TSN1; T2I1.60", "gene_names_refseq": "", "protein_names_uniprotkb": "Ribonuclease TUDOR 1; 3.1.-.-; AtTudor1; TUDOR-SN protein 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G07350)", "pathway_count": 1, "publication_count": 32, "publication_id_list": "11130714;14593172;18433157;18463617;19245862;19376835;20374526;20396901;20466843;20484005;21768351;22060019;22223895;22631563;23111157;23172892;23328941;23572148;23660473;23776212;23820729;24601666;24924143;25205572;25736060;26091701;26187819;26237081;27532006;27862469;29167316;30833711", "class_list": "", "function": "Cytoprotective ribonuclease (RNase) required for resistance to abiotic stresses, acting as a positive regulator of mRNA decapping during stress (PubMed:25736060). Essential for the integrity and function of cytoplasmic messenger ribonucleoprotein (mRNP) complexes called stress granules (SGs) and processing bodies (PBs), sites of post-transcriptional gene regulation during stress (e.g. salt and heat) (PubMed:25736060). Involved in gibberellic acid (GA) biosynthesis (PubMed:25205572). Essential for stress tolerance, probably by regulating mRNAs entering the secretory pathway (PubMed:20484005). Component of stress granules (SGs) that regulates growth under salt stress by modulating levels of GA20OX3 mRNA. Binds GA20OX3 mRNA (PubMed:25205572). May inhibit the degradation of mRNAs involved in stress adaptation (PubMed:26237081)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4K6N0;Q9LY25", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0016787 hydrolase activity;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol", "go_biological_process": "GO:0006397 mRNA processing;GO:0034605 cellular response to heat;GO:0009651 response to salt stress;GO:0006402 mRNA catabolic process;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 3.3, "record_id": "Q8VZG7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZH2-1", "uniprot_id": [ { "id": "APM1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZH2", "type": "external" } ], "mass": 98179.0, "length": 879, "protein_name": "Aminopeptidase M1", "gene_name": "APM1", "organism": "Arabidopsis", "refseq_name": "aminopeptidase M1", "refseq_ac": [ { "id": "NP_195035", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195035", "type": "external" } ], "gene_names_uniprotkb": "APM1; F4I10_20", "gene_names_refseq": "AMINOPEPTIDASE M1; APM1; ATAPM1; F4I10.20; F4I10_20; aminopeptidase M1", "protein_names_uniprotkb": "Aminopeptidase M1; 3.4.11.2; Alpha-aminoacylpeptide hydrolase", "protein_names_refseq": "aminopeptidase M1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33090)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11891249;14593172;19531600;20154099;23065197;27862469", "class_list": "", "function": "Metallopeptidase that binds to the auxin transport inhibitor N-1-naphthylphthalamic acid (NPA). Required for embryonic and seedling development as well as cell cycle progression. Homodimerization is required to proper localization and activity. May play a negative role in the regulation of PIN auxin transport proteins., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WG9;Q9SN00", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004177 aminopeptidase activity;GO:0070006 metalloaminopeptidase activity;GO:0016285 alanyl aminopeptidase activity;GO:0010013 N-1-naphthylphthalamic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0043171 peptide catabolic process;GO:0009926 auxin polar transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VZH2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZI9-1", "uniprot_id": [ { "id": "ENAP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZI9", "type": "external" } ], "mass": 28386.0, "length": 249, "protein_name": "Trihelix transcription factor ENAP1", "gene_name": "ENAP1", "organism": "Arabidopsis", "refseq_name": "sequence-specific DNA binding transcription factor", "refseq_ac": [ { "id": "NP_566386", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566386", "type": "external" } ], "gene_names_uniprotkb": "ENAP1; F11B9.6; F9F8.9; VFP3", "gene_names_refseq": "", "protein_names_uniprotkb": "Trihelix transcription factor ENAP1; Agrobacterium tumefaciens VirF-interacting protein 3; EIN2 nuclear associated protein 1; Trihelix DNA-binding protein ENAP1", "protein_names_refseq": "sequence-specific DNA binding transcription factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G11100)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;14593172;20466843;22223895;23111157;25561503;26571494;27694846;27862469;28011693;28874528;29298835;29654922;30338215", "class_list": "", "function": "Transcription regulator (PubMed:26571494). Associates with chromatin regions that are associated with ethylene-responses in absence and in presence of ethylene (PubMed:28874528). In the presence of ethylene, promotes histone acetylation in an EIN2- and EIN3-dependent manner, mainly on H3K14 and H3K23, thus regulating positively ethylene-responsive genes (PubMed:27694846, PubMed:28874528)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LF33;Q9C781;Q9SRL9", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010468 regulation of gene expression;GO:0040029 epigenetic regulation of gene expression;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8VZI9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZK0-1", "uniprot_id": [ { "id": "MIEL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZK0", "type": "external" } ], "mass": 30983.0, "length": 267, "protein_name": "E3 ubiquitin-protein ligase MIEL1", "gene_name": "MIEL1", "organism": "Arabidopsis", "refseq_name": "CHY-type/CTCHY-type/RING-type Zinc finger protein", "refseq_ac": [ { "id": "NP_197366", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197366", "type": "external" } ], "gene_names_uniprotkb": "MIEL1; PILP1; T1A4.30", "gene_names_refseq": "MIEL1; MYB30-Interacting E3 Ligase 1; T1A4.30; T1A4_30", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase MIEL1; 2.3.2.27; AtPILP1; MYB30-interacting E3 ligase 1; Pirh2-like protein 1; RING-type E3 ubiquitin transferase MIEL1", "protein_names_refseq": "CHY-type/CTCHY-type/RING-type Zinc finger protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18650)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;21526181;23403577;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase that acts as a regulator of cell death and defense. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Attenuates the activation of defense and related cell death responses in the absence of pathogens by mediating ubiquitination and subsequent proteasomal degradation of MYB30., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006952 defense response;GO:0016567 protein ubiquitination;GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process;GO:0006511 ubiquitin-dependent protein catabolic process;GO:1900425 negative regulation of defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VZK0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZP1-1", "uniprot_id": [ { "id": "GPP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZP1", "type": "external" } ], "mass": 26780.0, "length": 240, "protein_name": "(DL)-glycerol-3-phosphatase 2", "gene_name": "GPP2", "organism": "Arabidopsis", "refseq_name": "Haloacid dehalogenase-like hydrolase (HAD) superfamily protein", "refseq_ac": [ { "id": "NP_568858", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568858", "type": "external" } ], "gene_names_uniprotkb": "GPP2; GS1; MSF19; MUA2.2", "gene_names_refseq": "GLYCEROL-3-PHOSPHATASE 2; GPP2; GS1; MUA2.2; MUA2_2", "protein_names_uniprotkb": "(DL)-glycerol-3-phosphatase 2; 3.1.3.21; Glycerol-1-phosphatase 2; Haloacid dehalogenase-like hydrolase domain-containing protein GPP2", "protein_names_refseq": "Haloacid dehalogenase-like hydrolase (HAD) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57440)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "14593172;17136424;27862469;9679202", "class_list": "", "function": "Acts as a glycerol-3-phosphatase with higher stereospecificity for L-glycerol-3-phosphate than DL-glycerol-3-phosphate., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FKM6", "ec_number_list": [ { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" }, { "id": "3.1.3.104", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.104", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000121 sn-glycerol 1-phosphatase activity;GO:0043136 sn-glycerol 3-phosphatase activity;GO:0050308 sugar-phosphatase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0016311 dephosphorylation;GO:0006114 glycerol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8VZP1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZQ2-1", "uniprot_id": [ { "id": "MYB61_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZQ2", "type": "external" } ], "mass": 40891.0, "length": 366, "protein_name": "Transcription factor MYB61", "gene_name": "MYB61", "organism": "Arabidopsis", "refseq_name": "myb domain protein 61", "refseq_ac": [ { "id": "NP_172425", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172425", "type": "external" } ], "gene_names_uniprotkb": "MYB61; F14J9.20", "gene_names_refseq": "ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 61; ATMYB61; F14J9.20; F14J9_20; MYB61; myb domain protein 61", "protein_names_uniprotkb": "Transcription factor MYB61; AtMYB61; Myb-related protein 61", "protein_names_refseq": "myb domain protein 61", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09540)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;16005292;19401413;22060019;22708996;23741471;27862469;28207974;9839469", "class_list": "", "function": "Transcription factor that coordinates a small network of downstream target genes required for several aspects of plant growth and development, such as xylem formation and xylem cell differentiation, and lateral root formation (PubMed:22708996). Regulates a specific set of target genes by binding DNA to the AC cis-element 5'-ACCTAC-3' (PubMed:23741471). Functions as a transcriptional regulator of stomatal closure. Plays a role the regulation of stomatal pore size independently of abscisic acid (ABA) (PubMed:16005292). Required for seed coat mucilage deposition during the development of the seed coat epidermis (PubMed:19401413). Involved in the induction of trichome initiation and branching by positively regulating GL1 and GL2. Required for gibberellin (GA) biosynthesis and degradation by positively affecting the expression of the enzymes that convert GA9 into the bioactive GA4, as well as the enzymes involved in the degradation of GA4 (PubMed:28207974)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SAV9;Q9SBF9", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010087 phloem or xylem histogenesis;GO:0010089 xylem development;GO:0010119 regulation of stomatal movement", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8VZQ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZR6-1", "uniprot_id": [ { "id": "INT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZR6", "type": "external" } ], "mass": 54813.0, "length": 509, "protein_name": "Inositol transporter 1", "gene_name": "INT1", "organism": "Arabidopsis", "refseq_name": "inositol transporter 1", "refseq_ac": [ { "id": "NP_850393", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850393", "type": "external" } ], "gene_names_uniprotkb": "INT1; T1O24.7", "gene_names_refseq": "ATINT1; INOSITOL TRANSPORTER 1; INT1; T1O24.7; inositol transporter 1", "protein_names_uniprotkb": "Inositol transporter 1", "protein_names_refseq": "inositol transporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43330)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;16603666;16923188;18441213;22253225;27862469", "class_list": "", "function": "Vacuolar inositol-proton symporter involved in the release of myo-inositol from vacuoles. Not involved in glucose or fructose transport., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22848", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0005366 myo-inositol:proton symporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0016020 membrane;GO:0000325 plant-type vacuole;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0015798 myo-inositol transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VZR6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZS0-1", "uniprot_id": [ { "id": "PNC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZS0", "type": "external" } ], "mass": 35159.0, "length": 321, "protein_name": "Peroxisomal adenine nucleotide carrier 2", "gene_name": "PNC2", "organism": "Arabidopsis", "refseq_name": "peroxisomal adenine nucleotide carrier 2", "refseq_ac": [ { "id": "NP_198104", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198104", "type": "external" } ], "gene_names_uniprotkb": "PNC2; F15A18; F21A20.230", "gene_names_refseq": "AtPNC2; F21A20.230; F21A20_230; PNC2; peroxisomal adenine nucleotide carrier 2", "protein_names_uniprotkb": "Peroxisomal adenine nucleotide carrier 2", "protein_names_refseq": "peroxisomal adenine nucleotide carrier 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G27520)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;19073762;19073763;27862469", "class_list": "", "function": "Peroxisomal adenine nucleotide transporter catalyzing the counterexchange of ATP with AMP. ATP is needed by reactions that generate acyl-CoA for peroxisomal fatty acid beta-oxidation during postgerminative growth. Required for the beta-oxidation reactions involved in auxin biosynthesis and for the conversion of seed-reserved triacylglycerols into sucrose that is necessary for growth before the onset of photosynthesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015297 antiporter activity;GO:0005347 ATP transmembrane transporter activity;GO:0015217 ADP transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005778 peroxisomal membrane", "go_biological_process": "GO:0006635 fatty acid beta-oxidation;GO:0007031 peroxisome organization;GO:0015866 ADP transport;GO:0015867 ATP transport;GO:0080024 indolebutyric acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VZS0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZS9-1", "uniprot_id": [ { "id": "FZR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZS9", "type": "external" } ], "mass": 52330.0, "length": 475, "protein_name": "Protein FIZZY-RELATED 1", "gene_name": "FZR1", "organism": "Arabidopsis", "refseq_name": "cell cycle switch protein 52 A2", "refseq_ac": [ { "id": "NP_192929", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192929", "type": "external" } ], "gene_names_uniprotkb": "FZR1; CCS52A2; CDH1-1; T26M18.130", "gene_names_refseq": "CCS52A2; FIZZY-RELATED 1; FZR1; T26M18.130; T26M18_130; cell cycle switch protein 52 A2", "protein_names_uniprotkb": "Protein FIZZY-RELATED 1; Cell cycle switch protein CCS52A2", "protein_names_refseq": "cell cycle switch protein 52 A2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11920)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;12597875;14593172;15970679;19553203;21087491;21687678;22844260;27862469", "class_list": "", "function": "Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Required for meristem organization and maintenance of quiescent center identity and stem cells., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9T060", "ec_number_list": [], "go_molecular_function": "GO:0010997 anaphase-promoting complex binding;GO:1990757 ubiquitin ligase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0032877 positive regulation of DNA endoreduplication;GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process;GO:0008361 regulation of cell size", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8VZS9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZU3-1", "uniprot_id": [ { "id": "SCP19_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZU3", "type": "external" } ], "mass": 52579.0, "length": 465, "protein_name": "Serine carboxypeptidase-like 19", "gene_name": "SCPL19", "organism": "Arabidopsis", "refseq_name": "serine carboxypeptidase-like 19", "refseq_ac": [ { "id": "NP_568215", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568215", "type": "external" } ], "gene_names_uniprotkb": "SCPL19; F17I14.170; MTH16.5; SCT; SNG2", "gene_names_refseq": "F17I14.170; F17I14_170; SCPL19; SINAPOYLGLUCOSE ACCUMULATOR 2; SNG2; serine carboxypeptidase-like 19", "protein_names_uniprotkb": "Serine carboxypeptidase-like 19; 2.3.1.91; Protein SINAPOYLGLUCOSE ACCUMULATOR 2; SCT; Sinapoylglucose--choline O-sinapoyltransferase", "protein_names_refseq": "serine carboxypeptidase-like 19", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09640)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10470850;11130714;11696189;12657648;14593172;15908604;17094968;17600138;18515127;22762247;27862469", "class_list": "", "function": "Involved in plants secondary metabolism. Functions as acyltransferase to form the sinapate ester sinapoylcholine also known as sinapine. Able to convert in vitro benzoylglucose into benzoylcholine., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q941P1;Q9FXX7;Q9LXC8", "ec_number_list": [ { "id": "2.3.1.91", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.91", "type": "external" } ], "go_molecular_function": "GO:0004185 serine-type carboxypeptidase activity;GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups;GO:0016752 sinapoyltransferase activity;GO:0047202 sinapoylglucose-choline O-sinapoyltransferase activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006508 proteolysis;GO:0019748 secondary metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8VZU3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A1P8ASI5-1", "uniprot_id": [ { "id": "A0A1P8ASI5_ARATH", "url": "https://www.uniprot.org/uniprot/A0A1P8ASI5", "type": "external" } ], "mass": 112845.0, "length": 1029, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "T6H22.9; T6H22_9", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T6H22.9; T6H22_9", "gene_names_refseq": "", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56120)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0016020 membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0045088 regulation of innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A1P8ASI5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M8Y0-1", "uniprot_id": [ { "id": "SEC_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M8Y0", "type": "external" } ], "mass": 110114.0, "length": 977, "protein_name": "Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC", "gene_name": "SEC", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": [ { "id": "NP_187074", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187074", "type": "external" } ], "gene_names_uniprotkb": "SEC; T6K12.14; T6K12_14; secret agent", "gene_names_refseq": "SEC; T6K12.14; T6K12_14; secret agent", "protein_names_uniprotkb": "Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; 2.4.1.255; Protein SECRET AGENT", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G04240)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;12136030;14593172;16014901;22267487;26773002;27862469;30150325;38336175", "class_list": "glycogene;glycosyltransferase", "function": "O-linked N-acetylglucosamine transferase (OGT) that mediates O-glycosylation of capsid protein (CP) of virus in case of infection by Plum pox virus (PubMed:16014901). OGTs catalyze the addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine (PubMed:16014901). Probably acts by adding O-linked sugars to yet unknown proteins. Its OGT activity has been proved in vitro but not in vivo (PubMed:12136030). Required with SPY for gamete and seed development (PubMed:16014901). Mediates O-glycosylation of the DELLA protein RGA, a repressor of the gibberellin (GA) signaling pathway (PubMed:26773002). O-glycosylation by SEC inhibits RGA binding to four of its interactors PIF3, PIF4, JAZ1, and BZR1 that are key regulators in light, jasmonate, and brassinosteroid signaling pathways, respectively (PubMed:26773002). Activates ATX1 through O-GlcNAc modification to augment ATX1-mediated H3K4me3 histone epigenetic modification at FLC locus, thus preventing premature flowering (PubMed:30150325)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.1.221", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.221", "type": "external" }, { "id": "2.4.1.255", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.255", "type": "external" } ], "go_molecular_function": "GO:0097363 protein O-acetylglucosaminyltransferase activity;GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006493 protein O-linked glycosylation;GO:0009910 negative regulation of flower development;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q9M8Y0-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0100000000000.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M9L0-1", "uniprot_id": [ { "id": "APC11_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M9L0", "type": "external" } ], "mass": 9738.0, "length": 84, "protein_name": "Anaphase-promoting complex subunit 11", "gene_name": "APC11", "organism": "Arabidopsis", "refseq_name": "anaphase-promoting complex/cyclosome 11", "refseq_ac": [ { "id": "NP_001189819", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189819", "type": "external" } ], "gene_names_uniprotkb": "APC11; F10A16.17; F10A16_17", "gene_names_refseq": "APC11; F10A16.17; F10A16_17; anaphase-promoting complex/cyclosome 11", "protein_names_uniprotkb": "Anaphase-promoting complex subunit 11; Cyclosome subunit 11", "protein_names_refseq": "anaphase-promoting complex/cyclosome 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G05870)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14508008;26657562;27862469", "class_list": "", "function": "Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication. May recruit the E2 ubiquitin-conjugating enzymes to the complex (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4J9K5;Q940X6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0097602 cullin family protein binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0051301 cell division;GO:0007346 regulation of mitotic cell cycle;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process;GO:0045842 positive regulation of mitotic metaphase/anaphase transition", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9M9L0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W2F3-1", "uniprot_id": [ { "id": "PIF4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W2F3", "type": "external" } ], "mass": 48363.0, "length": 430, "protein_name": "Transcription factor PIF4", "gene_name": "PIF4", "organism": "Arabidopsis", "refseq_name": "phytochrome interacting factor 4", "refseq_ac": [ { "id": "NP_565991", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565991", "type": "external" } ], "gene_names_uniprotkb": "PIF4; AtPIF4; BHLH9; EN102; MFL8.13; MFL8_13; SRL2", "gene_names_refseq": "AtPIF4; MFL8.13; MFL8_13; PIF4; SRL2; phytochrome interacting factor 4", "protein_names_uniprotkb": "Transcription factor PIF4; AtbHLH9; Basic helix-loop-helix protein 9; Phytochrome-interacting factor 4; Short under red-light 2; Transcription factor EN 102; bHLH 9; bHLH transcription factor bHLH009", "protein_names_refseq": "phytochrome interacting factor 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43010)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617197;12006496;12679534;12826627;12897250;14593172;17614917;20093430;23224238;23708772;25561503;25944101;26724867;27862469;30635559;31527236;33824329;36063057", "class_list": "", "function": "Transcription factor acting negatively in the phytochrome B signaling pathway. May regulate the expression of a subset of genes involved in cell expansion by binding to the G-box motif (By similarity). Activated by CRY1 and CRY2 in response to low blue light (LBL) by direct binding at chromatin on E-box variant 5'-CA[CT]GTG-3' to stimulate specific gene expression to adapt global physiology (e.g. hypocotyl elongation in low blue light) (PubMed:26724867). Element of a PIF4/HMR/MED14-dependent thermoresponsive process; collaboratively with its transcriptional coactivator PTAC12/HMR/PAP5, involved in the regulation of thermoresponsive growth-relevant genes (e.g. mainly involved in biosynthesis and signaling of the phytohormone auxin) leading to daytime warm temperature elicitation of MED14-dependent thermomorphogenesis (e.g. hypocotyl elongation) (PubMed:30635559, PubMed:33824329, PubMed:36063057)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5Y7D4;A5Y7D5;A5Y7D6;A5Y7D7;A5Y7D8;A5Y7D9;A5Y7E0;A5Y7E1;A5Y7E2;A5Y7E3;A5Y7E4;A5Y7E5;A5Y7E6;A5Y7E7;Q9C5I8;Q9SKX6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0009409 response to cold;GO:0009266 response to temperature stimulus;GO:0009408 response to heat", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8W2F3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SCU7-1", "uniprot_id": [ { "id": "MYB30_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SCU7", "type": "external" } ], "mass": 35919.0, "length": 323, "protein_name": "Transcription factor MYB30", "gene_name": "MYB30", "organism": "Arabidopsis", "refseq_name": "myb domain protein 30", "refseq_ac": [ { "id": "NP_189533", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189533", "type": "external" } ], "gene_names_uniprotkb": "MYB30; ATMYB30; MLD15.8; hsr1; myb domain protein 30", "gene_names_refseq": "ATMYB30; MYB30; myb domain protein 30", "protein_names_uniprotkb": "Transcription factor MYB30; AtMYB30; Myb-related protein 30", "protein_names_refseq": "myb domain protein 30", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G28910)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10571865;10907853;10929106;11130713;12119395;14593172;16463103;16730712;18326828;19170933;20696912;21917550;22814374;23403577;23596456;24583075;24587042;27862469", "class_list": "", "function": "Transcription factor that binds specifically to the DNA sequence 5'-AACAAAC-3' (PubMed:19170933). Acts as a positive regulator of hypersensitive cell death (PubMed:10571865, PubMed:12119395). Acts as a positive regulator of salicylic acid synthesis (PubMed:16730712). Regulates very-long-chain fatty acid biosynthesis (PubMed:18326828). Acts cooperatively with BZR2 to promote expression of a subset of brassinosteroids target genes (PubMed:19170933). Transcriptional activity and hypersensitive response control negatively regulated by PLA2-ALPHA (PubMed:20696912). Involved in the regulation of abscisic acid (ABA) signaling (PubMed:22814374). Increased levels of MYB30 can accelerate flowering both in long and short days through the regulation of FT (PubMed:24587042)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:1990837 sequence-specific double-stranded DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0001666 response to hypoxia;GO:0009617 response to bacterium;GO:0009644 response to high light intensity;GO:0042761 very long-chain fatty acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q9SCU7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4I7-1", "uniprot_id": [ { "id": "CDPKD_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4I7", "type": "external" } ], "mass": 59376.0, "length": 528, "protein_name": "Calcium-dependent protein kinase 13", "gene_name": "CPK13", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 13", "refseq_ac": [ { "id": "NP_190753", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190753", "type": "external" } ], "gene_names_uniprotkb": "CPK13; ATEM1.10", "gene_names_refseq": "CPK13; calcium-dependent protein kinase 13", "protein_names_uniprotkb": "Calcium-dependent protein kinase 13; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51850)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10645728;11130713;12068094;12805596;14593172;15308754;17317660;17651370;18686298;19029837;19245862;19376835;21768351;23572148;25561503;26091701;27419465;27862469;28011693;30833711", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q570G8;Q96294", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q8W4I7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A51-1", "uniprot_id": [ { "id": "PUB32_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A51", "type": "external" } ], "mass": 91593.0, "length": 805, "protein_name": "U-box domain-containing protein 32", "gene_name": "PUB32", "organism": "Arabidopsis", "refseq_name": "U-box domain-containing protein kinase family protein", "refseq_ac": [ { "id": "NP_566915", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566915", "type": "external" } ], "gene_names_uniprotkb": "PUB32; T2J13.100", "gene_names_refseq": "", "protein_names_uniprotkb": "U-box domain-containing protein 32; 2.3.2.27; Plant U-box protein 32; RING-type E3 ubiquitin transferase PUB32", "protein_names_refseq": "U-box domain-containing protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G49060)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;11495788;14593172;17317660;25561503;27862469;30833711", "class_list": "", "function": "Functions as an E3 ubiquitin ligase., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67YL5;Q67YP5;Q9SMU3", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q94A51-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LK95-1", "uniprot_id": [ { "id": "MYB21_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LK95", "type": "external" } ], "mass": 25351.0, "length": 226, "protein_name": "Transcription factor MYB21", "gene_name": "MYB21", "organism": "Arabidopsis", "refseq_name": "myb domain protein 21", "refseq_ac": [ { "id": "NP_189418", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189418", "type": "external" } ], "gene_names_uniprotkb": "MYB21; ATMYB21; ATMYB3; MGF10.23; MYB3; myb domain protein 21", "gene_names_refseq": "ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3; AT3G27812; ATMYB21; ATMYB3; MYB21; myb domain protein 21", "protein_names_uniprotkb": "Transcription factor MYB21; AtMYB21; AtMyb3; Myb homolog 3; Myb-related protein 21", "protein_names_refseq": "myb domain protein 21", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G27810)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10819329;10907853;11130713;11910074;11967090;15208423;16463103;16805732;19091873;19325888;21447791;27862469;9839469", "class_list": "", "function": "Transcription factor involved in photomorphogenesis in the light. May act downstream of the light receptor network and directly affects transcription of light-induced genes. In darkness, its probable degradation prevent the activation of light-induced genes. Required to activate expression of PAL. Acts redundantly with MYB24 and MYB57 to control stamen filament elongation in the late developed flowers. Contributes with MYB24 to induction of MYB108 by jasmonate. Repressed at the transcript levels by DELLA proteins., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SVD2;O22684;Q9SBG4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding;GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009585 red, far-red light phototransduction;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9LK95-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9S736-1", "uniprot_id": [ { "id": "OBE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9S736", "type": "external" } ], "mass": 64159.0, "length": 566, "protein_name": "Protein OBERON 1", "gene_name": "OBE1", "organism": "Arabidopsis", "refseq_name": "potyvirus VPg interacting protein (DUF1423)", "refseq_ac": [ { "id": "NP_001326896", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326896", "type": "external" } ], "gene_names_uniprotkb": "OBE1; F17A17.12; MLP3.23; OBERON1; PVIP2", "gene_names_refseq": "OBE1; OBERON1", "protein_names_uniprotkb": "Protein OBERON 1; Potyvirus VPg-interacting protein 2", "protein_names_refseq": "potyvirus VPg interacting protein (DUF1423)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G07780)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130713;14593172;14963126;18403411;19392692;22378640;23111157;25561503;27862469;28011693;30338215", "class_list": "", "function": "Probable transcription factor that acts together with OBE2 for the maintenance and/or establishment of both the shoot and root meristems, probably by controlling the expression of the meristem genes such as WUS, PLT1 and PLT2 and of genes required for auxin responses. Promotes cell meristematic activity via the WUSCHEL-CLAVATA pathway. Involved in the development of the basal pole and in auxin-mediated root and vascular development in the embryo. Confers sensitivity to turnip mosaic virus (TuMV) probably by promoting viral movement and multiplication via interaction with TuMV VPg., [UniProtKB, PubMed, PubMed]; Probable transcription factor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0000792 heterochromatin;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010468 regulation of gene expression;GO:0031347 regulation of defense response;GO:0009793 embryo development ending in seed dormancy;GO:0010071 root meristem specification", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q9S736-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LSE2-1", "uniprot_id": [ { "id": "ICE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LSE2", "type": "external" } ], "mass": 53539.0, "length": 494, "protein_name": "Transcription factor ICE1", "gene_name": "ICE1; SCRM", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_001030774", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030774", "type": "external" } ], "gene_names_uniprotkb": "ICE1; SCRM; ATICE1; BHLH116; EN45; ICE1; INDUCER OF CBF EXPRESSION 1; MDJ14.1; MLJ15.14; SCREAM; SCRM", "gene_names_refseq": "A. THALIANA INDUCER OF CBP EXPRESSION 1; ATICE1; ICE1; INDUCER OF CBF EXPRESSION 1; SCREAM; SCRM", "protein_names_uniprotkb": "Transcription factor ICE1; AtbHLH116; Basic helix-loop-helix protein 116; Inducer of CBF expression 1; Transcription factor EN 45; Transcription factor SCREAM; bHLH 116; bHLH transcription factor bHLH116", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G26744)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10819329;11130713;12672693;12679534;12897250;14593172;14600211;16702557;17416732;18641265;22960247;27862469;28507175", "class_list": "", "function": "Transcriptional activator that regulates the cold-induced transcription of CBF/DREB1 genes. Binds specifically to the MYC recognition sites (5'-CANNTG-3') found in the CBF3/DREB1A promoter. Mediates stomatal differentiation in the epidermis probably by controlling successive roles of SPCH, MUTE, and FAMA. Functions as a dimer with SPCH during stomatal initiation (PubMed:18641265, PubMed:28507175)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WR77;Q2V3S3;Q5PNR8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9LSE2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZC9-1", "uniprot_id": [ { "id": "GLAK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZC9", "type": "external" } ], "mass": 40076.0, "length": 362, "protein_name": "Glucuronokinase 1", "gene_name": "GLCAK1; GLCAK", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "GLCAK1; GLCAK; ATGLCAK; F4P13.18; F4P13_18; glucuronokinase G", "gene_names_refseq": "", "protein_names_uniprotkb": "Glucuronokinase 1; 2.7.1.43; AtGlcAK1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01640)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;19951951;27862469", "class_list": "", "function": "Sugar-1-kinase with a strict substrate specificity for D-glucuronic acid and ATP. Involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. May be also involved in a salvage pathway for glucuronic acid., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SS91", "ec_number_list": [ { "id": "2.7.1.43", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.43", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0008266 poly(U) RNA binding;GO:0047940 glucuronokinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006020 inositol metabolic process;GO:0042546 cell wall biogenesis;GO:0048868 pollen tube development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q93ZC9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W035-1", "uniprot_id": [ { "id": "FPGS3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W035", "type": "external" } ], "mass": 55167.0, "length": 492, "protein_name": "Folylpolyglutamate synthase", "gene_name": "DFD; FPGS3", "organism": "Arabidopsis", "refseq_name": "DHFS-FPGS homolog D", "refseq_ac": [ { "id": "NP_567026", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567026", "type": "external" } ], "gene_names_uniprotkb": "DFD; FPGS3; ATDFD; DFD; DHFS-FPGS homolog D; F1I16_40; FPGS3; FPGS4; FPGSD", "gene_names_refseq": "ATDFD; DFD; DHFS-FPGS homolog D; FPGS3; folylpolyglutamate synthetase 3", "protein_names_uniprotkb": "Folylpolyglutamate synthase; 6.3.2.17; DHFS-FPGS homolog D; FPGS; Folylpoly-gamma-glutamate synthetase; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase", "protein_names_refseq": "DHFS-FPGS homolog D", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55630)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;11752472;14593172;21070407;21233333;22223895;27862469", "class_list": "", "function": "Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IWY4;Q8LD20;Q93Y54;Q9M059", "ec_number_list": [ { "id": "6.3.2.17", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.2.17", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004326 tetrahydrofolylpolyglutamate synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0006730 one-carbon metabolic process;GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W035-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SGA0-1", "uniprot_id": [ { "id": "ACR6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SGA0", "type": "external" } ], "mass": 48742.0, "length": 433, "protein_name": "ACT domain-containing protein ACR6", "gene_name": "ACR6", "organism": "Arabidopsis", "refseq_name": "ACT domain repeat 6", "refseq_ac": [ { "id": "NP_001319446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319446", "type": "external" } ], "gene_names_uniprotkb": "ACR6; ACT domain repeat 6; F1C9.23; F1C9_23; F28J7.32", "gene_names_refseq": "ACR6; ACT domain repeat 6; F1C9.23; F1C9_23", "protein_names_uniprotkb": "ACT domain-containing protein ACR6; Protein ACT DOMAIN REPEATS 6", "protein_names_refseq": "ACT domain repeat 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01990)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;11910074;12481063;14593172;23660473;27862469", "class_list": "", "function": "Binds amino acids., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]; May bind amino acids., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SGI1", "ec_number_list": [], "go_molecular_function": "GO:0016597 amino acid binding", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9SGA0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4B2-1", "uniprot_id": [ { "id": "APEM9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4B2", "type": "external" } ], "mass": 37467.0, "length": 333, "protein_name": "Protein APEM9", "gene_name": "APEM9", "organism": "Arabidopsis", "refseq_name": "3-phosphoinositide-dependent protein kinase-1", "refseq_ac": [ { "id": "NP_850555", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850555", "type": "external" } ], "gene_names_uniprotkb": "APEM9; DAU; F18K10.16", "gene_names_refseq": "ABERRANT PEROXISOME MORPHOLOGY 9; APEM9", "protein_names_uniprotkb": "Protein APEM9; ABERRANT PEROXISOME MORPHOLOGY 9; Protein DAYU", "protein_names_refseq": "3-phosphoinositide-dependent protein kinase-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10572)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14593172;21487094;24510720;27862469", "class_list": "", "function": "Involved in peroxisome biogenesis and matrix protein import (PubMed:24510720). Required for pollen maturation and in vivo germination via its role in peroxisomal function, which partially involves jasmonic acid biosynthesis (PubMed:24510720). Transported to peroxisomes via the interaction with PEX19-1 (PubMed:21487094). Required for peroxisomal protein import by acting as an anchoring protein for the AAA ATPase complex, which consists of PEX1 and PEX6 (PubMed:21487094)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LPP1", "ec_number_list": [], "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005778 peroxisomal membrane", "go_biological_process": "GO:0015919 peroxisomal membrane transport;GO:0043574 peroxisomal transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W4B2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W1Y3-1", "uniprot_id": [ { "id": "KN14F_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W1Y3", "type": "external" } ], "mass": 121149.0, "length": 1087, "protein_name": "Kinesin-like protein KIN-14F", "gene_name": "KIN14F; KP1", "organism": "Arabidopsis", "refseq_name": "kinesin-like protein 1", "refseq_ac": [ { "id": "NP_001319684", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319684", "type": "external" } ], "gene_names_uniprotkb": "KIN14F; KP1; ATKP1; AtKIN14h; KP1; T32N15.10; kinesin-like protein 1", "gene_names_refseq": "ARABIDOPSIS KINESIN-LIKE PROTEIN 1; ATKP1; AtKIN14h; KP1; kinesin-like protein 1", "protein_names_uniprotkb": "Kinesin-like protein KIN-14F; AtKIN14h; AtKP1; Kinesin KP1; Kinesin-like protein 1", "protein_names_refseq": "kinesin-like protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G44730)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;11472632;16212879;16448571;19669906;21406623;22038119;22060019;25561503;27862469", "class_list": "", "function": "Required for keeping the ATP levels stable and balancing the aerobic respiration pathways during seed germination at low temperature., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4J373;O22240", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005874 microtubule;GO:0015630 microtubule cytoskeleton", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0009060 aerobic respiration;GO:0007017 microtubule-based process;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8W1Y3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YU5-1", "uniprot_id": [ { "id": "SEC8_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YU5", "type": "external" } ], "mass": 116605.0, "length": 1053, "protein_name": "Exocyst complex component SEC8", "gene_name": "SEC8", "organism": "Arabidopsis", "refseq_name": "subunit of exocyst complex 8", "refseq_ac": [ { "id": "NP_566372", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566372", "type": "external" } ], "gene_names_uniprotkb": "SEC8; ATSEC8; F14P13.2; SUBUNIT OF EXOCYST COMPLEX 8; subunit of exocyst complex 8", "gene_names_refseq": "ATSEC8; SEC8; SUBUNIT OF EXOCYST COMPLEX 8; subunit of exocyst complex 8", "protein_names_uniprotkb": "Exocyst complex component SEC8; AtSec8; Exocyst complex component 4", "protein_names_refseq": "subunit of exocyst complex 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10380)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "11130713;11910074;14593172;16040664;18492870;19376835;19895414;20618910;20870962;21768351;22060019;22631563;23111157;23572148;23660473;23776212;24307681;24601666;25561503;26091701;27419465;27862469;29167316;29654922;30833711", "class_list": "", "function": "Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane., [UniProtKB, UniProtKB, UniProtKB]; Participates in polarized pectin delivery required for the polarized development of the mucilage-producing volcano cells of the seed coat., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q541W5;Q9SS49", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0070062 extracellular exosome;GO:0000145 exocyst", "go_biological_process": "GO:0006887 exocytosis;GO:0006893 Golgi to plasma membrane transport;GO:0006904 vesicle docking involved in exocytosis;GO:0090522 vesicle tethering involved in exocytosis;GO:0048354 mucilage biosynthetic process involved in seed coat development", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "Q93YU5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W595-1", "uniprot_id": [ { "id": "SUVR4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W595", "type": "external" } ], "mass": 55855.0, "length": 492, "protein_name": "Histone-lysine N-methyltransferase SUVR4", "gene_name": "SUVR4", "organism": "Arabidopsis", "refseq_name": "SET-domain containing protein lysine methyltransferase family protein", "refseq_ac": [ { "id": "NP_187088", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187088", "type": "external" } ], "gene_names_uniprotkb": "SUVR4; SDG31; SET DOMAIN PROTEIN 31; SET31; T27C4.2; T27C4_2", "gene_names_refseq": "SDG31; SET DOMAIN PROTEIN 31; SUVR4; T27C4.2; T27C4_2", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase SUVR4; 2.1.1.-; 2.1.1.366; Protein SET DOMAIN GROUP 31; Su(var)3-9-related protein 4; Suppressor of variegation 3-9-related protein 4", "protein_names_refseq": "SET-domain containing protein lysine methyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G04380)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;11691919;21423664;24625295;27862469", "class_list": "", "function": "Histone methyltransferase that converts monomethylated 'Lys-9' of histone H3 (H3K9me1) to dimethylated 'Lys-9' (H3K9me2) in the absence of bound ubiquitin, and to trimethylated 'Lys-9' (H3K9me3) in the presence of bound ubiquitin. Acts in a locus-specific manner and contributes to the transcriptional silencing of pseudogenes and transposons. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EBC4;Q9M848", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" }, { "id": "2.1.1.367", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.367", "type": "external" }, { "id": "2.1.1.366", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.366", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0046974 histone H3K9 methyltransferase activity;GO:0140947 histone H3K9me2 methyltransferase activity;GO:0042054 histone methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005694 chromosome;GO:0009506 plasmodesma", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W595-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VV9-1", "uniprot_id": [ { "id": "TM16B_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VV9", "type": "external" } ], "mass": 12676.0, "length": 116, "protein_name": "Mitochondrial import inner membrane translocase subunit PAM16 like 2", "gene_name": "PAM16L2; TXR1", "organism": "Arabidopsis", "refseq_name": "Protein Transporter, Pam16", "refseq_ac": [ { "id": "NP_567078", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567078", "type": "external" } ], "gene_names_uniprotkb": "PAM16L2; TXR1; AtPAM16; F25L23.140; MUSE5; PAM16; THAXTOMIN A RESISTANT 1; TXR1; mutant; snc1-enhancing 5", "gene_names_refseq": "AtPAM16; MUSE5; PAM16; THAXTOMIN A RESISTANT 1; TXR1; mutant; snc1-enhancing 5", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit PAM16 like 2; AtPAM16L2; AtPAM16; Presequence translocated-associated motor subunit PAM16; Protein MUTANT SNC1-ENHANCING 5; Protein THAXTOMIN A RESISTANT 1", "protein_names_refseq": "Protein Transporter, Pam16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G59280)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;12897252;14593172;23638731;24153405;24194927;27862469", "class_list": "", "function": "Regulates ATP-dependent protein translocation into the mitochondrial matrix (By similarity). Involved in the uptake of thaxtomin, a phytotoxin produced by Streptomyces bacteria, that causes dramatic cell swelling, reduced seedling growth, and inhibition of cellulose synthesis (PubMed:12897252, PubMed:23638731). Modulates polar auxin transport (PubMed:23638731). Involved in importing a negative regulator of plant immunity into mitochondria, thus protecting plants from over-accumulation of reactive oxygen species (ROS) and preventing autoimmunity. Confers sensitivity to virulent pathogens such as the oomycete H.arabidopsidis Noco2 and the bacteria P.syringae pv. maculicola ES4326 (PubMed:24153405)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LX43", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005744 TIM23 mitochondrial import inner membrane translocase complex", "go_biological_process": "GO:0006952 defense response;GO:0055085 transmembrane transport;GO:2000378 negative regulation of reactive oxygen species metabolic process;GO:1900425 negative regulation of defense response to bacterium;GO:0002237 response to molecule of bacterial origin", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93VV9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Y37-1", "uniprot_id": [ { "id": "MNS3_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Y37", "type": "external" } ], "mass": 69069.0, "length": 624, "protein_name": "Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3", "gene_name": "MNS3", "organism": "Arabidopsis", "refseq_name": "alpha-mannosidase 3", "refseq_ac": [ { "id": "NP_564345", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564345", "type": "external" } ], "gene_names_uniprotkb": "MNS3; T1P2.10; T1P2_10; alpha-mannosidase 3", "gene_names_refseq": "MNS3; T1P2.10; T1P2_10; alpha-mannosidase 3", "protein_names_uniprotkb": "Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3; 3.2.1.113; 3.2.1.209", "protein_names_refseq": "alpha-mannosidase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G30000)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;20023195;27862469", "class_list": "", "function": "Class I alpha-mannosidase essential for early N-glycan processing. Removes preferentially alpha-1,2-linked mannose residues from Man(9)GlcNAc(2) to produce Man(8)GlcNAc(2). Involved in root development and cell wall biosynthesis., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 5, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q9C8R9", "ec_number_list": [ { "id": "3.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.-", "type": "external" }, { "id": "3.2.1.113", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.113", "type": "external" }, { "id": "3.2.1.209", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.209", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0004559 alpha-mannosidase activity;GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity", "go_cellular_component": "GO:0005768 endosome;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0016020 membrane;GO:0005797 Golgi medial cisterna", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0036503 ERAD pathway;GO:0006491 N-glycan processing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q93Y37-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944I4-1", "uniprot_id": [ { "id": "GLYK_ARATH", "url": "https://www.uniprot.org/uniprot/Q944I4", "type": "external" } ], "mass": 51018.0, "length": 456, "protein_name": "D-glycerate 3-kinase, chloroplastic", "gene_name": "GLYK", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001077855", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077855", "type": "external" } ], "gene_names_uniprotkb": "GLYK; F5I6.13; F5I6_13", "gene_names_refseq": "F5I6.13; F5I6_13", "protein_names_uniprotkb": "D-glycerate 3-kinase, chloroplastic; 2.7.1.31; AtGLYK", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80380)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15980259;24924143;27862469;29129375", "class_list": "", "function": "Catalyzes the concluding reaction of the photorespiratory C2 cycle, an indispensable ancillary metabolic pathway to the photosynthetic C3 cycle that enables land plants to grow in an oxygen-containing atmosphere., [UniProtKB, PubMed]; Cytoplasmic D-glycerate 3-kinase that constitutes a photorespiratory bypass that alleviates fluctuating light-induced photoinhibition (PubMed:29129375)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQE0;Q8LFL2;Q9C5L9;Q9C967", "ec_number_list": [ { "id": "2.7.1.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.31", "type": "external" } ], "go_molecular_function": "GO:0008887 glycerate kinase activity;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009853 photorespiration;GO:0009854 oxidative photosynthetic carbon pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q944I4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SXZ2-1", "uniprot_id": [ { "id": "FT_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SXZ2", "type": "external" } ], "mass": 19809.0, "length": 175, "protein_name": "Protein FLOWERING LOCUS T", "gene_name": "FT", "organism": "Arabidopsis", "refseq_name": "PEBP (phosphatidylethanolamine-binding protein) family protein", "refseq_ac": [ { "id": "NP_176726", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176726", "type": "external" } ], "gene_names_uniprotkb": "FT; F5I14.3; F5I14_3; FLOWERING LOCUS T; REDUCED STEM BRANCHING 8; RSB8", "gene_names_refseq": "F5I14.3; F5I14_3; FLOWERING LOCUS T; FT; REDUCED STEM BRANCHING 8; RSB8", "protein_names_uniprotkb": "Protein FLOWERING LOCUS T", "protein_names_refseq": "PEBP (phosphatidylethanolamine-binding protein) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65480)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10583960;10583961;11130712;14593172;15618421;15894619;16099949;16099979;16099980;16155177;16424903;22529749;22904146;25132385;26239308;27255839;27862469;29259105", "class_list": "", "function": "Component of the mobile flower-promoting signal (floral stimulus or florigen). Promotes the transition from vegetative growth to flowering. Required for 'SEPALLATA3' (SEP3) and 'FRUITFULL' (FUL) accumulation in mature rosette leaves. Seems to acts in parallel with 'LEAFY' to induce flowering by regulating 'APETALA1'. Translated in leaves and then transported to the shoot apical meristem where it activates the transcription of several floral meristem identity genes. May play a role in both the autonomous and the long-day flowering pathways., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O04467", "ec_number_list": [], "go_molecular_function": "GO:0008429 phosphatidylethanolamine binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0030154 cell differentiation;GO:0009908 flower development;GO:0009909 regulation of flower development;GO:0009911 positive regulation of flower development;GO:0010022 meristem determinacy", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q9SXZ2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YP0-1", "uniprot_id": [ { "id": "UEV1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YP0", "type": "external" } ], "mass": 17851.0, "length": 158, "protein_name": "Ubiquitin-conjugating enzyme E2 variant 1A", "gene_name": "MMZ1; UEV1A", "organism": "Arabidopsis", "refseq_name": "MMS ZWEI homologue 1", "refseq_ac": [ { "id": "NP_564191", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564191", "type": "external" } ], "gene_names_uniprotkb": "MMZ1; UEV1A; F26F24.10; F26F24_10; MMS ZWEI homologue 1; MMZ1; UBIQUITIN E2 VARIANT 1A; UEV1A", "gene_names_refseq": "F26F24.10; F26F24_10; MMS ZWEI homologue 1; MMZ1; UBIQUITIN E2 VARIANT 1A; UEV1A", "protein_names_uniprotkb": "Ubiquitin-conjugating enzyme E2 variant 1A; Protein MMS ZWEI HOMOLOG 1; Ubc enzyme variant 1A", "protein_names_refseq": "MMS ZWEI homologue 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G23260)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;17586653;18178771;27862469", "class_list": "", "function": "Has no ubiquitin ligase activity on its own. The heterodimer with UBC catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. May play a role in the control of progress through the cell cycle and differentiation. Probably not involved in the error-free DNA repair., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LR36", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031371 ubiquitin conjugating enzyme complex;GO:0005634 nucleus;GO:0031372 UBC13-MMS2 complex", "go_biological_process": "GO:0070534 protein K63-linked ubiquitination;GO:0006301 DNA damage tolerance;GO:1902916 positive regulation of protein polyubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q93YP0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AJ5-1", "uniprot_id": [ { "id": "PGLR5_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AJ5", "type": "external" } ], "mass": 48172.0, "length": 444, "protein_name": "Probable polygalacturonase At1g80170", "gene_name": "F18B13.25; F18B13_25", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F18B13.25; F18B13_25", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable polygalacturonase At1g80170; 3.2.1.15; PG; Pectinase At1g80170", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80170)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;17010199;17928369;22060019;23111157;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SSC2", "ec_number_list": [], "go_molecular_function": "GO:0004650 polygalacturonase activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0071555 cell wall organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q94AJ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944H0-1", "uniprot_id": [ { "id": "PEAM2_ARATH", "url": "https://www.uniprot.org/uniprot/Q944H0", "type": "external" } ], "mass": 56045.0, "length": 491, "protein_name": "Phosphoethanolamine N-methyltransferase 2", "gene_name": "NMT2", "organism": "Arabidopsis", "refseq_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "refseq_ac": [ { "id": "NP_175293", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175293", "type": "external" } ], "gene_names_uniprotkb": "NMT2; PMEAMT; T1N15.20; T1N15.23; T1N15_20", "gene_names_refseq": "AtPMEAMT; PMEAMT; T1N15.23; T1N15_23; phosphoethanolamine N-methyltransferase", "protein_names_uniprotkb": "Phosphoethanolamine N-methyltransferase 2; 2.1.1.103; AtPMEAMT; Phosphomethylethanolamine N-methyltransferase", "protein_names_refseq": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G48580); (ath:AT1G48600)", "pathway_count": 2, "publication_count": 9, "publication_id_list": "11130712;14593172;20650897;23328941;27862469;29084845;30381317;30518673;35560207", "class_list": "", "function": "Catalyzes N-methylation of phosphomonomethylethanolamine and phosphodimethylethanolamine, the two methylation steps required to convert phosphomonoethanolamine to phosphocholine (PubMed:20650897). Unlike NMT1, NMT2 cannot utilize phosphoethanolamine as substrate in vitro (PubMed:20650897). In association with NMT1, involved in the production of phosphatidylcholine in roots, essential for root development (PubMed:30518673). In association with NMT1 produce phosphocholine mainly for leaf growth maintenance (PubMed:35560207)., [UniProtKB, PubMed, PubMed, PubMed]; Catalyzes the N-methylation of phosphoethanolamine to phosphomonomethylethanolamine in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HYI6;Q9LP63;Q9LP64", "ec_number_list": [ { "id": "2.1.1.103", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.103", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008170 N-methyltransferase activity;GO:0000234 phosphoethanolamine N-methyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006656 phosphatidylcholine biosynthetic process;GO:0032259 methylation;GO:0000725 recombinational repair", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q944H0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q946Y7-1", "uniprot_id": [ { "id": "SYP61_ARATH", "url": "https://www.uniprot.org/uniprot/Q946Y7", "type": "external" } ], "mass": 27722.0, "length": 245, "protein_name": "Syntaxin-61", "gene_name": "SYP61", "organism": "Arabidopsis", "refseq_name": "syntaxin of plants 61", "refseq_ac": [ { "id": "NP_564310", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564310", "type": "external" } ], "gene_names_uniprotkb": "SYP61; ATSYP61; F3M18.7; F3M18_7; OSM1; syntaxin of plants 61", "gene_names_refseq": "ATSYP61; F3M18.7; F3M18_7; OSM1; SYP61; syntaxin of plants 61", "protein_names_uniprotkb": "Syntaxin-61; AtSYP61; Osmotic stress-sensitive mutant 1; Protein SYNTAXIN OF PLANTS 61", "protein_names_refseq": "syntaxin of plants 61", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28490)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11739776;12468724;14593172;15342965;15919093;21521696;21826108;22631563;23832588;25082856;25535279;27862469", "class_list": "", "function": "Vesicle trafficking protein that functions in the secretory pathway; the fusion of phospholipid vesicles containing SYP61 and VTI12 is triggered by YKT61 and YKT62 (PubMed:15919093, PubMed:21826108). Together with VTI12, required for membrane fusion (PubMed:15919093). Involved in osmotic stress tolerance and in abscisic acid (ABA) regulation of stomatal responses (PubMed:12468724). Plays a role in the exocytic trafficking of cellulose synthases (CESAs) and the transport of cell wall components to the plasma membrane (PubMed:21826108, PubMed:25535279). Together with SYP121, regulates the post-Golgi trafficking of the aquaporin PIP2-7 to the plasma membrane, thus modulating cell membrane water permeability (PubMed:25082856)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VYF3;Q9SGP7", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0032588 trans-Golgi network membrane;GO:0012505 endomembrane system;GO:0005802 trans-Golgi network;GO:0031201 SNARE complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006887 exocytosis;GO:0048193 Golgi vesicle transport;GO:0006906 vesicle fusion;GO:0048278 vesicle docking", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q946Y7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LR78-1", "uniprot_id": [ { "id": "BSU1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LR78", "type": "external" } ], "mass": 87789.0, "length": 793, "protein_name": "Serine/threonine-protein phosphatase BSU1", "gene_name": "BSU1", "organism": "Arabidopsis", "refseq_name": "Serine/threonine protein phosphatase family protein", "refseq_ac": [ { "id": "NP_171844", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171844", "type": "external" } ], "gene_names_uniprotkb": "BSU1; BRI1 SUPPRESSOR 1; F21B7.7", "gene_names_refseq": "BRI1 SUPPRESSOR 1; BSU1; F21B7.7", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase BSU1; 3.1.3.16; Bri1 suppressor protein 1", "protein_names_refseq": "Serine/threonine protein phosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03445)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14977918;17368080;18463617;20466843;21855796;27862469;30833711;35697730", "class_list": "", "function": "Phosphatase that acts as a positive regulator of brassinosteroid (BR) signaling (PubMed:14977918, PubMed:21855796). Dephosphorylates BES1, a transcription factor that regulates the expression of BR-response genes, thereby playing an important role in the regulation of response to BRs (PubMed:14977918). Inactivates the negative regulator of BR signaling ASK7/BIN2 by dephosphorylation at 'Tyr-200' (PubMed:21855796)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0032880 regulation of protein localization;GO:0009742 brassinosteroid mediated signaling pathway;GO:1900459 positive regulation of brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9LR78-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Z75-1", "uniprot_id": [ { "id": "UPS5_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Z75", "type": "external" } ], "mass": 44621.0, "length": 413, "protein_name": "Ureide permease 5", "gene_name": "UPS5", "organism": "Arabidopsis", "refseq_name": "ureide permease 5", "refseq_ac": [ { "id": "NP_001321599", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321599", "type": "external" } ], "gene_names_uniprotkb": "UPS5; ATUPS5; T1K7.19; T1K7_19; ureide permease 5", "gene_names_refseq": "ATUPS5; T1K7.19; T1K7_19; UPS5; ureide permease 5", "protein_names_uniprotkb": "Ureide permease 5; AtUPS5", "protein_names_refseq": "ureide permease 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G26440)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11971139;14593172;16738859;27862469", "class_list": "", "function": "Proton-coupled transporter that transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Mediates transport of uracil and 5-fluorouracil (a toxic uracil analog)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBT6;Q9FZC9", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0140318 protein transporter activity;GO:0042907 xanthine transmembrane transporter activity;GO:0005274 allantoin:proton symporter activity;GO:0015210 uracil transmembrane transporter activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009651 response to salt stress;GO:0071705 nitrogen compound transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q93Z75-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C9N3-1", "uniprot_id": [ { "id": "C3H14_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C9N3", "type": "external" } ], "mass": 35109.0, "length": 310, "protein_name": "Zinc finger CCCH domain-containing protein 14", "gene_name": "ATC3H14; C3H14", "organism": "Arabidopsis", "refseq_name": "Zinc finger C-x8-C-x5-C-x3-H type family protein", "refseq_ac": [ { "id": "NP_001321733", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321733", "type": "external" } ], "gene_names_uniprotkb": "ATC3H14; C3H14; AtC3H14; F4N21.6; F4N21_6", "gene_names_refseq": "AtC3H14; F4N21.6; F4N21_6", "protein_names_uniprotkb": "Zinc finger CCCH domain-containing protein 14; AtC3H14", "protein_names_refseq": "Zinc finger C-x8-C-x5-C-x3-H type family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G66810)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;18221561;25228083;25732536;27862469", "class_list": "", "function": "Functions probably as a transcriptional factor that activates genes involved in secondary cell wall biosynthesis (PubMed:25228083, PubMed:25732536). May play a role in both transcriptional and post-transcriptional regulation (PubMed:25228083). Binds to ssDNA, dsDNA, and ribohomopolymers in vitro (PubMed:25228083). Maybe involved in post-transcriptional regulation of its target genes (PubMed:25228083). Targets RNA of a polygalacturonase, a well-known cell wall modifying gene (PubMed:25228083). Functions redundantly with C3H15 to regulate secondary cell wall formation (PubMed:25732536). C3H14 and C3H15 have overlapping roles in the regulation of secondary cell wall formation and anther development (PubMed:25732536). C3H14 may contribute more to secondary cell wall thickening while C3H15 could be more important in anther development (PubMed:25732536). May regulate at both the transcriptional and post-transcriptional levels the expression of many genes involved in various biological processes, particularly those associated with cell wall metabolism and pollen development (PubMed:25732536)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0051511 negative regulation of unidimensional cell growth;GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:1901347 negative regulation of secondary cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9C9N3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FQ09-1", "uniprot_id": [ { "id": "KU80_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FQ09", "type": "external" } ], "mass": 76688.0, "length": 680, "protein_name": "ATP-dependent DNA helicase 2 subunit KU80", "gene_name": "KU80", "organism": "Arabidopsis", "refseq_name": "Ku80 family protein", "refseq_ac": [ { "id": "NP_564520", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564520", "type": "external" } ], "gene_names_uniprotkb": "KU80; ATKU80; F21D18.26; KU80-LIKE PROTEIN; T2J15.4", "gene_names_refseq": "ARABIDOPSIS THALIANA KU80 HOMOLOG; ATKU80; KU80-LIKE PROTEIN; KU80; T2J15.4", "protein_names_uniprotkb": "ATP-dependent DNA helicase 2 subunit KU80; 3.6.4.12; ATP-dependent DNA helicase 2 subunit 2; ATP-dependent DNA helicase II 80 kDa subunit", "protein_names_refseq": "Ku80 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G48050)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;12032094;12148535;12182708;12615949;12753583;16380432;16396834;18515112;22440515;23572148;25561503;27862469", "class_list": "", "function": "Involved in non-homologous end joining (NHEJ) DNA double strand break repair., [UniProtKB, UniProtKB, UniProtKB]; Single-stranded DNA-dependent ATP-dependent helicase. Involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair. When associated with KU70, binds to double-stranded telomeric and non-telomeric DNA sequences, but not to single-stranded DNA. Plays a role in maintaining telomere length. Acts as a negative regulator of telomerase. Binds to and recombines double-stranded T-DNA molecules., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C7Z3;Q9LNF5", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0003684 damaged DNA binding;GO:0016887 ATP hydrolysis activity;GO:0042162 telomeric DNA binding;GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0043564 Ku70:Ku80 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0000723 telomere maintenance;GO:0006302 double-strand break repair;GO:0006303 double-strand break repair via nonhomologous end joining", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9FQ09-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LMM5-1", "uniprot_id": [ { "id": "MPK11_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LMM5", "type": "external" } ], "mass": 42475.0, "length": 369, "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MPK11", "organism": "Arabidopsis", "refseq_name": "MAP kinase 11", "refseq_ac": [ { "id": "NP_001117210", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117210", "type": "external" } ], "gene_names_uniprotkb": "MPK11; ATMPK11; F22L4.10; F22L4_10; MAP kinase 11", "gene_names_refseq": "ATMPK11; F22L4.10; F22L4_10; MAP kinase 11; MPK11", "protein_names_uniprotkb": "Mitogen-activated protein kinase 11; 2.7.11.24; AtMPK11; MAP kinase 11", "protein_names_refseq": "MAP kinase 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01560)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;14993207;16537113;19513235;21575092;22074104;23572148;25561503;26187819;27862469;29167316;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H762", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004707 MAP kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0035556 intracellular signal transduction;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q9LMM5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9MAN1-1", "uniprot_id": [ { "id": "NGA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9MAN1", "type": "external" } ], "mass": 40288.0, "length": 358, "protein_name": "B3 domain-containing transcription factor NGA3", "gene_name": "NGA3", "organism": "Arabidopsis", "refseq_name": "AP2/B3-like transcriptional factor family protein", "refseq_ac": [ { "id": "NP_171611", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171611", "type": "external" } ], "gene_names_uniprotkb": "NGA3; NGATHA3; T25K16.3; T25K16_3", "gene_names_refseq": "NGA3; NGATHA3; T25K16.3; T25K16_3", "protein_names_uniprotkb": "B3 domain-containing transcription factor NGA3; Protein NGATHA3", "protein_names_refseq": "AP2/B3-like transcriptional factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01030)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14993207;16603651;18986826;27862469;28154133", "class_list": "", "function": "Regulates lateral organ growth. Functionally redundant with NGA1, NGA2 and NGA4., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 2, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 2, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 2, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009908 flower development;GO:0048366 leaf development;GO:1901371 regulation of leaf morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9MAN1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941F1-1", "uniprot_id": [ { "id": "PLA15_ARATH", "url": "https://www.uniprot.org/uniprot/Q941F1", "type": "external" } ], "mass": 58445.0, "length": 515, "protein_name": "Phospholipase A1-Igamma1, chloroplastic", "gene_name": "CRTISO; DALL4; PLA-I{GAMMA}1", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_563772", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563772", "type": "external" } ], "gene_names_uniprotkb": "CRTISO; DALL4; PLA-I{GAMMA}1; CAROTENOID ISOMERASE; CCR2; DAD1-Like Lipase 4; DALL4; F4H5.10; F4H5.11; F4H5_10; F4H5_11; PLA-I{gamma}1; carotenoid isomerase; phospholipase A I gamma 1", "gene_names_refseq": "DAD1-Like Lipase 4; DALL4; F4H5.11; F4H5_11; PLA-I{gamma}1; phospholipase A I gamma 1", "protein_names_uniprotkb": "Phospholipase A1-Igamma1, chloroplastic; 3.1.1.-; DAD1-like lipase 4", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06800)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;15130548;18267087;19527719;20348210;22223895;24430866;27862469", "class_list": "", "function": "Acylhydrolase with a broad specificity. Catalyzes the hydrolysis of phosphatidylcholine at the sn-1 position. Moderate activity toward phosphatidylcholine (PC), monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and triacylglycerol (TAG). May display dual sn-1/sn-2 substrate specificity. Could be involved in early wound response., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M9Y7", "ec_number_list": [ { "id": "3.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.-", "type": "external" }, { "id": "5.2.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.13", "type": "external" }, { "id": "3.1.1.32", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.32", "type": "external" }, { "id": "3.1.1.26", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.26", "type": "external" } ], "go_molecular_function": "GO:0004620 phospholipase activity;GO:0008970 phospholipase A1 activity;GO:0004806 triacylglycerol lipase activity;GO:0047714 galactolipase activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0016117 carotenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q941F1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LM84-1", "uniprot_id": [ { "id": "WOX14_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LM84", "type": "external" } ], "mass": 23976.0, "length": 211, "protein_name": "WUSCHEL-related homeobox 14", "gene_name": "WOX14", "organism": "Arabidopsis", "refseq_name": "WUSCHEL related homeobox 14", "refseq_ac": [ { "id": "NP_173493", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173493", "type": "external" } ], "gene_names_uniprotkb": "WOX14; ATWOX14; F2D10.19; F2D10_19; PALE2; WUSCHEL RELATED HOMEOBOX 14; WUSCHEL related homeobox 14", "gene_names_refseq": "ATWOX14; F2D10.19; F2D10_19; WOX14; WUSCHEL RELATED HOMEOBOX 14; WUSCHEL related homeobox 14", "protein_names_uniprotkb": "WUSCHEL-related homeobox 14; AtPALE2; Homeodomain protein PALE-2", "protein_names_refseq": "WUSCHEL related homeobox 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20700)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14711878;18950478;23578929;27862469;28218997", "class_list": "", "function": "Acts redundantly with WOX4 downstream of the TDR/PXY receptor kinase to regulate procambial cell proliferation and differentiation in vascular tissue, independently of any role in vascular (PubMed:23578929). Involved in the regulation of gibberellin (GA) biosynthesis pathway (PubMed:28218997). Positively regulates the expression of the GA biosynthesis gene GA3OX1, and negatively regulates the expression of GA2OX1 during secondary growth, which increases bioactive GA content in the inflorescence stem (PubMed:28218997). Promotes vascular cell differentiation in the inflorescence stem (PubMed:28218997)., [UniProtKB, PubMed, PubMed]; Transcription factor which may be involved in developmental processes., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051301 cell division;GO:0006355 regulation of DNA-templated transcription;GO:0010087 phloem or xylem histogenesis;GO:0010072 primary shoot apical meristem specification", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9LM84-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M7Q4-1", "uniprot_id": [ { "id": "AI5L5_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M7Q4", "type": "external" } ], "mass": 44165.0, "length": 416, "protein_name": "ABSCISIC ACID-INSENSITIVE 5-like protein 5", "gene_name": "ABF2", "organism": "Arabidopsis", "refseq_name": "abscisic acid responsive elements-binding factor 2", "refseq_ac": [ { "id": "NP_849777", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849777", "type": "external" } ], "gene_names_uniprotkb": "ABF2; AREB1; ATAREB1; AtABF2; BZIP36; T2P3", "gene_names_refseq": "ABF2; ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2; AREB1; ATAREB1; AtABF2; abscisic acid responsive elements-binding factor 2", "protein_names_uniprotkb": "ABSCISIC ACID-INSENSITIVE 5-like protein 5; ABA-responsive element-binding protein 1; ABRE-binding factor 2; Abscisic acid responsive elements-binding factor 2; AtbZIP36; bZIP transcription factor 36", "protein_names_refseq": "abscisic acid responsive elements-binding factor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G45249)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10636868;11005831;11130712;11906833;15361142;15516505;16284313;16446457;16463099;17307925;20374526;20466843;23572148;26091701;27862469", "class_list": "", "function": "Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as a transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0010255 glucose mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9M7Q4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4D6-1", "uniprot_id": [ { "id": "HC173_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4D6", "type": "external" } ], "mass": 65709.0, "length": 598, "protein_name": "Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic", "gene_name": "HCF173", "organism": "Arabidopsis", "refseq_name": "high chlorophyll fluorescence phenotype 173", "refseq_ac": [ { "id": "NP_173116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173116", "type": "external" } ], "gene_names_uniprotkb": "HCF173; F19K19.14", "gene_names_refseq": "F19K19.14; HCF173; high chlorophyll fluorescence phenotype 173", "protein_names_uniprotkb": "Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic", "protein_names_refseq": "high chlorophyll fluorescence phenotype 173", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16720)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;14593172;17435084;23027666;23111157;25561503;26909098;27862469;29438089;29891689;30844105", "class_list": "", "function": "Auxiliary factor required, together with HCF244, for the biogenesis of photosystem II (PSII), especially for the synthesis of the reaction center proteins (e.g. D1), via the regulation of the corresponding mRNA (e.g. psbA) translation initiation (ribosomal loading) and stabilization., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016854 racemase and epimerase activity;GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009523 photosystem II;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006413 translational initiation;GO:0010207 photosystem II assembly", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8W4D6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SLB8-1", "uniprot_id": [ { "id": "ZFP11_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SLB8", "type": "external" } ], "mass": 24353.0, "length": 214, "protein_name": "Zinc finger protein 11", "gene_name": "ZFP11", "organism": "Arabidopsis", "refseq_name": "zinc finger protein 11", "refseq_ac": [ { "id": "NP_001324610", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324610", "type": "external" } ], "gene_names_uniprotkb": "ZFP11; ATZFP11; MHK10.13; MHK10_13; ZINC FINGER PROTEIN 11; zinc finger protein 11", "gene_names_refseq": "ATZFP11; MHK10.13; MHK10_13; ZFP11; ZINC FINGER PROTEIN 11; zinc finger protein 11", "protein_names_uniprotkb": "Zinc finger protein 11; AtZFP11", "protein_names_refseq": "zinc finger protein 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42410)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617197;27862469", "class_list": "", "function": "Probable transcription factor that may regulate cell division and growth., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9SLB8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949Q0-1", "uniprot_id": [ { "id": "GPDA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q949Q0", "type": "external" } ], "mass": 45092.0, "length": 420, "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic", "gene_name": "GLY1", "organism": "Arabidopsis", "refseq_name": "NAD-dependent glycerol-3-phosphate dehydrogenase family protein", "refseq_ac": [ { "id": "NP_001324724", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324724", "type": "external" } ], "gene_names_uniprotkb": "GLY1; SFD1; T7D17.13; T7D17_13", "gene_names_refseq": "GLY1; SFD1; SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1; T7D17.13; T7D17_13", "protein_names_uniprotkb": "Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic; 1.1.1.8; Protein SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1", "protein_names_refseq": "NAD-dependent glycerol-3-phosphate dehydrogenase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40690)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;14729910;15044700;17431038;18088304;22645576;27862469", "class_list": "", "function": "Required to supply glycerol-3-phosphate in the chloroplast for the synthesis of glycerolipids. Required for activation of systemic acquired resistance (SAR). Provision of glycerol-3-phosphate may be involved in generating lipid signals necessary for mediating defense responses and SAR., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.1.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.8", "type": "external" } ], "go_molecular_function": "GO:0051287 NAD binding;GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity;GO:0141152 glycerol-3-phosphate dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009941 chloroplast envelope;GO:0009507 chloroplast", "go_biological_process": "GO:0006650 glycerophospholipid metabolic process;GO:0005975 carbohydrate metabolic process;GO:0008654 phospholipid biosynthetic process;GO:0006072 glycerol-3-phosphate metabolic process;GO:0046486 glycerolipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q949Q0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZPY4-1", "uniprot_id": [ { "id": "Q9ZPY4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZPY4", "type": "external" } ], "mass": 44408.0, "length": 397, "protein_name": "Transmembrane protein", "gene_name": "F13A10.8", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F13A10.8", "gene_names_refseq": "", "protein_names_uniprotkb": "Transmembrane protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46550)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617197;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9ZPY4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SHC8-1", "uniprot_id": [ { "id": "VAP12_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SHC8", "type": "external" } ], "mass": 26442.0, "length": 239, "protein_name": "Vesicle-associated protein 1-2", "gene_name": "PVA12", "organism": "Arabidopsis", "refseq_name": "plant VAP homolog 12", "refseq_ac": [ { "id": "NP_182039", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182039", "type": "external" } ], "gene_names_uniprotkb": "PVA12; T14P1.5; VAP12; plant VAP homolog 12", "gene_names_refseq": "PVA12; T14P1.5; plant VAP homolog 12", "protein_names_uniprotkb": "Vesicle-associated protein 1-2; AtPVA12; Plant VAP homolog 12; VAMP-associated protein 1-2", "protein_names_refseq": "plant VAP homolog 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45140)", "pathway_count": 1, "publication_count": 31, "publication_id_list": "10617197;14593172;15308754;17317660;17651370;18433157;18463617;19207211;19245862;19253305;19376835;20466843;21768351;22223895;22438062;23111157;23572148;23660473;23776212;24601666;25561503;26091701;26187819;27419465;27532006;27862469;28011693;28107777;29167316;29654922;30833711", "class_list": "", "function": "Vesicle-associated protein that binds the oxysterol-binding protein ORP3A and allows its targeting to the ER., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0090158 endoplasmic reticulum membrane organization;GO:0006605 protein targeting;GO:0061817 endoplasmic reticulum-plasma membrane tethering", "synthesized_glycan_count": 0, "hit_score": 3.2, "record_id": "Q9SHC8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941R4-1", "uniprot_id": [ { "id": "GONS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q941R4", "type": "external" } ], "mass": 36840.0, "length": 333, "protein_name": "GDP-mannose transporter GONST1", "gene_name": "GONST1", "organism": "Arabidopsis", "refseq_name": "golgi nucleotide sugar transporter 1", "refseq_ac": [ { "id": "NP_001189524", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189524", "type": "external" } ], "gene_names_uniprotkb": "GONST1; T10F5.19; T10F5_19", "gene_names_refseq": "GONST1; T10F5.19; T10F5_19; golgi nucleotide sugar transporter 1", "protein_names_uniprotkb": "GDP-mannose transporter GONST1; Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1", "protein_names_refseq": "golgi nucleotide sugar transporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G13650)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11595802;20576760;23695979;25053812;27381418;27862469", "class_list": "", "function": "Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen (PubMed:11595802, PubMed:20576760, PubMed:27381418). Required for the luminal synthesis of a variety of plant cell surface components (PubMed:11595802). Is required for the correct mannosylation of the glycosylinositol phosphoceramides (GIPC). Can indifferently transport GDP-mannose, GDP-Glucose, GDP-Fucose or GDP-Galactose in vitro (PubMed:23695979, PubMed:27381418)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EC15;Q9SIT2", "ec_number_list": [], "go_molecular_function": "GO:0015297 antiporter activity;GO:0005338 nucleotide-sugar transmembrane transporter activity;GO:0005457 GDP-fucose transmembrane transporter activity;GO:0005458 GDP-mannose transmembrane transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0015783 GDP-fucose transmembrane transport;GO:1990570 GDP-mannose transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q941R4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SKN5-1", "uniprot_id": [ { "id": "ARFJ_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SKN5", "type": "external" } ], "mass": 76721.0, "length": 693, "protein_name": "Auxin response factor 10", "gene_name": "ARF10", "organism": "Arabidopsis", "refseq_name": "auxin response factor 10", "refseq_ac": [ { "id": "NP_180402", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180402", "type": "external" } ], "gene_names_uniprotkb": "ARF10; T1B3.13; T1B3_13; auxin response factor 10", "gene_names_refseq": "ARF10; T1B3.13; T1B3_13; auxin response factor 10", "protein_names_uniprotkb": "Auxin response factor 10", "protein_names_refseq": "auxin response factor 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28350)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10476078;10617197;12036261;14593172;18305205;18986826;27862469", "class_list": "", "function": "Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Could act as transcriptional activator or repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B2CTC0;B2CTC4;B2CTD5;B2CTE0;Q0WQZ3;Q9SQ86", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0035198 miRNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051301 cell division;GO:0006355 regulation of DNA-templated transcription;GO:0048589 developmental growth;GO:0009743 response to carbohydrate", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9SKN5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZQ12-1", "uniprot_id": [ { "id": "GRF6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZQ12", "type": "external" } ], "mass": 28211.0, "length": 244, "protein_name": "Growth-regulating factor 6", "gene_name": "GRF6", "organism": "Arabidopsis", "refseq_name": "growth-regulating factor 6", "refseq_ac": [ { "id": "NP_027759", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_027759", "type": "external" } ], "gene_names_uniprotkb": "GRF6; AtGRF6; F5K7.4; F5K7_4; growth-regulating factor 6", "gene_names_refseq": "AtGRF6; F5K7.4; F5K7_4; GRF6; growth-regulating factor 6", "protein_names_uniprotkb": "Growth-regulating factor 6; AtGRF6; Transcription activator GRF6", "protein_names_refseq": "growth-regulating factor 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G06200)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;12974814;14593172;20023165;22060019;27862469", "class_list": "", "function": "Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues., [UniProtKB]; Transcription activator., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4R5", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0048366 leaf development;GO:0099402 plant organ development;GO:0032502 developmental process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9ZQ12-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SK33-1", "uniprot_id": [ { "id": "WRK60_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SK33", "type": "external" } ], "mass": 30578.0, "length": 271, "protein_name": "Probable WRKY transcription factor 60", "gene_name": "WRKY60", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 60", "refseq_ac": [ { "id": "NP_180072", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180072", "type": "external" } ], "gene_names_uniprotkb": "WRKY60; ATWRKY60; F27C12.8; F27C12_8; WRKY DNA-binding protein 60", "gene_names_refseq": "ATWRKY60; F27C12.8; F27C12_8; WRKY DNA-binding protein 60; WRKY60", "protein_names_uniprotkb": "Probable WRKY transcription factor 60; WRKY DNA-binding protein 60", "protein_names_refseq": "WRKY DNA-binding protein 60", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G25000)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;14593172;27862469", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VWV4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0002237 response to molecule of bacterial origin;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9SK33-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WF6-1", "uniprot_id": [ { "id": "SAG21_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WF6", "type": "external" } ], "mass": 10292.0, "length": 97, "protein_name": "Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial", "gene_name": "SAG21", "organism": "Arabidopsis", "refseq_name": "senescence-associated gene 21", "refseq_ac": [ { "id": "NP_001078346", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078346", "type": "external" } ], "gene_names_uniprotkb": "SAG21; AtLEA5; LEA38; LEA5; T14P8.2; T14P8_2; senescence-associated gene 21", "gene_names_refseq": "Arabidopsis thaliana late embryogenensis abundant like 5; AtLEA5; SAG21; T14P8.2; T14P8_2; senescence-associated gene 21", "protein_names_uniprotkb": "Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial; AtLEA5; Late embryogenesis abundant like 5; Late embryogenis abundant protein 38", "protein_names_refseq": "senescence-associated gene 21", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02380)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;14593172;16299172;17092320;18318901;18808718;19423640;21736589;25005920;27862469;9617813", "class_list": "", "function": "Mediates tolerance to oxidative stresses (e.g. hydrogen peroxide H(2)O(2), diamide, menadione and tert-butyl hydroperoxide) by minimizing the negative effects of oxidation and monitoring photosynthesis during stress (PubMed:17092320). Promotes root development. Prevents premature aging (e.g. senescence and flowering). Involved in resistance against compatible pathogens such as Botrytis cinerea and Pseudomonas syringae pv. tomato (PubMed:21736589)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MSE1;C0Z336;O81295", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006952 defense response;GO:0006979 response to oxidative stress;GO:0009409 response to cold;GO:0042542 response to hydrogen peroxide;GO:0009611 response to wounding", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q93WF6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZSM8-1", "uniprot_id": [ { "id": "EZA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZSM8", "type": "external" } ], "mass": 95396.0, "length": 856, "protein_name": "Histone-lysine N-methyltransferase EZA1", "gene_name": "EZA1; SWN", "organism": "Arabidopsis", "refseq_name": "SET domain-containing protein", "refseq_ac": [ { "id": "NP_567221", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567221", "type": "external" } ], "gene_names_uniprotkb": "EZA1; SWN; EZA1; SDG10; SET10; SWINGER; SWN; T10M13.3; T10M13_3", "gene_names_refseq": "EZA1; SDG10; SET DOMAIN-CONTAINING PROTEIN 10; SWINGER; SWN; T10M13.3; T10M13_3", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase EZA1; 2.1.1.356; CURLY LEAF-like 1; Protein SET DOMAIN GROUP 10; Protein SWINGER", "protein_names_refseq": "SET domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02020)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;12805620;14593172;18854416;23111157;23506837;25561503;27862469;28428341;30307069;33170267;35394700", "class_list": "", "function": "Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes, mainly abscisic acid (ABA) responsive elements (PubMed:30307069). PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development (By similarity). Forms a nuclear complex with CLF and HXK1 to target common glucose-responsive genes and regulate glucose signaling by glucose-mediated gene repression (PubMed:35394700). Affects the recruitment of HXK1 to the target chromatin (PubMed:35394700)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04246", "ec_number_list": [ { "id": "2.1.1.356", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.356", "type": "external" }, { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0003682 chromatin binding;GO:0003727 single-stranded RNA binding;GO:0046976 histone H3K27 methyltransferase activity;GO:0140951 histone H3K27 trimethyltransferase activity;GO:0042054 histone methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005677 chromatin silencing complex;GO:0031519 PcG protein complex;GO:0009506 plasmodesma", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045814 negative regulation of gene expression, epigenetic;GO:0032259 methylation;GO:0031507 heterochromatin formation;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q9ZSM8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZW1-1", "uniprot_id": [ { "id": "NIP11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZW1", "type": "external" } ], "mass": 31715.0, "length": 296, "protein_name": "Aquaporin NIP1-1", "gene_name": "NIP1-1; NLM1", "organism": "Arabidopsis", "refseq_name": "NOD26-like major intrinsic protein 1", "refseq_ac": [ { "id": "NP_567572", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567572", "type": "external" } ], "gene_names_uniprotkb": "NIP1-1; NLM1; AT-NLM1; ATNLM1; F13C5.200; F13C5_200; NIP1:1; NLM1", "gene_names_refseq": "1; AT-NLM1; ATNLM1; F13C5.200; F13C5_200; NIP1; NLM1; NOD26-LIKE INTRINSIC PROTEIN 1; NOD26-LIKE MAJOR INTRINSIC PROTEIN 1; NOD26-like major intrinsic protein 1", "protein_names_uniprotkb": "Aquaporin NIP1-1; 1; AtNIP1; NOD26-like intrinsic protein 1-1; NodLikeMip1; Nodulin-26-like major intrinsic protein 1; Protein NLM1", "protein_names_refseq": "NOD26-like major intrinsic protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19030)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11007982;11806824;14593172;27862469;9276952", "class_list": "", "function": "Water channel probably required to promote glycerol permeability and water transport across cell membranes., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48595;O49416", "ec_number_list": [], "go_molecular_function": "GO:0015105 arsenite transmembrane transporter activity;GO:0015250 water channel activity;GO:0015267 channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0046685 response to arsenic-containing substance;GO:0080170 hydrogen peroxide transmembrane transport;GO:0031347 regulation of defense response;GO:0015700 arsenite transport", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VZW1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941I6-1", "uniprot_id": [ { "id": "PMS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q941I6", "type": "external" } ], "mass": 102684.0, "length": 923, "protein_name": "DNA mismatch repair protein PMS1", "gene_name": "PMS1", "organism": "Arabidopsis", "refseq_name": "DNA mismatch repair protein", "refseq_ac": [ { "id": "NP_567236", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567236", "type": "external" } ], "gene_names_uniprotkb": "PMS1; ATPMS1; AtPMS1; POSTMEIOTIC SEGREGATION 1; T14P8.6; T14P8_6", "gene_names_refseq": "ATPMS1; AtPMS1; PMS1; POSTMEIOTIC SEGREGATION 1; T14P8.6; T14P8_6", "protein_names_uniprotkb": "DNA mismatch repair protein PMS1; Postmeiotic segregation protein 1; Protein POSTMEIOTIC SEGREGATION 1", "protein_names_refseq": "DNA mismatch repair protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02460)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;11910074;15604748;19115045;20571910;23111157;23184005;24924143;25561503;27862469;30833711", "class_list": "", "function": "Required for DNA mismatch repair (MMR), correcting base-base mismatches and insertion-deletion loops (IDLs) resulting from DNA replication, DNA damage or from recombination events between non-identical sequences during meiosis. Component of the MutLalpha heterodimer that forms a ternary complex with the MutS heterodimers, which initially recognize the DNA mismatches. This complex is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis. Plays a major role in maintaining the genetic stability of simple sequence repeats and in the repair of heteroduplex sites present in meiotic recombination intermediates. Does not seem to be required for homologous somatic recombination., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81287;Q8GY98", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0030983 mismatched DNA binding;GO:0140664 ATP-dependent DNA damage sensor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0032389 MutLalpha complex;GO:0032300 mismatch repair complex", "go_biological_process": "GO:0006310 DNA recombination;GO:0006298 mismatch repair;GO:0009555 pollen development;GO:0010154 fruit development;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q941I6-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W033-1", "uniprot_id": [ { "id": "AL3I1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W033", "type": "external" } ], "mass": 60173.0, "length": 550, "protein_name": "Aldehyde dehydrogenase family 3 member I1, chloroplastic", "gene_name": "ALDH3I1", "organism": "Arabidopsis", "refseq_name": "aldehyde dehydrogenase 3I1", "refseq_ac": [ { "id": "NP_567962", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567962", "type": "external" } ], "gene_names_uniprotkb": "ALDH3I1; ALDH3; F10M10.10; F10M10_10; aldehyde dehydrogenase 3I1; aldehyde dehydrogenase 3", "gene_names_refseq": "ALDH3I1; ALDH3; F10M10.10; F10M10_10; aldehyde dehydrogenase 3I1; aldehyde dehydrogenase 3", "protein_names_uniprotkb": "Aldehyde dehydrogenase family 3 member I1, chloroplastic; 1.2.1.3; AtALDH3; Ath-ALDH3", "protein_names_refseq": "aldehyde dehydrogenase 3I1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34240)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;11849595;12904208;14593172;15358267;15830124;18463617;20466843;21166653;24463048;25561503;27862469", "class_list": "", "function": "Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation. Medium- to long-chain saturated aldehydes are preferred substrates, while the short-chain aldehyde propanal is a weak substrate. Can use both NAD(+) and NADP(+), but the coenzyme preference is substrate dependent., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q940H4;Q9SYY9", "ec_number_list": [ { "id": "1.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0004028 3-chloroallyl aldehyde dehydrogenase activity;GO:0004029 aldehyde dehydrogenase (NAD+) activity;GO:0033721 aldehyde dehydrogenase (NADP+) activity;GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006081 aldehyde metabolic process;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8W033-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4P8-1", "uniprot_id": [ { "id": "MEB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4P8", "type": "external" } ], "mass": 68170.0, "length": 611, "protein_name": "Membrane protein of ER body 1", "gene_name": "MEB1", "organism": "Arabidopsis", "refseq_name": "vacuolar iron transporter (VIT) family protein", "refseq_ac": [ { "id": "NP_001190855", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190855", "type": "external" } ], "gene_names_uniprotkb": "MEB1; MEMBRANE OF ER BODY 1; T27E11.100; T27E11_100", "gene_names_refseq": "MEB1; MEMBRANE OF ER BODY 1; T27E11.100; T27E11_100", "protein_names_uniprotkb": "Membrane protein of ER body 1", "protein_names_refseq": "vacuolar iron transporter (VIT) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G27860)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;19423640;23166355;25561503;27862469;28011693", "class_list": "", "function": "May sequester excess cytosolic iron and manganese into endoplasmic reticulum to reduce metal ion toxicity. Not essential for the accumulation of ER body components, including PYK10., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "C0Z3G6;F4JJT0;Q9STP0", "ec_number_list": [], "go_molecular_function": "GO:0005384 manganese ion transmembrane transporter activity;GO:0005381 iron ion transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane;GO:0010168 ER body", "go_biological_process": "GO:0030026 intracellular manganese ion homeostasis;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W4P8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W3L1-1", "uniprot_id": [ { "id": "MFDR_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W3L1", "type": "external" } ], "mass": 53070.0, "length": 483, "protein_name": "NADPH:adrenodoxin oxidoreductase, mitochondrial", "gene_name": "MFDR", "organism": "Arabidopsis", "refseq_name": "Pyridine nucleotide-disulfide oxidoreductase family protein", "refseq_ac": [ { "id": "NP_194962", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194962", "type": "external" } ], "gene_names_uniprotkb": "MFDR; ADXR; F10M6.10; F8B4.60", "gene_names_refseq": "F8B4.60", "protein_names_uniprotkb": "NADPH:adrenodoxin oxidoreductase, mitochondrial; 1.18.1.6; Adrenodoxin reductase; AtMFDR; Mitochondrial ferredoxin reductase", "protein_names_refseq": "Pyridine nucleotide-disulfide oxidoreductase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32360)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;12714594;13677469;27862469", "class_list": "", "function": "Associates in vitro with the adrenodoxin-like protein MFDX1 to form an efficient low potential electron transfer chain that is able to reduce cytochrome C (PubMed:12714594, PubMed:13677469). Functions as accessory mitochondrial protein involved with BIO2 in the plant biotin synthase reaction (PubMed:12714594)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49356", "ec_number_list": [ { "id": "1.18.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:1.18.1.6", "type": "external" } ], "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0016491 oxidoreductase activity;GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0022900 electron transport chain;GO:0009102 biotin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8W3L1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SUC0-1", "uniprot_id": [ { "id": "3HIDH_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SUC0", "type": "external" } ], "mass": 37365.0, "length": 347, "protein_name": "Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial", "gene_name": "HDH1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "HDH1; T13K14.90; T13K14_90", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial; 1.1.1.31; HIBADH", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20930)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;23111157;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1ECP8;Q8LC25", "ec_number_list": [ { "id": "1.1.1.31", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.31", "type": "external" } ], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0051287 NAD binding;GO:0008442 3-hydroxyisobutyrate dehydrogenase activity;GO:0050661 NADP binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006574 L-valine catabolic process;GO:0006573 valine metabolic process;GO:0006551 L-leucine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9SUC0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940H2-1", "uniprot_id": [ { "id": "GNAT3_ARATH", "url": "https://www.uniprot.org/uniprot/Q940H2", "type": "external" } ], "mass": 26540.0, "length": 237, "protein_name": "GCN5-related N-acetyltransferase 3, chloroplastic", "gene_name": "GNAT3", "organism": "Arabidopsis", "refseq_name": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "refseq_ac": [ { "id": "NP_001329418", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329418", "type": "external" } ], "gene_names_uniprotkb": "GNAT3; F18F4", "gene_names_refseq": "", "protein_names_uniprotkb": "GCN5-related N-acetyltransferase 3, chloroplastic; 2.3.1.48", "protein_names_refseq": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19985)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;14593172;27862469;32633465", "class_list": "", "function": "Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA) and epsilon-lysine acetylation (KA), possibly with a low efficiency or toward specific plastid substrates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49425;Q8LCE0", "ec_number_list": [ { "id": "2.3.1.48", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.48", "type": "external" }, { "id": "2.3.1.87", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.87", "type": "external" }, { "id": "2.3.1.255", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.255", "type": "external" }, { "id": "2.3.1.259", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.259", "type": "external" } ], "go_molecular_function": "GO:0061733 protein-lysine-acetyltransferase activity;GO:0008080 N-acetyltransferase activity;GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0018394 peptidyl-lysine acetylation;GO:0006474 N-terminal protein amino acid acetylation;GO:0006048 UDP-N-acetylglucosamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q940H2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YT1-1", "uniprot_id": [ { "id": "GLR32_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YT1", "type": "external" } ], "mass": 101663.0, "length": 912, "protein_name": "Glutamate receptor 3.2", "gene_name": "GLR3.2; GLUR2", "organism": "Arabidopsis", "refseq_name": "glutamate receptor 2", "refseq_ac": [ { "id": "NP_001320141", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320141", "type": "external" } ], "gene_names_uniprotkb": "GLR3.2; GLUR2; ATGLR3.2; ATGLUR2; F23E12.150; F23E12_150; GLR3.2; GLUR2; GLUTAMATE RECEPTOR 3.2; glutamate receptor 2", "gene_names_refseq": "ATGLR3.2; ATGLUR2; F23E12.150; F23E12_150; GLR3.2; GLUR2; GLUTAMATE RECEPTOR 3.2; glutamate receptor 2", "protein_names_uniprotkb": "Glutamate receptor 3.2; AtGLR3.2; AtGluR2; Glutamate receptor-like protein 3.2; Ligand-gated ion channel 3.2", "protein_names_refseq": "glutamate receptor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35290)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11158446;11379626;12082126;14593172;23590882;27862469;33027636", "class_list": "", "function": "Glutamate-gated receptor that probably acts as a non-selective cation channel (Probable). May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells (Probable). Could play a role in calcium unloading from the xylem vessels (PubMed:11158446). Acts as a negative regulator of lateral root initiation and development (PubMed:23590882). May restrict primordia numbers and position along the root axis by a signaling process originating in the phloem (PubMed:23590882)., [UniProtKB, PubMed, PubMed]; Glutamate-gated receptor that probably acts as non-selective cation channel., [UniProtKB, UniProtKB]", "predicted_glycosites": 10, "predicted_n_glycosites": 10, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "O65498;Q9C561", "ec_number_list": [], "go_molecular_function": "GO:0005262 calcium channel activity;GO:0015276 ligand-gated monoatomic ion channel activity;GO:0038023 signaling receptor activity;GO:0008066 glutamate receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0019722 calcium-mediated signaling;GO:0006816 calcium ion transport;GO:0006874 intracellular calcium ion homeostasis;GO:0009611 response to wounding;GO:0006883 intracellular sodium ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q93YT1-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FFB6-1", "uniprot_id": [ { "id": "ZFP34_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FFB6", "type": "external" } ], "mass": 33549.0, "length": 291, "protein_name": "E3 ubiquitin-protein ligase RZFP34", "gene_name": "RZPF34", "organism": "Arabidopsis", "refseq_name": "CHY-type/CTCHY-type/RING-type Zinc finger protein", "refseq_ac": [ { "id": "NP_197683", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197683", "type": "external" } ], "gene_names_uniprotkb": "RZPF34; AtRZPF34; CHYR1; MRN17.15; MRN17_15; RING zinc-finger protein 34", "gene_names_refseq": "AtRZPF34; MRN17.15; MRN17_15; RING zinc-finger protein 34; RZPF34", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RZFP34; 2.3.2.27; AtRZPF34; CHY zinc-finger and RING protein 1; RING zinc-finger protein 34; RZFP34 protein homolog", "protein_names_refseq": "CHY-type/CTCHY-type/RING-type Zinc finger protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G22920)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;15644464;17217462;25002225;26508764;27862469;9330910", "class_list": "", "function": "Possesses E3 ubiquitin-protein ligase activity in vitro. Mediates mainly 'Lys-48'-linked polyubiquitination. Promotes abscisic acid (ABA)-induced stomatal closure, reactive oxygen species (ROS) production and drought tolerance (PubMed:26508764). Involved in the regulation of stomatal aperture (PubMed:25002225)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L9Y9", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:1902456 regulation of stomatal opening", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9FFB6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W5S1-1", "uniprot_id": [ { "id": "CCH11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W5S1", "type": "external" } ], "mass": 38131.0, "length": 336, "protein_name": "Cyclin-H1-1", "gene_name": "CYCH1-1; CYCH", "organism": "Arabidopsis", "refseq_name": "cyclin H;1", "refseq_ac": [ { "id": "NP_198114", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198114", "type": "external" } ], "gene_names_uniprotkb": "CYCH1-1; CYCH; CYCH1; CYCH:1; F15A18.80; F15A18_80; cyclin H:1", "gene_names_refseq": "1; CYCH; F15A18.80; F15A18_80; cyclin H", "protein_names_uniprotkb": "Cyclin-H1-1; 1; CycH1", "protein_names_refseq": "1; cyclin H", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G27620)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;11910074;15208425;15486101;16856985;22223895;27862469", "class_list": "", "function": "Associates with CDK-2 and CDK-3 and activates the CDK kinases., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0070985 transcription factor TFIIK complex", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0051301 cell division;GO:0006355 regulation of DNA-templated transcription;GO:0006367 transcription initiation at RNA polymerase II promoter;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W5S1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4B1-1", "uniprot_id": [ { "id": "RCF3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4B1", "type": "external" } ], "mass": 71345.0, "length": 652, "protein_name": "RNA-binding KH domain-containing protein RCF3", "gene_name": "RCF3", "organism": "Arabidopsis", "refseq_name": "RNA-binding KH domain-containing protein", "refseq_ac": [ { "id": "NP_200118", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200118", "type": "external" } ], "gene_names_uniprotkb": "RCF3; ESR1; HOS5; MNB8.12; MNB8_12; SHI1; SHINY 1", "gene_names_refseq": "MNB8.12; MNB8_12; RCF3; SHI1; SHINY 1; regulator of CBF gene expression 3", "protein_names_uniprotkb": "RNA-binding KH domain-containing protein RCF3; Protein ENHANCED STRESS RESPONSE 1; Protein HIGH OSMOTIC STRESS GENE EXPRESSION 5; Protein REGULATOR OF CBF GENE EXPRESSION 3; Protein SHINY 1", "protein_names_refseq": "RNA-binding KH domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G53060)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10504578;10718197;11130714;14593172;23087326;23172892;23874224;24146632;24303021;25561503;25985302;26227967;26512101;27862469;30833711", "class_list": "", "function": "Acts as a negative regulator of osmotic stress-induced gene expression (PubMed:10504578). Involved in the regulation of thermotolerance responses under heat stress. Functions as an upstream regulator of heat stress transcription factor (HSF) genes. Negatively regulates HSFA1A, HSFA1B and HSFA1D, but positively controls the expression of HSFA1E, HSFA3, HSFA9, HSFB3, and DREB2C (PubMed:23087326). Forms a complex with CPL1 that modulates co-transcriptional processes such as mRNA capping and polyadenylation, and functions to repress stress-inducible gene expression (PubMed:23874224). Regulates pre-mRNA processing under salt stress (PubMed:24146632). Involved in primary miRNA processing and pri-miRNA biogenesis (PubMed:26227967, PubMed:26512101). Binds both intronless and intron-containing pri-miRNAs (PubMed:26227967). Acts as a regulator of biotic stress response gene expression and basal JA-mediated responses involved in defense. Acts as a negative regulator of resistance to the fungal pathogen Fusarium oxysporum (PubMed:25985302)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LVU6", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0070878 primary miRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016607 nuclear speck;GO:0010445 nuclear dicing body", "go_biological_process": "GO:0006396 RNA processing;GO:0006397 mRNA processing;GO:0006970 response to osmotic stress;GO:0008380 RNA splicing;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8W4B1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WK5-1", "uniprot_id": [ { "id": "APRR7_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WK5", "type": "external" } ], "mass": 79663.0, "length": 727, "protein_name": "Two-component response regulator-like APRR7", "gene_name": "APRR7; PRR7", "organism": "Arabidopsis", "refseq_name": "pseudo-response regulator 7", "refseq_ac": [ { "id": "NP_568107", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568107", "type": "external" } ], "gene_names_uniprotkb": "APRR7; PRR7; APRR7; F9G14.120; F9G14_120; pseudo-response regulator 7", "gene_names_refseq": "APRR7; F9G14.120; F9G14_120; PRR7; pseudo-response regulator 7", "protein_names_uniprotkb": "Two-component response regulator-like APRR7; Pseudo-response regulator 7", "protein_names_refseq": "pseudo-response regulator 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02810)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10945350;11100772;11130714;14563930;14593172;18562312;20233950;21098730;21357491;22942380;23027938;23808423;23933882;24153186;25561503;27862469;29654922;30833711", "class_list": "", "function": "Transcriptional repressor of CCA1 and LHY, and positive regulator of LWD1 and LWD2 expression. Represses the expression of other clock proteins and master regulators of plant growth, development and response to abiotic stress. Involved in the positive and negative feedback loops of the circadian clock. Controls photoperiodic flowering response and temperature compensation. Expression of several members of the ARR-like family is controlled by circadian rhythm. APRR9, APRR7, and APRR5 coordinately act on the upstream region of the target genes to repress their expression from noon until midnight. The particular coordinated sequential expression of APRR9, APRR7, APRR5, APRR3 and APPR1 result to circadian waves that may be at the basis of the endogenous circadian clock., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ04", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0007623 circadian rhythm;GO:0000160 phosphorelay signal transduction system", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q93WK5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A15-1", "uniprot_id": [ { "id": "APTG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A15", "type": "external" } ], "mass": 62701.0, "length": 548, "protein_name": "Mannosyltransferase APTG1", "gene_name": "APTG1", "organism": "Arabidopsis", "refseq_name": "Alg9-like mannosyltransferase family", "refseq_ac": [ { "id": "NP_568305", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568305", "type": "external" } ], "gene_names_uniprotkb": "APTG1; GT22; T9L3.150; T9L3_150", "gene_names_refseq": "APTG1; T9L3.150; T9L3_150; abnormal pollen tube guidance 1", "protein_names_uniprotkb": "Mannosyltransferase APTG1; 2.4.1.-; Glycosyltransferase 22; Protein ABNORMAL POLLEN TUBE GUIDANCE 1", "protein_names_refseq": "Alg9-like mannosyltransferase family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G14850)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;24905498;24963069;27862469;27872247", "class_list": "glycogene;glycosyltransferase", "function": "Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (PubMed:24963069). Required for the pollen tube micropylar guidance and embryo development by regulating GPI-anchor mediated protein localization (e.g. COBL10 and A36) (PubMed:24963069, PubMed:27872247)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 3, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9LEQ5", "ec_number_list": [], "go_molecular_function": "GO:0000026 alpha-1,2-mannosyltransferase activity;GO:0000030 mannosyltransferase activity;GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process;GO:0016255 attachment of GPI anchor to protein;GO:0009793 embryo development ending in seed dormancy;GO:0010183 pollen tube guidance", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q94A15-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FE62-1", "uniprot_id": [ { "id": "YLS8_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FE62", "type": "external" } ], "mass": 16591.0, "length": 142, "protein_name": "Thioredoxin-like protein YLS8", "gene_name": "YLS8", "organism": "Arabidopsis", "refseq_name": "mRNA splicing factor, thioredoxin-like U5 snRNP", "refseq_ac": [ { "id": "NP_196446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196446", "type": "external" } ], "gene_names_uniprotkb": "YLS8; F8L15.20; YELLOW-LEAF-SPECIFIC GENE 8", "gene_names_refseq": "YELLOW-LEAF-SPECIFIC GENE 8; YLS8", "protein_names_uniprotkb": "Thioredoxin-like protein YLS8; Protein YELLOW-LEAF-SPECIFIC GENE 8", "protein_names_refseq": "mRNA splicing factor, thioredoxin-like U5 snRNP", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08290)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;11230571;14593172;22074104;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LF46", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005681 spliceosomal complex;GO:0005682 U5 snRNP;GO:0046540 U4/U6 x U5 tri-snRNP complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FE62-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940T5-1", "uniprot_id": [ { "id": "RDUF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q940T5", "type": "external" } ], "mass": 44381.0, "length": 407, "protein_name": "E3 ubiquitin-protein ligase RDUF2", "gene_name": "DURF2; RDUF2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "DURF2; RDUF2; AtRDUF2; F2O15.22; F2O15_22", "gene_names_refseq": "", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RDUF2; 2.3.2.27; AtRDUF2; RING and DUF1117 domain-containing protein 2; RING-type E3 ubiquitin transferase RDUF2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59550)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;22405823;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase involved in the positive regulation of abscisic acid-dependent drought stress responses. Possesses E3 ubiquitin ligase activity in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LTH6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0009414 response to water deprivation;GO:0051865 protein autoubiquitination;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q940T5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZY3-1", "uniprot_id": [ { "id": "STT3A_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZY3", "type": "external" } ], "mass": 86113.0, "length": 779, "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A", "gene_name": "STT3A", "organism": "Arabidopsis", "refseq_name": "staurosporin and temperature sensitive 3-like A", "refseq_ac": [ { "id": "NP_568380", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568380", "type": "external" } ], "gene_names_uniprotkb": "STT3A; T29J13.110; T29J13_110", "gene_names_refseq": "STT3A; T29J13.110; T29J13_110; staurosporin and temperature sensitive 3-like A", "protein_names_uniprotkb": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A; 2.4.99.18; Integral membrane protein 1; Oligosaccharyl transferase subunit STT3A; Protein STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A; STT3-A", "protein_names_refseq": "staurosporin and temperature sensitive 3-like A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19690)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;12972670;14593172;19763086;19763087;22923678;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Catalytic subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity. This subunit contains the active site and the acceptor peptide and donor lipid-linked oligosaccharide (LLO) binding pockets (By similarity). Controls adaptive responses to salt/osmotic stress. Acts as a key glycosylation determinant for EFR function during plant innate immunity (PubMed:12972670, PubMed:19763086, PubMed:19763087)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q94A42", "ec_number_list": [ { "id": "2.4.99.18", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.99.18", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0009651 response to salt stress;GO:0047484 regulation of response to osmotic stress", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93ZY3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A76-1", "uniprot_id": [ { "id": "GORK_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A76", "type": "external" } ], "mass": 94461.0, "length": 820, "protein_name": "Potassium channel GORK", "gene_name": "GORK", "organism": "Arabidopsis", "refseq_name": "gated outwardly-rectifying K+ channel", "refseq_ac": [ { "id": "NP_198566", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198566", "type": "external" } ], "gene_names_uniprotkb": "GORK; MPA22.4; MPA22_4", "gene_names_refseq": "GORK; MPA22.4; MPA22_4; gated outwardly-rectifying K+ channel", "protein_names_uniprotkb": "Potassium channel GORK; AtGORK; Guard cell outward rectifying K(+) channel", "protein_names_refseq": "gated outwardly-rectifying K+ channel", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G37500)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11113445;11130714;11500563;11728473;12671068;14593172;14596925;25561503;27862469", "class_list": "", "function": "Major selective outward-rectifying potassium channel of the guard cell membrane. Involved in regulation of stomatal movements according to the water status. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by depolarization. Conductance of the channel is modulated in a potassium-dependent fashion. May interact with the cytoskeleton or with regulatory proteins., [UniProtKB, PubMed]; Potassium channel., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FNY5", "ec_number_list": [], "go_molecular_function": "GO:0015271 outward rectifier potassium channel activity;GO:0015079 potassium ion transmembrane transporter activity;GO:0015075 monoatomic ion transmembrane transporter activity;GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0031965 nuclear membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0006811 monoatomic ion transport;GO:0009409 response to cold;GO:0051592 response to calcium ion;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q94A76-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FH95-1", "uniprot_id": [ { "id": "TOE3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FH95", "type": "external" } ], "mass": 39594.0, "length": 352, "protein_name": "AP2-like ethylene-responsive transcription factor TOE3", "gene_name": "TOE3", "organism": "Arabidopsis", "refseq_name": "target of early activation tagged (EAT) 3", "refseq_ac": [ { "id": "NP_201519", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201519", "type": "external" } ], "gene_names_uniprotkb": "TOE3; K21H1.14; K21H1.22; K21H1_22", "gene_names_refseq": "K21H1.22; K21H1_22; TOE3; target of early activation tagged (EAT) 3", "protein_names_uniprotkb": "AP2-like ethylene-responsive transcription factor TOE3; Protein TARGET OF EAT 3", "protein_names_refseq": "target of early activation tagged (EAT) 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G67180)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11130714;14555699;15988559;16407444;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). May regulate negatively the transition to flowering time and confers flowering time delay., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009873 ethylene-activated signaling pathway;GO:0048460 flower formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9FH95-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FIF5-1", "uniprot_id": [ { "id": "P2C78_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FIF5", "type": "external" } ], "mass": 45538.0, "length": 413, "protein_name": "Probable protein phosphatase 2C 78", "gene_name": "HAI1; SAG113", "organism": "Arabidopsis", "refseq_name": "PP2C protein (Clade A protein phosphatases type 2C)", "refseq_ac": [ { "id": "NP_200730", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200730", "type": "external" } ], "gene_names_uniprotkb": "HAI1; SAG113; HAI1; MNC17.110; MNC17.13; MNC17_13; SAG113; highly ABA-induced PP2C gene 1; senescence associated gene 113", "gene_names_refseq": "HAI1; MNC17.13; MNC17_13; SAG113; highly ABA-induced PP2C gene 1; senescence associated gene 113", "protein_names_uniprotkb": "Probable protein phosphatase 2C 78; 3.1.3.16; AtPP2C78; Protein HIGHLY ABA-INDUCED 1; Protein SENESCENCE-ASSOCIATED GENE 113", "protein_names_refseq": "PP2C protein (Clade A protein phosphatases type 2C)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59220)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10048488;11130714;14593172;19021904;22007837;22184656;22198272;22829320;27862469", "class_list": "", "function": "Acts as a negative regulator of abscisic acid (ABA) signaling for stomatal closure in leaves, and controls water loss during leaf senescence (PubMed:22007837, PubMed:22184656). Activated by the NAC029/NAP transcription factor during ABA signaling in senescing leaves (PubMed:22184656). Functions as a negative regulator of osmotic stress and ABA signaling (PubMed:22198272). Acts as a negative regulator of response to drought (PubMed:22829320)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q944I7", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0033106 cis-Golgi network membrane;GO:0009507 chloroplast", "go_biological_process": "GO:1902531 regulation of intracellular signal transduction;GO:0009414 response to water deprivation;GO:0009658 chloroplast organization;GO:0009737 response to abscisic acid;GO:0009788 negative regulation of abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9FIF5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W489-1", "uniprot_id": [ { "id": "RAD4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W489", "type": "external" } ], "mass": 96285.0, "length": 865, "protein_name": "DNA repair protein RAD4", "gene_name": "RAD4", "organism": "Arabidopsis", "refseq_name": "DNA repair protein Rad4 family", "refseq_ac": [ { "id": "NP_001031894", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031894", "type": "external" } ], "gene_names_uniprotkb": "RAD4; ATRAD4; MTG13.7; MTG13_7", "gene_names_refseq": "ATRAD4; MTG13.7; MTG13_7; RAD4", "protein_names_uniprotkb": "DNA repair protein RAD4", "protein_names_refseq": "DNA repair protein Rad4 family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16630)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;16786311;27862469;29283431;9501997", "class_list": "", "function": "Essential protein (PubMed:29283431). May have a role in the nucleotide excision repair (NER) pathway (Probable). Promotes UV tolerance via dark repair mechanism (nucleotide excision repair) (PubMed:29283431)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003684 damaged DNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0071942 XPC complex;GO:0000111 nucleotide-excision repair factor 2 complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006298 mismatch repair;GO:0009411 response to UV;GO:0000724 double-strand break repair via homologous recombination;GO:0006289 nucleotide-excision repair;GO:0009650 UV protection", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8W489-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LS24-1", "uniprot_id": [ { "id": "NAC96_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LS24", "type": "external" } ], "mass": 33580.0, "length": 292, "protein_name": "NAC domain-containing protein 96", "gene_name": "NAC096", "organism": "Arabidopsis", "refseq_name": "NAC domain containing protein 96", "refseq_ac": [ { "id": "NP_199471", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199471", "type": "external" } ], "gene_names_uniprotkb": "NAC096; F10E10.6; F10E10_6; anac096", "gene_names_refseq": "F10E10.6; F10E10_6; NAC domain containing protein 96; NAC096; anac096", "protein_names_uniprotkb": "NAC domain-containing protein 96; ANAC096", "protein_names_refseq": "NAC domain containing protein 96", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46590)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;15029955;24285786;25182467;27862469", "class_list": "", "function": "Transcriptional activator involved in the positive regulation of abscisic acid (ABA) responsive genes. Acts as a positive factor of ABA-mediated responses. Involved in the transcriptional activation of ABA-inducible genes in response to dehydration and osmotic stresses. Plays a positive role in both stomatal closure and water loss under dehydration stress conditions. Acts synergistically with ABF2 to activate the dehydration stress-response factor RD29A transcription. Binds to the consensus core cis-acting elements 5'-CGTA-3' and 5'-CACG-3' at the RD29A promoter (PubMed:24285786). Involved in hypocotyl graft union formation. Required for the auxin-mediated promotion of vascular tissue proliferation during hypocotyl graft attachment (PubMed:25182467)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009611 response to wounding;GO:0009789 positive regulation of abscisic acid-activated signaling pathway;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9LS24-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FIE3-1", "uniprot_id": [ { "id": "VIN3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FIE3", "type": "external" } ], "mass": 69347.0, "length": 620, "protein_name": "Protein VERNALIZATION INSENSITIVE 3", "gene_name": "VIN3", "organism": "Arabidopsis", "refseq_name": "Fibronectin type III domain-containing protein", "refseq_ac": [ { "id": "NP_001332646", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332646", "type": "external" } ], "gene_names_uniprotkb": "VIN3; MSF19.4; MSF19_4; VERNALIZATION INSENSITIVE 3", "gene_names_refseq": "MSF19.4; MSF19_4; VERNALIZATION INSENSITIVE 3; VIN3", "protein_names_uniprotkb": "Protein VERNALIZATION INSENSITIVE 3", "protein_names_refseq": "Fibronectin type III domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57380)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10048488;11130714;14712276;17114575;17174094;18854416;27862469", "class_list": "", "function": "Plays a central role in vernalization by mediating the initial transcriptional repression of the homeotic gene FLC, a floral repressor, after a cold treatment. However, due to its transient expression, it cannot maintain repression of FLC, which is then maintained by Polycomb Group complexes containing VRN2 throughout development. Required to deacetylate histones on the FLC promoter. Together with VIL1, required during vernalization for the modifications of FLC and FLM chromatin that are associated with an epigenetically silenced state (e.g. chromatin modifications, histone deacetylation, and trimethylated H3 'Lys-4' H3K4me3 and 'Lys-27' H3K27me3) and with acquisition of competence to flower., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q53YX0", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0005677 chromatin silencing complex", "go_biological_process": "GO:0070417 cellular response to cold;GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0001666 response to hypoxia;GO:0045814 negative regulation of gene expression, epigenetic", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9FIE3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VT9-1", "uniprot_id": [ { "id": "RL101_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VT9", "type": "external" } ], "mass": 24917.0, "length": 220, "protein_name": "Large ribosomal subunit protein uL16z", "gene_name": "RPL10A; SAC52", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein L16p/L10e family protein", "refseq_ac": [ { "id": "NP_563945", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563945", "type": "external" } ], "gene_names_uniprotkb": "RPL10A; SAC52; F14L17.9; F14L17_9; RPL10A; RPL10; SAC52; SUPPRESSOR OF ACAULIS 52; ribosomal protein L10 A; ribosomal protein L10", "gene_names_refseq": "F14L17.9; F14L17_9; RPL10A; RPL10; SAC52; SUPPRESSOR OF ACAULIS 52; ribosomal protein L10 A; ribosomal protein L10", "protein_names_uniprotkb": "Large ribosomal subunit protein uL16z; 60S ribosomal protein L10-1; Ribosomal protein RPL10A; Suppressor of ACAULIS 52", "protein_names_refseq": "Ribosomal protein L16p/L10e family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14320)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11598216;14593172;18694459;18789471;19112492;20516338;20855946;23886624;25707794;27862469;28011693;36423343", "class_list": "", "function": "Ribosomal protein involved in translational regulation (PubMed:18694459). Contribute to general translation under UV-B stress (PubMed:20516338, PubMed:23886624). Involved in the NIK1-mediated defense response to geminivirus infection (PubMed:18789471, PubMed:19112492). Acts coordinately with LIMYB as a transcriptional repressor (PubMed:25707794)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HUJ2;Q93VL0", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005840 ribosome", "go_biological_process": "GO:0071493 cellular response to UV-B;GO:0035556 intracellular signal transduction;GO:0032502 developmental process;GO:0006412 translation;GO:0140374 antiviral innate immune response", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q93VT9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SA23-1", "uniprot_id": [ { "id": "SYP51_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SA23", "type": "external" } ], "mass": 25889.0, "length": 232, "protein_name": "Syntaxin-51", "gene_name": "SYP51", "organism": "Arabidopsis", "refseq_name": "syntaxin of plants 51", "refseq_ac": [ { "id": "NP_001031054", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031054", "type": "external" } ], "gene_names_uniprotkb": "SYP51; ATSYP51; F3O9.4; F3O9_4; syntaxin of plants 51", "gene_names_refseq": "ATSYP51; F3O9.4; F3O9_4; SYP51; syntaxin of plants 51", "protein_names_uniprotkb": "Syntaxin-51; AtSYP51", "protein_names_refseq": "syntaxin of plants 51", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16240)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;11739776;14593172;27862469", "class_list": "", "function": "Vesicle trafficking protein that functions in the secretory pathway., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0012505 endomembrane system;GO:0010008 endosome membrane;GO:0005773 vacuole", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport;GO:0006906 vesicle fusion;GO:0048278 vesicle docking", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9SA23-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LDU6-1", "uniprot_id": [ { "id": "ST7R_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LDU6", "type": "external" } ], "mass": 49591.0, "length": 432, "protein_name": "7-dehydrocholesterol reductase", "gene_name": "DWF5", "organism": "Arabidopsis", "refseq_name": "Ergosterol biosynthesis ERG4/ERG24 family", "refseq_ac": [ { "id": "NP_175460", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175460", "type": "external" } ], "gene_names_uniprotkb": "DWF5; 7-STEROL DELTA7 REDUCTASE; 7RED; DELTA5; DWARF 5; F11F12.21; F11F12_21; LEPIDA; LE; PARVA; PA; ST7R; STEROL DELTA7 REDUCTASE", "gene_names_refseq": "7-STEROL DELTA7 REDUCTASE; 7RED; DELTA5; DWARF 5; DWF5; F11F12.21; F11F12_21; LEPIDA; LE; PARVA; PA; ST7R; STEROL DELTA7 REDUCTASE", "protein_names_uniprotkb": "7-dehydrocholesterol reductase; 1.3.1.21; 7-DHC reductase; Protein DWARF 5; Sterol Delta(7)-reductase", "protein_names_refseq": "Ergosterol biosynthesis ERG4/ERG24 family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50430)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10758495;11130712;14593172;25561503;27862469;8631902", "class_list": "", "function": "Production of cholesterol by reduction of C7-C8 double bond of 7-dehydrocholesterol (7-DHC). Lesions in the gene coding for the enzyme cause dwarfism., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38930", "ec_number_list": [ { "id": "1.3.1.21", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.21", "type": "external" } ], "go_molecular_function": "GO:0047598 7-dehydrocholesterol reductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016132 brassinosteroid biosynthetic process;GO:0016126 sterol biosynthetic process;GO:0006695 cholesterol biosynthetic process;GO:0009826 unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9LDU6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W191-1", "uniprot_id": [ { "id": "HYH_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W191", "type": "external" } ], "mass": 16899.0, "length": 149, "protein_name": "Transcription factor HY5-like", "gene_name": "HYH", "organism": "Arabidopsis", "refseq_name": "HY5-homolog", "refseq_ac": [ { "id": "NP_850604", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850604", "type": "external" } ], "gene_names_uniprotkb": "HYH; BZIP64; HY5-homolog; MKP6.27", "gene_names_refseq": "HY5-homolog; HYH", "protein_names_uniprotkb": "Transcription factor HY5-like; AtbZIP64; HY5 homolog; bZIP transcription factor 64", "protein_names_refseq": "HY5-homolog", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G17609)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10819329;11130713;11906833;12023303;27862469", "class_list": "", "function": "Transcription factor that promotes photomorphogenesis in light. Acts downstream of the light receptor network and directly affects transcription of light-induced genes. Specifically involved in the blue light specific pathway, suggesting that it participates in transmission of cryptochromes (CRY1 and CRY2) signals to downstream responses. In darkness, its degradation prevents the activation of light-induced genes., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LB41;Q9LUN6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0010224 response to UV-B;GO:0009585 red, far-red light phototransduction;GO:0010114 response to red light", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W191-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949M9-1", "uniprot_id": [ { "id": "GET3A_ARATH", "url": "https://www.uniprot.org/uniprot/Q949M9", "type": "external" } ], "mass": 39670.0, "length": 353, "protein_name": "ATPase GET3A", "gene_name": "GET3A", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001077445", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077445", "type": "external" } ], "gene_names_uniprotkb": "GET3A; F22M8.4; F22M8_4", "gene_names_refseq": "F22M8.4; F22M8_4", "protein_names_uniprotkb": "ATPase GET3A; 3.6.-.-; Arsenical pump-driving ATPase; Arsenite-stimulated ATPase; AtGET3A; Guided entry of tail-anchored proteins 3 homolog A", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01910)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;22223895;27862469;28096354", "class_list": "", "function": "ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting., [UniProtKB, HAMAP, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56ZR6", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005829 cytosol;GO:0043529 GET complex;GO:0009507 chloroplast;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0071816 tail-anchored membrane protein insertion into ER membrane;GO:0048767 root hair elongation;GO:0045048 protein insertion into ER membrane", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q949M9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949Y0-1", "uniprot_id": [ { "id": "UBP6_ARATH", "url": "https://www.uniprot.org/uniprot/Q949Y0", "type": "external" } ], "mass": 53696.0, "length": 482, "protein_name": "Ubiquitin carboxyl-terminal hydrolase 6", "gene_name": "UBP6", "organism": "Arabidopsis", "refseq_name": "ubiquitin-specific protease 6", "refseq_ac": [ { "id": "NP_564596", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564596", "type": "external" } ], "gene_names_uniprotkb": "UBP6; ATUBP6; F19C24.8; F19C24_8; UBIQUITIN-SPECIFIC PROTEASE 6; ubiquitin-specific protease 6", "gene_names_refseq": "ATUBP6; F19C24.8; F19C24_8; UBIQUITIN-SPECIFIC PROTEASE 6; UBP6; ubiquitin-specific protease 6", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase 6; 3.4.19.12; AtUBP6; Deubiquitinating enzyme 6; Ubiquitin thioesterase 6; Ubiquitin-specific-processing protease 6", "protein_names_refseq": "ubiquitin-specific protease 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51710)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11115897;11130712;14593172;15987637;22060019;25561503;27862469", "class_list": "", "function": "Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56ZE7;Q9C8H9;Q9FPT4", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0070628 proteasome binding;GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009506 plasmodesma", "go_biological_process": "GO:0016579 protein deubiquitination;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:1904293 negative regulation of ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q949Y0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZG3-1", "uniprot_id": [ { "id": "ACSA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZG3", "type": "external" } ], "mass": 49654.0, "length": 450, "protein_name": "WD repeat-containing protein ATCSA-1", "gene_name": "ATCSA-1", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": [ { "id": "NP_001031098", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031098", "type": "external" } ], "gene_names_uniprotkb": "ATCSA-1; F28L5.15; F28L5_15", "gene_names_refseq": "ATCSA-1; F28L5.15; F28L5_15", "protein_names_uniprotkb": "WD repeat-containing protein ATCSA-1; Cockayne syndrome WD repeat protein CSA homolog", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27840)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;20128879;27862469", "class_list": "", "function": "Involved in UV-B tolerance and genome integrity. In association with DDB2, is necessary for repair of UV-B-induced DNA lesions., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q680F0;Q9C6N4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031464 Cul4A-RING E3 ubiquitin ligase complex;GO:0000109 nucleotide-excision repair complex;GO:0005634 nucleus;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0006281 DNA repair;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0000209 protein polyubiquitination;GO:0006283 transcription-coupled nucleotide-excision repair;GO:0010224 response to UV-B", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q93ZG3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940S3-1", "uniprot_id": [ { "id": "UAP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q940S3", "type": "external" } ], "mass": 55992.0, "length": 505, "protein_name": "UDP-N-acetylglucosamine diphosphorylase 1", "gene_name": "GLCNAC1PUT1", "organism": "Arabidopsis", "refseq_name": "N-acetylglucosamine-1-phosphate uridylyltransferase 1", "refseq_ac": [ { "id": "NP_564372", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564372", "type": "external" } ], "gene_names_uniprotkb": "GLCNAC1PUT1; F17F8.1; GLCNA.UT1; GlcNAc1pUT1", "gene_names_refseq": "F17F8.1; GLCNA.UT1; GlcNAc1pUT1; N-acetylglucosamine-1-phosphate uridylyltransferase 1", "protein_names_uniprotkb": "UDP-N-acetylglucosamine diphosphorylase 1; 2.7.7.23; 2.7.7.83; N-acetylglucosamine-1-phosphate uridylyltransferase 1; UDP-N-acetylgalactosamine diphosphorylase 1", "protein_names_refseq": "N-acetylglucosamine-1-phosphate uridylyltransferase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31070)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;20557289;23660473;25231969;25561503;27419465;27862469;28011693", "class_list": "", "function": "Uridylyltransferase involved in the biosynthesis of UDP-glucosamine, an essential precursor for glycoprotein and glycolipid synthesis. Can use both UDP-glucosamine and the 4-epimer UDP-galactosamine as substrates, but no other sugars or NTPs (PubMed:20557289). Acts redundantly with GLCNAC1PUT2. Required for gametogenesis and embryo development (PubMed:25231969)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FYJ8", "ec_number_list": [ { "id": "2.7.7.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.9", "type": "external" }, { "id": "2.7.7.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.23", "type": "external" }, { "id": "2.7.7.83", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.83", "type": "external" } ], "go_molecular_function": "GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity;GO:0052630 UDP-N-acetylgalactosamine diphosphorylase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006048 UDP-N-acetylglucosamine biosynthetic process;GO:0006047 UDP-N-acetylglucosamine metabolic process;GO:0019276 UDP-N-acetylgalactosamine metabolic process;GO:0009553 embryo sac development;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q940S3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9XIR8-1", "uniprot_id": [ { "id": "SEM11_ARATH", "url": "https://www.uniprot.org/uniprot/Q9XIR8", "type": "external" } ], "mass": 8859.0, "length": 74, "protein_name": "Protein DELETION OF SUV3 SUPPRESSOR 1(I)", "gene_name": "DSS1(I)", "organism": "Arabidopsis", "refseq_name": "deletion of SUV3 suppressor 1(I)", "refseq_ac": [ { "id": "NP_564839", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564839", "type": "external" } ], "gene_names_uniprotkb": "DSS1(I); ATDSS1(I); F13O11.6; F13O11_6", "gene_names_refseq": "ATDSS1(I); DSS1(I); F13O11.6; F13O11_6; deletion of SUV3 suppressor 1(I)", "protein_names_uniprotkb": "Protein DELETION OF SUV3 SUPPRESSOR 1(I); AtDSS1(I); Probable 26S proteasome complex subunit sem1-1", "protein_names_refseq": "deletion of SUV3 suppressor 1(I)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G64750)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;16415210;19245862;20466843;22951400;23328941;23572148;27862469", "class_list": "", "function": "Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins., [UniProtKB, UniProtKB]; Subunit of the 26S proteasome which plays a role in ubiquitin-dependent proteolysis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000502 proteasome complex;GO:0008541 proteasome regulatory particle, lid subcomplex", "go_biological_process": "GO:0006406 mRNA export from nucleus;GO:0042542 response to hydrogen peroxide;GO:0000724 double-strand break repair via homologous recombination;GO:0043248 proteasome assembly", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9XIR8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q96288-1", "uniprot_id": [ { "id": "BBX24_ARATH", "url": "https://www.uniprot.org/uniprot/Q96288", "type": "external" } ], "mass": 27641.0, "length": 248, "protein_name": "B-box zinc finger protein 24", "gene_name": "BBX24; STO", "organism": "Arabidopsis", "refseq_name": "B-box zinc finger family protein", "refseq_ac": [ { "id": "NP_172094", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172094", "type": "external" } ], "gene_names_uniprotkb": "BBX24; STO; B-box domain protein 24; BBX24; SALT TOLERANCE; STO; T21E18.8; T21E18.9; T21E18_9", "gene_names_refseq": "B-box domain protein 24; BBX24; SALT TOLERANCE; STO; T21E18.9; T21E18_9", "protein_names_uniprotkb": "B-box zinc finger protein 24; Salt tolerance protein", "protein_names_refseq": "B-box zinc finger family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06040)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11018516;11130712;11226162;12909688;14593172;17605755;18540109;19920209;21685177;22410790;23624715;27862469;8662738", "class_list": "", "function": "Acts as a negative regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation (PubMed:17605755, PubMed:18540109, PubMed:21685177). BBX24/STO and BBX25/STH function as transcriptional corepressors of HY5 activity, leading to the down-regulation of BBX22 expression. BBX24/STO acts additively with BBX25/STH during de-etiolation and the hypocotyl shade avoidance response (PubMed:23624715). Functions as a negative regulator of photomorphogenic UV-B responses by interacting with both COP1 and HY5 (PubMed:22410790). May act as a transcription factor in the salt-stress response (PubMed:12909688)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009416 response to light stimulus;GO:0009640 photomorphogenesis;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q96288-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SL04-1", "uniprot_id": [ { "id": "ATG8D_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SL04", "type": "external" } ], "mass": 13907.0, "length": 120, "protein_name": "Autophagy-related protein 8d", "gene_name": "ATG8D", "organism": "Arabidopsis", "refseq_name": "Ubiquitin-like superfamily protein", "refseq_ac": [ { "id": "NP_178631", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178631", "type": "external" } ], "gene_names_uniprotkb": "ATG8D; APG8D; T20G20.2; T20G20_2", "gene_names_refseq": "ATG8D; T20G20.2; T20G20_2", "protein_names_uniprotkb": "Autophagy-related protein 8d; AtAPG8d; Autophagy-related ubiquitin-like modifier ATG8d; Protein autophagy 8d", "protein_names_refseq": "Ubiquitin-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G05630)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;12114572;14593172;15178341;15494556;21606687;27862469", "class_list": "", "function": "Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBA9", "ec_number_list": [], "go_molecular_function": "GO:0008429 phosphatidylethanolamine binding", "go_cellular_component": "GO:0000421 autophagosome membrane;GO:0005634 nucleus;GO:0005874 microtubule;GO:0031410 cytoplasmic vesicle;GO:0005776 autophagosome", "go_biological_process": "GO:0097352 autophagosome maturation;GO:0000045 autophagosome assembly;GO:0015031 protein transport;GO:0000423 mitophagy;GO:0006995 cellular response to nitrogen starvation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9SL04-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VB2-1", "uniprot_id": [ { "id": "AT18A_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VB2", "type": "external" } ], "mass": 46800.0, "length": 425, "protein_name": "Autophagy-related protein 18a", "gene_name": "ATG18A", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": [ { "id": "NP_567132", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567132", "type": "external" } ], "gene_names_uniprotkb": "ATG18A; ATG18a; AtATG18a; F26K9_200; PEUP2; autophagy 18a", "gene_names_refseq": "ATG18a; AtATG18a; PEROXISOME UNUSUAL POSITIONING 2; PEUP2; autophagy 18a", "protein_names_uniprotkb": "Autophagy-related protein 18a; AtATG18a; Protein PEROXISOME UNUSUAL POSITIONING 2", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G62770)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130713;14593172;15860012;17098847;19587533;21332848;21395886;21847024;22532286;23111157;23328941;23660473;27862469;28011693;29167316", "class_list": "", "function": "The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy by autophagosome formation during nutrient deprivation, senescence and under abiotic stresses, including oxidative, high salt and osmotic stress conditions. Cooperates with jasmonate- and WRKY33-mediated signaling pathways in the regulation of plant defense responses to necrotrophic pathogens., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q3EAF7;Q9LZI8", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0080025 phosphatidylinositol-3,5-bisphosphate binding;GO:0032266 phosphatidylinositol-3-phosphate binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005774 vacuolar membrane;GO:0034045 phagophore assembly site membrane", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0006979 response to oxidative stress;GO:0015031 protein transport;GO:0042594 response to starvation;GO:0006914 autophagy", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q93VB2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M591-1", "uniprot_id": [ { "id": "CRD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M591", "type": "external" } ], "mass": 47631.0, "length": 409, "protein_name": "Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic", "gene_name": "CRD1", "organism": "Arabidopsis", "refseq_name": "dicarboxylate diiron protein, putative (Crd1)", "refseq_ac": [ { "id": "NP_191253", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191253", "type": "external" } ], "gene_names_uniprotkb": "CRD1; ACSF; AT103; CHL27; COPPER RESPONSE DEFECT 1; F24I3.20; T8M16.1; ZIP", "gene_names_refseq": "ACSF; CHL27; COPPER RESPONSE DEFECT 1; CRD1; T8M16.1", "protein_names_uniprotkb": "Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic; 1.14.13.81; AtCrd1; AtZIP; Copper response defect 1 protein; Dicarboxylate diiron protein; MPE-cyclase; Mg-protoporphyrin IX monomethyl ester oxidative cyclase", "protein_names_refseq": "dicarboxylate diiron protein, putative (Crd1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G56940)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10811605;11130713;14673103;18682427;22212719;23820729;25561503;27862469;29443418;9339905;9449833", "class_list": "", "function": "Catalytic component of the MgProto monomethylester (MgProtoME) cyclase complex that catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis (PubMed:14673103, PubMed:18682427, PubMed:29443418). Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) (PubMed:14673103, PubMed:18682427, PubMed:29443418)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O04051;Q38892;Q8GUS3;Q9M1K4", "ec_number_list": [ { "id": "1.14.13.81", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.13.81", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0046872 metal ion binding;GO:0048529 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0009658 chloroplast organization;GO:0015979 photosynthesis;GO:0015995 chlorophyll biosynthetic process;GO:1901401 regulation of tetrapyrrole metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q9M591-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SQX9-1", "uniprot_id": [ { "id": "NAC50_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SQX9", "type": "external" } ], "mass": 50355.0, "length": 447, "protein_name": "NAC domain containing protein 50", "gene_name": "NAC050", "organism": "Arabidopsis", "refseq_name": "NAC domain containing protein 50", "refseq_ac": [ { "id": "NP_566374", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566374", "type": "external" } ], "gene_names_uniprotkb": "NAC050; ANAC050; F13M14.24; F18K10.5; NAC50", "gene_names_refseq": "ANAC050; NAC domain containing protein 50; NAC050", "protein_names_uniprotkb": "NAC domain containing protein 50; ANAC050", "protein_names_refseq": "NAC domain containing protein 50", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10480)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130713;14593172;15029955;18463617;19376835;20466843;21768351;23111157;23328941;23660473;23776212;24045019;25561503;25578968;26617990;27862469;28011693;30833711", "class_list": "", "function": "Transcriptional repressor that binds to the motif 5'-(C/T)A(C/A)G-3' in the promoter of target genes (PubMed:25578968). Also binds to the 5'-CTTGNNNNNCAAG-3' consensus sequence in chromatin (PubMed:26617990). Can bind to the mitochondrial dysfunction motif (MDM) present in the upstream regions of mitochondrial dysfunction stimulon (MDS) genes involved in mitochondrial retrograde regulation (MRR) (PubMed:24045019). Together with NAC051/NAC052 and JMJ14, regulates gene expression and flowering time by associating with the histone demethylase JMJ14, probably by the promotion of RNA-mediated gene silencing (PubMed:25578968, PubMed:26617990)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4J3S8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0045814 negative regulation of gene expression, epigenetic;GO:0060966 regulation of gene silencing by regulatory ncRNA", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q9SQX9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SVD7-1", "uniprot_id": [ { "id": "UEV1D_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SVD7", "type": "external" } ], "mass": 16533.0, "length": 146, "protein_name": "Ubiquitin-conjugating enzyme E2 variant 1D", "gene_name": "UEV1D-4; UEV1D", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "UEV1D-4; UEV1D; F22O6.60; F3C22.2; MMS2 ZWEI HOMOLOGUE 4; MMZ4; UBIQUITIN E2 VARIANT 1D; UEV1D; ubiquitin E2 variant 1D-4", "gene_names_refseq": "", "protein_names_uniprotkb": "Ubiquitin-conjugating enzyme E2 variant 1D; Protein MMS ZWEI HOMOLOG 4; Ubc enzyme variant 1D", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G52560)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;14593172;17586653;18178771;19376835;23111157;23572148;25561503;27862469;28011693", "class_list": "", "function": "Has no ubiquitin ligase activity on its own. The heterodimer with UBC catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. May play a role in the control of progress through the cell cycle and differentiation. Involved in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MSC0;Q3EAL0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031371 ubiquitin conjugating enzyme complex;GO:0005634 nucleus;GO:0005829 cytosol;GO:0031372 UBC13-MMS2 complex", "go_biological_process": "GO:0006974 DNA damage response;GO:0070534 protein K63-linked ubiquitination;GO:0006301 DNA damage tolerance;GO:1902916 positive regulation of protein polyubiquitination", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9SVD7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Z16-1", "uniprot_id": [ { "id": "RPN2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Z16", "type": "external" } ], "mass": 74668.0, "length": 691, "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2", "gene_name": "HAP6; RPN2", "organism": "Arabidopsis", "refseq_name": "ribophorin II (RPN2) family protein", "refseq_ac": [ { "id": "NP_001190785", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190785", "type": "external" } ], "gene_names_uniprotkb": "HAP6; RPN2; F7J7.90; F7J7_90; HAP6; HAPLESS 6; RIBOPHORIN II; RPN2", "gene_names_refseq": "F7J7.90; F7J7_90; HAP6; HAPLESS 6; RIBOPHORIN II; RPN2", "protein_names_uniprotkb": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Protein HAPLESS 6; RPN-II; Ribophorin II; Ribophorin-2", "protein_names_refseq": "ribophorin II (RPN2) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21150)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;15514068;17272265;27862469", "class_list": "", "function": "Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49556", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0008250 oligosaccharyltransferase complex", "go_biological_process": "GO:0009409 response to cold;GO:0006487 protein N-linked glycosylation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q93Z16-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VY3-1", "uniprot_id": [ { "id": "NAC72_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VY3", "type": "external" } ], "mass": 33177.0, "length": 297, "protein_name": "NAC domain-containing protein 72", "gene_name": "NAC072; RD26", "organism": "Arabidopsis", "refseq_name": "NAC (No Apical Meristem) domain transcriptional regulator superfamily protein", "refseq_ac": [ { "id": "NP_001078452", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078452", "type": "external" } ], "gene_names_uniprotkb": "NAC072; RD26; ANAC072; AtRD26; F27G19.10; F27G19_10; RD26; RESPONSIVE TO DESICCATION 26", "gene_names_refseq": "ANAC072; Arabidopsis NAC domain containing protein 72; AtRD26; F27G19.10; F27G19_10; RD26; RESPONSIVE TO DESICCATION 26", "protein_names_uniprotkb": "NAC domain-containing protein 72; ANAC072; Protein RESPONSIVE TO DESICCATION 26", "protein_names_refseq": "NAC (No Apical Meristem) domain transcriptional regulator superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G27410)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;15029955;15319476;16581911;27862469;29659022", "class_list": "", "function": "Transcription factors that bind specifically to the 5'-CATGTG-3' motif and with bipartite regions with 5'-CGTr-3' and 5'-YACG-3' as cores (PubMed:15319476, PubMed:29659022). Involved in the regulation of metabolic reprogramming during senescence by promoting the chloroplast protein degradation and the catabolism of lysine, phytol and free fatty acids via the induction of CV, LKR/SDH and PES1 expression (PubMed:29659022). Also triggers the degradation of starch and the accumulation of mono- and disaccharides during senescence by enhancing the expression of AMY1, SFP1 and SWEET15 (PubMed:29659022)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8H141;Q94II4;Q9SZR8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding;GO:1990841 promoter-specific chromatin binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93VY3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949V6-1", "uniprot_id": [ { "id": "ARI1_ARATH", "url": "https://www.uniprot.org/uniprot/Q949V6", "type": "external" } ], "mass": 68789.0, "length": 597, "protein_name": "Probable E3 ubiquitin-protein ligase ARI1", "gene_name": "ARI1", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_567966", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567966", "type": "external" } ], "gene_names_uniprotkb": "ARI1; ARABIDOPSIS ARIADNE 1; ARIADNE 1; ATARI1; F10M10.140; F10M10_140", "gene_names_refseq": "ARABIDOPSIS ARIADNE 1; ARI1; ARIADNE 1; ATARI1; F10M10.140; F10M10_140", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase ARI1; 2.3.2.31; ARIADNE-like protein ARI1; Protein ariadne homolog 1; RING-type E3 ubiquitin transferase ARI1", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34370)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;12446796;12529512;14593172;25561503;27862469", "class_list": "", "function": "Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZ02", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0031624 ubiquitin conjugating enzyme binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q949V6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A99-1", "uniprot_id": [ { "id": "CGF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A99", "type": "external" } ], "mass": 38527.0, "length": 365, "protein_name": "Chloroplast protein FOR GROWTH AND FERTILITY 1", "gene_name": "CGF1", "organism": "Arabidopsis", "refseq_name": "high-affinity nickel-transport family protein", "refseq_ac": [ { "id": "NP_567976", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567976", "type": "external" } ], "gene_names_uniprotkb": "CGF1; M4E13.135; T12J5.1", "gene_names_refseq": "T12J5.1", "protein_names_uniprotkb": "Chloroplast protein FOR GROWTH AND FERTILITY 1", "protein_names_refseq": "high-affinity nickel-transport family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35080)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;19423640;27862469;32306898", "class_list": "", "function": "Together with CGF2, essential protein which supports female gametogenesis and embryogenesis, probably by securing local energy supply., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG13;F4JM84;O65599", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0009658 chloroplast organization;GO:0048366 leaf development;GO:0048481 plant ovule development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q94A99-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZF6-1", "uniprot_id": [ { "id": "AIRP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZF6", "type": "external" } ], "mass": 16940.0, "length": 153, "protein_name": "E3 ubiquitin-protein ligase AIRP1", "gene_name": "AIRP1", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_001329832", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329832", "type": "external" } ], "gene_names_uniprotkb": "AIRP1; ABA Insensitive RING Protein 1; AtAIRP1; F16G20.150; F16G20_150", "gene_names_refseq": "ABA Insensitive RING Protein 1; AIRP1; AtAIRP1; F16G20.150; F16G20_150", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase AIRP1; 2.3.2.27; AtAIRP1; Protein ABA INSENSITIVE RING PROTEIN 1; RING-type E3 ubiquitin transferase AIRP1", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23450)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;15644464;20884812;27862469", "class_list": "", "function": "Possesses E3 ubiquitin-protein ligase activity in vitro when associated with the E2 enzyme UBC8 in vitro (PubMed:15644464, PubMed:20884812). Plays combinatory roles with AIRP2 in the positive regulation of the abscisic acid-mediated drought stress response (PubMed:20884812)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81741", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0010729 positive regulation of hydrogen peroxide biosynthetic process;GO:0009414 response to water deprivation;GO:0009789 positive regulation of abscisic acid-activated signaling pathway;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q93ZF6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YP7-1", "uniprot_id": [ { "id": "COQ2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YP7", "type": "external" } ], "mass": 44604.0, "length": 407, "protein_name": "4-hydroxybenzoate polyprenyltransferase, mitochondrial", "gene_name": "PPT1", "organism": "Arabidopsis", "refseq_name": "polyprenyltransferase 1", "refseq_ac": [ { "id": "NP_001320050", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320050", "type": "external" } ], "gene_names_uniprotkb": "PPT1; AtPPT1; F9D16.130; F9D16_130; polyprenyltransferase 1", "gene_names_refseq": "4-HYDROXYBENZOATE POLYPRENYL DIPHOSPHATE TRANSFERASE; AtPPT1; F9D16.130; F9D16_130; PPT1; polyprenyltransferase 1", "protein_names_uniprotkb": "4-hydroxybenzoate polyprenyltransferase, mitochondrial; 2.5.1.39; 4-HB polyprenyltransferase; 4-hydroxybenzoate nonaprenyltransferase; 4HPT; AtPPT1; PHB:PPT; PHB:polyprenyltransferase; Para-hydroxybenzoate--polyprenyltransferase; Polyprenyltransferase 1", "protein_names_refseq": "polyprenyltransferase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23660)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;14593172;15604701;27862469", "class_list": "", "function": "Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate., [UniProtKB, HAMAP, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FRU7;Q9SUR1", "ec_number_list": [ { "id": "2.5.1.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.39", "type": "external" } ], "go_molecular_function": "GO:0008412 4-hydroxybenzoate polyprenyltransferase activity;GO:0102930 4-hydroxybenzoate geranyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0006744 ubiquinone biosynthetic process;GO:0008299 isoprenoid biosynthetic process;GO:0009625 response to insect;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q93YP7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZA0-1", "uniprot_id": [ { "id": "NYC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZA0", "type": "external" } ], "mass": 54845.0, "length": 496, "protein_name": "Probable chlorophyll(ide) b reductase NYC1, chloroplastic", "gene_name": "NYC1", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": [ { "id": "NP_567400", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567400", "type": "external" } ], "gene_names_uniprotkb": "NYC1; F17N18.140; F17N18_140; NON-YELLOW COLORING 1", "gene_names_refseq": "F17N18.140; F17N18_140; NON-YELLOW COLORING 1; NYC1", "protein_names_uniprotkb": "Probable chlorophyll(ide) b reductase NYC1, chloroplastic; 1.1.1.294; AtNYC1; Protein NON-YELLOW COLORING 1", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13250)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;17416733;19403948;22366162;23200839;27862469", "class_list": "", "function": "Involved in chlorophyll b degradation. Belongs to the chlorophyll catabolic enzymes (CCEs)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVQ2", "ec_number_list": [ { "id": "1.1.1.294", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.294", "type": "external" } ], "go_molecular_function": "GO:0034256 chlorophyll(ide) b reductase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0015996 chlorophyll catabolic process;GO:0010304 PSII associated light-harvesting complex II catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93ZA0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZG9-1", "uniprot_id": [ { "id": "FKB53_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZG9", "type": "external" } ], "mass": 52223.0, "length": 477, "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP53", "gene_name": "FKBP53", "organism": "Arabidopsis", "refseq_name": "FK506 BINDING PROTEIN 53", "refseq_ac": [ { "id": "NP_567717", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567717", "type": "external" } ], "gene_names_uniprotkb": "FKBP53; ATFKBP53; FK506 BINDING PROTEIN 53; T30C3.20; T30C3_20", "gene_names_refseq": "ATFKBP53; FK506 BINDING PROTEIN 53; FKBP53; T30C3.20; T30C3_20", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase FKBP53; 5.2.1.8; AtFKBP53; FK506-binding protein 53; Immunophilin FKBP53; PPIase FKBP53; Rotamase", "protein_names_refseq": "FK506 BINDING PROTEIN 53", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25340)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;14593172;15047905;17272265;19376835;20142844;20466843;22074104;23111157;23572148;23660473;23776212;25561503;26091701;26187819;27862469;30833711", "class_list": "", "function": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Histone chaperone possibly involved in H3/H4 deposition to the nucleosome. Associates with 18S rDNA chromatin and negatively regulates the level of its expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STK2", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0042393 histone binding;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006334 nucleosome assembly", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q93ZG9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FEN9-1", "uniprot_id": [ { "id": "SHL_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FEN9", "type": "external" } ], "mass": 26122.0, "length": 228, "protein_name": "Chromatin remodeling protein SHL", "gene_name": "SHL", "organism": "Arabidopsis", "refseq_name": "PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein", "refseq_ac": [ { "id": "NP_568053", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568053", "type": "external" } ], "gene_names_uniprotkb": "SHL; F19H22.200; SHL1; T22F8.2; short life", "gene_names_refseq": "SHL1; T22F8.2; short life", "protein_names_uniprotkb": "Chromatin remodeling protein SHL; Protein SHORT LIFE", "protein_names_refseq": "PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39100)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11129039;14593172;15082927;25281686;25387881;25561503;27862469", "class_list": "", "function": "Chromatin remodeling factor that binds to methylated histone (e.g. H3K4me2/3) to prevent their acetylation (e.g. H3K9K14Ac), likely by recruiting histone deacetylase (HDAC) complexes, and thus regulate the transcription of target genes (PubMed:25281686). Required during development and for fertility, probably by modulating developmental gene expression (PubMed:11129039, PubMed:15082927, PubMed:25281686). Promotes development speed, but at fitness cost (PubMed:11129039). Involved in the chromatin-mediated repression of floral initiation and controls genes regulating flowering. Negatively regulates the expression of the floral integrator SOC1, by preventing high levels of H3 acetylation, thus maintaining an inactive chromatin conformation (PubMed:25281686)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L975;Q9SVI4", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0140002 histone H3K4me3 reader activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009791 post-embryonic development;GO:0045814 negative regulation of gene expression, epigenetic;GO:2000028 regulation of photoperiodism, flowering;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9FEN9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FKW6-1", "uniprot_id": [ { "id": "FNRL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FKW6", "type": "external" } ], "mass": 40326.0, "length": 360, "protein_name": "Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic", "gene_name": "FNR1; LFNR1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "FNR1; LFNR1; ATLFNR1; K2A18.27; K2A18_27; LEAF FNR 1; LFNR1; PETH1", "gene_names_refseq": "", "protein_names_uniprotkb": "Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic; 1.18.1.2; AtLFNR1; FNR-1; Leaf FNR 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66190)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10948265;11130714;14593172;17335513;18243102;19376835;20040542;20934402;21768351;22092075;23572148;24043427;25561503;26941088;27862469;29443418;30833711;9679202", "class_list": "", "function": "Plays a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power (PubMed:17335513, Ref.7). Probable electron donor required for the MgProto monomethylester (MgProtoME) cyclase complex reaction to form protochlorophyllide, thus connecting chlorophyll synthesis with photosynthetic activity (PubMed:29443418)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWE2;Q9SUJ3", "ec_number_list": [ { "id": "1.18.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.18.1.2", "type": "external" } ], "go_molecular_function": "GO:0009055 electron transfer activity;GO:0019904 protein domain specific binding;GO:0004324 ferredoxin-NADP+ reductase activity;GO:0008266 poly(U) RNA binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0022900 electron transport chain;GO:0009767 photosynthetic electron transport chain;GO:1901463 regulation of tetrapyrrole biosynthetic process;GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q9FKW6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FLP0-1", "uniprot_id": [ { "id": "MA651_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FLP0", "type": "external" } ], "mass": 65785.0, "length": 587, "protein_name": "65-kDa microtubule-associated protein 1", "gene_name": "MAP65-1", "organism": "Arabidopsis", "refseq_name": "microtubule-associated proteins 65-1", "refseq_ac": [ { "id": "NP_001332196", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332196", "type": "external" } ], "gene_names_uniprotkb": "MAP65-1; ATMAP65-1; MCO15.18; MCO15_18", "gene_names_refseq": "ATMAP65-1; MAP65-1; MCO15.18; MCO15_18; microtubule-associated proteins 65-1", "protein_names_uniprotkb": "65-kDa microtubule-associated protein 1; AtMAP65-1", "protein_names_refseq": "microtubule-associated proteins 65-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G55230)", "pathway_count": 1, "publication_count": 41, "publication_id_list": "11130714;11701884;12516862;14593172;15273298;15469496;15557096;15908607;16014384;16098102;16847052;17394772;17504815;18463617;18667529;19060108;19245862;19376835;20215588;20466843;21768351;22440515;23111157;23172892;23328941;23572148;23660473;23776212;23820729;24601666;24924143;25561503;26091701;26187819;27532006;27862469;28011693;29167316;29654922;30833711;9628582", "class_list": "", "function": "Microtubule-associated protein that bundle and stabilize adjacent microtubules (MT) of the cell cortex. Enhances MT nucleation. Can also bind to tubulin dimers and promotes their polymerization. Confers MT resistance to the drug propyzamide and cold conditions. Plays a role in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. Represses metaphase spindle organization and the transition to anaphase in dephosphorylated active form. Promotes the formation of a planar network of antiparallel microtubules. May be involved in stomatal movement modulation by regulating the dynamic and arrangement of cortical MT., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 22, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0005874 microtubule", "go_biological_process": "GO:0046785 microtubule polymerization;GO:0007020 microtubule nucleation;GO:0000226 microtubule cytoskeleton organization;GO:0031116 positive regulation of microtubule polymerization;GO:0001578 microtubule bundle formation", "synthesized_glycan_count": 0, "hit_score": 4.2, "record_id": "Q9FLP0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940X7-1", "uniprot_id": [ { "id": "RBX1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q940X7", "type": "external" } ], "mass": 13238.0, "length": 118, "protein_name": "RING-box protein 1a", "gene_name": "RBX1A; RBX1", "organism": "Arabidopsis", "refseq_name": "RING-box 1", "refseq_ac": [ { "id": "NP_568396", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568396", "type": "external" } ], "gene_names_uniprotkb": "RBX1A; RBX1; ATRBX1; F7C8.160; F7C8_160; HRT1; REGULATOR OF CULLINS-1; RING-BOX 1; RING-box 1; ROC1", "gene_names_refseq": "ATRBX1; F7C8.160; F7C8_160; HRT1; RBX1; REGULATOR OF CULLINS-1; RING-BOX 1; RING-box 1; ROC1", "protein_names_uniprotkb": "RING-box protein 1a; 1; At-Rbx1; Protein RING of cullins 1; RBX1-2; RBX1a-At", "protein_names_refseq": "RING-box 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20570)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11910074;12215511;12381738;12682009;14593172;16844902;22223895;27862469", "class_list": "", "function": "Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The SCF complex plays a crucial role in regulating response to auxin and is essential for growth and development. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme, to the complex and brings it into close proximity to the substrate. Promotes the neddylation of CUL1., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0097602 cullin family protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex;GO:0031461 cullin-RING ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q940X7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949W8-1", "uniprot_id": [ { "id": "XK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q949W8", "type": "external" } ], "mass": 61295.0, "length": 558, "protein_name": "Xylulose kinase 2", "gene_name": "XK-2; XK2", "organism": "Arabidopsis", "refseq_name": "xylulose kinase-2", "refseq_ac": [ { "id": "NP_199776", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199776", "type": "external" } ], "gene_names_uniprotkb": "XK-2; XK2; MNI5.3; MNI5_3; XK-2; XK2; XYLULOSE KINASE 2; xylulose kinase-2", "gene_names_refseq": "MNI5.3; MNI5_3; XK-2; XK2; XYLULOSE KINASE 2; xylulose kinase-2", "protein_names_uniprotkb": "Xylulose kinase 2; 1-Deoxy-D-Xylulokinase; 2.7.1.17; Atxk-2; DXK; Xylulokinase 2", "protein_names_refseq": "xylulose kinase-2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49650)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11130714;14593172;16920870;27862469;28011693", "class_list": "", "function": "Mediates 1-deoxy-D-xylulose (DX) phosphorylation in the cytoplasm prior to the translocation of 1-deoxy-D-xylulose 5-phosphate into plastids. Can also phosphorylate D-xylulose (Xyl). Uses preferentially ATP as cosubstrate., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LT51", "ec_number_list": [ { "id": "2.7.1.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.17", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004856 D-xylulokinase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0005997 xylulose metabolic process;GO:0042732 D-xylose metabolic process;GO:0016117 carotenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q949W8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940X9-1", "uniprot_id": [ { "id": "LRP1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q940X9", "type": "external" } ], "mass": 91377.0, "length": 826, "protein_name": "La-related protein 1A", "gene_name": "LARP1A", "organism": "Arabidopsis", "refseq_name": "LA RNA-binding protein", "refseq_ac": [ { "id": "NP_568409", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568409", "type": "external" } ], "gene_names_uniprotkb": "LARP1A; AtLARP1a; LARP1a; La related protein 1a; T10F18.190; T10F18_190", "gene_names_refseq": "AtLARP1a; LARP1a; La related protein 1a; T10F18.190; T10F18_190", "protein_names_uniprotkb": "La-related protein 1A; AtLARP1a", "protein_names_refseq": "LA RNA-binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21160)", "pathway_count": 1, "publication_count": 27, "publication_id_list": "11130714;14593172;18433157;18463617;19245862;19299548;19376835;20466843;21768351;22223895;22440515;23111157;23172892;23328941;23572148;23660473;23776212;24332370;24601666;25561503;26091701;26187819;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Required for acclimation and survival during thermal stress. Heat-specific cofactor of XRN4 required for its targeting to polysomes and subsequent rapid degradation of seedling transcriptome during the early steps of the heat stress response., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 34, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q56WZ6", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0045182 translation regulator activity;GO:0048027 mRNA 5'-UTR binding;GO:0000339 RNA cap binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000932 P-body;GO:0010494 cytoplasmic stress granule;GO:0009536 plastid", "go_biological_process": "GO:0048255 mRNA stabilization;GO:0042254 ribosome biogenesis;GO:0009749 response to glucose;GO:0006402 mRNA catabolic process;GO:1903432 regulation of TORC1 signaling", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "Q940X9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LFR3-1", "uniprot_id": [ { "id": "GASAE_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LFR3", "type": "external" } ], "mass": 29138.0, "length": 275, "protein_name": "Gibberellin-regulated protein 14", "gene_name": "GASA14", "organism": "Arabidopsis", "refseq_name": "Gibberellin-regulated family protein", "refseq_ac": [ { "id": "NP_196996", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196996", "type": "external" } ], "gene_names_uniprotkb": "GASA14; A-stimulated in Arabidopsis 14; F2G14.40; F2G14_40", "gene_names_refseq": "A-stimulated in Arabidopsis 14; F2G14.40; F2G14_40; GASA14", "protein_names_uniprotkb": "Gibberellin-regulated protein 14; GAST1 protein homolog 14", "protein_names_refseq": "Gibberellin-regulated family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G14920)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;17284469;27862469", "class_list": "", "function": "Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBI7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0009536 plastid", "go_biological_process": "GO:0009651 response to salt stress;GO:2000377 regulation of reactive oxygen species metabolic process;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009737 response to abscisic acid;GO:0009739 response to gibberellin", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9LFR3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W1X2-1", "uniprot_id": [ { "id": "PDXK_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W1X2", "type": "external" } ], "mass": 34043.0, "length": 309, "protein_name": "Pyridoxal kinase", "gene_name": "PK; SOS4", "organism": "Arabidopsis", "refseq_name": "pfkB-like carbohydrate kinase family protein", "refseq_ac": [ { "id": "NP_001078677", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078677", "type": "external" } ], "gene_names_uniprotkb": "PK; SOS4; ATSOS4; K18L3.1; K18L3.2; K18L3_1; PDXK; SALT OVERLY SENSITIVE 4; SOS4", "gene_names_refseq": "ATSOS4; K18L3.1; K18L3_1; SALT OVERLY SENSITIVE 4; SOS4", "protein_names_uniprotkb": "Pyridoxal kinase; 2.7.1.35; Protein SALT OVERLY SENSITIVE 4; Pyridoxal kinase-like protein SOS4; Pyridoxine kinase", "protein_names_refseq": "pfkB-like carbohydrate kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G37850)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11910005;12068103;12244454;14593172;22223895;27862469;9734815", "class_list": "", "function": "Catalyzes the transfer of a phosphate group from ATP to the 5-hydroxylmethyl group of pyridoxal to form the biologically active pyridoxal phosphate, an active form of vitamin B6 (PubMed:12068103, PubMed:12244454). Required for Na(+) and K(+) homeostasis and for salt tolerance (PubMed:11910005). Involved in root hair development, both for initiation and tip growth (PubMed:12068103)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94EN4;Q9FKE1", "ec_number_list": [ { "id": "2.7.1.35", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.35", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0008478 pyridoxal kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0042538 hyperosmotic salinity response;GO:0008615 pyridoxine biosynthetic process;GO:0009443 pyridoxal 5'-phosphate salvage;GO:0010054 trichoblast differentiation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8W1X2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LZL7-1", "uniprot_id": [ { "id": "Q9LZL7_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LZL7", "type": "external" } ], "mass": 36141.0, "length": 324, "protein_name": "Fes1C", "gene_name": "FES1C", "organism": "Arabidopsis", "refseq_name": "Fes1C", "refseq_ac": [ { "id": "NP_001332564", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332564", "type": "external" } ], "gene_names_uniprotkb": "FES1C; Fes1C; T7H20.200; T7H20_200", "gene_names_refseq": "Fes1C; T7H20.200; T7H20_200", "protein_names_uniprotkb": "Fes1C", "protein_names_refseq": "Fes1C", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02150)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130714;22074104;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000774 adenyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9LZL7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4Q5-1", "uniprot_id": [ { "id": "RIN3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4Q5", "type": "external" } ], "mass": 64518.0, "length": 577, "protein_name": "E3 ubiquitin protein ligase RIN3", "gene_name": "RIN3", "organism": "Arabidopsis", "refseq_name": "RPM1 interacting protein 3", "refseq_ac": [ { "id": "NP_568760", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568760", "type": "external" } ], "gene_names_uniprotkb": "RIN3; MFG13.16; MFG13_16; RPM1 interacting protein 3", "gene_names_refseq": "MFG13.16; MFG13_16; RIN3; RPM1 interacting protein 3", "protein_names_uniprotkb": "E3 ubiquitin protein ligase RIN3; 2.3.2.27; RING-type E3 ubiquitin transferase RIN3; RPM1-interacting protein 3", "protein_names_refseq": "RPM1 interacting protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G51450)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;16212605;27862469", "class_list": "", "function": "E3 ubiquitin protein ligase that acts as a positive regulator of RPM1- and RPS2-dependent hypersensitive response (HR), in association with RIN2. Probably not required for RPM1 degradation during HR., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGM8", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity;GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0009626 plant-type hypersensitive response;GO:0034052 positive regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8W4Q5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VM9-1", "uniprot_id": [ { "id": "THOC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VM9", "type": "external" } ], "mass": 68334.0, "length": 599, "protein_name": "THO complex subunit 1", "gene_name": "THO1", "organism": "Arabidopsis", "refseq_name": "nuclear matrix protein-like protein", "refseq_ac": [ { "id": "NP_568219", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568219", "type": "external" } ], "gene_names_uniprotkb": "THO1; AtHPR1; AtTHO1; EMU; HPR1; MYH9.7; MYH9_7", "gene_names_refseq": "AtHPR1; AtTHO1; HPR1; MYH9.7; MYH9_7; THO1", "protein_names_uniprotkb": "THO complex subunit 1; AtHPR1; AtTHO1; HPR1 homolog", "protein_names_refseq": "nuclear matrix protein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09860)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10048488;11130714;14593172;20634427;20668032;20798330;22035198;23776212;25561503;27862469", "class_list": "", "function": "Acts as a component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export. Contributes to the integrity of the endogenous trans-acting small interfering RNA (ta-siRNA) pathway. May process or transport a long RNA molecule so that it can be a template for secondary siRNA production. May participate in the trafficking of siRNA precursors to the ARGONAUTE catalytic center. Required for the generation of functional messenger ribonucleoproteins (mRNPs). Plays an important roles in plant innate immunity., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8H134;Q9FIC0", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0000347 THO complex;GO:0005634 nucleus;GO:0000445 THO complex part of transcription export complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0006406 mRNA export from nucleus;GO:0008380 RNA splicing;GO:0031047 regulatory ncRNA-mediated gene silencing;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q93VM9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4P1-1", "uniprot_id": [ { "id": "CDKC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4P1", "type": "external" } ], "mass": 57129.0, "length": 513, "protein_name": "Cyclin-dependent kinase C-2", "gene_name": "CDKC-2; CDKC2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CDKC-2; CDKC2; CDKC:2; Cyclin-dependent kinase C:2; MXK3.19; MXK3_19", "gene_names_refseq": "", "protein_names_uniprotkb": "Cyclin-dependent kinase C-2; 2.7.11.22; 2.7.11.23; 2; CDKC", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64960)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10718197;11130714;11971144;12678503;14593172;17094738;18433157;18463617;20466843;23111157;23328941;23572148;23660473;23776212;25561503;27862469;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LV82", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0004693 cyclin-dependent protein serine/threonine kinase activity;GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016604 nuclear body;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0050792 regulation of viral process;GO:0006397 mRNA processing;GO:0009615 response to virus;GO:0009414 response to water deprivation;GO:0032968 positive regulation of transcription elongation by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8W4P1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VJ2-1", "uniprot_id": [ { "id": "IRE1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VJ2", "type": "external" } ], "mass": 99616.0, "length": 881, "protein_name": "Serine/threonine-protein kinase/endoribonuclease IRE1b", "gene_name": "IRE1-1; IRE1B", "organism": "Arabidopsis", "refseq_name": "inositol requiring 1-1", "refseq_ac": [ { "id": "NP_568444", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568444", "type": "external" } ], "gene_names_uniprotkb": "IRE1-1; IRE1B; ATIRE1-1; AtIRE1b; IRE1-1; IRE1B; K16H17.7; K16H17_7; inositol requiring 1-1", "gene_names_refseq": "ARABIDOPSIS THALIANA INOSITOL REQUIRING 1-1; ATIRE1-1; AtIRE1b; IRE1-1; IRE1B; K16H17.7; K16H17_7; inositol requiring 1-1", "protein_names_uniprotkb": "Serine/threonine-protein kinase/endoribonuclease IRE1b; AtIRE1-1; Endoplasmic reticulum-to-nucleus signaling 1-1; Inositol-requiring protein 1-1; Serine/threonine-protein kinase/endoribonuclease IRE1-1", "protein_names_refseq": "inositol requiring 1-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G24360)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10048488;11130714;11706177;12020828;12805585;14593172;21482766;21914012;22355548;22359644;22701744;22796463;23111157;23175745;27862469", "class_list": "", "function": "Senses unfolded proteins in the lumen of the endoplasmic reticulum via its N-terminal domain which leads to enzyme auto-activation. The active endoribonuclease domain splices bZIP60 mRNA to generate a new C-terminus, converting it into a potent unfolded-protein response transcriptional activator which then induces transcription of UPR target genes. Involved in organ growth regulation. Plays a role in plant immunity and abiotic stress responses. Required for ER stress-induced autophagy., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q94IG5;Q9FIN6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0051082 unfolded protein binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006397 mRNA processing;GO:0036498 IRE1-mediated unfolded protein response;GO:0006914 autophagy;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q93VJ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZV9-1", "uniprot_id": [ { "id": "PTA7_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZV9", "type": "external" } ], "mass": 18732.0, "length": 161, "protein_name": "Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7", "gene_name": "PTAC7", "organism": "Arabidopsis", "refseq_name": "plastid transcriptionally active7", "refseq_ac": [ { "id": "NP_001190379", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190379", "type": "external" } ], "gene_names_uniprotkb": "PTAC7; MOP9.14; PAP12; PDE225; TAC7", "gene_names_refseq": "PDE225; PIGMENT DEFECTIVE 225; PTAC7; TAC7; plastid transcriptionally active7", "protein_names_uniprotkb": "Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7; PEP-associated protein 12; Protein PIGMENT DEFECTIVE 225; pTAC7", "protein_names_refseq": "plastid transcriptionally active7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G24314)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "14593172;15911589;16326926;23082802;27862469;33391315;9405937", "class_list": "", "function": "Essential for chloroplast development, especially for thylakoid formation. Involved in plastid gene expression, probably by maintaining plastid-encoded RNA polymerase (PEP) activity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KFT3;Q3YIT6;Q570R0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000427 plastid-encoded plastid RNA polymerase complex;GO:0009507 chloroplast;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009658 chloroplast organization;GO:0009735 response to cytokinin;GO:0010027 thylakoid membrane organization;GO:0042793 plastid transcription", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8VZV9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W034-1", "uniprot_id": [ { "id": "RNP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W034", "type": "external" } ], "mass": 42353.0, "length": 411, "protein_name": "Heterogeneous nuclear ribonucleoprotein 1", "gene_name": "RNP1", "organism": "Arabidopsis", "refseq_name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "refseq_ac": [ { "id": "NP_001328758", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328758", "type": "external" } ], "gene_names_uniprotkb": "RNP1; FCAALL.156; dl3190w", "gene_names_refseq": "DL3190W; FCAALL.156", "protein_names_uniprotkb": "Heterogeneous nuclear ribonucleoprotein 1; hnRNP1", "protein_names_refseq": "RNA-binding (RRM/RBD/RNP motifs) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14300)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;10740297;11809873;14756317;25561503;27862469;28154133;9461215", "class_list": "", "function": "Involved in the packaging of pre-mRNA into hnRNP particles, transport of poly(A) mRNA from the nucleus to the cytoplasm and may modulate splice site selection., [UniProtKB]; Involved with pre-mRNA processing. Forms complexes (ribonucleosomes) with at least 20 other different hnRNP and heterogeneous nuclear RNA in the nucleus (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23288", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0051028 mRNA transport;GO:0010228 vegetative to reproductive phase transition of meristem;GO:1901000 regulation of response to salt stress", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8W034-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W117-1", "uniprot_id": [ { "id": "SMU1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W117", "type": "external" } ], "mass": 57724.0, "length": 511, "protein_name": "Suppressor of mec-8 and unc-52 protein homolog 1", "gene_name": "SMU1", "organism": "Arabidopsis", "refseq_name": "transducin family protein / WD-40 repeat family protein", "refseq_ac": [ { "id": "NP_177513", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177513", "type": "external" } ], "gene_names_uniprotkb": "SMU1; F25P22.14", "gene_names_refseq": "F25P22.14; F25P22_14; SMU1; SUPPRESSORS OF MEC-8 AND UNC-52 1", "protein_names_uniprotkb": "Suppressor of mec-8 and unc-52 protein homolog 1; AtSMU-1; RNA splicing protein SMU1; WD40 repeat-containing protein SMU1", "protein_names_refseq": "transducin family protein / WD-40 repeat family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G73720)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;19734266;22223895;27862469", "class_list": "", "function": "Auxiliary spliceosomal protein involved in splicing of specific pre-mRNAs that affect multiple aspects of development. Required for proper accumulation of SMU2., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C9T9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0071011 precatalytic spliceosome;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W117-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W1E3-1", "uniprot_id": [ { "id": "CDF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W1E3", "type": "external" } ], "mass": 33639.0, "length": 298, "protein_name": "Cyclic dof factor 1", "gene_name": "CDF1", "organism": "Arabidopsis", "refseq_name": "cycling DOF factor 1", "refseq_ac": [ { "id": "NP_201049", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201049", "type": "external" } ], "gene_names_uniprotkb": "CDF1; DOF5.5; K19B1.4; MMI9.24", "gene_names_refseq": "CDF1; K19B1.4; K19B1_4; cycling DOF factor 1", "protein_names_uniprotkb": "Cyclic dof factor 1; AtDOF5.5; Dof zinc finger protein DOF5.5", "protein_names_refseq": "cycling DOF factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G62430)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "12475498;14593172;16002617;17872410;19619493;22628657;27862469;9872454", "class_list": "", "function": "Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. A flanking TGT sequence contributes to the specificity of binding. Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression. The DNA-binding ability is not modulated by 'GIGANTEA' but the stability of CDF1 is controlled by the proteasome-dependent pathway. Ubiquitinated by the SCF(ADO3) E3 ubiquitin ligase complex. Binds to the FT promoter in the morning., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4ACT9;Q9FJJ9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009658 chloroplast organization;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8W1E3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W1S1-1", "uniprot_id": [ { "id": "DGDG2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W1S1", "type": "external" } ], "mass": 53907.0, "length": 473, "protein_name": "Digalactosyldiacylglycerol synthase 2, chloroplastic", "gene_name": "DGD2", "organism": "Arabidopsis", "refseq_name": "digalactosyl diacylglycerol deficient 2", "refseq_ac": [ { "id": "NP_001329549", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329549", "type": "external" } ], "gene_names_uniprotkb": "DGD2; F6N23.24", "gene_names_refseq": "DGD2; DIGALACTOSYLDIACYLGLYCEROL SYNTHASE; F6N23.24; F6N23_24; digalactosyl diacylglycerol deficient 2", "protein_names_uniprotkb": "Digalactosyldiacylglycerol synthase 2, chloroplastic; 2.4.1.241", "protein_names_refseq": "digalactosyl diacylglycerol deficient 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00550)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11696551;14593172;14600212;21156807;21506606;24905498;25561503;27862469;28011693", "class_list": "glycogene;glycosyltransferase", "function": "Involved in the synthesis of diacylglycerol galactolipids that are specifically found in thylakoid membranes. Specific for alpha-glycosidic linkages (PubMed:11696551, PubMed:14600212). During phosphate shortage, involved in the biosynthesis of digalactosyldiacylglycerol (DGDG) which rescues the limitation of phospholipids (Probable)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 15, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65264;Q56ZV5;Q8W1S0;W8PV82", "ec_number_list": [ { "id": "2.4.1.241", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.241", "type": "external" } ], "go_molecular_function": "GO:0008194 UDP-glycosyltransferase activity;GO:0035250 UDP-galactosyltransferase activity;GO:0046481 digalactosyldiacylglycerol synthase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0009247 glycolipid biosynthetic process;GO:0016036 cellular response to phosphate starvation;GO:0019375 galactolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8W1S1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W1W6-1", "uniprot_id": [ { "id": "MYB33_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W1W6", "type": "external" } ], "mass": 58395.0, "length": 520, "protein_name": "Transcription factor MYB33", "gene_name": "MYB33", "organism": "Arabidopsis", "refseq_name": "myb domain protein 33", "refseq_ac": [ { "id": "NP_001078537", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078537", "type": "external" } ], "gene_names_uniprotkb": "MYB33; K16F4.6", "gene_names_refseq": "ATMYB33; K16F4.6; K16F4_6; MYB33; myb domain protein 33", "protein_names_uniprotkb": "Transcription factor MYB33; AtMYB33; Myb-related protein 33", "protein_names_refseq": "myb domain protein 33", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06100)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11597504;11743113;11910074;14593172;15226253;15722475;17217461;17916625;18305205;20699403;22074104;24278028;27862469;9839469", "class_list": "", "function": "Transcriptional activator of alpha-amylase expression that binds to 5'-CAACTGTC-3' motif in target gene promoter (PubMed:11743113). Positive regulator of abscisic acid (ABA) responses leading to growth arrest during seed germination (PubMed:17217461). In vegetative tissues, inhibits growth by reducing cell proliferation. Promotes the expression of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. Together with MYB65 and MYB101, promotes the programmed cell death (PCD) the vacuolation of protein storage vacuoles (PSVs) in the aleurone layers during seed germination (PubMed:20699403). Binds to a GARE site (GA-response element) in the LEAFY promoter, essential for its gibberellic acid (GA)-mediated induction (PubMed:15226253). Together with MYB65, facilitates anther and tapetum development (PubMed:15722475)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A178UNH0;B2CUN6;Q9LHS6;Q9ZTE7", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0008285 negative regulation of cell population proliferation;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0045926 negative regulation of growth", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8W1W6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W1Y0-1", "uniprot_id": [ { "id": "SSC14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W1Y0", "type": "external" } ], "mass": 114059.0, "length": 1031, "protein_name": "Sister chromatid cohesion 1 protein 4", "gene_name": "SYN4", "organism": "Arabidopsis", "refseq_name": "sister chromatid cohesion 1 protein 4", "refseq_ac": [ { "id": "NP_197131", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197131", "type": "external" } ], "gene_names_uniprotkb": "SYN4; T21H19.190", "gene_names_refseq": "ARABIDOPSIS HOMOLOG OF RAD21 3; ATRAD21.3; SYN4; T21H19.190; T21H19_190; sister chromatid cohesion 1 protein 4", "protein_names_uniprotkb": "Sister chromatid cohesion 1 protein 4; AtRAD21-3; AtRAD21.3", "protein_names_refseq": "sister chromatid cohesion 1 protein 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16270)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130714;14593172;16488915;19533160;20466843;21768351;23572148;23660473;23776212;25561503;26091701;26187819;27862469;29167316;30833711", "class_list": "", "function": "Involved in sister chromatid and centromere cohesion during mitosis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q940G1;Q9LF01", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region;GO:0008278 cohesin complex", "go_biological_process": "GO:0007059 chromosome segregation;GO:0051301 cell division;GO:0006302 double-strand break repair;GO:0007062 sister chromatid cohesion;GO:1990414 replication-born double-strand break repair via sister chromatid exchange", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8W1Y0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W206-1", "uniprot_id": [ { "id": "CSN6A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W206", "type": "external" } ], "mass": 35659.0, "length": 317, "protein_name": "COP9 signalosome complex subunit 6a", "gene_name": "CSN6A", "organism": "Arabidopsis", "refseq_name": "COP9 signalosome subunit 6A", "refseq_ac": [ { "id": "NP_568839", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568839", "type": "external" } ], "gene_names_uniprotkb": "CSN6A; K24C1.10", "gene_names_refseq": "COP9 signalosome subunit 6A; CSN6A; MXK23.2; MXK23_2", "protein_names_uniprotkb": "COP9 signalosome complex subunit 6a; AtCSN6a; Signalosome subunit 6a", "protein_names_refseq": "COP9 signalosome subunit 6A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G56280)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11337587;11701877;11742986;12615944;14593172;17307927;18854373;19704582;27862469", "class_list": "", "function": "Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. It is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Essential for the structural integrity of the CSN holocomplex (PubMed:17307927)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84WB5;Q941I1;Q9FG76", "ec_number_list": [], "go_molecular_function": "GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process;GO:0030163 protein catabolic process;GO:0010387 COP9 signalosome assembly;GO:0000338 protein deneddylation;GO:0009585 red, far-red light phototransduction", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8W206-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W420-1", "uniprot_id": [ { "id": "ADO2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W420", "type": "external" } ], "mass": 66351.0, "length": 611, "protein_name": "Adagio protein 2", "gene_name": "ADO2", "organism": "Arabidopsis", "refseq_name": "LOV KELCH protein 2", "refseq_ac": [ { "id": "NP_565444", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565444", "type": "external" } ], "gene_names_uniprotkb": "ADO2; F19F24.11; FKL1; LKP2", "gene_names_refseq": "ADAGIO 2; ADO2; LKP2; LOV KELCH protein 2", "protein_names_uniprotkb": "Adagio protein 2; F-box only protein 2c; FBX2c; FKF1-like protein 1; Flavin-binding kelch repeat F-box protein 1-like protein 1; LOV kelch protein 2", "protein_names_refseq": "LOV KELCH protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G18915)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;11077244;11260718;11752379;14593172;15310821;15937324;16002617;17704763;21518052;27862469", "class_list": "", "function": "Component of an E3 ubiquitin ligase complex that plays a central role in blue light-dependent circadian cycles. Acts as a blue light photoreceptor, due to the presence of FMN, that mediates light-regulated protein degradation of critical clock components by targeting them to the proteasome complex. The SCF(ADO2) E3 ubiquitin ligase complex is involved in the regulation of circadian clock-dependent processes including the transition to flowering time, hypocotyl elongation, cotyledons and leaf movement rhythms. APRR1/TOC1 and APRR5 seem to be substrates of the SCF(ADO2) complex. ADO2 interacts with ADO3 and export it to cytoplasmic speckles, preventing the interaction of ADO3 with CDF1. Ubiquitination of ADO2 is not involved in this recruitment., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B5X4Z7;Q9C5S6", "ec_number_list": [], "go_molecular_function": "GO:0009881 photoreceptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0019005 SCF ubiquitin ligase complex;GO:0015030 Cajal body", "go_biological_process": "GO:0007623 circadian rhythm;GO:0016567 protein ubiquitination;GO:0042752 regulation of circadian rhythm;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0009637 response to blue light", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8W420-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W453-1", "uniprot_id": [ { "id": "DIRL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W453", "type": "external" } ], "mass": 10702.0, "length": 102, "protein_name": "Putative lipid-transfer protein DIR1", "gene_name": "DIR1", "organism": "Arabidopsis", "refseq_name": "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein", "refseq_ac": [ { "id": "NP_568699", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568699", "type": "external" } ], "gene_names_uniprotkb": "DIR1; MJE7", "gene_names_refseq": "DEFECTIVE IN INDUCED RESISTANCE 1; DIR1", "protein_names_uniprotkb": "Putative lipid-transfer protein DIR1; Protein DEFECTIVE IN INDUCED RESISTANCE 1", "protein_names_refseq": "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48485)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10718197;12353036;14593172;18552128;23602565;27078071;27862469", "class_list": "", "function": "Putative lipid transfer protein required for systemic acquired resistance (SAR) long distance signaling. May interact with a lipid-derived molecule to promote long distance signaling associated with SAR. Together with AZI1, required for glycerol-3-phosphate- (G3P) and azelaic acid- (AA) induced systemic acquired resistance (SAR). Component of plant systemic immunity involved in priming defenses in a AA-dependent manner, by modulating production and/or translocation of a mobile signal(s) during SAR. Is able to bind with high affinity monoacylated phospholipids, mainly lysophosphatidylcholines (PubMed:18552128)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LEU7", "ec_number_list": [], "go_molecular_function": "GO:0005504 fatty acid binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0009506 plasmodesma;GO:0048046 apoplast", "go_biological_process": "GO:0006869 lipid transport;GO:0009627 systemic acquired resistance;GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W453-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W468-1", "uniprot_id": [ { "id": "ARI8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W468", "type": "external" } ], "mass": 64754.0, "length": 567, "protein_name": "Probable E3 ubiquitin-protein ligase ARI8", "gene_name": "ARI8", "organism": "Arabidopsis", "refseq_name": "IBR domain-containing protein", "refseq_ac": [ { "id": "NP_176722", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176722", "type": "external" } ], "gene_names_uniprotkb": "ARI8; T8F5.21", "gene_names_refseq": "ARABIDOPSIS ARIADNE 8; ARI8; ARIADNE 8; ATARI8; T8F5.21; T8F5_21", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase ARI8; 2.3.2.31; ARIADNE-like protein ARI8; Protein ariadne homolog 8; RING-type E3 ubiquitin transferase ARI8", "protein_names_refseq": "IBR domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65430)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;12446796;12529512;12663546;14593172;15644464;27862469", "class_list": "", "function": "Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80814;Q84JP9;Q84VL9", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0031624 ubiquitin conjugating enzyme binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W468-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W491-1", "uniprot_id": [ { "id": "U73B3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W491", "type": "external" } ], "mass": 54591.0, "length": 481, "protein_name": "UDP-glycosyltransferase 73B3", "gene_name": "UGT73B3", "organism": "Arabidopsis", "refseq_name": "UDP-glucosyl transferase 73B3", "refseq_ac": [ { "id": "NP_567953", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567953", "type": "external" } ], "gene_names_uniprotkb": "UGT73B3; F28A23.120", "gene_names_refseq": "F28A23.2; UDP-glucosyl transferase 73B3; UGT73B3", "protein_names_uniprotkb": "UDP-glycosyltransferase 73B3; 2.4.1.-; 2.4.1.91; Flavonol 3-O-glucosyltransferase UGT73B3", "protein_names_refseq": "UDP-glucosyl transferase 73B3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34131)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11042215;11641410;14593172;15352060;16306146;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Possesses quercetin 3-O-glucosyltransferase activity in vitro. Also active in vitro on benzoates and benzoate derivatives. Involved in stress or defense responses., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.1.237", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.237", "type": "external" }, { "id": "2.4.1.91", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.91", "type": "external" }, { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0035251 UDP-glucosyltransferase activity;GO:0047893 flavonol 3-O-glucosyltransferase activity;GO:0080043 quercetin 3-O-glucosyltransferase activity;GO:0080044 quercetin 7-O-glucosyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0051707 response to other organism;GO:0006952 defense response;GO:0071456 cellular response to hypoxia;GO:0051555 flavonol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W491-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W493-1", "uniprot_id": [ { "id": "FNRL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W493", "type": "external" } ], "mass": 41168.0, "length": 369, "protein_name": "Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic", "gene_name": "LFNR2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LFNR2; PETH2; T20H2.20", "gene_names_refseq": "", "protein_names_uniprotkb": "Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic; 1.18.1.2; AtLFNR2; FNR-2; Leaf FNR 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20020)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10948265;11130712;14593172;17335513;18243102;20040542;20934402;25561503;26941088;27862469", "class_list": "", "function": "Plays a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A8MRF7;A8MRG5;Q9LNS9", "ec_number_list": [ { "id": "1.18.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.18.1.2", "type": "external" } ], "go_molecular_function": "GO:0009055 electron transfer activity;GO:0004324 ferredoxin-NADP+ reductase activity;GO:0008266 poly(U) RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0050832 defense response to fungus;GO:0022900 electron transport chain;GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8W493-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W496-1", "uniprot_id": [ { "id": "PTC52_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W496", "type": "external" } ], "mass": 63819.0, "length": 559, "protein_name": "Protochlorophyllide-dependent translocon component 52, chloroplastic", "gene_name": "PTC52", "organism": "Arabidopsis", "refseq_name": "ACD1-like protein", "refseq_ac": [ { "id": "NP_567725", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567725", "type": "external" } ], "gene_names_uniprotkb": "PTC52; ACD1-like; L73G19.30; TIC55-IV", "gene_names_refseq": "52 KDA; 55 KDA - IV; ACD1-LIKE; ACD1-like; L73G19.30; L73G19_30; PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT; PTC52; TIC55-IV; TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS", "protein_names_uniprotkb": "Protochlorophyllide-dependent translocon component 52, chloroplastic; 1.14.15.-; ACD1-like protein; Protein TIC 55-IV; Translocon at the inner envelope membrane of chloroplasts 55-IV", "protein_names_refseq": "ACD1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25650)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;12481072;14593172;18349143;19995737;22060019;26091701;27862469", "class_list": "", "function": "Part of a translocon most abundantly expressed in etiolated plants and involved in the protochlorophyllide-dependent import of the precursor NADPH:protochlorophyllide oxidoreductase A (pPORA)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q93WJ7;Q9SZZ3", "ec_number_list": [ { "id": "1.14.15.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.15.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051537 2 iron, 2 sulfur cluster binding;GO:0016491 oxidoreductase activity;GO:0010277 chlorophyllide a oxygenase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8W496-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4D0-1", "uniprot_id": [ { "id": "CPY71_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4D0", "type": "external" } ], "mass": 70984.0, "length": 631, "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP71", "gene_name": "CYP71", "organism": "Arabidopsis", "refseq_name": "cyclophilin71", "refseq_ac": [ { "id": "NP_190046", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190046", "type": "external" } ], "gene_names_uniprotkb": "CYP71; F14L2.150", "gene_names_refseq": "AtCYP71; CYP71; cyclophilin 71; cyclophilin71", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase CYP71; 5.2.1.8; AtCYP71; Cyclophilin of 71 kDa; Cyclophilin-71; PPIase CYP71", "protein_names_refseq": "cyclophilin71", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G44600)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;15047905;15051864;17704213;21596687;23111157;27862469;33098102", "class_list": "", "function": "PPIases accelerate the folding of proteins (Probable). It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (PubMed:33098102). Histone proline isomerase that increases the rate of cis-trans isomerization of the synthetic histone H3 peptides H3P30 (RKSAP30F-p-nitroanilide) and H3P30K27me3 (RKme3-SAP30F-p-nitroanilide) in the histone H3 N-terminal tail, in vitro (PubMed:33098102). Histone remodeling factor involved in chromatin-based gene silencing (PubMed:17704213). Reinforces H3K27 methylation (PubMed:17704213). Involved in fundamental processes of chromatin assembly and histone modification by mediating the targeting of FAS1 and LHP1 on the chromatin (PubMed:21596687). Required for the formation and development of leaves, for normal phyllotaxy and for the formation, maintenance and activity of root and shoot apical meristems (PubMed:17704213)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LXM7", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0003682 chromatin binding;GO:0042393 histone binding;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0045814 negative regulation of gene expression, epigenetic;GO:0031507 heterochromatin formation;GO:0009909 regulation of flower development;GO:0009933 meristem structural organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8W4D0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4E1-1", "uniprot_id": [ { "id": "RH47_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4E1", "type": "external" } ], "mass": 60718.0, "length": 551, "protein_name": "DEAD-box ATP-dependent RNA helicase 47, mitochondrial", "gene_name": "RH47", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001322468", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322468", "type": "external" } ], "gene_names_uniprotkb": "RH47; EMB1586; F13K23.1; ISE1; T12C24.30", "gene_names_refseq": "EMB1586; INCREASED SIZE EXCLUSION LIMIT 1; ISE1; embryo defective 1586", "protein_names_uniprotkb": "DEAD-box ATP-dependent RNA helicase 47, mitochondrial; 3.6.4.13; Protein EMBRYO DEFECTIVE 1586; Protein INCREASED SIZE EXCLUSION LIMIT 1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12770)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;11779812;11874921;14593172;17168887;19805190;20434343;20541498;22106293;24265739;27862469", "class_list": "", "function": "Essential protein required during embryogenesis. Required for mitochondrial metabolism. Necessary for normal plasmodesmata (PD) development and aperture regulation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLV2;Q9LN70;Q9LPX3", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0010497 plasmodesmata-mediated intercellular transport;GO:0009663 plasmodesma organization", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8W4E1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4E2-1", "uniprot_id": [ { "id": "VATB3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4E2", "type": "external" } ], "mass": 54312.0, "length": 487, "protein_name": "V-type proton ATPase subunit B3", "gene_name": "VHA-B3", "organism": "Arabidopsis", "refseq_name": "ATPase, V1 complex, subunit B protein", "refseq_ac": [ { "id": "NP_173451", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173451", "type": "external" } ], "gene_names_uniprotkb": "VHA-B3; F14O10.13", "gene_names_refseq": "AtVAB3; F14O10.13; F14O10_13; V-ATPase B subunit 3; VAB3; VHA-B3", "protein_names_uniprotkb": "V-type proton ATPase subunit B3; V-ATPase subunit B3; Vacuolar H(+)-ATPase subunit B isoform 3; Vacuolar proton pump subunit B3", "protein_names_refseq": "ATPase, V1 complex, subunit B protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20260)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11950611;14593172;25561503;27862469", "class_list": "", "function": "Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LN19", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005773 vacuole", "go_biological_process": "GO:0030835 negative regulation of actin filament depolymerization;GO:0051017 actin filament bundle assembly;GO:0051693 actin filament capping;GO:0046034 ATP metabolic process;GO:0007035 vacuolar acidification", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W4E2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4E7-1", "uniprot_id": [ { "id": "S40A3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4E7", "type": "external" } ], "mass": 64486.0, "length": 598, "protein_name": "Solute carrier family 40 member 3, chloroplastic", "gene_name": "IREG3", "organism": "Arabidopsis", "refseq_name": "iron-regulated protein 3", "refseq_ac": [ { "id": "NP_198034", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198034", "type": "external" } ], "gene_names_uniprotkb": "IREG3; F2P16.6; FPN3; MAR1; RTS3", "gene_names_refseq": "ATIREG3; F2P16.6; F2P16_6; IREG3; IRON REGULATED 3; MAR1; MULTIPLE ANTIBIOTIC RESISTANCE 1; RTS3; iron-regulated protein 3", "protein_names_uniprotkb": "Solute carrier family 40 member 3, chloroplastic; AtIREG3; Ferroportin-3; Iron-regulated transporter 3; Protein MULTIPLE ANTIBIOTIC RESISTANCE 1", "protein_names_refseq": "iron-regulated protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26820)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;19675150;20592808;27862469", "class_list": "", "function": "Probable plastid transporter that may play a role in iron chelation, storage or sequestration under limiting iron conditions. In presence of exogenous antibiotics, may allow opportunistic entry of multiple aminoglycoside antibiotics into the chloroplast., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O04629", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0005381 iron ion transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006879 intracellular iron ion homeostasis;GO:0006826 iron ion transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W4E7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4I6-1", "uniprot_id": [ { "id": "BPG2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4I6", "type": "external" } ], "mass": 73087.0, "length": 660, "protein_name": "GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic", "gene_name": "BPG2", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_191277", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191277", "type": "external" } ], "gene_names_uniprotkb": "BPG2; F28O9.30", "gene_names_refseq": "BPG2; BRASSINAZOLE(BRZ) INSENSITIVE PALE GREEN 2", "protein_names_uniprotkb": "GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic; Protein BRZ-INSENSITIVE-PALE GREEN 2", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57180)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;19889879;19919572;22526496;27862469", "class_list": "", "function": "Required for brassinosteroid- (BR) mediated post-transcriptional and translational regulation in the chloroplast, including accumulation of chloroplast rRNA (PubMed:19919572). Involved in chloroplast differentiation (PubMed:19919572, PubMed:22526496)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2M9", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005525 GTP binding;GO:0016787 hydrolase activity;GO:0019843 rRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0032502 developmental process;GO:0009651 response to salt stress;GO:0009416 response to light stimulus;GO:0009741 response to brassinosteroid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8W4I6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4J3-1", "uniprot_id": [ { "id": "QSOX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4J3", "type": "external" } ], "mass": 60087.0, "length": 528, "protein_name": "Sulfhydryl oxidase 1", "gene_name": "QSOX1", "organism": "Arabidopsis", "refseq_name": "quiescin-sulfhydryl oxidase 1", "refseq_ac": [ { "id": "NP_001321934", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321934", "type": "external" } ], "gene_names_uniprotkb": "QSOX1; QSO2; T15D22.7", "gene_names_refseq": "ATQSOX1; QSO2; QSOX1; T15D22.7; T15D22_7; quiescin-sulfhydryl oxidase 1", "protein_names_uniprotkb": "Sulfhydryl oxidase 1; 1.8.3.2; AtQSOX1; Quiescin-sulfhydryl oxidase 1", "protein_names_refseq": "quiescin-sulfhydryl oxidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15020)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;17568770;27862469;30833711", "class_list": "", "function": "Sulfhydryl oxidase involved in the regulation of cation homeostasis. Positively regulates shoot accumulation of K(+) and inhibits accumulation of toxic cations. Acts at the level of root K(+) efflux systems involved in xylem loading (root symplast-xylem interface)., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q3EDC3;Q9M9Q3", "ec_number_list": [ { "id": "1.8.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.3.2", "type": "external" } ], "go_molecular_function": "GO:0016971 flavin-dependent sulfhydryl oxidase activity;GO:0003756 protein disulfide isomerase activity;GO:0016972 thiol oxidase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005615 extracellular space;GO:0000137 Golgi cis cisterna", "go_biological_process": "GO:0043268 positive regulation of potassium ion transport;GO:0006457 protein folding;GO:0043157 response to cation stress", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8W4J3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4L5-1", "uniprot_id": [ { "id": "VAL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4L5", "type": "external" } ], "mass": 87002.0, "length": 790, "protein_name": "B3 domain-containing transcription repressor VAL1", "gene_name": "VAL1", "organism": "Arabidopsis", "refseq_name": "B3 domain-containing transcription repressor VAL1", "refseq_ac": [ { "id": "NP_850146", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850146", "type": "external" } ], "gene_names_uniprotkb": "VAL1; HSI2; T6B20.17", "gene_names_refseq": "HSI2; T6B20.17; T6B20_17; VAL1; VP1/ABI3-LIKE 1; high-level expression of sugar-inducible gene 2", "protein_names_uniprotkb": "B3 domain-containing transcription repressor VAL1; Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE 2; Protein VP1/ABI3-LIKE 1", "protein_names_refseq": "B3 domain-containing transcription repressor VAL1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30470)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;14593172;15894743;17158584;17267611;18986826;19962994;25561503;26187819;27862469", "class_list": "", "function": "Transcriptional repressor of gene expression involved in embryonic pathways, such as LEC1, ABI3, and FUS3. Repressor of the sugar-inducible genes involved in the seed maturation program in seedlings. Plays an essential role in regulating the transition from seed maturation to seedling growth. Functionally redundant with VAL2/HSL1., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04346", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009744 response to sucrose;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8W4L5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4M5-1", "uniprot_id": [ { "id": "PFPB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4M5", "type": "external" } ], "mass": 61459.0, "length": 566, "protein_name": "Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1", "gene_name": "PFP-BETA1", "organism": "Arabidopsis", "refseq_name": "Phosphofructokinase family protein", "refseq_ac": [ { "id": "NP_172664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172664", "type": "external" } ], "gene_names_uniprotkb": "PFP-BETA1; F12F1.13", "gene_names_refseq": "F12F1.13; F12F1_13", "protein_names_uniprotkb": "Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1; 2.7.1.90; 6-phosphofructokinase, pyrophosphate dependent 1; PFP 1; PPi-PFK 1; Pyrophosphate-dependent 6-phosphofructose-1-kinase 1", "protein_names_refseq": "Phosphofructokinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12000)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;14593172;15501181;18463617;19245862;19376835;19533038;21768351;23111157;23328941;23572148;23660473;23776212;25561503;26091701;27862469;28011693;30833711", "class_list": "", "function": "Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase. Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis., [UniProtKB, PubMed, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65379", "ec_number_list": [ { "id": "2.7.1.90", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.90", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0003872 6-phosphofructokinase activity;GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0009749 response to glucose;GO:0006002 fructose 6-phosphate metabolic process;GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8W4M5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4M7-1", "uniprot_id": [ { "id": "ERCC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4M7", "type": "external" } ], "mass": 86236.0, "length": 758, "protein_name": "General transcription and DNA repair factor IIH helicase subunit XPD", "gene_name": "XPD", "organism": "Arabidopsis", "refseq_name": "RAD3-like DNA-binding helicase protein", "refseq_ac": [ { "id": "NP_171818", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171818", "type": "external" } ], "gene_names_uniprotkb": "XPD; F15K9.20; UVH6", "gene_names_refseq": "ARABIDOPSIS THALIANA XERODERMA PIGMENTOSUM GROUP D; ATXPD; ULTRAVIOLET HYPERSENSITIVE 6; UVH6", "protein_names_uniprotkb": "General transcription and DNA repair factor IIH helicase subunit XPD; 5.6.2.3; AtUVH6; AtXPD; DNA 5'-3' helicase XPD; ERCC2 homolog; RAD3 homolog; TFIIH subunit XPD; UV hypersensitive protein 6; XPD homolog", "protein_names_refseq": "RAD3-like DNA-binding helicase protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03190)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;12857822;14593172;15645454;16623910;23111157;24265739;27862469;7498749;9414549", "class_list": "", "function": "ATP-dependent 5'-3' DNA helicase, component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to CDK-activating kinase (CAK), involved in transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The ATP-dependent helicase activity of XPD is required for DNA opening. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has been established, TFIIH is required for promoter opening and promoter escape. Phosphorylation of the C-terminal tail (CTD) of the largest subunit of RNA polymerase II by the kinase module CAK controls the initiation of transcription. XPD acts by forming a bridge between CAK and the core-TFIIH complex (By similarity). Essential during plant growth (PubMed:12857822). May negatively regulate a common response program mediated by UV damage and heat stress, that leads to tissue death and reduced chloroplast function (PubMed:9414549)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SE44;Q9ZVS1", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0003684 damaged DNA binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006281 DNA repair;GO:0009411 response to UV;GO:0006366 transcription by RNA polymerase II;GO:0009408 response to heat;GO:0006289 nucleotide-excision repair", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8W4M7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4P9-1", "uniprot_id": [ { "id": "TT9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4P9", "type": "external" } ], "mass": 94742.0, "length": 837, "protein_name": "Protein TRANSPARENT TESTA 9", "gene_name": "TT9", "organism": "Arabidopsis", "refseq_name": "CLEC16A-like protein", "refseq_ac": [ { "id": "NP_566837", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566837", "type": "external" } ], "gene_names_uniprotkb": "TT9; GFS9; MFJ20.13", "gene_names_refseq": "GFS9; TRANSPARENT TESTA 9; TT9; green fluorescent seed 9", "protein_names_uniprotkb": "Protein TRANSPARENT TESTA 9; Protein GREEN FLUORESCENT SEED 9", "protein_names_refseq": "CLEC16A-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G28430)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;14593172;19423640;23111157;25116949;27862469;8528278", "class_list": "", "function": "Involved in membrane trafficking and vacuole development through membrane fusion at the vacuole. Required for membrane trafficking machinery and accumulation of flavonoids in the seed coat., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z3C5;Q9LSJ0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0019898 extrinsic component of membrane", "go_biological_process": "GO:0007034 vacuolar transport;GO:0001708 cell fate specification;GO:0016197 endosomal transport;GO:0016192 vesicle-mediated transport;GO:0044090 positive regulation of vacuole organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W4P9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4Q4-1", "uniprot_id": [ { "id": "MRF3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4Q4", "type": "external" } ], "mass": 77436.0, "length": 702, "protein_name": "MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3", "gene_name": "MRF3", "organism": "Arabidopsis", "refseq_name": "MA3 domain-containing protein", "refseq_ac": [ { "id": "NP_001031708", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031708", "type": "external" } ], "gene_names_uniprotkb": "MRF3; ECIP1; F6I7.10; MAT5", "gene_names_refseq": "ECIP1; EIN2 C-terminus Interacting Protein 1; F6I7.10; F6I7_10", "protein_names_uniprotkb": "MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3; EIN2 C-terminus interacting protein 1; MA3 domain-containing protein 5", "protein_names_refseq": "MA3 domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24800)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;14593172;21631530;22223895;23328941;23820729;24041411;27862469;29084871;29167316", "class_list": "", "function": "Involved in target of rapamycin (TOR)-regulated translation control, especially under energy-deficient conditions (PubMed:29084871). Involved in the regulation of the ethylene-mediated signaling pathway (PubMed:21631530). Involved in salt stress responses (PubMed:21631530). Reduced cotyledons size and early flowering (PubMed:21631530)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178V3H6;Q56XH1;Q9SZX0", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0043022 ribosome binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0006417 regulation of translation;GO:0045892 negative regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0090549 response to carbon starvation;GO:0009646 response to absence of light", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8W4Q4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4S4-1", "uniprot_id": [ { "id": "VHAA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4S4", "type": "external" } ], "mass": 92833.0, "length": 821, "protein_name": "V-type proton ATPase subunit a3", "gene_name": "VHA-a3", "organism": "Arabidopsis", "refseq_name": "vacuolar proton ATPase A3", "refseq_ac": [ { "id": "NP_568051", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568051", "type": "external" } ], "gene_names_uniprotkb": "VHA-a3; F19H22.180", "gene_names_refseq": "F19H22.180; F19H22_180; VHA-A3; vacuolar proton ATPase A3", "protein_names_uniprotkb": "V-type proton ATPase subunit a3; V-ATPase 95 kDa isoform a3; V-ATPase subunit a3; V-type proton ATPase 95 kDa subunit a isoform 3; Vacuolar H(+)-ATPase subunit a isoform 3; Vacuolar proton pump subunit a3; Vacuolar proton translocating ATPase 95 kDa subunit a isoform 3", "protein_names_refseq": "vacuolar proton ATPase A3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39080)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;11950611;14593172;16461582;16581873;17151019;18441211;19376835;20133698;20374526;21768351;22223895;25561503;27862469", "class_list": "", "function": "Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. Involved in vacuolar nutrient storage (e.g. accumulation and storage of nitrate) and in tolerance to some toxic ions (e.g. zinc ions sequestration in vacuoles)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLI9;Q42216;Q56WQ9;Q9SVI5", "ec_number_list": [], "go_molecular_function": "GO:0051117 ATPase binding;GO:0046961 proton-transporting ATPase activity, rotational mechanism;GO:0140486 zinc ion sequestering activity;GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0005774 vacuolar membrane;GO:0005773 vacuole", "go_biological_process": "GO:0015986 proton motive force-driven ATP synthesis;GO:0007035 vacuolar acidification;GO:1902600 proton transmembrane transport;GO:2000012 regulation of auxin polar transport", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8W4S4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W585-1", "uniprot_id": [ { "id": "FTSH8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W585", "type": "external" } ], "mass": 73198.0, "length": 685, "protein_name": "ATP-dependent zinc metalloprotease FTSH 8, chloroplastic", "gene_name": "FTSH8", "organism": "Arabidopsis", "refseq_name": "FTSH protease 8", "refseq_ac": [ { "id": "NP_001321589", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321589", "type": "external" } ], "gene_names_uniprotkb": "FTSH8; F12K11.22; F12K11_24", "gene_names_refseq": "FTSH protease 8; FTSH8", "protein_names_uniprotkb": "ATP-dependent zinc metalloprotease FTSH 8, chloroplastic; 3.4.24.-; AtFTSH8", "protein_names_refseq": "FTSH protease 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06430)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;11299370;11717304;14593172;14630971;14996218;15266057;16126834;18431481;25561503;27862469;28011693", "class_list": "", "function": "Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q94AL5;Q9SHI8", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0016887 ATP hydrolysis activity;GO:0004176 ATP-dependent peptidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009579 thylakoid", "go_biological_process": "GO:0006508 proteolysis;GO:0010304 PSII associated light-harvesting complex II catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8W585-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W586-1", "uniprot_id": [ { "id": "QQT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W586", "type": "external" } ], "mass": 42551.0, "length": 379, "protein_name": "GPN-loop GTPase QQT2", "gene_name": "QQT2", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_193911", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193911", "type": "external" } ], "gene_names_uniprotkb": "QQT2; F17L22.260; T8O5.10; quatre-quart2", "gene_names_refseq": "F17L22.260; F17L22_260; QQT2; quatre-quart2", "protein_names_uniprotkb": "GPN-loop GTPase QQT2; 3.6.5.-; Protein QUATRE QUART 2", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21800)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;17419841;22223895;23328941;23572148;23776212;26091701;27862469", "class_list": "", "function": "Small GTPase that is essential for the correct formation of the tangential divisions in early embryos. Associates with microtubule during mitosis and may function in the positioning of the division plane. May participate in the patterning of the early embryo at the octant-dermatogen transition., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49703;Q8L9E7;Q9SVR7", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0005874 microtubule;GO:0009524 phragmoplast", "go_biological_process": "GO:0051301 cell division;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8W586-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W593-1", "uniprot_id": [ { "id": "LGUC_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W593", "type": "external" } ], "mass": 39167.0, "length": 350, "protein_name": "Probable lactoylglutathione lyase, chloroplastic", "gene_name": "F1N21.10", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F1N21.10", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable lactoylglutathione lyase, chloroplastic; 4.4.1.5; Glyoxalase I", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67280)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;11719511;14593172;27862469", "class_list": "", "function": "Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A8MRZ1;Q8LEY7;Q9FYG5", "ec_number_list": [ { "id": "4.4.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.5", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004462 lactoylglutathione lyase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009579 thylakoid", "go_biological_process": "GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione;GO:0009409 response to cold", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8W593-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W5R2-1", "uniprot_id": [ { "id": "SHGR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W5R2", "type": "external" } ], "mass": 106316.0, "length": 933, "protein_name": "Phospholipase SGR2", "gene_name": "SGR2", "organism": "Arabidopsis", "refseq_name": "shoot gravitropism 2 (SGR2)", "refseq_ac": [ { "id": "NP_174433", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174433", "type": "external" } ], "gene_names_uniprotkb": "SGR2; F27M3.29; T8E3.1", "gene_names_refseq": "SGR2; SHOOT GRAVITROPISM 2; T8E3.1; T8E3_1", "protein_names_uniprotkb": "Phospholipase SGR2; 3.1.1.-; Protein SHOOT GRAVITROPISM 2", "protein_names_refseq": "shoot gravitropism 2 (SGR2)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31480)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11826297;11826298;12024223;16344262;18463617;20466843;21645145;23111157;25561503;27862469;28011693;8819871", "class_list": "", "function": "Involved in vacuolar formation or function (e.g. formation of vacuolar membrane 'bulbs'). Required for amyloplast sedimentation in the endodermis during shoot gravitropism, which are thus acting as statoliths. Particularly important for the negative gravitropism leading to leaf movement observed in darkness., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6U4;Q9C861", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004620 phospholipase activity;GO:0008970 phospholipase A1 activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005773 vacuole;GO:0009506 plasmodesma;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0009590 detection of gravity;GO:0016042 lipid catabolic process;GO:0009630 gravitropism;GO:0009660 amyloplast organization;GO:0009959 negative gravitropism", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q8W5R2-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93V43-1", "uniprot_id": [ { "id": "TCP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93V43", "type": "external" } ], "mass": 40179.0, "length": 365, "protein_name": "Transcription factor TCP2", "gene_name": "TCP2", "organism": "Arabidopsis", "refseq_name": "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2", "refseq_ac": [ { "id": "NP_001078407", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078407", "type": "external" } ], "gene_names_uniprotkb": "TCP2; F28J12.50", "gene_names_refseq": "F28J12.50; F28J12_50; TCP2; TEOSINTE BRANCHED 1; cycloidea and PCF transcription factor 2", "protein_names_uniprotkb": "Transcription factor TCP2; Protein TEOSINTE-LIKE1, CYCLOIDEA, and PROLIFERATING CELL FACTOR 2", "protein_names_refseq": "TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18390)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10363373;10617198;12931144;14593172;17307924;17307931;25378179;25527103;26596765;27862469", "class_list": "", "function": "Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule development (PubMed:25378179). Promotes light-regulated transcription of CHS, CAB, HYH and HY5. Positively regulates photomorphogenesis (e.g. hypocotyl elongation inhibition and cotyledon opening in response to blue light) (PubMed:26596765)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49509;O81384;Q8LGF2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0009637 response to blue light;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q93V43-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93V56-1", "uniprot_id": [ { "id": "IPYR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93V56", "type": "external" } ], "mass": 24484.0, "length": 212, "protein_name": "Soluble inorganic pyrophosphatase 1", "gene_name": "PPA1", "organism": "Arabidopsis", "refseq_name": "pyrophosphorylase 1", "refseq_ac": [ { "id": "NP_001322481", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322481", "type": "external" } ], "gene_names_uniprotkb": "PPA1; T25K16.5", "gene_names_refseq": "AtPPa1; PPa1; T25K16.5; T25K16_5; pyrophosphorylase 1", "protein_names_uniprotkb": "Soluble inorganic pyrophosphatase 1; 3.6.1.1; PPase 1; Pyrophosphate phospho-hydrolase 1", "protein_names_refseq": "pyrophosphorylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01050)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130712;14593172;15135060;15610358;22438062;22566496;23172892;23328941;23572148;23660473;23776212;23820729;24601666;25561503;26091701;26187819;27862469;28011693;29167316", "class_list": "", "function": "Catalyzes the irreversible hydrolysis of pyrophosphate (PPi) to phosphate. The MgPPi(2-) complex binds to the enzyme only after a free Mg(2+) ion has bound (Ref.9). No activity with glycerol-3-phosphate, glucose-6-phosphate, p-nitrophenylphosphate, ADP, NADP(+), NAD(+),NADH, NADPH or phosphoribosyl pyrophosphate as substrates (Ref.9). Controls the equilibrium of gluconeogenic reactions in the heterotrophic growth phase of early seedling establishment. Determinates the rate of cytosolic glycolysis, providing carbon for seed storage lipid accumulation (PubMed:22566496)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9MAM9", "ec_number_list": [ { "id": "3.6.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.1", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0004427 inorganic diphosphate phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006796 phosphate-containing compound metabolic process;GO:0019915 lipid storage;GO:0005985 sucrose metabolic process;GO:0042546 cell wall biogenesis;GO:0010581 regulation of starch biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q93V56-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93V66-1", "uniprot_id": [ { "id": "FAX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93V66", "type": "external" } ], "mass": 24347.0, "length": 226, "protein_name": "Protein FATTY ACID EXPORT 1, chloroplastic", "gene_name": "FAX1", "organism": "Arabidopsis", "refseq_name": "Transmembrane proteins 14C", "refseq_ac": [ { "id": "NP_567046", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567046", "type": "external" } ], "gene_names_uniprotkb": "FAX1; F28O9.130", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein FATTY ACID EXPORT 1, chloroplastic; At-FAX1", "protein_names_refseq": "Transmembrane proteins 14C", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57280)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12766230;14593172;22706448;25646734;27862469", "class_list": "", "function": "Mediates the export of free fatty acid from the plastids. Potentially prefers palmitic acid (C16:0) over oleic acid (C18:1) and stearic acid (C18:0). Not involved in fatty acid activation. Required for biogenesis of the outer pollen cell wall, in particular for the assembly of exine and pollen coat and for the release of ketone wax components., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2L9", "ec_number_list": [], "go_molecular_function": "GO:0015245 fatty acid transmembrane transporter activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0055088 lipid homeostasis;GO:0015908 fatty acid transport;GO:1902001 fatty acid transmembrane transport;GO:0010208 pollen wall assembly;GO:0071668 plant-type cell wall assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q93V66-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93V99-1", "uniprot_id": [ { "id": "PDF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93V99", "type": "external" } ], "mass": 81530.0, "length": 743, "protein_name": "Homeobox-leucine zipper protein PROTODERMAL FACTOR 2", "gene_name": "PDF2", "organism": "Arabidopsis", "refseq_name": "protodermal factor 2", "refseq_ac": [ { "id": "NP_001329475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329475", "type": "external" } ], "gene_names_uniprotkb": "PDF2; T1J1.3", "gene_names_refseq": "PDF2; T1J1.3; T1J1_3; protodermal factor 2", "protein_names_uniprotkb": "Homeobox-leucine zipper protein PROTODERMAL FACTOR 2; HD-ZIP protein PDF2; Homeodomain transcription factor PDF2", "protein_names_refseq": "protodermal factor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04890)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;10809443;12505995;14593172;16778018;23572148;23590515;23660473;24989044;25561503;25564655;27862469", "class_list": "", "function": "Probable transcription factor that binds to the L1 box DNA sequence 5'-TAAATG[CT]A-3'. Plays a role in maintaining the identity of L1 cells, possibly by interacting with their L1 box or other target-gene promoters; binds to the LIP1 gene promoter and stimulates its expression upon imbibition (PubMed:24989044). Acts as a positive regulator of gibberellins (GAs)-regulated epidermal gene expression (e.g. LIP1, LIP2, LTP1, FDH and PDF1) (PubMed:24989044). Functionally redundant to ATML1 (PubMed:24989044). Involved, together with HDG proteins (e.g. HDG1, HDG2, HDG5 and HDG12), in the regulation of flower organs development by promoting the expression of APETALA 3 (AP3) in the epidermis and internal cell layers of developing flowers (PubMed:23590515). Seems to promote cell differentiation (PubMed:25564655)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M0Z0;Q9ZPH7", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008289 lipid binding;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0009845 seed germination;GO:0010029 regulation of seed germination;GO:0048497 maintenance of floral organ identity", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q93V99-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VH1-1", "uniprot_id": [ { "id": "YIP4B_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VH1", "type": "external" } ], "mass": 30220.0, "length": 280, "protein_name": "Protein YIP4b", "gene_name": "YIP4B", "organism": "Arabidopsis", "refseq_name": "Integral membrane Yip1 family protein", "refseq_ac": [ { "id": "NP_001320089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320089", "type": "external" } ], "gene_names_uniprotkb": "YIP4B; F9N11.110; F9N11_110; YIP2; YIP4b", "gene_names_refseq": "F9N11.110; F9N11_110; YIP4b; YPT/RAB GTPase Interacting Protein 4b", "protein_names_uniprotkb": "Protein YIP4b; YIP4b; YPT/RAB GTPase-interacting protein 4b", "protein_names_refseq": "Integral membrane Yip1 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30260)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;23832588;27862469;30770391", "class_list": "", "function": "Together with YIP4A, involved in the regulation of cell elongation during root and hypocotyl growth (PubMed:23832588). YIP4A and YIP4B are central trafficking components in Rho-of-plant (ROPs, e.g. ARAC4/ROP2, ARAC5/ROP4 and ARAC3/ROP6) small GTPases-dependent root hair formation, thus contributing to activation and plasma membrane accumulation of ROPs during hair initiation (PubMed:30770391). The ECH/YIP4 complex is involved in the modulation of the trans-Golgi network (TGN)-mediated trafficking of some proteins and cell wall components (e.g. pectin and hemicellulose) to the cell wall in dark-grown hypocotyls and in secretory cells of the seed coat (PubMed:23832588)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178V3Z0", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0032588 trans-Golgi network membrane", "go_biological_process": "GO:0051223 regulation of protein transport;GO:0015031 protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0009826 unidimensional cell growth;GO:0015774 polysaccharide transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q93VH1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VK0-1", "uniprot_id": [ { "id": "PPCK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VK0", "type": "external" } ], "mass": 31199.0, "length": 278, "protein_name": "Phosphoenolpyruvate carboxylase kinase 2", "gene_name": "PPCK2", "organism": "Arabidopsis", "refseq_name": "phosphoenolpyruvate carboxylase kinase 2", "refseq_ac": [ { "id": "NP_566229", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566229", "type": "external" } ], "gene_names_uniprotkb": "PPCK2; T27C4.19", "gene_names_refseq": "ATPPCK2; PEPCK2; PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2; PPCK2; T27C4.19; T27C4_19; phosphoenolpyruvate carboxylase kinase 2", "protein_names_uniprotkb": "Phosphoenolpyruvate carboxylase kinase 2; 2.7.11.1; AtPPCK2", "protein_names_refseq": "phosphoenolpyruvate carboxylase kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G04530)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;18771573;19228119;27862469", "class_list": "", "function": "Calcium-independent kinase involved in light-dependent phosphoenolpyruvate carboxylase phosphorylation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M834", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0035556 intracellular signal transduction;GO:0009416 response to light stimulus;GO:0046898 response to cycloheximide;GO:0016036 cellular response to phosphate starvation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q93VK0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VK5-1", "uniprot_id": [ { "id": "LUT5_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VK5", "type": "external" } ], "mass": 66846.0, "length": 595, "protein_name": "Protein LUTEIN DEFICIENT 5, chloroplastic", "gene_name": "CYP97A3", "organism": "Arabidopsis", "refseq_name": "cytochrome P450, family 97, subfamily A, polypeptide 3", "refseq_ac": [ { "id": "NP_564384", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564384", "type": "external" } ], "gene_names_uniprotkb": "CYP97A3; F5M6.19; LUT5", "gene_names_refseq": "''cytochrome P450; CYP97A3; F5M6.19; F5M6_19; LUT5; LUTEIN DEFICIENT 5; cytochrome P450; family 97; polypeptide 3''; polypeptide 3; subfamily A", "protein_names_uniprotkb": "Protein LUTEIN DEFICIENT 5, chloroplastic; 1.14.-.-; Cytochrome P450 97A3", "protein_names_refseq": "cytochrome P450, family 97, subfamily A, polypeptide 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31800)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;16492736;16890225;19147649;25561503;27862469;32513704", "class_list": "", "function": "Heme-containing cytochrome P450 involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylation of alpha- and beta-carotene. Also has a low activity toward the epsilon-rings of alpha-carotene. The beta-ring of alpha-carotene is the preferred substrate in planta., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6S0", "ec_number_list": [], "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0010291 beta-carotene 3-hydroxylase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0016117 carotenoid biosynthetic process;GO:0016123 xanthophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q93VK5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VP3-1", "uniprot_id": [ { "id": "IF5A2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VP3", "type": "external" } ], "mass": 17140.0, "length": 159, "protein_name": "Eukaryotic translation initiation factor 5A-2", "gene_name": "ELF5A-2", "organism": "Arabidopsis", "refseq_name": "Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein", "refseq_ac": [ { "id": "NP_001077597", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077597", "type": "external" } ], "gene_names_uniprotkb": "ELF5A-2; FBR12; T24P13.1", "gene_names_refseq": "ATELF5A-2; ELF5A-2; EUKARYOTIC ELONGATION FACTOR 5A-2; FBR12; FUMONISIN B1-RESISTANT12; T24P13.1; T24P13_1", "protein_names_uniprotkb": "Eukaryotic translation initiation factor 5A-2; AtELF5A-2; Protein FUMONISIN B1-RESISTANT 12; eIF-5A-2", "protein_names_refseq": "Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G26630)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130712;14593172;17513484;18633122;19376835;19676114;20018887;21768351;22329444;22438062;23172892;23328941;23572148;24043427;24163315;25561503;26091701;27862469;28154133;30833711", "class_list": "", "function": "Translation factor that promotes translation elongation and termination, particularly upon ribosome stalling at specific amino acid sequence contexts (By similarity). Binds between the exit (E) and peptidyl (P) site of the ribosome and promotes rescue of stalled ribosome: specifically required for efficient translation of polyproline-containing peptides as well as other motifs that stall the ribosome (By similarity). Acts as a ribosome quality control (RQC) cofactor by joining the RQC complex to facilitate peptidyl transfer during CAT tailing step (By similarity). Regulates cytokinin-mediated root protoxylem specification and represses secifically the expression of AHP6 (PubMed:24163315). Regulates the induction of programmed cell death caused by infection with virulent pathogen (PubMed:17513484, PubMed:18633122)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 2, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HPA2;Q547G3;Q9LQY9", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003746 translation elongation factor activity;GO:0043022 ribosome binding;GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0009617 response to bacterium;GO:0009611 response to wounding;GO:0006413 translational initiation;GO:0042742 defense response to bacterium;GO:0006414 translational elongation", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q93VP3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VQ0-1", "uniprot_id": [ { "id": "VCL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VQ0", "type": "external" } ], "mass": 96632.0, "length": 858, "protein_name": "Protein VACUOLELESS1", "gene_name": "VCL1", "organism": "Arabidopsis", "refseq_name": "vacuoleless1 (VCL1)", "refseq_ac": [ { "id": "NP_001078020", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078020", "type": "external" } ], "gene_names_uniprotkb": "VCL1; T8P21.7", "gene_names_refseq": "EMB258; MANGLED; MAN; T8P21.7; T8P21_7; VACUOLELESS 1; VCL1", "protein_names_uniprotkb": "Protein VACUOLELESS1; Vacuolar protein sorting-associated protein 16 homolog", "protein_names_refseq": "vacuoleless1 (VCL1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38020)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11702788;12589039;14593172;14988481;19423640;25561503;27862469;29463724", "class_list": "", "function": "Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles. Important for the function of both male and female gametophytes, but is not essential for the germination and development of pollen., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFU5;F4IRY5", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0030897 HOPS complex;GO:0005768 endosome;GO:0005783 endoplasmic reticulum;GO:0005771 multivesicular body;GO:0032991 protein-containing complex", "go_biological_process": "GO:0042144 vacuole fusion, non-autophagic;GO:0006886 intracellular protein transport;GO:0016197 endosomal transport;GO:0016192 vesicle-mediated transport;GO:0007033 vacuole organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q93VQ0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VR3-1", "uniprot_id": [ { "id": "GME_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VR3", "type": "external" } ], "mass": 42758.0, "length": 377, "protein_name": "GDP-mannose 3,5-epimerase", "gene_name": "F7P1.20", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F7P1.20", "gene_names_refseq": "", "protein_names_uniprotkb": "GDP-mannose 3,5-epimerase; 5.1.3.18; GDP-Man 3,5-epimerase", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G28840)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130714;11752432;12954627;14593172;16366586;19376835;21768351;22223895;23111157;23172892;23572148;23660473;25561503;27862469;28011693;9620799", "class_list": "", "function": "Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. Able to catalyze 2 distinct epimerization reactions and can release both GDP-L-galactose and GDP-L-gulose from GDP-mannose., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "5.1.3.18", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.3.18", "type": "external" } ], "go_molecular_function": "GO:0016854 racemase and epimerase activity;GO:0047918 GDP-mannose 3,5-epimerase activity;GO:0051287 NAD binding", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0010494 cytoplasmic stress granule;GO:0009536 plastid", "go_biological_process": "GO:0019853 L-ascorbic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q93VR3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93W20-1", "uniprot_id": [ { "id": "NIFU2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93W20", "type": "external" } ], "mass": 25620.0, "length": 235, "protein_name": "NifU-like protein 2, chloroplastic", "gene_name": "NIFU2", "organism": "Arabidopsis", "refseq_name": "NIFU-like protein 2", "refseq_ac": [ { "id": "NP_001078739", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078739", "type": "external" } ], "gene_names_uniprotkb": "NIFU2; CNFU2; K9P8.16; NFU2", "gene_names_refseq": "ATCNFU2; CHLOROPLAST-LOCALIZED NIFU-LIKE PROTEIN 2; K9P8.16; NFU2; NIFU-like protein 2", "protein_names_uniprotkb": "NifU-like protein 2, chloroplastic; AtCNfu2; AtCnfU-V", "protein_names_refseq": "NIFU-like protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49940)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10718197;11910074;12553879;14593172;15031412;15361144;18585737;19423640;23572148;27862469", "class_list": "", "function": "Molecular scaffold for [Fe-S] cluster assembly of chloroplastic iron-sulfur proteins. Required for biogenesis of ferredoxin, a major photosynthetic electron carrier containing [2Fe-2S] cluster. Required for the assembly of photosystem I complex., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MS35;Q9LTX6", "ec_number_list": [], "go_molecular_function": "GO:0005506 iron ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0005198 structural molecule activity;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0051604 protein maturation;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q93W20-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93W54-1", "uniprot_id": [ { "id": "ICMTB_ARATH", "url": "https://www.uniprot.org/uniprot/Q93W54", "type": "external" } ], "mass": 22766.0, "length": 197, "protein_name": "Protein-S-isoprenylcysteine O-methyltransferase B", "gene_name": "ICMTB", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ICMTB; F8L15.70; STE14B", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein-S-isoprenylcysteine O-methyltransferase B; 2.1.1.100; AtICMTB; AtSTE14B; Isoprenylcysteine carboxylmethyltransferase B; Prenylated protein carboxyl methyltransferase B; Prenylcysteine carboxyl methyltransferase 14 B", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08335)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;12472689;14593172;18641086;18957507;27862469", "class_list": "", "function": "Catalyzes the post-translational methylation of isoprenylated C-terminal cysteine residues, resulting in the modulation of the function of prenylated proteins. Involved in negative regulation of abscisic acid signaling. Carboxyl methylation is a reversible and potentially regulated step in the post-translational modification of prenylated proteins., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FTA1", "ec_number_list": [ { "id": "2.1.1.100", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.100", "type": "external" } ], "go_molecular_function": "GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0032259 methylation;GO:0009788 negative regulation of abscisic acid-activated signaling pathway;GO:0009908 flower development;GO:0048367 shoot system development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q93W54-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93W95-1", "uniprot_id": [ { "id": "PMTD_ARATH", "url": "https://www.uniprot.org/uniprot/Q93W95", "type": "external" } ], "mass": 67555.0, "length": 600, "protein_name": "Probable pectin methyltransferase QUA3", "gene_name": "QUA3", "organism": "Arabidopsis", "refseq_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "refseq_ac": [ { "id": "NP_001328335", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328335", "type": "external" } ], "gene_names_uniprotkb": "QUA3; F15P23.2; PMT13", "gene_names_refseq": "F15P23.2; F15P23_2; QUA3; QUASIMODO 3", "protein_names_uniprotkb": "Probable pectin methyltransferase QUA3; 2.1.1.-; Protein QUASIMODO 3", "protein_names_refseq": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00740)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;17461780;21725030;23820729;25249442;27862469", "class_list": "", "function": "S-adenosyl-L-methionine (SAM)-dependent methyltransferase (MTase) which mediates the methylesterification of the pectin homogalacturonan (HG) and thus regulates cell wall biosynthesis, at least in suspension-cultured cells., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A097PKM4;Q9ZPI0", "ec_number_list": [], "go_molecular_function": "GO:0008757 S-adenosylmethionine-dependent methyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005768 endosome", "go_biological_process": "GO:0032259 methylation;GO:0042546 cell wall biogenesis;GO:0045489 pectin biosynthetic process;GO:0052546 cell wall pectin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93W95-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WC9-1", "uniprot_id": [ { "id": "IPT3_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WC9", "type": "external" } ], "mass": 37915.0, "length": 336, "protein_name": "Adenylate isopentenyltransferase 3, chloroplastic", "gene_name": "IPT3", "organism": "Arabidopsis", "refseq_name": "isopentenyltransferase 3", "refseq_ac": [ { "id": "NP_567138", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567138", "type": "external" } ], "gene_names_uniprotkb": "IPT3; T20O10.210", "gene_names_refseq": "ATIPT3; IPT3; isopentenyltransferase 3", "protein_names_uniprotkb": "Adenylate isopentenyltransferase 3, chloroplastic; 2.5.1.112; Adenylate dimethylallyltransferase 3; AtIPT3; Cytokinin synthase 3", "protein_names_refseq": "isopentenyltransferase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63110)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;11313355;11479373;14593172;14675438;14726522;15356331;15998742;17062755;18184738;19074290;27862469", "class_list": "", "function": "Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP and ADP., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LYB1", "ec_number_list": [ { "id": "2.5.1.112", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.112", "type": "external" }, { "id": "2.5.1.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.27", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0052381 tRNA dimethylallyltransferase activity;GO:0009824 AMP dimethylallyltransferase activity;GO:0052622 ATP/ADP dimethylallyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0031965 nuclear membrane;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006400 tRNA modification;GO:0009691 cytokinin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q93WC9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WL3-1", "uniprot_id": [ { "id": "CLPT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WL3", "type": "external" } ], "mass": 26050.0, "length": 238, "protein_name": "ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic", "gene_name": "CLPT1", "organism": "Arabidopsis", "refseq_name": "Double Clp-N motif protein", "refseq_ac": [ { "id": "NP_567718", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567718", "type": "external" } ], "gene_names_uniprotkb": "CLPT1; CLPS1; T30C3.40", "gene_names_refseq": "T30C3.40; T30C3_40", "protein_names_uniprotkb": "ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic; nClpC-like protein", "protein_names_refseq": "Double Clp-N motif protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25370)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;11278690;14593120;14593172;16980539;21266658;22085372;23898032;25149061;25921872;27862469", "class_list": "", "function": "Accessory protein regulating the assembly of the plastidial Clp protease system (PubMed:21266658, PubMed:25921872). CLPT1 first binds to the heptameric P-ring containing the CLP3-6 subunits followed by CLPT2, and only then does the P-ring combine with the R-ring composed of the clpP1 and CLPR1-4 subunits (PubMed:21266658). Once the core complex is fully assembled, it then associates to the CLPC chaperone partner to form the functional protease (PubMed:21266658). CLPT1 and CLPT2 are partially redundant (PubMed:25921872)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STK0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009532 plastid stroma;GO:0009570 chloroplast stroma;GO:0009579 thylakoid", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q93WL3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WT0-1", "uniprot_id": [ { "id": "WRK31_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WT0", "type": "external" } ], "mass": 58541.0, "length": 538, "protein_name": "Probable WRKY transcription factor 31", "gene_name": "WRKY31", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 31", "refseq_ac": [ { "id": "NP_001328880", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328880", "type": "external" } ], "gene_names_uniprotkb": "WRKY31; F1N20.170", "gene_names_refseq": "ATWRKY31; F1N20.170; F1N20_170; WRKY DNA-binding protein 31; WRKY31", "protein_names_uniprotkb": "Probable WRKY transcription factor 31; WRKY DNA-binding protein 31", "protein_names_refseq": "WRKY DNA-binding protein 31", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22070)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;23328941;27862469", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65455", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q93WT0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WU8-1", "uniprot_id": [ { "id": "WRK54_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WU8", "type": "external" } ], "mass": 38645.0, "length": 346, "protein_name": "Probable WRKY transcription factor 54", "gene_name": "WRKY54", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 54", "refseq_ac": [ { "id": "NP_181607", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181607", "type": "external" } ], "gene_names_uniprotkb": "WRKY54; T7D17.7", "gene_names_refseq": "ATWRKY54; T7D17.7; T7D17_7; WRKY DNA-BINDING PROTEIN 54; WRKY DNA-binding protein 54; WRKY54", "protein_names_uniprotkb": "Probable WRKY transcription factor 54; WRKY DNA-binding protein 54", "protein_names_refseq": "WRKY DNA-binding protein 54", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40750)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;22268143;22316300;23815736;27862469;28576847;28837631", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Together with WRKY70, negative regulator of developmental senescence, probably via the regulation of several senescence-associated markers genes (PubMed:22268143). Positive regulator of EDS1-dependent defense against E.amylovora (PubMed:22316300). In collaboration with WRKY70, prevents stomatal closure and, consequently, osmotic stress tolerance (PubMed:23815736). Together with WRKY46 and WRKY70, promotes brassinosteroid (BR)-regulated plant growth but prevent drought response by modulating gene expression (PubMed:28576847). Negative regulator of SA biosynthesis (PubMed:28837631). Prevents defense response to the necrotrophic pathogens P.carotovorum and B.cinerea, but promotes defense against biotrophic/hemibiotrophic pathogens P.syringae pv. tomato (Pst) DC3000, probably by regulating negatively the jasmonic acid (JA)/ethylene (ET) and positively the salicylic acid (SA) signaling pathways (PubMed:28837631)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006970 response to osmotic stress;GO:0000302 response to reactive oxygen species;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93WU8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WX6-1", "uniprot_id": [ { "id": "CNIF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WX6", "type": "external" } ], "mass": 50485.0, "length": 463, "protein_name": "Cysteine desulfurase 1, chloroplastic", "gene_name": "NFS2", "organism": "Arabidopsis", "refseq_name": "chloroplastic NIFS-like cysteine desulfurase", "refseq_ac": [ { "id": "NP_172325", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172325", "type": "external" } ], "gene_names_uniprotkb": "NFS2; CpNIFS1; CpNIFS; T27G7.17", "gene_names_refseq": "ATCPNIFS; ATNFS2; ATSUFS; CPNIFS; CYSTEINE DESULFURASE; SUFS; T27G7.17; T27G7_17; chloroplastic NIFS-like cysteine desulfurase", "protein_names_uniprotkb": "Cysteine desulfurase 1, chloroplastic; 2.8.1.7; 4.4.1.16; CpNifS1; NIFS-like protein 1; Plastid sufS-like protein; Protein AtCpNifS; Selenocysteine lyase", "protein_names_refseq": "chloroplastic NIFS-like cysteine desulfurase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08490)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;12033984;12427997;14593172;15480755;16244144;16437155;16455656;17372218;18978034;22511606;27862469", "class_list": "", "function": "Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine (PubMed:12033984, PubMed:16455656). Supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters (PubMed:15480755, PubMed:17372218). Required for the maturation of all plastidic Fe-S proteins and, thus, essential for plant growth (PubMed:17372218)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJE3", "ec_number_list": [ { "id": "2.8.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.1.7", "type": "external" }, { "id": "4.4.1.16", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.16", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0009000 selenocysteine lyase activity;GO:0031071 cysteine desulfurase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0010269 response to selenium ion;GO:0006790 sulfur compound metabolic process;GO:0018283 iron incorporation into metallo-sulfur cluster;GO:0006534 cysteine metabolic process;GO:0001887 selenium compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q93WX6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93XW5-1", "uniprot_id": [ { "id": "NSP5_ARATH", "url": "https://www.uniprot.org/uniprot/Q93XW5", "type": "external" } ], "mass": 35853.0, "length": 326, "protein_name": "Thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP5", "gene_name": "NSP5", "organism": "Arabidopsis", "refseq_name": "nitrile specifier protein 5", "refseq_ac": [ { "id": "NP_568692", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568692", "type": "external" } ], "gene_names_uniprotkb": "NSP5; MIF21.7; NSP1", "gene_names_refseq": "AtNSP5; MIF21.7; MIF21_7; NSP5; nitrile specifier protein 5", "protein_names_uniprotkb": "Thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP5; 4.8.1.5; AtNSP1; AtNSP5; Nitrile-specifier protein 1; Nitrile-specifier protein 5", "protein_names_refseq": "nitrile specifier protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48180)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10718197;14593172;18987211;19224919;22954730;23111157;27862469;27990154", "class_list": "", "function": "Specifier protein that contributes to constitutive and herbivore-induced simple nitrile formation (PubMed:27990154). Promotes simple nitriles, but not epithionitrile or thiocyanate formation (PubMed:18987211). Converts allylglucosinolate (allyl-GSL), 2-propenylglucosinolate (sinigrin), indol-3-ylmethylglucosinolate (glucobrassicin), benzylisothiocyanate and benzylglucosinolate (glucotropaeolin) to their corresponding simple nitriles in the presence of myrosinase (PubMed:18987211, PubMed:19224919, PubMed:22954730). Catalyzes mainly the conversion of benzylisothiocyanate when benzylglucosinolate is used as the initial substrate of myrosinase (PubMed:19224919, PubMed:22954730)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LDQ6;Q9LUB5", "ec_number_list": [ { "id": "4.8.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:4.8.1.5", "type": "external" }, { "id": "4.8.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:4.8.1.6", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030234 enzyme regulator activity;GO:0016829 lyase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0019762 glucosinolate catabolic process;GO:0080028 nitrile biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q93XW5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Y07-1", "uniprot_id": [ { "id": "SFR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Y07", "type": "external" } ], "mass": 70779.0, "length": 622, "protein_name": "Galactolipid galactosyltransferase SFR2, chloroplastic", "gene_name": "SFR2", "organism": "Arabidopsis", "refseq_name": "Glycosyl hydrolase superfamily protein", "refseq_ac": [ { "id": "NP_001118591", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118591", "type": "external" } ], "gene_names_uniprotkb": "SFR2; F5E6.16", "gene_names_refseq": "ATSFR2; F5E6.16; F5E6_16; SENSITIVE TO FREEZING 2; SFR2", "protein_names_uniprotkb": "Galactolipid galactosyltransferase SFR2, chloroplastic; 2.4.1.184; AtSFR2; GGGT; Galactolipid:galactolipid galactosyltransferase; Protein SENSITIVE TO FREEZING 2", "protein_names_refseq": "Glycosyl hydrolase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06510)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10954083;11130713;14593172;14600212;15258268;15590685;15604686;18466306;20798281;25100720;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Glycosyl hydrolase family protein acting primarily as a highly specific galactosyltransferase (PubMed:25100720). Synthesizes digalactosyldiacylglycerol from monogalactosyldiacylglycerol in the absence of UDP-galactose in vitro (PubMed:14600212). Hydrolyzes o- and p-nitrophenyl beta-D-glucoside in vitro (PubMed:15258268). Plays a role in freezing tolerance (PubMed:15258268, PubMed:18466306, PubMed:20798281). May play a role in chloroplast protection (PubMed:18466306)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAN2;Q8LGU4;Q8LGU5;Q8W578;Q9C8Z2;Q9SDL5", "ec_number_list": [ { "id": "2.4.1.184", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.184", "type": "external" } ], "go_molecular_function": "GO:0008422 beta-glucosidase activity;GO:0008378 galactosyltransferase activity;GO:0016757 glycosyltransferase activity;GO:0080079 cellobiose glucosidase activity;GO:0046480 galactolipid galactosyltransferase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0009409 response to cold;GO:0005975 carbohydrate metabolic process;GO:0050826 response to freezing", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q93Y07-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Y08-1", "uniprot_id": [ { "id": "AB1K8_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Y08", "type": "external" } ], "mass": 86023.0, "length": 761, "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic", "gene_name": "ABC1K8", "organism": "Arabidopsis", "refseq_name": "ABC2 homolog 13", "refseq_ac": [ { "id": "NP_201299", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201299", "type": "external" } ], "gene_names_uniprotkb": "ABC1K8; ATH13; MXK3.17; OSA1", "gene_names_refseq": "A. THALIANA OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1; ABC2 homolog 13; ARABIDOPSIS THALIANA ABC2 HOMOLOG 13; ATATH13; ATH13; ATOSA1; MXK3.17; MXK3_17; OSA1; OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1", "protein_names_uniprotkb": "Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic; 2.7.11.1; ABC1-LIKE KINASE 8; ABC2 homolog protein 13; AtATH13; AtOSA1; Oxidative stress-related ABC1-like protein 1, chloroplastic", "protein_names_refseq": "ABC2 homolog 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64940)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10718197;11346655;14593172;18390807;22060019;22694836;24117441;25809944;27862469", "class_list": "", "function": "Involved in resistance to oxidative stress (e.g. hydrogen peroxide H(2)O(2)), high light and heavy metals (e.g. cadmium ions Cd(2+)) (PubMed:18390807, PubMed:24117441). Influences responses to reactive oxygen species (ROS) production. Together with SIA1, regulates iron distribution within the chloroplast and mediates the oxidative stress response (PubMed:24117441). Together with ABC1K7, influences chloroplast lipid synthesis/accumulation and modulates chloroplast membrane composition in response to stress (PubMed:25809944)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLU3;Q9ASU3;Q9LV84", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0042542 response to hydrogen peroxide;GO:0046686 response to cadmium ion;GO:0007623 circadian rhythm;GO:0034599 cellular response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q93Y08-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YN0-1", "uniprot_id": [ { "id": "SCOI2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YN0", "type": "external" } ], "mass": 20843.0, "length": 187, "protein_name": "Protein disulfide-isomerase SCO2", "gene_name": "SCO2", "organism": "Arabidopsis", "refseq_name": "protein disulfide isomerase", "refseq_ac": [ { "id": "NP_566627", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566627", "type": "external" } ], "gene_names_uniprotkb": "SCO2; CYO1; MVI11.22", "gene_names_refseq": "CYO1; MVI11.22; SCO2; SHI-YO-U MEANS COTYLEDON IN JAPANESE; SNOWY COTYLEDON 2", "protein_names_uniprotkb": "Protein disulfide-isomerase SCO2; 5.3.4.1; Protein SNOWY COTYLEDON 2", "protein_names_refseq": "protein disulfide isomerase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19220)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10907853;14593172;17921316;18209955;22040291;27862469", "class_list": "", "function": "Protein disulfide-isomerase involved in chloroplast development in cotyledons. Involved in the process of vesicle-derived thylakoid formation, probably at the level of the integration and folding of LHCB proteins at the initial location of integration. Acts only in germinating seeds after dormancy, during the transition from heterotrophic to autotrophic growth., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003756 protein disulfide isomerase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0017004 cytochrome complex assembly;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q93YN0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YN1-1", "uniprot_id": [ { "id": "CRPK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YN1", "type": "external" } ], "mass": 43289.0, "length": 390, "protein_name": "Cold-responsive protein kinase 1", "gene_name": "CRPK1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_564003", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564003", "type": "external" } ], "gene_names_uniprotkb": "CRPK1; F19K19.4", "gene_names_refseq": "F19K19.4; F19K19_4", "protein_names_uniprotkb": "Cold-responsive protein kinase 1; 2.7.11.1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16670)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;17142483;23572148;25561503;27862469;28344081", "class_list": "", "function": "Negative regulator of freezing tolerance that phosphorylates 14-3-3 proteins (e.g. GRF6) thus triggering their translocation from the cytosol to the nucleus in response to cold stress., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FX80", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0009409 response to cold;GO:0046777 protein autophosphorylation;GO:0002237 response to molecule of bacterial origin;GO:0009625 response to insect;GO:0050826 response to freezing", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93YN1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YN8-1", "uniprot_id": [ { "id": "RMR41_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YN8", "type": "external" } ], "mass": 32867.0, "length": 296, "protein_name": "Remorin 4.1", "gene_name": "REM4.1", "organism": "Arabidopsis", "refseq_name": "Remorin family protein", "refseq_ac": [ { "id": "NP_567050", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567050", "type": "external" } ], "gene_names_uniprotkb": "REM4.1; T8H10.14", "gene_names_refseq": "AtREM4.1; REM4.1; remorin group 4 1", "protein_names_uniprotkb": "Remorin 4.1; AtREM4.1; Remorin group 4 member 1", "protein_names_refseq": "Remorin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57540)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;17984200;21768351;23328941;25289013;25561503;27862469;28011693", "class_list": "", "function": "Collaborates with REM4.2 to positively regulate the BCTV and BSCTV susceptibility., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SCL9", "ec_number_list": [], "go_molecular_function": "GO:0019900 kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid;GO:0010555 response to mannitol", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q93YN8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YN9-1", "uniprot_id": [ { "id": "IPPK_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YN9", "type": "external" } ], "mass": 50509.0, "length": 451, "protein_name": "Inositol-pentakisphosphate 2-kinase", "gene_name": "IPK1", "organism": "Arabidopsis", "refseq_name": "inositol-pentakisphosphate 2-kinase 1", "refseq_ac": [ { "id": "NP_568613", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568613", "type": "external" } ], "gene_names_uniprotkb": "IPK1; MJB21.19", "gene_names_refseq": "ATIPK1; IPK1; M40H3; MJB21.19; MJB21_19; inositol-pentakisphosphate 2-kinase 1", "protein_names_uniprotkb": "Inositol-pentakisphosphate 2-kinase; 2.7.1.158; AtIPK1; Inositol-1,3,4,5,6-pentakisphosphate 2-kinase; Ins(1,3,4,5,6)P5 2-kinase; InsP5 2-kinase", "protein_names_refseq": "inositol-pentakisphosphate 2-kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42810)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "14593172;16107538;16223361;20453199;22223895;22362712;22684075;22745128;27862469;9501997", "class_list": "", "function": "Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate). Phytate is a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate store in plant seeds. Also phosphorylates Ins(1,3,4,6)P4 and Ins(1,4,5,6)P4 to produce Ins(1,2,3,4,6)P5 and Ins(1,2,4,5,6)P5., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FMY6", "ec_number_list": [ { "id": "2.7.1.158", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.158", "type": "external" } ], "go_molecular_function": "GO:0035299 inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0032942 inositol-1,4,5,6-tetrakisphosphate 2-kinase activity;GO:0102731 inositol-1,3,4,6-tetrakisphosphate 2-kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0051607 defense response to virus;GO:0042742 defense response to bacterium;GO:0055062 phosphate ion homeostasis;GO:0050832 defense response to fungus;GO:0030643 intracellular phosphate ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q93YN9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YQ1-1", "uniprot_id": [ { "id": "RTOR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YQ1", "type": "external" } ], "mass": 147963.0, "length": 1344, "protein_name": "Regulatory-associated protein of TOR 1", "gene_name": "RAPTOR1", "organism": "Arabidopsis", "refseq_name": "Regulatory-associated protein of TOR 1", "refseq_ac": [ { "id": "NP_566335", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566335", "type": "external" } ], "gene_names_uniprotkb": "RAPTOR1; RAPTOR1B; T16O11.22", "gene_names_refseq": "ATRAPTOR1B; RAPTOR1B; RAPTOR1", "protein_names_uniprotkb": "Regulatory-associated protein of TOR 1; AtRaptor1b; Protein RAPTOR 1B; Protein RAPTOR 1", "protein_names_refseq": "Regulatory-associated protein of TOR 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G08850)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130713;14593172;15607746;15720729;15845148;16377759;19376835;23111157;23776212;25561503;27545962;27862469;29167316;29236692;29654922", "class_list": "", "function": "Probable component of the plant TOR kinase pathway that recruits substrates for TOR (PubMed:16377759, PubMed:29236692). Modulates plant cell growth and regulates the activity of ATPK1 kinase in response to osmotic stress (PubMed:16377759)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SR85", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0019900 kinase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0031931 TORC1 complex;GO:0080008 Cul4-RING E3 ubiquitin ligase complex;GO:0009507 chloroplast", "go_biological_process": "GO:0010506 regulation of autophagy;GO:0030307 positive regulation of cell growth;GO:0010507 negative regulation of autophagy;GO:0031929 TOR signaling;GO:0009267 cellular response to starvation", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q93YQ1-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YV0-1", "uniprot_id": [ { "id": "GES_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YV0", "type": "external" } ], "mass": 101895.0, "length": 877, "protein_name": "(E,E)-geranyllinalool synthase", "gene_name": "GES", "organism": "Arabidopsis", "refseq_name": "terpene synthase 04", "refseq_ac": [ { "id": "NP_564772", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564772", "type": "external" } ], "gene_names_uniprotkb": "GES; F11P17.15; LIS; TPS04; TPS4", "gene_names_refseq": "F11P17.15; F11P17_15; GERANYLLINALOOL SYNTHASE; GES; TERPENE SYNTHASE 4; TPS04; TPS4; terpene synthase 04", "protein_names_uniprotkb": "(E,E)-geranyllinalool synthase; 4.2.3.144; AtGES; AtTPS04; Terpenoid synthase 4", "protein_names_refseq": "terpene synthase 04", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G61120)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;12207221;12566586;12572612;12777052;14593172;16021335;18398052;18400103;18842097;21088219;21334702;27862469", "class_list": "", "function": "Involved in the biosynthesis of homoterpenes, attractants of herbivores parasitoids and predators (e.g. predatory mites and parasitoid wasps) (PubMed:21334702). Involved in diterpene (C20) biosynthesis (PubMed:18398052, PubMed:18842097). Catalyzes the conversion of geranylgeranyl diphosphate to (E,E)-geranyllinalool, the precursor of the insect-induced volatile C16-homoterpene TMTT (PubMed:18398052, PubMed:18842097)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22733;Q84UU3", "ec_number_list": [ { "id": "4.2.3.144", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.144", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0010333 terpene synthase activity;GO:0080013 (E,E)-geranyllinalool synthase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0009617 response to bacterium;GO:0009611 response to wounding;GO:0000304 response to singlet oxygen;GO:0009753 response to jasmonic acid;GO:0016102 diterpenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q93YV0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YV5-1", "uniprot_id": [ { "id": "DA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YV5", "type": "external" } ], "mass": 45049.0, "length": 401, "protein_name": "E3 ubiquitin-protein ligase DA2", "gene_name": "DA2", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_001185425", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185425", "type": "external" } ], "gene_names_uniprotkb": "DA2; F3F9.7", "gene_names_refseq": "DA (large in Chinese) 2; DA2; F3F9.7; F3F9_7", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase DA2; 2.3.2.27; RING-type E3 ubiquitin transferase DA2", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78420)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;23328941;24045020;27862469;28167503", "class_list": "", "function": "E3 ubiquitin-protein ligase involved in the regulation of organ and seed size. Acts synergistically with DA1 to regulate seed size. Functions synergistically with DA1 to restrict cell proliferation in the maternal integuments of ovules and developing seeds. Seems to function independently of BB. Possesses E3 ubiquitin-protein ligase activity in vitro (PubMed:24045020). Polyubiquitinates DA1, DAR1 and DAR2, but not DAR3 (PubMed:28167503)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9M9F8", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0046620 regulation of organ growth;GO:0080113 regulation of seed growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q93YV5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YW7-1", "uniprot_id": [ { "id": "CRLS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YW7", "type": "external" } ], "mass": 38042.0, "length": 341, "protein_name": "Cardiolipin synthase (CMP-forming)", "gene_name": "CLS", "organism": "Arabidopsis", "refseq_name": "cardiolipin synthase", "refseq_ac": [ { "id": "NP_567273", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567273", "type": "external" } ], "gene_names_uniprotkb": "CLS; PGP3; T4B21.19", "gene_names_refseq": "CLS; T4B21.19; T4B21_19; cardiolipin synthase", "protein_names_uniprotkb": "Cardiolipin synthase (CMP-forming); 2.7.8.41; CLS; PGP synthase 3; Phosphatidylglycerophosphate synthase 3", "protein_names_refseq": "cardiolipin synthase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04870)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;15527784;15811335;24151294;24443516;27862469", "class_list": "", "function": "Catalyzes the synthesis of cardiolipin (CL) (diphosphatidylglycerol) by specifically transferring a phosphatidyl group from CDP-diacylglycerol to phosphatidylglycerol (PG) (PubMed:15527784, PubMed:15811335, PubMed:24151294). CL is a key phospholipid in mitochondrial membranes and plays important roles in maintaining the functional integrity and dynamics of mitochondria under both optimal and stress conditions (PubMed:24151294, PubMed:24443516). Possesses high activity with PG species carrying dioleoyl groups and low activity with species carrying one or two palmitoyl groups (PubMed:15811335). Cannot catalyze the phosphatidyl group transfer from one PG molecule to another to form CL (PubMed:15811335). In mitochondrial fission, CL stabilizes the protein complex of the major mitochondrial fission factors, DRP3A and DRP3B (PubMed:24443516)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBT8;Q9M0Z2;Q9ZS87", "ec_number_list": [ { "id": "2.7.8.41", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.8.41", "type": "external" } ], "go_molecular_function": "GO:0043337 cardiolipin synthase (CMP-forming);GO:0030145 manganese ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0032049 cardiolipin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q93YW7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93YZ7-1", "uniprot_id": [ { "id": "ILVH1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93YZ7", "type": "external" } ], "mass": 53873.0, "length": 491, "protein_name": "Acetolactate synthase small subunit 1, chloroplastic", "gene_name": "AHASS1", "organism": "Arabidopsis", "refseq_name": "ACT domain-containing small subunit of acetolactate synthase protein", "refseq_ac": [ { "id": "NP_850172", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850172", "type": "external" } ], "gene_names_uniprotkb": "AHASS1; AIP1; F20M17.15", "gene_names_refseq": "F20M17.15; F20M17_15", "protein_names_uniprotkb": "Acetolactate synthase small subunit 1, chloroplastic; ALS-interacting protein 1; Acetohydroxyacid synthase small subunit 1", "protein_names_refseq": "ACT domain-containing small subunit of acetolactate synthase protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31810)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;11389597;11852076;14593172;19423640;27862469;28388946;28522547;32640464;34834615", "class_list": "", "function": "Regulatory subunit of acetohydroxy-acid synthase (PubMed:11389597, PubMed:11852076, PubMed:28388946). Involved in the feed-back inhibition by branched-chain amino acids (PubMed:11389597, PubMed:11852076, PubMed:28388946). Contains 2 repeats, each of them being able to activate partially the catalytic subunit (PubMed:11389597, PubMed:11852076). The enzyme reconstituted with the first repeat is inhibited by leucine, but not by valine or isoleucine and the enzyme reconstituted with the second repeat is not inhibited by any branched-chain amino acid (PubMed:11389597, PubMed:11852076). In vitro, inhibited by valine and leucine, but not isoleucine (PubMed:28522547). Involved in valine and leucine homeostasis (PubMed:28522547). Required for reproductive development and sodium homeostasis (PubMed:28388946). May play a role under prolonged flooding or oxygen deficiency (PubMed:34834615)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z282;F4IRS9;Q3E6W5;Q9SKB9", "ec_number_list": [], "go_molecular_function": "GO:0003984 acetolactate synthase activity;GO:1990610 acetolactate synthase regulator activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0001666 response to hypoxia;GO:0009082 branched-chain amino acid biosynthetic process;GO:0009099 L-valine biosynthetic process;GO:0009097 isoleucine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q93YZ7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Z04-1", "uniprot_id": [ { "id": "PLY13_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Z04", "type": "external" } ], "mass": 53929.0, "length": 501, "protein_name": "Probable pectate lyase 13", "gene_name": "PMR6", "organism": "Arabidopsis", "refseq_name": "Pectin lyase-like superfamily protein", "refseq_ac": [ { "id": "NP_191052", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191052", "type": "external" } ], "gene_names_uniprotkb": "PMR6; F28P10_100", "gene_names_refseq": "PMR6; powdery mildew resistant 6", "protein_names_uniprotkb": "Probable pectate lyase 13; 4.2.2.2; Powdery mildew susceptibility protein; Powdery mildew-resistant mutant 6", "protein_names_refseq": "Pectin lyase-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54920)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;12215508;14593172;23776212;27862469", "class_list": "", "function": "Susceptibility factor required for infection by most powdery mildews, but not by unrelated pathogens. Exact function not known, but clearly affects cell wall composition., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 2, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9SV40", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030570 pectate lyase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0098552 side of membrane", "go_biological_process": "GO:0098542 defense response to other organism;GO:0045490 pectin catabolic process;GO:0009664 plant-type cell wall organization;GO:0042547 cell wall modification involved in multidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q93Z04-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Z18-1", "uniprot_id": [ { "id": "CKL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Z18", "type": "external" } ], "mass": 46891.0, "length": 415, "protein_name": "Casein kinase 1-like protein 3", "gene_name": "CKL3", "organism": "Arabidopsis", "refseq_name": "casein kinase I-like 3", "refseq_ac": [ { "id": "NP_001329054", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329054", "type": "external" } ], "gene_names_uniprotkb": "CKL3; F16A16.10", "gene_names_refseq": "F25O24.3; casein kinase I-like 3; ckl3", "protein_names_uniprotkb": "Casein kinase 1-like protein 3; 2.7.11.1; CK1.3; Protein CASEIN KINASE I-LIKE 3", "protein_names_refseq": "casein kinase I-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28880)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11910074;14593172;16126836;21477822;23111157;23897926;25561503;27862469", "class_list": "", "function": "Protein kinase involved in blue light responses (e.g. hypocotyl elongation and flowering) by phosphorylating CRY2 to reduce its stability., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVV5", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0009785 blue light signaling pathway;GO:0006897 endocytosis;GO:0007165 signal transduction;GO:0009637 response to blue light;GO:0009640 photomorphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q93Z18-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Z30-1", "uniprot_id": [ { "id": "BHP_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Z30", "type": "external" } ], "mass": 52618.0, "length": 459, "protein_name": "Serine/threonine-protein kinase 12", "gene_name": "BHP", "organism": "Arabidopsis", "refseq_name": "Integrin-linked protein kinase family", "refseq_ac": [ { "id": "NP_001329842", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329842", "type": "external" } ], "gene_names_uniprotkb": "BHP; F13C5.120; STY12", "gene_names_refseq": "F13C5.120; F13C5_120", "protein_names_uniprotkb": "Serine/threonine-protein kinase 12; 2.7.11.1; Protein BLUE LIGHT-DEPENDENT H(+)-ATPASE PHOSPHORYLATION", "protein_names_refseq": "Integrin-linked protein kinase family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18950)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "10617198;14593172;16429265;18463617;19245862;19376835;19423640;20466843;22223895;23111157;23328941;23572148;23660473;23776212;25561503;26187819;27862469;28011693;28358053;29167316;30833711", "class_list": "", "function": "Serine/threonine protein kinase that phosphorylates proteins on serine and threonine residues (By similarity). Mediates blue light-dependent stomatal opening in guard cells by promoting plasma membrane-type ATPases (AHA1 and AHA2) phosphorylation (PubMed:28358053)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2R6;O49409", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0007165 signal transduction;GO:0007229 integrin-mediated signaling pathway;GO:0009637 response to blue light;GO:0010119 regulation of stomatal movement", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q93Z30-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Z53-1", "uniprot_id": [ { "id": "PKP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Z53", "type": "external" } ], "mass": 62615.0, "length": 571, "protein_name": "Plastidial pyruvate kinase 3, chloroplastic", "gene_name": "PKP3", "organism": "Arabidopsis", "refseq_name": "plastidial pyruvate kinase 3", "refseq_ac": [ { "id": "NP_564402", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564402", "type": "external" } ], "gene_names_uniprotkb": "PKP3; F5D14.22", "gene_names_refseq": "F5D14.22; F5D14_22; F5F19.10; F5F19_10; PKp3; plastidial pyruvate kinase 3", "protein_names_uniprotkb": "Plastidial pyruvate kinase 3, chloroplastic; 2.7.1.40; PKP-BETA2; PKp3; Plastidic pyruvate kinase beta subunit 2; Pyruvate kinase I; Pyruvate kinase isozyme B2, chloroplastic", "protein_names_refseq": "plastidial pyruvate kinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32440)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;17557808;17892448;18431481;27862469", "class_list": "", "function": "Required for plastidial pyruvate kinase activity., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LQL3", "ec_number_list": [ { "id": "2.7.1.40", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.40", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0030955 potassium ion binding;GO:0004743 pyruvate kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006096 glycolytic process;GO:0010431 seed maturation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q93Z53-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZB2-1", "uniprot_id": [ { "id": "KO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZB2", "type": "external" } ], "mass": 58160.0, "length": 509, "protein_name": "Ent-kaurene oxidase, chloroplastic", "gene_name": "KO", "organism": "Arabidopsis", "refseq_name": "GA requiring 3", "refseq_ac": [ { "id": "NP_197962", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197962", "type": "external" } ], "gene_names_uniprotkb": "KO; CYP701A3; GA3; KO1; T1N24.23", "gene_names_refseq": "ARABIDOPSIS THALIANA ENT-KAURENE OXIDASE 1; ATKO1; CYP701A3; CYTOCHROME P450 701 A3; ENT-KAURENE OXIDASE; GA requiring 3; GA3; KO; T1N24.23; T1N24_23", "protein_names_uniprotkb": "Ent-kaurene oxidase, chloroplastic; 1.14.14.86; AtKO1; Cytochrome P450 701A3", "protein_names_refseq": "GA requiring 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25900)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11722763;11737781;14593172;20698828;27862469;9671797;9952446", "class_list": "", "function": "Catalyzes three successive oxidations of the 4-methyl group of ent-kaurene giving kaurenoic acid, a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81188;Q9S7C8", "ec_number_list": [ { "id": "1.14.14.86", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.86", "type": "external" } ], "go_molecular_function": "GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0019825 oxygen binding;GO:0052615 ent-kaurene oxidase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0009507 chloroplast;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0009740 gibberellic acid mediated signaling pathway;GO:0009686 gibberellin biosynthetic process;GO:0010241 ent-kaurene oxidation to kaurenoic acid", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q93ZB2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZE8-1", "uniprot_id": [ { "id": "SDF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZE8", "type": "external" } ], "mass": 23935.0, "length": 218, "protein_name": "Stromal cell-derived factor 2-like protein", "gene_name": "SDF2", "organism": "Arabidopsis", "refseq_name": "stromal cell-derived factor 2-like protein precursor", "refseq_ac": [ { "id": "NP_565585", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565585", "type": "external" } ], "gene_names_uniprotkb": "SDF2; F13D4.70", "gene_names_refseq": "ATSDF2-LIKE; ATSDL; Arabidopsis thaliana STROMAL CELL-DERIVED FACTOR 2-like protein precursor; AtSDF2; F13D4.70; F13D4_70; SDF2; stromal cell-derived factor 2-like protein precursor", "protein_names_uniprotkb": "Stromal cell-derived factor 2-like protein; AtSDF2; SDF2-like protein", "protein_names_refseq": "stromal cell-derived factor 2-like protein precursor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G25110)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;19763086;20378538;27862469", "class_list": "", "function": "Involved in the endoplasmic reticulum (ER) protein quality control and unfolded protein response. May be involved in the quality control of glycoproteins. Forms a complex in the ER with ERDJ3B and MED37A/BIP1 which is required for the proper accumulation and function of the surface-exposed leucine-rich repeat receptor kinases EFR involved in pathogen-associated molecular pattern (PAMP) triggered immunity., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O81720;Q9SEZ5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005773 vacuole;GO:0009507 chloroplast", "go_biological_process": "GO:0002221 pattern recognition receptor signaling pathway;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q93ZE8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZG7-1", "uniprot_id": [ { "id": "RH38_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZG7", "type": "external" } ], "mass": 55384.0, "length": 496, "protein_name": "DEAD-box ATP-dependent RNA helicase 38", "gene_name": "RH38", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_190879", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190879", "type": "external" } ], "gene_names_uniprotkb": "RH38; LOS4; T4D2.40", "gene_names_refseq": "LOS4; LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4", "protein_names_uniprotkb": "DEAD-box ATP-dependent RNA helicase 38; 3.6.4.13; Low expression of osmotically-responsive genes 4 protein; Protein CRYOPHYTE", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G53110)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;12165572;14593172;15598798;17168887;22223895;22898497;23111157;23776212;24265739;27862469;28011693", "class_list": "", "function": "ATP-dependent RNA helicase essential for mRNA export from the nucleus. Plays an important role in the positive regulation of CBF/DREB transcription factors., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SCQ0", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0016973 poly(A)+ mRNA export from nucleus;GO:0009409 response to cold;GO:0009408 response to heat;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q93ZG7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZH0-1", "uniprot_id": [ { "id": "LYM1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZH0", "type": "external" } ], "mass": 43490.0, "length": 416, "protein_name": "LysM domain-containing GPI-anchored protein 1", "gene_name": "LYM1", "organism": "Arabidopsis", "refseq_name": "lysm domain GPI-anchored protein 1 precursor", "refseq_ac": [ { "id": "NP_564153", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564153", "type": "external" } ], "gene_names_uniprotkb": "LYM1; T26F17.10; T26F17_5", "gene_names_refseq": "LYM1; LYP2; LysM-containing receptor protein 2; T26F17.10; T26F17_10; lysm domain GPI-anchored protein 1 precursor", "protein_names_uniprotkb": "LysM domain-containing GPI-anchored protein 1", "protein_names_refseq": "lysm domain GPI-anchored protein 1 precursor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G21880)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;22106285;23572148;27862469;28011693", "class_list": "", "function": "Required as a cell surface receptor for peptidoglycan (PGN) elicitor signaling leading to innate immunity. Plays an essential role in detecting PGNs and restricting bacterial growth (of Pseudomonas syringae pv. tomato DC3000 for example)., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q5XF34;Q9SFE8", "ec_number_list": [], "go_molecular_function": "GO:0042834 peptidoglycan binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0098552 side of membrane", "go_biological_process": "GO:0006952 defense response;GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q93ZH0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZR1-1", "uniprot_id": [ { "id": "ELP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZR1", "type": "external" } ], "mass": 63694.0, "length": 565, "protein_name": "Elongator complex protein 3", "gene_name": "HAG3", "organism": "Arabidopsis", "refseq_name": "radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein", "refseq_ac": [ { "id": "NP_568725", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568725", "type": "external" } ], "gene_names_uniprotkb": "HAG3; EAST1; ELO3; ELP3; MXI22.3", "gene_names_refseq": "AtELP3; EAST1; ELO3; ELONGATA 3; ELP3; Elongator protein 3; HAC8; HAG3; HISTONE ACETYLTRANSFERASE 8; HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 3; MXI22.3; MXI22_3; enhancer-of-asymmetric leaves-two 1", "protein_names_uniprotkb": "Elongator complex protein 3; 2.3.1.311; AtELP3; Elongator component 3; Protein ELONGATA 3; Protein ENHANCER-OF-ASYMMETRIC-LEAVES-TWO1; tRNA uridine(34) acetyltransferase", "protein_names_refseq": "radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50320)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "12466527;14593172;15894610;20080602;20398216;21620701;21700721;22026817;22060019;22404109;23969312;25907565;27862469;9734815", "class_list": "", "function": "Catalytic tRNA acetyltransferase subunit of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine) (PubMed:20398216). In the elongator complex, acts as a tRNA uridine(34) acetyltransferase by mediating formation of carboxymethyluridine in the wobble base at position 34 in tRNAs (By similarity). Promotes organ development by modulating cell division rate (PubMed:20080602). Required for auxin distribution or signaling (PubMed:20080602). Required for meristem cell cycle activation at the time of germination (PubMed:23969312). Mediates the establishment of leaf polarity independently of AS2 and the ta-siRNA-related pathway (PubMed:21700721). Indirectly involved in negatively regulating the expression of genes that participate in UV-B responses, such as DNA repair enzymes and enzymes that participate in sunscreen pigment biosynthesis (PubMed:25907565)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FK40", "ec_number_list": [ { "id": "2.3.1.311", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.311", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0000049 tRNA binding;GO:0106261 tRNA uridine(34) acetyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000791 euchromatin;GO:0033588 elongator holoenzyme complex", "go_biological_process": "GO:0051301 cell division;GO:0002098 tRNA wobble uridine modification;GO:0035265 organ growth;GO:0002926 tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation;GO:0009294 DNA-mediated transformation", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q93ZR1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZV7-1", "uniprot_id": [ { "id": "LA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZV7", "type": "external" } ], "mass": 48096.0, "length": 433, "protein_name": "La protein 1", "gene_name": "LA1", "organism": "Arabidopsis", "refseq_name": "La protein 1", "refseq_ac": [ { "id": "NP_001031777", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031777", "type": "external" } ], "gene_names_uniprotkb": "LA1; F4D11.80", "gene_names_refseq": "AtLa1; F4D11.80; F4D11_80; La protein 1; La1", "protein_names_uniprotkb": "La protein 1; AtLa1", "protein_names_refseq": "La protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32720)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617198;14593172;17459889;19299548;19376835;20466843;23328941;23572148;23660473;23776212;24601666;25561503;27862469;29167316", "class_list": "", "function": "Binds to the 3' poly(U) terminus of nascent RNA polymerase III transcripts, protecting them from exonuclease digestion and facilitating their folding and maturation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JV47;O65529;Q8L7E4", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:1990904 ribonucleoprotein complex;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0042254 ribosome biogenesis;GO:0006364 rRNA processing;GO:0042780 tRNA 3'-end processing;GO:0031126 sno(s)RNA 3'-end processing;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q93ZV7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940A7-1", "uniprot_id": [ { "id": "TA12B_ARATH", "url": "https://www.uniprot.org/uniprot/Q940A7", "type": "external" } ], "mass": 74805.0, "length": 683, "protein_name": "Transcription initiation factor TFIID subunit 12b", "gene_name": "TAF12B", "organism": "Arabidopsis", "refseq_name": "Transcription initiation factor TFIID subunit A", "refseq_ac": [ { "id": "NP_564023", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564023", "type": "external" } ], "gene_names_uniprotkb": "TAF12B; CKH1; EER4; F28G4.8", "gene_names_refseq": "CKH1; CYTOKININ-HYPERSENSITIVE 1; EER4; ENHANCED ETHYLENE RESPONSE 4; F1L3.13; TAF12B; TBP-ASSOCIATED FACTOR 12B", "protein_names_uniprotkb": "Transcription initiation factor TFIID subunit 12b; AtTAF12b; Protein CYTOKININ-HYPERSENSITIVE 1; Protein ENHANCED ETHYLENE RESPONSE 4; TBP-associated factor 12b", "protein_names_refseq": "Transcription initiation factor TFIID subunit A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17440)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;15527982;17340043;17526916;23572148;25561503;27862469;28011693;28154133", "class_list": "", "function": "TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Required for the expression of a subset of ethylene-responsive genes. Probably involved in the negative regulation of cytokinin sensitivity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LQJ7", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046982 protein heterodimerization activity;GO:0003743 translation initiation factor activity;GO:0017025 TBP-class protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005669 transcription factor TFIID complex;GO:0000124 SAGA complex", "go_biological_process": "GO:0051123 RNA polymerase II preinitiation complex assembly;GO:0009736 cytokinin-activated signaling pathway;GO:0009867 jasmonic acid mediated signaling pathway;GO:0010104 regulation of ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q940A7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940B8-1", "uniprot_id": [ { "id": "KN13A_ARATH", "url": "https://www.uniprot.org/uniprot/Q940B8", "type": "external" } ], "mass": 89082.0, "length": 794, "protein_name": "Kinesin-like protein KIN-13A", "gene_name": "KIN13A", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_188285", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188285", "type": "external" } ], "gene_names_uniprotkb": "KIN13A; KINESIN-13A; MGL6.9", "gene_names_refseq": "ATKINESIN-13A; KINESIN-13A", "protein_names_uniprotkb": "Kinesin-like protein KIN-13A; AtKIN13A; AtKINESIN-13A", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16630)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10819329;11472632;14593172;15574882;16448571;19939242;20832900;22038119;23776212;24280391;25232944;25561503;27862469", "class_list": "", "function": "Internal motor kinesin involved in trichome morphogenesis (PubMed:15574882). Participates in regulating the formation of Golgi-associated vesicles (PubMed:19939242). Plays a central role in microtubule disassembly via the active ARAC10-ICR5 cascade, which establishes the secondary cell wall pattern in metaxylem vessel cells (PubMed:24280391). Acts redundantly with KIN13B to modulate cell wall synthesis and cell expansion via the THE1 pathway (PubMed:25232944)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q56WU1;Q9LUS1", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005874 microtubule;GO:0005795 Golgi stack;GO:0009531 secondary cell wall", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0007019 microtubule depolymerization;GO:1903338 regulation of cell wall organization or biogenesis;GO:0009834 plant-type secondary cell wall biogenesis;GO:0010090 trichome morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q940B8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940G0-1", "uniprot_id": [ { "id": "TMN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q940G0", "type": "external" } ], "mass": 66893.0, "length": 589, "protein_name": "Transmembrane 9 superfamily member 1", "gene_name": "TMN1", "organism": "Arabidopsis", "refseq_name": "transmembrane nine 1", "refseq_ac": [ { "id": "NP_563881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563881", "type": "external" } ], "gene_names_uniprotkb": "TMN1; EMP12; T19D16.13", "gene_names_refseq": "AtTMN1; EMP12; T19D16.13; T19D16_13; TMN1; endomembrane protein 12; transmembrane nine 1", "protein_names_uniprotkb": "Transmembrane 9 superfamily member 1; AtTMN1; Endomembrane protein 12; Transmembrane nine protein 1", "protein_names_refseq": "transmembrane nine 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10950)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;20681974;22570441;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04091;Q0WMB1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0072657 protein localization to membrane", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q940G0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940J1-1", "uniprot_id": [ { "id": "ATB16_ARATH", "url": "https://www.uniprot.org/uniprot/Q940J1", "type": "external" } ], "mass": 33395.0, "length": 294, "protein_name": "Homeobox-leucine zipper protein ATHB-16", "gene_name": "ATHB-16", "organism": "Arabidopsis", "refseq_name": "homeobox protein 16", "refseq_ac": [ { "id": "NP_195716", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195716", "type": "external" } ], "gene_names_uniprotkb": "ATHB-16; T5J17.230", "gene_names_refseq": "ATHB-16; ATHB16; HB16; T5J17.230; T5J17_230; homeobox protein 16", "protein_names_uniprotkb": "Homeobox-leucine zipper protein ATHB-16; HD-ZIP protein ATHB-16; Homeodomain transcription factor ATHB-16", "protein_names_refseq": "homeobox protein 16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G40060)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;14623244;16055682;27862469;28011693", "class_list": "", "function": "Probable transcription factor that may function as a negative regulator of the flowering time response to photoperiod. May act to repress cell expansion during plant development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SMQ1;Q9SWZ8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0030308 negative regulation of cell growth;GO:0009637 response to blue light;GO:0048510 regulation of timing of transition from vegetative to reproductive phase", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q940J1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940L4-1", "uniprot_id": [ { "id": "PLIP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q940L4", "type": "external" } ], "mass": 73044.0, "length": 649, "protein_name": "Phospholipase A1 PLIP3, chloroplastic", "gene_name": "PLIP3", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_567131", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567131", "type": "external" } ], "gene_names_uniprotkb": "PLIP3; F26K9_20", "gene_names_refseq": "", "protein_names_uniprotkb": "Phospholipase A1 PLIP3, chloroplastic; 3.1.1.26; 3.1.1.32; Galactolipase PLIP3; Protein PLASTID LIPASE 3", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G62590)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;27862469;29666162", "class_list": "", "function": "Sn-1-specific phospholipase A1 that catalyzes the initial step of oxylipins and jasmonate (JA) biosynthesis. Hydrolyzes polyunsaturated acyl groups preferentially from chloroplastic phosphatidylglycerol (PG). May function downstream of abscisic acid (ABA), and provide a link between ABA-mediated abiotic stress responses and oxylipin and JA signalings. In vitro, possesses broad substrate specificity. Can hydrolyze the galactolipids monogalactosyldiacylglycerol (MGDG) and digalactosyldiacylglycerol (DGDG), the sulfolipid sulfoquinovosyldiacylglycerol (SQDG), and the phoshpolipids phosphatidylcholine (PC), and phosphatidylglycerol (PG)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZK6", "ec_number_list": [ { "id": "3.1.1.32", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.32", "type": "external" }, { "id": "3.1.1.26", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.26", "type": "external" } ], "go_molecular_function": "GO:0008970 phospholipase A1 activity;GO:0047714 galactolipase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0002213 defense response to insect;GO:0031349 positive regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q940L4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940Q8-1", "uniprot_id": [ { "id": "IX10L_ARATH", "url": "https://www.uniprot.org/uniprot/Q940Q8", "type": "external" } ], "mass": 47195.0, "length": 415, "protein_name": "Probable beta-1,4-xylosyltransferase IRX10L", "gene_name": "IRX10L", "organism": "Arabidopsis", "refseq_name": "Exostosin family protein", "refseq_ac": [ { "id": "NP_568941", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568941", "type": "external" } ], "gene_names_uniprotkb": "IRX10L; GUT1; GUT2; MAC9.17", "gene_names_refseq": "GUT1; MAC9.17; MAC9_17", "protein_names_uniprotkb": "Probable beta-1,4-xylosyltransferase IRX10L; 2.4.2.-; AtGUT1; AtGUT2; Glucuronoxylan glucuronosyltransferase 1; Glucuronoxylan glucuronosyltransferase 2; Protein IRREGULAR XYLEM 10-like; Xylan xylosyltransferase IRX10L", "protein_names_refseq": "Exostosin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G61840)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "12451175;14593172;18980649;18980662;20424005;24905498;27862469;9628582", "class_list": "glycogene;glycosyltransferase", "function": "Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q8LB70;Q9FLS5;W8PUW2", "ec_number_list": [], "go_molecular_function": "GO:0080116 glucuronoxylan glucuronosyltransferase activity;GO:0047517 1,4-beta-D-xylan synthase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005797 Golgi medial cisterna;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0042546 cell wall biogenesis;GO:0071555 cell wall organization;GO:0009834 plant-type secondary cell wall biogenesis;GO:0010417 glucuronoxylan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q940Q8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940V4-1", "uniprot_id": [ { "id": "C85A2_ARATH", "url": "https://www.uniprot.org/uniprot/Q940V4", "type": "external" } ], "mass": 53815.0, "length": 465, "protein_name": "Cytochrome P450 85A2", "gene_name": "CYP85A2", "organism": "Arabidopsis", "refseq_name": "brassinosteroid-6-oxidase 2", "refseq_ac": [ { "id": "NP_566852", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566852", "type": "external" } ], "gene_names_uniprotkb": "CYP85A2; BR6OX2; T20F20.9; T20F20_6", "gene_names_refseq": "BR6OX2; CYP85A2; brassinosteroid-6-oxidase 2", "protein_names_uniprotkb": "Cytochrome P450 85A2; 1.14.14.-; 1.14.14.179; 1.14.14.180; 28-norcastasterone synthase; 28-nordeoxoteasterone synthase; 28-norteasterone synthase; 28-nortyphasterol synthase; 3-dehydroteasterone synthase; AtCYP85A2; BR6ox 2; Brassinolide synthase; Brassinosteroid-6-oxidase 2; C6-oxidase 2; Castasterone synthase; Teasterone synthase; Typhasterol synthase", "protein_names_refseq": "brassinosteroid-6-oxidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G30180)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10907853;11402205;12529536;14593172;15710611;16024588;18685225;22170941;27455172;27862469;32333772", "class_list": "", "function": "Mediates Baeyer-Villiger oxidation and catalyzes the C6-oxidation step and lactonization in brassinosteroids biosynthesis (PubMed:15710611, PubMed:16024588). Converts 6-deoxocastasterone (6-deoxoCS) to castasterone (CS), and castasterone to brassinolide (BL) (PubMed:15710611, PubMed:16024588). May also convert 6-deoxoteasterone (6-deoxoTE) to teasterone (TE), 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo-3-DHT) to 3-dehydroteasterone (3DT, 3-DHT), and 6-deoxotyphasterol (6-deoxoTY) to typhasterol (TY). Also seems to be able to convert teasterone (TE) and typhasterol (TY) to 7-oxateasterone (7-OXTE) and 7-oxatyphasterol (7-OXTY), respectively (PubMed:18685225). Catalyzes the conversion of 6-deoxo-28-norteasterone (6-deoxo-28-norTE) to 28-norteasterone (28-norTE), 6-deoxo-28-nordeoxoteasterone (6-deoxo-28-nor-3-DHT) to 28-nordeoxoteasterone (28-nor-3-DHT), 6-deoxo-28-nortyphasterol (6-deoxo-28-norTY) to 28-nortyphasterol (28-norTY) and 6-deoxo-28-norcastasterone (6-deoxo-28-norCS) to 28-norcastasterone (28-norCS) (PubMed:22170941). Involved in a negative regulation of responses to abscisic acid (ABA) and drought tolerance (PubMed:16024588, PubMed:27455172)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFX3;Q9LH81", "ec_number_list": [ { "id": "1.14.14.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.-", "type": "external" }, { "id": "1.14.14.179", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.179", "type": "external" }, { "id": "1.14.14.180", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.180", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0004497 monooxygenase activity;GO:0102734 brassinolide synthase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0016132 brassinosteroid biosynthetic process;GO:0018343 protein farnesylation;GO:0009416 response to light stimulus;GO:0010268 brassinosteroid homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q940V4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940Y5-1", "uniprot_id": [ { "id": "PIN7_ARATH", "url": "https://www.uniprot.org/uniprot/Q940Y5", "type": "external" } ], "mass": 67588.0, "length": 619, "protein_name": "Auxin efflux carrier component 7", "gene_name": "PIN7", "organism": "Arabidopsis", "refseq_name": "Auxin efflux carrier family protein", "refseq_ac": [ { "id": "NP_564189", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564189", "type": "external" } ], "gene_names_uniprotkb": "PIN7; AEH1; T26J12.14", "gene_names_refseq": "ARABIDOPSIS PIN-FORMED 7; ATPIN7; PIN-FORMED 7; PIN7; T26J12.14; T26J12_14", "protein_names_uniprotkb": "Auxin efflux carrier component 7; AtPIN7", "protein_names_refseq": "Auxin efflux carrier family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G23080)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "11130712;14593172;14614497;15817418;17317660;17651370;19376835;20374526;20439545;23660473;24180465;25561503;27419465;27532006;27862469;28011693;30865619", "class_list": "", "function": "Acts as a component of the auxin efflux carrier (PubMed:14614497, PubMed:20439545). Mediates the initial auxin gradient which contributes to the establishment of the apical-basal axis in early embryogenesis (PubMed:14614497). Together with PIN3 and PIN4, involved in the connective auxin transport (CAT) that ensures communication across the shoot system, and modulates strigolactone-mediated shoot branching control (PubMed:30865619). The abcb19 pin3 pin4 pin7 quadruple mutant exhibits an additive phenotype on strigolactone-mediated bud outgrowth responses and shoot branching control (PubMed:30865619)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 20, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O49308;Q9SQH5", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0010329 auxin efflux transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0071469 cellular response to alkaline pH;GO:0009734 auxin-activated signaling pathway;GO:0009926 auxin polar transport;GO:0010315 auxin export across the plasma membrane;GO:0009942 longitudinal axis specification", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q940Y5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940Z2-1", "uniprot_id": [ { "id": "ARP5_ARATH", "url": "https://www.uniprot.org/uniprot/Q940Z2", "type": "external" } ], "mass": 83053.0, "length": 724, "protein_name": "Actin-related protein 5", "gene_name": "ARP5", "organism": "Arabidopsis", "refseq_name": "actin-related protein 5", "refseq_ac": [ { "id": "NP_001189870", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189870", "type": "external" } ], "gene_names_uniprotkb": "ARP5; MQC3.19; T2E22.30", "gene_names_refseq": "ACTIN-RELATED PROTEIN 5; ARP5; ATARP5; actin-related protein 5", "protein_names_uniprotkb": "Actin-related protein 5", "protein_names_refseq": "actin-related protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G12380)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10907853;11130713;11891255;14593172;15063870;19245862;19423640;19679120;25561503;27862469;28011693", "class_list": "", "function": "Probable subunit of a chromatin-remodeling complex. Involved in DNA repair. Required for multicellular development of all organs., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2X1;C8YXA1;F4J9R3;Q9C7A3;Q9LHH0", "ec_number_list": [], "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton;GO:0030234 enzyme regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0031011 Ino80 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006338 chromatin remodeling;GO:0006355 regulation of DNA-templated transcription;GO:0030029 actin filament-based process;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q940Z2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941C5-1", "uniprot_id": [ { "id": "CLE44_ARATH", "url": "https://www.uniprot.org/uniprot/Q941C5", "type": "external" } ], "mass": 12522.0, "length": 112, "protein_name": "CLAVATA3/ESR (CLE)-related protein 44", "gene_name": "CLE44", "organism": "Arabidopsis", "refseq_name": "CLAVATA3/ESR-RELATED 44", "refseq_ac": [ { "id": "NP_567397", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567397", "type": "external" } ], "gene_names_uniprotkb": "CLE44; F17N18", "gene_names_refseq": "CLAVATA3/ESR-RELATED 44; CLE44", "protein_names_uniprotkb": "CLAVATA3/ESR (CLE)-related protein 44; TDIF-like protein; Tracheary element differentiation inhibitory factor-like protein", "protein_names_refseq": "CLAVATA3/ESR-RELATED 44", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13195)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;14593172;16489133;16902140;18034320;18078779;18812507;20016993;27449136;27862469;28607033", "class_list": "", "function": "Extracellular signal peptide that regulates cell fate. May act with TDR as a ligand-receptor pair in a signal transduction pathway that represses tracheary element differentiation but promotes the formation of procambial cells adjacent to phloem cells in the veins. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFN1", "ec_number_list": [], "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0048046 apoplast", "go_biological_process": "GO:0045595 regulation of cell differentiation;GO:0045168 cell-cell signaling involved in cell fate commitment;GO:0010087 phloem or xylem histogenesis;GO:0010067 procambium histogenesis;GO:0010078 maintenance of root meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q941C5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941C7-1", "uniprot_id": [ { "id": "PSY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q941C7", "type": "external" } ], "mass": 7928.0, "length": 75, "protein_name": "Protein PSY1", "gene_name": "PSY1", "organism": "Arabidopsis", "refseq_name": "plant peptide containing sulfated tyrosine 1", "refseq_ac": [ { "id": "NP_200673", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200673", "type": "external" } ], "gene_names_uniprotkb": "PSY1; MZN1.100", "gene_names_refseq": "MZN1.10; MZN1_10; PSY1; plant peptide containing sulfated tyrosine 1", "protein_names_uniprotkb": "Protein PSY1", "protein_names_refseq": "plant peptide containing sulfated tyrosine 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58650)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10718197;14593172;17989228;25267325;27862469", "class_list": "", "function": "Promotes cellular proliferation and expansion (PubMed:17989228). Induces outward H(+) fluxes in roots (PubMed:25267325)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0042127 regulation of cell population proliferation;GO:0009658 chloroplast organization;GO:0048765 root hair cell differentiation;GO:0048767 root hair elongation;GO:0043476 pigment accumulation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q941C7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941D6-1", "uniprot_id": [ { "id": "HDA14_ARATH", "url": "https://www.uniprot.org/uniprot/Q941D6", "type": "external" } ], "mass": 45577.0, "length": 423, "protein_name": "Histone deacetylase 14, chloroplastic", "gene_name": "HDA14", "organism": "Arabidopsis", "refseq_name": "histone deacetylase 14", "refseq_ac": [ { "id": "NP_567921", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567921", "type": "external" } ], "gene_names_uniprotkb": "HDA14; ASDAC; F17M5.230", "gene_names_refseq": "ATHDA14; F17M5.230; F17M5_230; HDA14; histone deacetylase 14", "protein_names_uniprotkb": "Histone deacetylase 14, chloroplastic; 3.5.1.-; N-acetylserotonin deacetylase", "protein_names_refseq": "histone deacetylase 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33470)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;12466527;14593172;16176989;22363501;22404109;27862469;29061669;29247559", "class_list": "", "function": "Regulates lysine acetylation levels of plastid proteins related to photosynthesis (PubMed:29061669). Involved in the regulation of the activation state of RuBisCO, which is controlled by lysine acetylation of RuBisCO activase under low-light conditions (PubMed:29061669). Associates with alpha- and beta-tubulins and deacetylate alpha-tubulin (PubMed:22404109). Does not seem to be required for the cellular patterning in the root epidermis (PubMed:16176989). Involved in the regulation of melatonin biosynthesis by catalyzing the deacetylation of N-acetylserotonin to produce serotonin (PubMed:29247559). N-acetylserotonin is methylated by acetylserotonin O-methyltransferase (ASMT) to produce melatonin (N-acetyl-5-methoxytryptamine) (Probable). Deacetylates melatonin to produce 5-methoxytryptamine (PubMed:29247559). In vitro, deacetylates N-acetyltyramine and N-acetyltryptamine to produce tyramine and tryptamine, respectively (PubMed:29247559)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZC4", "ec_number_list": [ { "id": "3.5.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.-", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0019213 deacetylase activity;GO:0051721 protein phosphatase 2A binding;GO:0048487 beta-tubulin binding;GO:0004407 histone deacetylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0040029 epigenetic regulation of gene expression;GO:0090042 tubulin deacetylation;GO:0030186 melatonin metabolic process;GO:0042548 regulation of photosynthesis, light reaction", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q941D6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941L2-1", "uniprot_id": [ { "id": "BAP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q941L2", "type": "external" } ], "mass": 21992.0, "length": 192, "protein_name": "BON1-associated protein 1", "gene_name": "BAP1", "organism": "Arabidopsis", "refseq_name": "BON association protein 1", "refseq_ac": [ { "id": "NP_001190150", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190150", "type": "external" } ], "gene_names_uniprotkb": "BAP1; T20K12.90", "gene_names_refseq": "BAP1; BON association protein 1", "protein_names_uniprotkb": "BON1-associated protein 1", "protein_names_refseq": "BON association protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G61190)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;11544183;11910074;14593172;17018034;17631528;20634289;27862469", "class_list": "", "function": "Negative regulator of cell death and defense responses. Exhibits calcium-dependent phospholipid binding properties., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBT3;Q9M2E5", "ec_number_list": [], "go_molecular_function": "GO:0005543 phospholipid binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0009409 response to cold;GO:0019725 cellular homeostasis;GO:0009266 response to temperature stimulus;GO:0009611 response to wounding", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q941L2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q941L3-1", "uniprot_id": [ { "id": "BON1_ARATH", "url": "https://www.uniprot.org/uniprot/Q941L3", "type": "external" } ], "mass": 63120.0, "length": 578, "protein_name": "Protein BONZAI 1", "gene_name": "BON1", "organism": "Arabidopsis", "refseq_name": "Calcium-dependent phospholipid-binding Copine family protein", "refseq_ac": [ { "id": "NP_568944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568944", "type": "external" } ], "gene_names_uniprotkb": "BON1; CPN1; K22G18.2", "gene_names_refseq": "BON1; BONZAI 1; BON; COPINE 1; CPN1; K22G18.2; K22G18_2", "protein_names_uniprotkb": "Protein BONZAI 1; COPINE 1", "protein_names_refseq": "Calcium-dependent phospholipid-binding Copine family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G61900)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10718197;11544183;11595798;12857819;14593172;15031411;15843967;16367962;17631528;18855102;19522566;20634289;26408532;27862469", "class_list": "", "function": "Negative regulator of cell death and defense responses. Negative regulator of several R genes, including SNC1. May have effects in promoting growth and development. May function in membrane trafficking and in fusion of vesicles with plasma membrane at low temperature. Exhibits calcium-dependent phospholipid binding properties., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 12, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FH53", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0005544 calcium-dependent phospholipid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0009536 plastid", "go_biological_process": "GO:0006952 defense response;GO:0019725 cellular homeostasis;GO:0071277 cellular response to calcium ion;GO:0009266 response to temperature stimulus;GO:0043069 negative regulation of programmed cell death", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q941L3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944A9-1", "uniprot_id": [ { "id": "NPS11_ARATH", "url": "https://www.uniprot.org/uniprot/Q944A9", "type": "external" } ], "mass": 29872.0, "length": 265, "protein_name": "Novel plant SNARE 11", "gene_name": "NPSN11", "organism": "Arabidopsis", "refseq_name": "Putative plant snare 11", "refseq_ac": [ { "id": "NP_565800", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565800", "type": "external" } ], "gene_names_uniprotkb": "NPSN11; T4C15.14", "gene_names_refseq": "ATNPSN11; NPSN11; NSPN11; T4C15.14; T4C15_14; novel plant snare 11", "protein_names_uniprotkb": "Novel plant SNARE 11; AtNPSN11", "protein_names_refseq": "Putative plant snare 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35190)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;12068098;14593172;27862469", "class_list": "", "function": "t-SNARE involved in diverse vesicle trafficking and membrane fusion processes, including cell plate formation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82173", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane;GO:0031902 late endosome membrane;GO:0012507 ER to Golgi transport vesicle membrane", "go_biological_process": "GO:0015031 protein transport;GO:0006906 vesicle fusion;GO:0000911 cytokinesis by cell plate formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q944A9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944G5-1", "uniprot_id": [ { "id": "PTR44_ARATH", "url": "https://www.uniprot.org/uniprot/Q944G5", "type": "external" } ], "mass": 71040.0, "length": 636, "protein_name": "Protein NRT1/ PTR FAMILY 2.10", "gene_name": "NPF2.10", "organism": "Arabidopsis", "refseq_name": "Major facilitator superfamily protein", "refseq_ac": [ { "id": "NP_566896", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566896", "type": "external" } ], "gene_names_uniprotkb": "NPF2.10; GTR1; T17F15.170", "gene_names_refseq": "AtNPF2.10; GLUCOSINOLATE TRANSPORTER-1; GTR1; NPF2.10; NRT1/ PTR family 2.10", "protein_names_uniprotkb": "Protein NRT1/ PTR FAMILY 2.10; AtNPF2.10; Protein GLUCOSINOLATE TRANSPORTER-1", "protein_names_refseq": "Major facilitator superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G47960)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130713;14506206;14593172;15308754;17317660;17481610;17651370;20374526;20501909;22864417;23995084;24055139;25561503;26340317;27862469", "class_list": "", "function": "High-affinity, proton-dependent glucosinolate-specific transporter. Involved in the distribution of glucosinolates within the leaf, including import into the glucosinolate-rich S-cells located adjacent to the phloem. Involved in bidirectional long-distance transport of aliphatic but not indole glucosinolates. May be involved in removal of glucosinolates from the xylem in roots., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94K82;Q9SU59", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0090448 glucosinolate:proton symporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0055085 transmembrane transport;GO:0090449 phloem glucosinolate loading;GO:1901349 glucosinolate transport", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q944G5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944K2-1", "uniprot_id": [ { "id": "OST48_ARATH", "url": "https://www.uniprot.org/uniprot/Q944K2", "type": "external" } ], "mass": 48744.0, "length": 437, "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit", "gene_name": "OST48", "organism": "Arabidopsis", "refseq_name": "dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein", "refseq_ac": [ { "id": "NP_569038", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_569038", "type": "external" } ], "gene_names_uniprotkb": "OST48; DGL1; MSN2.7", "gene_names_refseq": "DEFECTIVE GLYCOSYLATION; DGL1; MSN2.7; MSN2_7", "protein_names_uniprotkb": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Oligosaccharyl transferase 48 kDa subunit; Protein DEFECTIVE GLYCOSYLATION 1", "protein_names_refseq": "dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66680)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10718197;14593172;15860005;22060019;27862469", "class_list": "", "function": "Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation (PubMed:15860005). N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity (By similarity)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LDT6;Q94CD6;Q9LVR2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005730 nucleolus;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0008250 oligosaccharyltransferase complex", "go_biological_process": "GO:0009826 unidimensional cell growth;GO:0009664 plant-type cell wall organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q944K2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944L3-1", "uniprot_id": [ { "id": "IDD9_ARATH", "url": "https://www.uniprot.org/uniprot/Q944L3", "type": "external" } ], "mass": 49941.0, "length": 446, "protein_name": "Zinc finger protein BALDIBIS", "gene_name": "BIB", "organism": "Arabidopsis", "refseq_name": "C2H2-like zinc finger protein", "refseq_ac": [ { "id": "NP_001327332", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327332", "type": "external" } ], "gene_names_uniprotkb": "BIB; F18N11.20; IDD9; IDZ1", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein BALDIBIS; ID1-like zinc finger protein 1; Protein indeterminate-domain 9", "protein_names_refseq": "C2H2-like zinc finger protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G45260)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14593172;16784536;23111157;23172892;24821766;25829440;27862469", "class_list": "", "function": "Transcription factor that, together with JKD, regulates tissue boundaries and asymmetric cell division in roots by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action (PubMed:25829440). Confines CYCD6 expression to the cortex-endodermis initial/daughter (CEI/CEID) tissues (PubMed:25829440). Binds DNA via its zinc fingers (PubMed:24821766). Recognizes and binds to SCL3 promoter sequence 5'-AGACAA-3' to promote its expression when in complex with RGA (PubMed:24821766)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M3F1", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0034504 protein localization to nucleus;GO:0010075 regulation of meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q944L3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944P7-1", "uniprot_id": [ { "id": "AMPL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q944P7", "type": "external" } ], "mass": 61307.0, "length": 583, "protein_name": "Leucine aminopeptidase 2, chloroplastic", "gene_name": "LAP2", "organism": "Arabidopsis", "refseq_name": "Cytosol aminopeptidase family protein", "refseq_ac": [ { "id": "NP_194821", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194821", "type": "external" } ], "gene_names_uniprotkb": "LAP2; F6I18.170", "gene_names_refseq": "AtLAP2; F6I18.170; F6I18_170; LAP2; leucyl aminopeptidase 2", "protein_names_uniprotkb": "Leucine aminopeptidase 2, chloroplastic; 3.4.11.1; 3.4.11.5; AtLAP2; Leucyl aminopeptidase 2; Proline aminopeptidase 2; Prolyl aminopeptidase 2", "protein_names_refseq": "Cytosol aminopeptidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30920)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;22493451;25716890;27862469", "class_list": "", "function": "Functions as a molecular chaperone to protect proteins from heat-induced damage., [UniProtKB, PubMed]; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity). Possesses leucine aminopeptidase activity against the model substrate leucine-amido methyl coumarin (PubMed:22493451). Does not seem to possess Cys-Gly dipeptidase activity (PubMed:25716890)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O65557", "ec_number_list": [], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0030145 manganese ion binding;GO:0004177 aminopeptidase activity;GO:0070006 metalloaminopeptidase activity;GO:0008233 peptidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005773 vacuole;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006508 proteolysis;GO:0034605 cellular response to heat;GO:0010150 leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q944P7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944Q0-1", "uniprot_id": [ { "id": "WNK8_ARATH", "url": "https://www.uniprot.org/uniprot/Q944Q0", "type": "external" } ], "mass": 63803.0, "length": 563, "protein_name": "Serine/threonine-protein kinase WNK8", "gene_name": "WNK8", "organism": "Arabidopsis", "refseq_name": "with no lysine (K) kinase 8", "refseq_ac": [ { "id": "NP_568599", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568599", "type": "external" } ], "gene_names_uniprotkb": "WNK8; MJC20.9", "gene_names_refseq": "ATWNK8; EIP1; EMF1-Interacting Protein 1; MJC20.9; MJC20_9; WNK8; with no lysine (K) kinase 8", "protein_names_uniprotkb": "Serine/threonine-protein kinase WNK8; 2.7.11.1; AtWNK8; Protein kinase with no lysine 8", "protein_names_refseq": "with no lysine (K) kinase 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G41990)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10470850;12506983;14593172;16427632;18761494;20149132;20840782;21952135;22940907;27862469", "class_list": "", "function": "Regulates flowering time by modulating the photoperiod pathway. Phosphorylates the vacuolar ATPase subunit C (VATC) and RGS1 (PubMed:16427632, PubMed:18761494). Regulates EDM2 that, in turn, modulates development processes (PubMed:20149132, PubMed:20840782)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8S8Y7;Q9FHY4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation;GO:0009909 regulation of flower development;GO:0009911 positive regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q944Q0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q945F0-1", "uniprot_id": [ { "id": "DTX47_ARATH", "url": "https://www.uniprot.org/uniprot/Q945F0", "type": "external" } ], "mass": 59528.0, "length": 543, "protein_name": "Protein DETOXIFICATION 47, chloroplastic", "gene_name": "DTX47", "organism": "Arabidopsis", "refseq_name": "MATE efflux family protein", "refseq_ac": [ { "id": "NP_195614", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195614", "type": "external" } ], "gene_names_uniprotkb": "DTX47; EDS5; F19H22.130; IAP1; SCORD3; SID1", "gene_names_refseq": "EDS5; ENHANCED DISEASE SUSCEPTIBILITY 5; F19H22.130; F19H22_130; SALICYLIC ACID INDUCTION DEFICIENT 1; SCORD3; SID1; susceptible to coronatine-deficient Pst DC3000 3", "protein_names_uniprotkb": "Protein DETOXIFICATION 47, chloroplastic; AtDTX47; MATE protein 47; Multidrug and toxic compound extrusion protein 47; Protein EDS5; Protein ENHANCED DISEASE SUSCEPTIBILITY 5; Protein IAP1; Protein IMPORTANT FOR THE ARR PATHWAY 1; Protein SALICYLIC ACID INDUCTION DEFICIENT 1; Protein SCORD3; Protein SID1; Protein SUSCEPTIBLE TO CORONATINE-DEFICIENT PST DC3000 3", "protein_names_refseq": "MATE efflux family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39030)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10449575;10617198;11739388;11826312;11884688;12603313;19694953;21998587;23333976;23757404;24594657;27862469;9090877", "class_list": "", "function": "Functions as a multidrug and toxin extrusion transporter in the export of salicylic acid (SA) from the chloroplast to the cytoplasm (PubMed:23757404). Plays an essential function in plant defense via the pathogen-induced salicylic acid (SA) accumulation (PubMed:11826312, PubMed:24594657). Also acts as a key component of the Age-related resistance (ARR) pathway (PubMed:11884688, PubMed:19694953, PubMed:24594657)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q67ZP3;Q9SVJ0", "ec_number_list": [], "go_molecular_function": "GO:0042910 xenobiotic transmembrane transporter activity;GO:0022857 transmembrane transporter activity;GO:0015297 antiporter activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006952 defense response;GO:0045087 innate immune response;GO:0042742 defense response to bacterium;GO:0009751 response to salicylic acid;GO:0009624 response to nematode", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q945F0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q945K7-1", "uniprot_id": [ { "id": "IDH5_ARATH", "url": "https://www.uniprot.org/uniprot/Q945K7", "type": "external" } ], "mass": 40625.0, "length": 374, "protein_name": "Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial", "gene_name": "IDH5", "organism": "Arabidopsis", "refseq_name": "isocitrate dehydrogenase V", "refseq_ac": [ { "id": "NP_568113", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568113", "type": "external" } ], "gene_names_uniprotkb": "IDH5; F12E4_20; MOK16.20", "gene_names_refseq": "F12E4.20; F12E4_20; IDH-V; isocitrate dehydrogenase V", "protein_names_uniprotkb": "Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; 1.1.1.41; IDH-V; Isocitric dehydrogenase 5; NAD(+)-specific ICDH 5", "protein_names_refseq": "isocitrate dehydrogenase V", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03290)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;14671022;16527867;27862469;9330910", "class_list": "", "function": "Performs an essential role in the oxidative function of the citric acid cycle., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZG1", "ec_number_list": [ { "id": "1.1.1.41", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.41", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0051287 NAD binding;GO:0004449 isocitrate dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0006102 isocitrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q945K7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q945M1-1", "uniprot_id": [ { "id": "NDUB9_ARATH", "url": "https://www.uniprot.org/uniprot/Q945M1", "type": "external" } ], "mass": 13616.0, "length": 117, "protein_name": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9", "gene_name": "CIB22", "organism": "Arabidopsis", "refseq_name": "LYR family of Fe/S cluster biogenesis protein", "refseq_ac": [ { "id": "NP_567970", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567970", "type": "external" } ], "gene_names_uniprotkb": "CIB22; T4L20_280", "gene_names_refseq": "AtCIB22; B22 subunit of eukaryotic mitochondrial Complex I; CIB22; T4L20.280; T4L20_280", "protein_names_uniprotkb": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; AtCIB22; B22 subunit of eukaryotic mitochondrial complex I; CI-B22; Complex I-B22; NADH-ubiquinone oxidoreductase B22 subunit", "protein_names_refseq": "LYR family of Fe/S cluster biogenesis protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34700)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;21035093;22223895;27862469", "class_list": "", "function": "Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). Is required for correct plant growth and development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65692;Q56Z32;Q8LDS9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005886 plasma membrane;GO:0031966 mitochondrial membrane;GO:0045271 respiratory chain complex I", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0006120 mitochondrial electron transport, NADH to ubiquinone;GO:0009853 photorespiration", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q945M1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q945M9-1", "uniprot_id": [ { "id": "NFYA9_ARATH", "url": "https://www.uniprot.org/uniprot/Q945M9", "type": "external" } ], "mass": 33151.0, "length": 303, "protein_name": "Nuclear transcription factor Y subunit A-9", "gene_name": "NFYA9", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "NFYA9; MFD22.2", "gene_names_refseq": "", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit A-9; AtNF-YA-9", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20910)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10907853;11867211;14593172;22074104;25561503;27862469;29654922", "class_list": "", "function": "Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LIH3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription;GO:0009555 pollen development;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q945M9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q945P1-1", "uniprot_id": [ { "id": "EULS3_ARATH", "url": "https://www.uniprot.org/uniprot/Q945P1", "type": "external" } ], "mass": 35648.0, "length": 317, "protein_name": "Ricin B-like lectin EULS3", "gene_name": "EULS3", "organism": "Arabidopsis", "refseq_name": "hydroxyproline-rich glycoprotein family protein", "refseq_ac": [ { "id": "NP_565899", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565899", "type": "external" } ], "gene_names_uniprotkb": "EULS3", "gene_names_refseq": "ArathEULS3; EULS3; Euonymus lectin S3; T7F6.22; T7F6_22", "protein_names_uniprotkb": "Ricin B-like lectin EULS3; AtEULS3; Euonymus lectin S3", "protein_names_refseq": "hydroxyproline-rich glycoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39050)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;19930663;21945438;25238657;26259197;27862469", "class_list": "", "function": "Lectin which binds carbohydrates in vitro. Interacts through its lectin domain with glycan structures containing one or more Lewis X, Lewis Y or lactosamine motifs (PubMed:21945438). May play a role in abiotic stress responses (Probable). May play a role in abscisic acid-induced stomatal closure. May play a role in disease resistance against Pseudomonas syringae through its involvement in stomatal movement (PubMed:26259197)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZV03", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0090332 stomatal closure", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q945P1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q945P8-1", "uniprot_id": [ { "id": "LSM1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q945P8", "type": "external" } ], "mass": 14662.0, "length": 128, "protein_name": "Sm-like protein LSM1A", "gene_name": "LSM1A", "organism": "Arabidopsis", "refseq_name": "Small nuclear ribonucleoprotein family protein", "refseq_ac": [ { "id": "NP_564072", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564072", "type": "external" } ], "gene_names_uniprotkb": "LSM1A; F14D16.28", "gene_names_refseq": "F14D16.28; F14D16_28; LSM1A; SM-like 1A", "protein_names_uniprotkb": "Sm-like protein LSM1A; AtLSM1a", "protein_names_refseq": "Small nuclear ribonucleoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G19120)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;23221597;23620288;27862469", "class_list": "", "function": "Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. LSM1A and LSM1B are essential for the formation of the cytoplasmic LSM1-LSM7 complex which regulates developmental gene expression by the decapping of specific development-related transcripts (PubMed:23221597, PubMed:23620288). Required for P-body formation during heat stress (PubMed:23221597)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LEW7;Q9LMB5", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body;GO:1990904 ribonucleoprotein complex;GO:1990726 Lsm1-7-Pat1 complex", "go_biological_process": "GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA;GO:0006397 mRNA processing;GO:0009631 cold acclimation;GO:0009414 response to water deprivation;GO:0042538 hyperosmotic salinity response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q945P8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q945S5-1", "uniprot_id": [ { "id": "CAX4_ARATH", "url": "https://www.uniprot.org/uniprot/Q945S5", "type": "external" } ], "mass": 48699.0, "length": 446, "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "organism": "Arabidopsis", "refseq_name": "cation exchanger 4", "refseq_ac": [ { "id": "NP_001331104", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331104", "type": "external" } ], "gene_names_uniprotkb": "CAX4; F7A7.10", "gene_names_refseq": "ATCAX4; CAX4; F7A7.10; F7A7_10; cation exchanger 4", "protein_names_uniprotkb": "Vacuolar cation/proton exchanger 4; AtCAX4; Ca(2+)/H(+) antiporter CAX4; Ca(2+)/H(+) exchanger 4; Protein CATION EXCHANGER 4", "protein_names_refseq": "cation exchanger 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01490)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11500563;11950973;16244156;16845524;22060019;27419465;27862469;28011693", "class_list": "", "function": "Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase. Cation selectivity transport in tobacco root tonoplast vesicles is Cd(2+)>Zn(2+)>>Ca(2+)>>>Mn(2+)., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4K9E5;Q9M025", "ec_number_list": [], "go_molecular_function": "GO:0015368 calcium:monoatomic cation antiporter activity;GO:0015369 calcium:proton antiporter activity", "go_cellular_component": "GO:0005774 vacuolar membrane;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0006874 intracellular calcium ion homeostasis;GO:0070588 calcium ion transmembrane transport;GO:0009733 response to auxin;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q945S5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q948R9-1", "uniprot_id": [ { "id": "RFAC3_ARATH", "url": "https://www.uniprot.org/uniprot/Q948R9", "type": "external" } ], "mass": 36276.0, "length": 314, "protein_name": "Protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic", "gene_name": "RFC3", "organism": "Arabidopsis", "refseq_name": "Translation elongation factor EF1B/ribosomal protein S6 family protein", "refseq_ac": [ { "id": "NP_566568", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566568", "type": "external" } ], "gene_names_uniprotkb": "RFC3; K14A17.25", "gene_names_refseq": "REGULATOR OF FATTY-ACID COMPOSITION 3; RFC3", "protein_names_uniprotkb": "Protein REGULATOR OF FATTY ACID COMPOSITION 3, chloroplastic", "protein_names_refseq": "Translation elongation factor EF1B/ribosomal protein S6 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G17170)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10819329;12581310;14593172;27862469;29367414;32143506", "class_list": "", "function": "Prevents non-specific action of the splicing factor CFM3b during plastid rRNA biogenesis to improve the accuracy of plastid rRNA processing (PubMed:32143506). Required for plastid functions such as photosynthesis, intracellular distribution, plastid rRNAs biosynthesis and plastid gene expression in roots (PubMed:29367414, PubMed:32143506). Involved in a sucrose-conditional process important for the organization of root lateral and apical meristems (e.g. establishment of RAM from pericycle and symplasmic connectivity), and subsequent primary and lateral roots development (PubMed:12581310, PubMed:29367414, Ref.6). Modulates C18 unsaturated fatty acid metabolism (Ref.6)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178V657;Q8LE34;Q9LSN0", "ec_number_list": [], "go_molecular_function": "GO:0003746 translation elongation factor activity;GO:0003735 structural constituent of ribosome;GO:0070181 small ribosomal subunit rRNA binding", "go_cellular_component": "GO:0015935 small ribosomal subunit;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0008380 RNA splicing;GO:0010468 regulation of gene expression;GO:0006364 rRNA processing;GO:0010071 root meristem specification;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q948R9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949P2-1", "uniprot_id": [ { "id": "COPDA_ARATH", "url": "https://www.uniprot.org/uniprot/Q949P2", "type": "external" } ], "mass": 79044.0, "length": 701, "protein_name": "Probable cytosolic oligopeptidase A", "gene_name": "CYOP", "organism": "Arabidopsis", "refseq_name": "Zincin-like metalloproteases family protein", "refseq_ac": [ { "id": "NP_568232", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568232", "type": "external" } ], "gene_names_uniprotkb": "CYOP; F12B17.110; TOP2", "gene_names_refseq": "F12B17.110; F12B17_110; TOP2; thimet metalloendopeptidase 2", "protein_names_uniprotkb": "Probable cytosolic oligopeptidase A; 3.4.24.70; Thimet metalloendopeptidase 2; Zincin-like metalloproteases family protein 2", "protein_names_refseq": "Zincin-like metalloproteases family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10540)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130714;14593172;18463617;20466843;22223895;23111157;23572148;23776212;24004003;24043427;24043784;24817709;25561503;27862469;28011693;30833711", "class_list": "", "function": "Oligopeptidase that may be involved in the degradation of proteasome-generated peptides (By similarity). Binds salicylic acid., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LXA6", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0048046 apoplast", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q949P2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949P3-1", "uniprot_id": [ { "id": "D89S2_ARATH", "url": "https://www.uniprot.org/uniprot/Q949P3", "type": "external" } ], "mass": 40858.0, "length": 367, "protein_name": "Damage-control phosphatase At2g17340", "gene_name": "F5J6.10", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F5J6.10", "gene_names_refseq": "", "protein_names_uniprotkb": "Damage-control phosphatase At2g17340; 3.1.3.-; Sugar phosphates phosphatase At2g17340", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17340)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;16511115;22223895;27322068;27862469", "class_list": "", "function": "Metal-dependent phosphatase with probable damage-control functions (PubMed:27322068). Shows phosphatase activity against several substrates, including sugar phosphates and p-nitrophenyl phosphate(pNPP) (PubMed:27322068). Prefers sugar phosphate substrates, including the extremely potent glycating agents ribose-5-phosphate and erythrose-4-phosphate (PubMed:27322068)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XJS9;Q8LCJ8", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0015937 coenzyme A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q949P3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949Q1-1", "uniprot_id": [ { "id": "GAUTB_ARATH", "url": "https://www.uniprot.org/uniprot/Q949Q1", "type": "external" } ], "mass": 61879.0, "length": 537, "protein_name": "Hexosyltransferase GAUT11", "gene_name": "GAUT11", "organism": "Arabidopsis", "refseq_name": "galacturonosyltransferase 11", "refseq_ac": [ { "id": "NP_564057", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564057", "type": "external" } ], "gene_names_uniprotkb": "GAUT11; F25I16.8", "gene_names_refseq": "F25I16.8; F25I16_8; GAUT11; galacturonosyltransferase 11", "protein_names_uniprotkb": "Hexosyltransferase GAUT11; 2.4.1.43; Galacturonosyltransferase 11", "protein_names_refseq": "galacturonosyltransferase 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18580)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;16540543;19825675;27862469;30228108", "class_list": "glycogene;glycosyltransferase", "function": "Glycosyltransferase involved in pectin and/or xylans biosynthesis in cell walls (By similarity). Required for the biosynthesis of pectin in seed coat epidermal (SCE) cells (PubMed:30228108). Collaboratively with MUCI70, essential for the accumulation of seed mucilage, a gelatinous wall rich in unbranched rhamnogalacturonan I (RG I), and for shaping the surface morphology of seeds (PubMed:30228108). Catalyzes homogalacturonan (HG) elongation by acting as an HG alpha-1,4 galacturonic acid transferase (PubMed:30228108)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "A0A178WM53;A0A1W6AJX8;A1A6J4;Q9FZ79", "ec_number_list": [ { "id": "2.4.1.43", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.43", "type": "external" } ], "go_molecular_function": "GO:0016757 glycosyltransferase activity;GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005739 mitochondrion;GO:0005794 Golgi apparatus;GO:0000137 Golgi cis cisterna", "go_biological_process": "GO:0010192 mucilage biosynthetic process;GO:0052546 cell wall pectin metabolic process;GO:0080001 mucilage extrusion from seed coat;GO:0010246 rhamnogalacturonan I biosynthetic process;GO:0010442 guard cell morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q949Q1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949Q5-1", "uniprot_id": [ { "id": "PSAO_ARATH", "url": "https://www.uniprot.org/uniprot/Q949Q5", "type": "external" } ], "mass": 15144.0, "length": 140, "protein_name": "Photosystem I subunit O", "gene_name": "PSAO", "organism": "Arabidopsis", "refseq_name": "photosystem I subunit O", "refseq_ac": [ { "id": "NP_563815", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563815", "type": "external" } ], "gene_names_uniprotkb": "PSAO; T27G7", "gene_names_refseq": "PSAO; PSI-O; T27G7.25; T27G7_25; photosystem I subunit O", "protein_names_uniprotkb": "Photosystem I subunit O; PSI-O", "protein_names_refseq": "photosystem I subunit O", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08380)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11801243;14593172;15169790;27862469", "class_list": "", "function": "Involved in the balancing of excitation energy between the two photosystems I (PSI) and II (PSII)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8L7C3", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I", "go_biological_process": "GO:0009767 photosynthetic electron transport chain;GO:0009768 photosynthesis, light harvesting in photosystem I", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q949Q5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949U1-1", "uniprot_id": [ { "id": "C79F1_ARATH", "url": "https://www.uniprot.org/uniprot/Q949U1", "type": "external" } ], "mass": 61695.0, "length": 538, "protein_name": "Dihomomethionine N-hydroxylase", "gene_name": "CYP79F1", "organism": "Arabidopsis", "refseq_name": "cytochrome p450 79f1", "refseq_ac": [ { "id": "NP_563996", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563996", "type": "external" } ], "gene_names_uniprotkb": "CYP79F1; BUS1; F3O9.21; SPS1", "gene_names_refseq": "BUS1; BUSHY 1; CYP79F1; F3O9.21; F3O9_21; SPS1; SUPERSHOOT 1; cytochrome p450 79f1", "protein_names_uniprotkb": "Dihomomethionine N-hydroxylase; 1.14.14.42; Cytochrome P450 79F1; Protein BUSHY 1; Protein SUPERSHOOT 1; Trihomomethionine N-hydroxylase", "protein_names_refseq": "cytochrome p450 79f1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16410)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11133994;11226190;12529537;12609033;14593172;15194821;17435248;27862469", "class_list": "", "function": "Catalyzes the conversion of the short chain elongated methionines di-, tri-, and tetrahomomethionine to their respective aldoximes 5-methylthiopentanaldoxime, 6-methylthiohexanaldoxime, and 7-methylheptanaldoxime., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5YZH1;A5YZH3;A5YZH4;A5YZH6;A5YZH9;A5YZI0;A5YZI1;A5YZI6;A5YZI9;A5YZJ1;Q3EDB1;Q941N8;Q9SA40", "ec_number_list": [ { "id": "1.14.14.42", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.42", "type": "external" } ], "go_molecular_function": "GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0120526 homomethionine N-monooxygenase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009625 response to insect;GO:0019761 glucosinolate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q949U1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949U7-1", "uniprot_id": [ { "id": "PRX2E_ARATH", "url": "https://www.uniprot.org/uniprot/Q949U7", "type": "external" } ], "mass": 24684.0, "length": 234, "protein_name": "Peroxiredoxin-2E, chloroplastic", "gene_name": "PRXIIE", "organism": "Arabidopsis", "refseq_name": "Thioredoxin superfamily protein", "refseq_ac": [ { "id": "NP_190864", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190864", "type": "external" } ], "gene_names_uniprotkb": "PRXIIE; F8J2_130", "gene_names_refseq": "", "protein_names_uniprotkb": "Peroxiredoxin-2E, chloroplastic; 1.11.1.25; Glutaredoxin-dependent peroxiredoxin; Peroxiredoxin IIE; Thioredoxin peroxidase 2E", "protein_names_refseq": "Thioredoxin superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G52960)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;12913160;14593172;15890615;22092075;25561503;27862469", "class_list": "", "function": "Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides (By similarity). May be involved in chloroplast redox homeostasis (Probable)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LF96", "ec_number_list": [ { "id": "1.11.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.25", "type": "external" } ], "go_molecular_function": "GO:0008379 thioredoxin peroxidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0045454 cell redox homeostasis;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q949U7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949X0-1", "uniprot_id": [ { "id": "ADS3_ARATH", "url": "https://www.uniprot.org/uniprot/Q949X0", "type": "external" } ], "mass": 42580.0, "length": 371, "protein_name": "Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic", "gene_name": "ADS3", "organism": "Arabidopsis", "refseq_name": "fatty acid desaturase 5", "refseq_ac": [ { "id": "NP_566529", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566529", "type": "external" } ], "gene_names_uniprotkb": "ADS3; FAD5; FADB; MSJ11.25", "gene_names_refseq": "ADS3; AtADS3; FAD5; FADB; FATTY ACID DESATURASE B; JB67; fatty acid desaturase 5", "protein_names_uniprotkb": "Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic; 1.14.19.42; Acyl-lipid desaturase 3; FAD5; FADB; Fatty acid desaturase 5; Fatty acid desaturase B; Monogalactosyldiacylglycerol-specific palmitic acid desaturase", "protein_names_refseq": "fatty acid desaturase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G15850)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;14593172;15240892;15579662;16666902;16668849;27862469", "class_list": "", "function": "Fatty acid desaturase involved in the first desaturation step leading to the formation of hexadeca 7,10,13-trienoic acid (16:3(7Z,10Z,13Z)), the major functional components of thylakoid membranes (PubMed:15240892, PubMed:15579662, PubMed:16666902). Required for chloroplast biogenesis at low temperature (PubMed:16668849). Also indirectly involved in the production of the oxylipin dinor-oxo-phyto-dienoic acid implicated in wound signaling (PubMed:15579662)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCQ8;Q9LVZ4", "ec_number_list": [ { "id": "1.14.19.42", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.19.42", "type": "external" } ], "go_molecular_function": "GO:0102843 palmitoyl-[glycerolipid] 7-desaturase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast;GO:0009579 thylakoid;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006636 unsaturated fatty acid biosynthetic process;GO:0042761 very long-chain fatty acid biosynthetic process;GO:0031408 oxylipin biosynthetic process;GO:0010205 photoinhibition", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q949X0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949Y3-1", "uniprot_id": [ { "id": "PPA26_ARATH", "url": "https://www.uniprot.org/uniprot/Q949Y3", "type": "external" } ], "mass": 55010.0, "length": 475, "protein_name": "Bifunctional purple acid phosphatase 26", "gene_name": "PAP26", "organism": "Arabidopsis", "refseq_name": "purple acid phosphatase 26", "refseq_ac": [ { "id": "NP_198334", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198334", "type": "external" } ], "gene_names_uniprotkb": "PAP26; T5E15.10", "gene_names_refseq": "ATPAP26; PAP26; PURPLE ACID PHOSPHATASE 26; T5E15.10; T5E15_10; purple acid phosphatase 26", "protein_names_uniprotkb": "Bifunctional purple acid phosphatase 26", "protein_names_refseq": "purple acid phosphatase 26", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G34850)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;12021284;14593172;16244908;16963519;27862469", "class_list": "", "function": "Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 3, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 3, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 3, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q5MAU9", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003993 acid phosphatase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005773 vacuole;GO:0000325 plant-type vacuole;GO:0009536 plastid", "go_biological_process": "GO:0051174 regulation of phosphorus metabolic process;GO:0042744 hydrogen peroxide catabolic process;GO:0055062 phosphate ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q949Y3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.1000000001000.101.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949Y5-1", "uniprot_id": [ { "id": "EGY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q949Y5", "type": "external" } ], "mass": 59501.0, "length": 548, "protein_name": "Probable zinc metalloprotease EGY1, chloroplastic", "gene_name": "EGY1", "organism": "Arabidopsis", "refseq_name": "Peptidase M50 family protein", "refseq_ac": [ { "id": "NP_198372", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198372", "type": "external" } ], "gene_names_uniprotkb": "EGY1; AMOS1; T25C13.100", "gene_names_refseq": "AMOS1; EGY1; ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1; T25C13.100; T25C13_100; ammonium overly sensitive 1", "protein_names_uniprotkb": "Probable zinc metalloprotease EGY1, chloroplastic; 3.4.24.-; AtEGY1; Protein AMMONIUM OVERLY SENSITIVE 1; Protein ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1", "protein_names_refseq": "Peptidase M50 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35220)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "14593172;15659096;18097640;23064408;25561503;27862469", "class_list": "", "function": "Membrane-associated and ATP-independent metalloprotease required for development of both thylakoid grana and well-organized lamellae in chloroplast. Required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (from both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Involved in the regulation of nuclear gene expression in response to ammonium stress and interacts with ABA signaling. Carries out beta-casein degradation in an ATP-independent manner in vitro., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LHR6", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0009416 response to light stimulus;GO:0060359 response to ammonium ion;GO:0043157 response to cation stress;GO:0009630 gravitropism", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q949Y5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A02-1", "uniprot_id": [ { "id": "TAR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A02", "type": "external" } ], "mass": 50007.0, "length": 440, "protein_name": "Tryptophan aminotransferase-related protein 2", "gene_name": "TAR2", "organism": "Arabidopsis", "refseq_name": "tryptophan aminotransferase related 2", "refseq_ac": [ { "id": "NP_567706", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567706", "type": "external" } ], "gene_names_uniprotkb": "TAR2; F22K18.130", "gene_names_refseq": "F22K18.130; F22K18_130; TAR2; tryptophan aminotransferase related 2", "protein_names_uniprotkb": "Tryptophan aminotransferase-related protein 2; 2.6.1.27; 2.6.1.99", "protein_names_refseq": "tryptophan aminotransferase related 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24670)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;18394996;18394997;22108404;27862469", "class_list": "", "function": "Involved in auxin production. Both TAA1 and TAR2 are required for maintaining proper auxin levels in roots, while TAA1, TAR1 and TAR2 are required for proper embryo patterning. Involved in the maintenance of the root stem cell niches., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SB62", "ec_number_list": [ { "id": "2.6.1.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.27", "type": "external" }, { "id": "2.6.1.99", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.99", "type": "external" }, { "id": "2.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.5", "type": "external" }, { "id": "2.6.1.88", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.88", "type": "external" } ], "go_molecular_function": "GO:0008483 transaminase activity;GO:0016846 carbon-sulfur lyase activity;GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity;GO:0080097 L-tryptophan:pyruvate aminotransferase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0006520 amino acid metabolic process;GO:0010087 phloem or xylem histogenesis;GO:0009684 indoleacetic acid biosynthetic process;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q94A02-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A03-1", "uniprot_id": [ { "id": "CDS4_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A03", "type": "external" } ], "mass": 42159.0, "length": 391, "protein_name": "Phosphatidate cytidylyltransferase 4, chloroplastic", "gene_name": "CDS4", "organism": "Arabidopsis", "refseq_name": "cytidinediphosphate diacylglycerol synthase 4", "refseq_ac": [ { "id": "NP_566035", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566035", "type": "external" } ], "gene_names_uniprotkb": "CDS4; T14P1.4", "gene_names_refseq": "CDS4; T14P1.4; cytidinediphosphate diacylglycerol synthase 4", "protein_names_uniprotkb": "Phosphatidate cytidylyltransferase 4, chloroplastic; 2.7.7.41; CDP-DAG synthase 4; CDP-DG synthase 4; CDP-diacylglycerol synthase 4; CDP-diglyceride pyrophosphorylase 4; CDP-diglyceride synthase 4; CDS4; CTP:phosphatidate cytidylyltransferase 4", "protein_names_refseq": "cytidinediphosphate diacylglycerol synthase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G45150)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;14993207;19423640;20442275;27862469", "class_list": "", "function": "May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Promotes the biosynthesis of plastidial phosphatidylglycerol (PG) which is required for structure and function of thylakoid membranes and, hence, for photoautotrophic growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IW27;F4IW28;Q0V7V3", "ec_number_list": [ { "id": "2.7.7.41", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.41", "type": "external" } ], "go_molecular_function": "GO:0004605 phosphatidate cytidylyltransferase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006655 phosphatidylglycerol biosynthetic process;GO:0016024 CDP-diacylglycerol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q94A03-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A28-1", "uniprot_id": [ { "id": "ACO2M_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A28", "type": "external" } ], "mass": 108481.0, "length": 995, "protein_name": "Aconitate hydratase 2, mitochondrial", "gene_name": "ACO2", "organism": "Arabidopsis", "refseq_name": "aconitase 2", "refseq_ac": [ { "id": "NP_567763", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567763", "type": "external" } ], "gene_names_uniprotkb": "ACO2; F10M23.310", "gene_names_refseq": "ACO2; F10M23.310; F10M23_310; aconitase 2", "protein_names_uniprotkb": "Aconitate hydratase 2, mitochondrial; 4.2.1.3; Aconitase 2; Citrate hydro-lyase 2; mACO2", "protein_names_refseq": "aconitase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26970)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;14593172;14671022;17013749;17437406;23111157;23820729;24296071;25061985;25561503;27862469;28011693", "class_list": "", "function": "Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Contributes to oxidative stress tolerance (PubMed:17013749). Involved in acetate assimilation (PubMed:25061985)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZ36", "ec_number_list": [ { "id": "4.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0003994 aconitate hydratase activity;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0030350 iron-responsive element binding;GO:0005507 copper ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0006101 citrate metabolic process;GO:0006102 isocitrate metabolic process;GO:0006979 response to oxidative stress;GO:0006097 glyoxylate cycle", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q94A28-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A41-1", "uniprot_id": [ { "id": "AMY3_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A41", "type": "external" } ], "mass": 99842.0, "length": 887, "protein_name": "Alpha-amylase 3, chloroplastic", "gene_name": "AMY3", "organism": "Arabidopsis", "refseq_name": "alpha-amylase-like 3", "refseq_ac": [ { "id": "NP_564977", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564977", "type": "external" } ], "gene_names_uniprotkb": "AMY3; T17F3.14", "gene_names_refseq": "ALPHA-AMYLASE-LIKE 3; AMY3; ATAMY3; T17F3.14; T17F3_14; alpha-amylase-like 3", "protein_names_uniprotkb": "Alpha-amylase 3, chloroplastic; 1,4-alpha-D-glucan glucanohydrolase; 3.2.1.1; AtAMY3", "protein_names_refseq": "alpha-amylase-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69830)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;14593172;15347792;15637061;15927942;19074683;19141707;20466843;21294843;22074104;24089528;27436713;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Possesses endoamylolytic activity in vitro, but seems not required for breakdown of transitory starch in leaves. May be involved in the determination of the final structure of glucans by shortening long linear phospho-oligosaccharides in the chloroplast stroma. Can act on both soluble and insoluble glucan substrates to release small linear and branched malto-oligosaccharides (PubMed:24089528). Works synergistically with beta-amylase toward efficient starch degradation (PubMed:24089528). Has activity against p-nitrophenyl maltoheptaoside (BPNP-G7), amylopectin and beta-limit dextrin (PubMed:24089528). Involved in stress-induced starch degradation (PubMed:27436713)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAR6", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0004556 alpha-amylase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0005983 starch catabolic process;GO:0005987 sucrose catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q94A41-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A52-1", "uniprot_id": [ { "id": "RH2_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A52", "type": "external" } ], "mass": 45845.0, "length": 408, "protein_name": "Eukaryotic initiation factor 4A-III homolog", "gene_name": "EIF4A3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "EIF4A3; MMB12.25; MMB12.4; RH2", "gene_names_refseq": "", "protein_names_uniprotkb": "Eukaryotic initiation factor 4A-III homolog; 3.6.4.13; AtRH02; AteIF4AIII; DEAD-box ATP-dependent RNA helicase 2; eIF-4A-III; eIF4A-III", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19760)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10907853;14593172;17168887;19435936;23820729;24265739;24743583;26867216;26883227;26887918;27862469;30833711;9862990", "class_list": "", "function": "(Microbial infection) Functions as a host RNA helicase that is co-opted by the tombusvirus (TBSV) RNA replication enhancer to greatly enhance tombusvirus replication. Interacts with the viral minus-strand RNA and the replication proteins within the viral replicase., [UniProtKB, PubMed]; ATP-dependent RNA helicase. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Its RNA-dependent ATPase and RNA-helicase activities are induced by MLN51/CASC3, but abolished in presence of the MAGO-Y14 heterodimer, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The inhibition of ATPase activity by the MAGO-Y14 heterodimer increases the RNA-binding affinity of the EJC (By similarity). Plays a role in abiotic stress adaptation. Can regulate abiotic stress resistance partially via the control of acetoacetyl-CoA thiolase 2 (AC Q8S4Y1) expression (PubMed:26883227)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZS14", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005829 cytosol;GO:0016607 nuclear speck", "go_biological_process": "GO:0006417 regulation of translation;GO:0001666 response to hypoxia;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0000398 mRNA splicing, via spliceosome;GO:0051028 mRNA transport", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q94A52-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A57-1", "uniprot_id": [ { "id": "PHL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A57", "type": "external" } ], "mass": 32205.0, "length": 295, "protein_name": "Protein PHR1-LIKE 2", "gene_name": "PHL2", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": [ { "id": "NP_566744", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566744", "type": "external" } ], "gene_names_uniprotkb": "PHL2; MUJ8.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein PHR1-LIKE 2; Myb family transcription factor PHL2", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24120)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10819329;11511543;14593172;24309816;26586833;27862469", "class_list": "", "function": "Transcriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4J5D9;Q9LRN5", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression;GO:0006355 regulation of DNA-templated transcription;GO:0010468 regulation of gene expression;GO:0016036 cellular response to phosphate starvation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q94A57-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A82-1", "uniprot_id": [ { "id": "NUD19_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A82", "type": "external" } ], "mass": 48347.0, "length": 438, "protein_name": "Nudix hydrolase 19, chloroplastic", "gene_name": "NUDT19", "organism": "Arabidopsis", "refseq_name": "nudix hydrolase homolog 19", "refseq_ac": [ { "id": "NP_197507", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197507", "type": "external" } ], "gene_names_uniprotkb": "NUDT19; F28I16.220; NUDX19", "gene_names_refseq": "ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19; ATNUDT19; ATNUDX19; F28I16.220; F28I16_220; NUDX19; nudix hydrolase homolog 19", "protein_names_uniprotkb": "Nudix hydrolase 19, chloroplastic; 3.6.1.-; 3.6.1.22; AtNUDT19; DeNADding enzyme NUDT19; NAD-capped RNA hydrolase NUDT19; NADH pyrophosphatase NUDT19", "protein_names_refseq": "nudix hydrolase homolog 19", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20070)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;15878881;18815383;21768351;27862469", "class_list": "", "function": "mRNA decapping enzyme that specifically removes the nicotinamide adenine dinucleotide (NAD) cap from a subset of mRNAs by hydrolyzing the diphosphate linkage to produce nicotinamide mononucleotide (NMN) and 5' monophosphate mRNA. The NAD-cap is present at the 5'-end of some RNAs; in contrast to the canonical N7 methylguanosine (m7G) cap, the NAD cap promotes mRNA decay (By similarity). Mediates the hydrolysis of some nucleoside diphosphate derivatives. Has a high affinity for NADPH compared with that for NADH (PubMed:18815383)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WV54;Q0WVK5", "ec_number_list": [ { "id": "3.6.1.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.22", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.13", "type": "external" }, { "id": "3.6.1.55", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.55", "type": "external" }, { "id": "3.6.1.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.67", "type": "external" } ], "go_molecular_function": "GO:0000210 NAD+ diphosphatase activity;GO:0046872 metal ion binding;GO:0035529 NADH pyrophosphatase activity;GO:0110153 RNA NAD-cap (NMN-forming) hydrolase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0009507 chloroplast", "go_biological_process": "GO:0019677 NAD+ catabolic process;GO:0006742 NADP+ catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q94A82-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A84-1", "uniprot_id": [ { "id": "U72E1_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A84", "type": "external" } ], "mass": 53363.0, "length": 487, "protein_name": "UDP-glycosyltransferase 72E1", "gene_name": "UGT72E1", "organism": "Arabidopsis", "refseq_name": "UDP-glucosyl transferase 72E1", "refseq_ac": [ { "id": "NP_566938", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566938", "type": "external" } ], "gene_names_uniprotkb": "UGT72E1; F18B3.20", "gene_names_refseq": "F18B3.20; UDP-glucosyl transferase 72E1; UGT72E1", "protein_names_uniprotkb": "UDP-glycosyltransferase 72E1; 2.4.1.-", "protein_names_refseq": "UDP-glucosyl transferase 72E1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50740)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11042215;11130713;15907484;16995900;24320620;24905498;27862469", "class_list": "glycogene;glycosyltransferase", "function": "UDP-glycosyltransferase that glucosylates coniferyl aldehyde to form coniferyl aldehyde 4-O-glucoside (PubMed:15907484). Glucosylates sinapyl aldehyde to form sinapyl aldehyde 4-O-glucoside (PubMed:15907484). Is not active in presence of coniferyl alcohol or sinapyl alcohol (PubMed:15907484). Can glucosylate the phytotoxic xenobiotic compound 2,4,5-trichlorophenol (TCP) (PubMed:15907484)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9S7R8;W8Q6P4", "ec_number_list": [ { "id": "2.4.1.111", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.111", "type": "external" }, { "id": "2.4.1.126", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.126", "type": "external" }, { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0047209 coniferyl-alcohol glucosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0009636 response to toxic substance;GO:0009808 lignin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q94A84-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AA4-1", "uniprot_id": [ { "id": "PFKA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AA4", "type": "external" } ], "mass": 53666.0, "length": 489, "protein_name": "ATP-dependent 6-phosphofructokinase 3", "gene_name": "PFK3", "organism": "Arabidopsis", "refseq_name": "phosphofructokinase 3", "refseq_ac": [ { "id": "NP_567742", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567742", "type": "external" } ], "gene_names_uniprotkb": "PFK3; T25K17.80", "gene_names_refseq": "PFK3; T25K17.80; T25K17_80; phosphofructokinase 3", "protein_names_uniprotkb": "ATP-dependent 6-phosphofructokinase 3; 2.7.1.11; ATP-PFK 3; Phosphofructokinase 3; Phosphohexokinase 3", "protein_names_refseq": "phosphofructokinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26270)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;14593172;17485088;27862469", "class_list": "", "function": "Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STQ7", "ec_number_list": [ { "id": "2.7.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.11", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0003872 6-phosphofructokinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0071456 cellular response to hypoxia;GO:0006096 glycolytic process;GO:0006002 fructose 6-phosphate metabolic process;GO:0010053 root epidermal cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q94AA4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AA9-1", "uniprot_id": [ { "id": "XGD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AA9", "type": "external" } ], "mass": 56600.0, "length": 500, "protein_name": "Xylogalacturonan beta-1,3-xylosyltransferase", "gene_name": "XGD1", "organism": "Arabidopsis", "refseq_name": "xylogalacturonan deficient 1", "refseq_ac": [ { "id": "NP_198314", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198314", "type": "external" } ], "gene_names_uniprotkb": "XGD1; F19N2.10", "gene_names_refseq": "F19N2.10; F19N2_10; XGD1; xylogalacturonan deficient 1", "protein_names_uniprotkb": "Xylogalacturonan beta-1,3-xylosyltransferase; 2.4.2.41; Protein XYLOGALACTURONAN DEFICIENT 1", "protein_names_refseq": "xylogalacturonan deficient 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G33290)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;14993207;18460606;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Involved in pectin biosynthesis. Catalyzes the transfer of xylose from UDP-xylose onto oligogalacturonides and endogenous acceptors., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035252 UDP-xylosyltransferase activity;GO:0102983 xylogalacturonan beta-1,3-xylosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network;GO:0009507 chloroplast", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0071555 cell wall organization;GO:0045489 pectin biosynthetic process;GO:0010398 xylogalacturonan metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q94AA9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AC8-1", "uniprot_id": [ { "id": "GNAT7_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AC8", "type": "external" } ], "mass": 30417.0, "length": 274, "protein_name": "GCN5-related N-acetyltransferase 7, chloroplastic", "gene_name": "GNAT7", "organism": "Arabidopsis", "refseq_name": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "refseq_ac": [ { "id": "NP_001031734", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031734", "type": "external" } ], "gene_names_uniprotkb": "GNAT7; T13J8.140", "gene_names_refseq": "T13J8.140; T13J8_140", "protein_names_uniprotkb": "GCN5-related N-acetyltransferase 7, chloroplastic; 2.3.1.255; 2.3.1.48", "protein_names_refseq": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28030)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;19423640;25561503;27862469;32633465", "class_list": "", "function": "Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA), with a large spectrum of modified N-termini, including methionine, alanine, serine, threonine and to a lower extent valine and proline as substrates, and epsilon-lysine acetylation (KA)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG63;Q8LFP5;Q9SUD6", "ec_number_list": [ { "id": "2.3.1.48", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.48", "type": "external" }, { "id": "2.3.1.87", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.87", "type": "external" }, { "id": "2.3.1.255", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.255", "type": "external" }, { "id": "2.3.1.259", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.259", "type": "external" } ], "go_molecular_function": "GO:0061733 protein-lysine-acetyltransferase activity;GO:0008080 N-acetyltransferase activity;GO:0004596 protein-N-terminal amino-acid acetyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0018394 peptidyl-lysine acetylation;GO:0006474 N-terminal protein amino acid acetylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q94AC8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AF2-1", "uniprot_id": [ { "id": "NNRD_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AF2", "type": "external" } ], "mass": 39269.0, "length": 365, "protein_name": "ATP-dependent (S)-NAD(P)H-hydrate dehydratase", "gene_name": "T24G5", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T24G5", "gene_names_refseq": "", "protein_names_uniprotkb": "ATP-dependent (S)-NAD(P)H-hydrate dehydratase; 4.2.1.93; ATP-dependent NAD(P)HX dehydratase", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19150)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14593172;22223895;25561503;27862469", "class_list": "", "function": "Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "4.2.1.93", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.93", "type": "external" } ], "go_molecular_function": "GO:0047453 ATP-dependent NAD(P)H-hydrate dehydratase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006739 NADP+ metabolic process;GO:0019674 NAD+ metabolic process;GO:0110051 metabolite repair", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q94AF2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94C33-1", "uniprot_id": [ { "id": "C3H45_ARATH", "url": "https://www.uniprot.org/uniprot/Q94C33", "type": "external" } ], "mass": 57370.0, "length": 521, "protein_name": "Zinc finger CCCH domain-containing protein 45", "gene_name": "F24M12.220", "organism": "Arabidopsis", "refseq_name": "Zinc finger C-x8-C-x5-C-x3-H type family protein", "refseq_ac": [ { "id": "NP_566947", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566947", "type": "external" } ], "gene_names_uniprotkb": "F24M12.220", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger CCCH domain-containing protein 45; AtC3H45", "protein_names_refseq": "Zinc finger C-x8-C-x5-C-x3-H type family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51180)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;18221561;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SD28", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q94C33-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q96290-1", "uniprot_id": [ { "id": "MSSP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q96290", "type": "external" } ], "mass": 79485.0, "length": 734, "protein_name": "Monosaccharide-sensing protein 1", "gene_name": "MSSP1", "organism": "Arabidopsis", "refseq_name": "tonoplast monosaccharide transporter1", "refseq_ac": [ { "id": "NP_001319055", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319055", "type": "external" } ], "gene_names_uniprotkb": "MSSP1; F2D10.36; F9H16.18; MT1; TMT1", "gene_names_refseq": "AtTMT1; F9H16.18; F9H16_18; TMT1; tonoplast monosaccharide transporter1", "protein_names_uniprotkb": "Monosaccharide-sensing protein 1; AtTMT1; Monosaccharide transporter 1; Sugar transporter MSSP1; Sugar transporter MT1; Tonoplast monosaccharide transporter 1", "protein_names_refseq": "tonoplast monosaccharide transporter1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20840)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;16923188;17158605;17307167;18686298;19245862;19376835;20709831;21668536;21768351;21838775;23111157;23328941;25561503;26091701;27419465;27862469;29654922", "class_list": "", "function": "Sugar proton-coupled antiporter which contributes to vacuolar sugar import (e.g. monosaccharides including glucose, sucrose and fructose), particularly during stress responses (e.g. in response to cold) (PubMed:17158605, PubMed:20709831, PubMed:21668536). Required for cytosolic glucose homeostasis (PubMed:17158605, PubMed:20709831)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 16, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LM67;Q9SYQ3", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0019900 kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane;GO:0000325 plant-type vacuole;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0009409 response to cold;GO:0055085 transmembrane transport;GO:0009749 response to glucose;GO:0009414 response to water deprivation;GO:0009744 response to sucrose", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q96290-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ATB4-1", "uniprot_id": [ { "id": "TAD2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ATB4", "type": "external" } ], "mass": 56186.0, "length": 487, "protein_name": "Transcriptional adapter ADA2b", "gene_name": "ADA2B", "organism": "Arabidopsis", "refseq_name": "ADA2 2B", "refseq_ac": [ { "id": "NP_567495", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567495", "type": "external" } ], "gene_names_uniprotkb": "ADA2B; PRZ1; dl4235c", "gene_names_refseq": "ADA2B; DL4235C; FCAALL.57; PROPORZ1; PRZ1; homolog of yeast ADA2 2B", "protein_names_uniprotkb": "Transcriptional adapter ADA2b; AtADA2b; Protein PROPORZ 1", "protein_names_refseq": "ADA2 2B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16420)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;11266554;12615937;12747832;14593172;14993207;16603259;21193996;23572148;24861440;25561503;27862469;9461215", "class_list": "", "function": "Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region. Mediates auxin and cytokinin signals in the control of cell proliferation and might be involved in repression of a freezing tolerance pathway at warm temperature (PubMed:12615937, PubMed:12747832). Involved in the positive regulation of salt-induced gene expression by maintaining locus-specific acetylation of histones H4 and H3 (PubMed:21193996)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23486;Q3EA06;Q3EA07", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003713 transcription coactivator activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0042127 regulation of cell population proliferation;GO:0009631 cold acclimation", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9ATB4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C4Z6-1", "uniprot_id": [ { "id": "GPLPB_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C4Z6", "type": "external" } ], "mass": 35801.0, "length": 326, "protein_name": "Small ribosomal subunit protein RACK1y", "gene_name": "RACK1B", "organism": "Arabidopsis", "refseq_name": "receptor for activated C kinase 1B", "refseq_ac": [ { "id": "NP_175296", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175296", "type": "external" } ], "gene_names_uniprotkb": "RACK1B; F11I4.18; F9P7.2", "gene_names_refseq": "F11I4.18; F11I4_18; RACK1B_AT; RACK1B; receptor for activated C kinase 1B", "protein_names_uniprotkb": "Small ribosomal subunit protein RACK1y; Guanine nucleotide-binding protein subunit beta-like protein B; Receptor for activated C kinase 1B", "protein_names_refseq": "receptor for activated C kinase 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G48630)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;16829549;18947417;25731164;27862469;36423343;8281187", "class_list": "", "function": "Minor component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes (PubMed:18947417). MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway (PubMed:25731164)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42130;Q8LAF2", "ec_number_list": [], "go_molecular_function": "GO:0005080 protein kinase C binding;GO:0043022 ribosome binding;GO:0005078 MAP-kinase scaffold activity;GO:0045182 translation regulator activity;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0022626 cytosolic ribosome;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0072344 rescue of stalled ribosome;GO:0006417 regulation of translation;GO:0042254 ribosome biogenesis;GO:0042742 defense response to bacterium;GO:0009967 positive regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9C4Z6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C5A5-1", "uniprot_id": [ { "id": "Q9C5A5_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C5A5", "type": "external" } ], "mass": 81922.0, "length": 719, "protein_name": "Polyketide cyclase/dehydrase/lipid transporter", "gene_name": "HCF145", "organism": "Arabidopsis", "refseq_name": "polyketide cyclase/dehydrase/lipid transporter", "refseq_ac": [ { "id": "NP_680157", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680157", "type": "external" } ], "gene_names_uniprotkb": "HCF145", "gene_names_refseq": "", "protein_names_uniprotkb": "Polyketide cyclase/dehydrase/lipid transporter", "protein_names_refseq": "polyketide cyclase/dehydrase/lipid transporter", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08720)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130714;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0048027 mRNA 5'-UTR binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0031426 polycistronic mRNA processing;GO:0010239 chloroplast mRNA processing;GO:0042548 regulation of photosynthesis, light reaction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9C5A5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C5Z3-1", "uniprot_id": [ { "id": "EIF3E_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C5Z3", "type": "external" } ], "mass": 51750.0, "length": 441, "protein_name": "Eukaryotic translation initiation factor 3 subunit E", "gene_name": "TIF3E1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "TIF3E1; F28O9.140; INT6", "gene_names_refseq": "", "protein_names_uniprotkb": "Eukaryotic translation initiation factor 3 subunit E; AtEIF3E-1; AtINT6; Eukaryotic translation initiation factor 3 subunit 6; INT-6; eIF3e; p48", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57290)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11029466;11042177;11130713;14593172;15548739;16679540;18067529;19704582;20444226;27862469", "class_list": "", "function": "Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (Potential). Negatively regulates translation during flower development (PubMed:18067529, PubMed:20444226)., [UniProtKB, PubMed, PubMed, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2L8;Q9M4T7", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0030371 translation repressor activity;GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0031597 cytosolic proteasome complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0006413 translational initiation;GO:0006412 translation;GO:0006352 DNA-templated transcription initiation;GO:0001732 formation of cytoplasmic translation initiation complex;GO:0009640 photomorphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9C5Z3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C639-1", "uniprot_id": [ { "id": "LHCA5_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C639", "type": "external" } ], "mass": 27802.0, "length": 256, "protein_name": "Photosystem I chlorophyll a/b-binding protein 5, chloroplastic", "gene_name": "LHCA5", "organism": "Arabidopsis", "refseq_name": "photosystem I light harvesting complex protein 5", "refseq_ac": [ { "id": "NP_175137", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175137", "type": "external" } ], "gene_names_uniprotkb": "LHCA5; F2G19.4", "gene_names_refseq": "F2G19.4; F2G19_4; Lhca5; photosystem I light harvesting complex gene 5", "protein_names_uniprotkb": "Photosystem I chlorophyll a/b-binding protein 5, chloroplastic; LHCI type III LHCA5; Lhca5", "protein_names_refseq": "photosystem I light harvesting complex protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G45474)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10366881;11130712;12324436;14593172;15356385;15563470;17107674;19139095;19423640;19903870;21278308;21785130;21806943;22223895;27862469", "class_list": "", "function": "The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (PubMed:15563470, PubMed:21806943). Seems involved in the function of the photosystem I in low light conditions, when other LHCA proteins are less abundant (PubMed:15356385). Required, together with LHCA6, for the formation of a full-size NAD(P)H dehydrogenase-photosystem I supercomplex (NDH-PSI) that triggers cyclic and chlororespiratory electron transport in chloroplast thylakoids, especially under stress conditions (e.g. increased light intensity) (Probable) (PubMed:19903870, PubMed:21278308)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B9DFW4;Q8L9Y7;Q9XF85", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0046872 metal ion binding;GO:0031409 pigment binding;GO:0016168 chlorophyll binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009782 photosystem I antenna complex", "go_biological_process": "GO:0009645 response to low light intensity stimulus;GO:0009409 response to cold;GO:0009416 response to light stimulus;GO:0009644 response to high light intensity;GO:0009768 photosynthesis, light harvesting in photosystem I", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9C639-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C7F7-1", "uniprot_id": [ { "id": "LTPG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C7F7", "type": "external" } ], "mass": 19759.0, "length": 193, "protein_name": "Non-specific lipid transfer protein GPI-anchored 1", "gene_name": "LTPG1", "organism": "Arabidopsis", "refseq_name": "glycosylphosphatidylinositol-anchored lipid protein transfer 1", "refseq_ac": [ { "id": "NP_174116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174116", "type": "external" } ], "gene_names_uniprotkb": "LTPG1; F13K9.6; LTPG", "gene_names_refseq": "F13K9.6; F13K9_6; LTPG1; glycosylphosphatidylinositol-anchored lipid protein transfer 1", "protein_names_uniprotkb": "Non-specific lipid transfer protein GPI-anchored 1; AtLTPG-1; Protein LTP-GPI-ANCHORED 1", "protein_names_refseq": "glycosylphosphatidylinositol-anchored lipid protein transfer 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27950)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;14593172;16299169;19321705;19366900;22891199;23505340;23893219;24460633;27862469;30102837", "class_list": "", "function": "Lipid transfer protein that, together with LTPG2, binds to lipids and functions as a component of the cuticular lipid export machinery that performs extensive export of intracellular lipids (e.g. C29 alkane) from epidermal cells to the surface to build the cuticular wax layer and silique walls. Involved in the establishment of resistance to the necrotrophic fungal pathogen Alternaria brassicicola. Contributes to pre-invasive defense against some non-host powdery mildew pathogens by preventing the penetration of the epidermal cell wall by the fungal agents (e.g. Blumeria graminis f. sp. hordei (Bgh)) (PubMed:30102837). Maybe involved in seed and ovule maturation and development, probably by regulating the fatty acids homeostasis during suberin and sporopollenin biosynthesis or deposition (By similarity)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 2, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q570M7;Q8LEI0", "ec_number_list": [], "go_molecular_function": "GO:0008289 lipid binding", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:0042335 cuticle development;GO:0006869 lipid transport;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q9C7F7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C8Z9-1", "uniprot_id": [ { "id": "BH148_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C8Z9", "type": "external" } ], "mass": 24256.0, "length": 221, "protein_name": "Transcription factor bHLH148", "gene_name": "BHLH148", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_001325894", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325894", "type": "external" } ], "gene_names_uniprotkb": "BHLH148; AIF2; EN143; F5E6.8; RITF1", "gene_names_refseq": "AIF2; ATBS1 Interacting Factor 2; F5E6.8; F5E6_8; RITF1; RSA1 interacting transcription factor 1", "protein_names_uniprotkb": "Transcription factor bHLH148; ATBS1 interacting factor 2; AtRITF1; AtbHLH148; Basic helix-loop-helix protein 148; Protein RSA1 INTERACTING TRANSCRIPTION FACTOR 1; Transcription factor EN 143; bHLH 148; bHLH transcription factor bHLH148", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06590)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;12897250;14593172;14600211;20023194;24009530;27862469", "class_list": "", "function": "bHLH transcription factor that binds DNA on specific sequence 5'-CANNTG-3' in target gene promoters (PubMed:24009530). Negatively regulates brassinosteroid signaling (PubMed:20023194). Together with BHLH148/RITF1, regulates the transcription of several genes involved in the detoxification of reactive oxygen species (ROS) generated by salt (NaCl) stress. Confers tolerance to salt and to the oxidative stress-inducing reagents hydrogen peroxide H(2)O(2) and methyl viologen (MV) (PubMed:24009530)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SVA2;Q8L8X9", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006979 response to oxidative stress;GO:0006355 regulation of DNA-templated transcription;GO:0042542 response to hydrogen peroxide;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9C8Z9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C9L0-1", "uniprot_id": [ { "id": "CUL3B_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C9L0", "type": "external" } ], "mass": 85610.0, "length": 732, "protein_name": "Cullin-3B", "gene_name": "CUL3B", "organism": "Arabidopsis", "refseq_name": "cullin 3B", "refseq_ac": [ { "id": "NP_001319357", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319357", "type": "external" } ], "gene_names_uniprotkb": "CUL3B; T6C23.13", "gene_names_refseq": "ARABIDOPSIS THALIANA CULLIN 3B; ATCUL3B; CUL3B; T6C23.13; T6C23_13; cullin 3B", "protein_names_uniprotkb": "Cullin-3B; AtCUL3b", "protein_names_refseq": "cullin 3B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69670)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;15618422;15659098;15749712;15772280;16045478;19132085;27862469", "class_list": "", "function": "Component of the cullin-RING ubiquitin ligases (CRL), or CUL3-RBX1-BTB protein E3 ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the CRL complex depends on the BTB domain-containing protein as the substrate recognition component. Involved in embryo pattern formation and endosperm development. Required for the normal division and organization of the root stem cells and columella root cap cells. Regulates primary root growth by an unknown pathway, but in an ethylene-dependent manner. Functions in distal root patterning, by an ethylene-independent mechanism. Functionally redundant with CUL3A., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q711G4", "ec_number_list": [], "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0160072 ubiquitin ligase complex scaffold activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000151 ubiquitin ligase complex;GO:0031461 cullin-RING ubiquitin ligase complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9C9L0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CAF4-1", "uniprot_id": [ { "id": "NUP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CAF4", "type": "external" } ], "mass": 135933.0, "length": 1309, "protein_name": "Nuclear pore complex protein NUP1", "gene_name": "NUP1", "organism": "Arabidopsis", "refseq_name": "nuclear pore complex protein", "refseq_ac": [ { "id": "NP_001327263", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327263", "type": "external" } ], "gene_names_uniprotkb": "NUP1; F13M14.6; F18K10.27; NUP136", "gene_names_refseq": "AtNUP1; NUP1", "protein_names_uniprotkb": "Nuclear pore complex protein NUP1; Nuclear pore complex protein NUP136; Nucleoporin 136; Nucleoporin 1", "protein_names_refseq": "nuclear pore complex protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10650)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130713;14593172;19843313;21189294;21818409;22951400;23111157;23776212;25081480;25561503;27862469;28011693;28154133;30833711", "class_list": "", "function": "Nucleoporin required for nuclear mRNA export. Functions as an adapter and/or regulator molecule in the periphery of the nuclear pore complex (NPC). May interact with importin proteins and mediate active nucleocytoplasmic transport through the NPC. Involved in regulation of nuclear morphology., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9LPN4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005643 nuclear pore;GO:0005829 cytosol;GO:0034399 nuclear periphery", "go_biological_process": "GO:0016973 poly(A)+ mRNA export from nucleus;GO:0015031 protein transport;GO:0006997 nucleus organization;GO:0071763 nuclear membrane organization", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q9CAF4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CAI7-1", "uniprot_id": [ { "id": "IF4A3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CAI7", "type": "external" } ], "mass": 46771.0, "length": 414, "protein_name": "Eukaryotic initiation factor 4A-3", "gene_name": "TIF4A-3", "organism": "Arabidopsis", "refseq_name": "DEA(D/H)-box RNA helicase family protein", "refseq_ac": [ { "id": "NP_177417", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177417", "type": "external" } ], "gene_names_uniprotkb": "TIF4A-3; F28P22.8; RH23", "gene_names_refseq": "F28P22.8; F28P22_8", "protein_names_uniprotkb": "Eukaryotic initiation factor 4A-3; 3.6.4.13; ATP-dependent RNA helicase eIF4A-3; DEAD-box ATP-dependent RNA helicase 23; eIF-4A-3", "protein_names_refseq": "DEA(D/H)-box RNA helicase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72730)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;14593172;17168887;18433157;21768351;22223895;23111157;23328941;24265739;25561503;27862469;28011693;30833711;9862990", "class_list": "", "function": "ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZS01", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003743 translation initiation factor activity;GO:0003724 RNA helicase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0010494 cytoplasmic stress granule;GO:0000325 plant-type vacuole;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0002183 cytoplasmic translational initiation", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q9CAI7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CAV7-1", "uniprot_id": [ { "id": "STKLJ_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CAV7", "type": "external" } ], "mass": 49707.0, "length": 456, "protein_name": "Probable transcription factor At3g04930", "gene_name": "T9J14.12", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T9J14.12", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable transcription factor At3g04930; Storekeeper-like protein At3g04930", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G04930)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;12535344;14593172;25561503;27862469;28011693;29654922", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4J625;Q8VYQ3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9CAV7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FDZ5-1", "uniprot_id": [ { "id": "URGT6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FDZ5", "type": "external" } ], "mass": 36943.0, "length": 335, "protein_name": "UDP-rhamnose/UDP-galactose transporter 6", "gene_name": "URGT6", "organism": "Arabidopsis", "refseq_name": "Nucleotide-sugar transporter family protein", "refseq_ac": [ { "id": "NP_001321551", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321551", "type": "external" } ], "gene_names_uniprotkb": "URGT6; F12G12.16; T15K4.8", "gene_names_refseq": "F12G12.16; F12G12_16; UDP-Rha/UDP-Gal transporter 6; URGT6", "protein_names_uniprotkb": "UDP-rhamnose/UDP-galactose transporter 6; Bi-functional UDP-rhamnose/UDP-galactose transporter; UDP-Rha/UDP-Gal transporter 6", "protein_names_refseq": "Nucleotide-sugar transporter family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G34020)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;15308754;19376835;21768351;22631563;23111157;23660473;23776212;25053812;25561503;25804536;27862469", "class_list": "", "function": "Nucleotide-sugar transporter that transports UDP-rhamnose or UDP-galactose and UMP in a strict counter-exchange mode., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L9B4", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0015297 antiporter activity;GO:0005459 UDP-galactose transmembrane transporter activity;GO:0055056 D-glucose transmembrane transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:1904659 D-glucose transmembrane transport;GO:0055085 transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q9FDZ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FFJ8-1", "uniprot_id": [ { "id": "LIMYB_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FFJ8", "type": "external" } ], "mass": 52690.0, "length": 449, "protein_name": "L10-interacting MYB domain-containing protein", "gene_name": "LIMYB", "organism": "Arabidopsis", "refseq_name": "Myb/SANT-like DNA-binding domain protein", "refseq_ac": [ { "id": "NP_001078536", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078536", "type": "external" } ], "gene_names_uniprotkb": "LIMYB; MJJ3.22", "gene_names_refseq": "MJJ3.22; MJJ3_22", "protein_names_uniprotkb": "L10-interacting MYB domain-containing protein", "protein_names_refseq": "Myb/SANT-like DNA-binding domain protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G05800)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "25561503;25707794;27862469;30833711;9330910", "class_list": "", "function": "Transcriptional repressor that associates with ribosomal protein promoters., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FFJ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FFK1-1", "uniprot_id": [ { "id": "SYP31_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FFK1", "type": "external" } ], "mass": 37311.0, "length": 336, "protein_name": "Syntaxin-31", "gene_name": "SYP31", "organism": "Arabidopsis", "refseq_name": "syntaxin of plants 31", "refseq_ac": [ { "id": "NP_196195", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196195", "type": "external" } ], "gene_names_uniprotkb": "SYP31; MJJ3.17", "gene_names_refseq": "ATSED5; ATSYP31; MJJ3.17; MJJ3_17; SED5; SYP31; T-SNARE SED 5; syntaxin of plants 31", "protein_names_uniprotkb": "Syntaxin-31; AtSED5; AtSYP31", "protein_names_refseq": "syntaxin of plants 31", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G05760)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10888666;12427991;14593172;27862469;9330910", "class_list": "", "function": "Vesicle trafficking protein that functions in the secretory pathway., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65099", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0012505 endomembrane system;GO:0031201 SNARE complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0061025 membrane fusion;GO:0006906 vesicle fusion;GO:0048278 vesicle docking", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FFK1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FFS3-1", "uniprot_id": [ { "id": "WRK24_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FFS3", "type": "external" } ], "mass": 20812.0, "length": 179, "protein_name": "Probable WRKY transcription factor 24", "gene_name": "WRKY24", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 24", "refseq_ac": [ { "id": "NP_198972", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198972", "type": "external" } ], "gene_names_uniprotkb": "WRKY24; MBK23.9", "gene_names_refseq": "ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 24; ATWRKY24; MBK23.9; MBK23_9; WRKY DNA-binding protein 24; WRKY24", "protein_names_uniprotkb": "Probable WRKY transcription factor 24; WRKY DNA-binding protein 24", "protein_names_refseq": "WRKY DNA-binding protein 24", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G41570)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "14593172;27862469;9330910", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9FFS3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FG35-1", "uniprot_id": [ { "id": "TBR_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FG35", "type": "external" } ], "mass": 67925.0, "length": 608, "protein_name": "Protein trichome birefringence", "gene_name": "TBR", "organism": "Arabidopsis", "refseq_name": "trichome birefringence-like protein (DUF828)", "refseq_ac": [ { "id": "NP_568173", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568173", "type": "external" } ], "gene_names_uniprotkb": "TBR; MPH15.5", "gene_names_refseq": "MPH15.5; MPH15_5; TRICHOME BIREFRINGENCE", "protein_names_uniprotkb": "Protein trichome birefringence", "protein_names_refseq": "trichome birefringence-like protein (DUF828)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06700)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "17316173;20388664;20657172;27862469", "class_list": "", "function": "Required during cellulose deposition (PubMed:20388664). May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (Probable). May be involved in the specific O-acetylation of cell wall polymers (By similarity)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "D9I8D9;Q8LEF8", "ec_number_list": [], "go_molecular_function": "GO:0008374 O-acyltransferase activity;GO:0016413 O-acetyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0016020 membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0030244 cellulose biosynthetic process;GO:0009827 plant-type cell wall modification;GO:0045489 pectin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9FG35-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FG68-1", "uniprot_id": [ { "id": "RAX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FG68", "type": "external" } ], "mass": 37045.0, "length": 329, "protein_name": "Transcription factor RAX1", "gene_name": "RAX1", "organism": "Arabidopsis", "refseq_name": "myb domain protein 37", "refseq_ac": [ { "id": "NP_197691", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197691", "type": "external" } ], "gene_names_uniprotkb": "RAX1; MYB37; T20O7.2", "gene_names_refseq": "ATMYB37; MYB37; RAX1; REGULATOR OF AXILLARY MERISTEMS 1; T20O7.2; T20O7_2; myb domain protein 37", "protein_names_uniprotkb": "Transcription factor RAX1; AtMYB37; Myb-related protein 37; Protein REGULATOR OF AXILLARY MERISTEMS 1", "protein_names_refseq": "myb domain protein 37", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23000)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11597504;14506289;16461581;16463103;16473968;17147637;17435248;27862469;9839469", "class_list": "", "function": "Transcription activator of genes involved in the regulation of meristematic competence, such as CUC2. Positively regulates axillary meristems (AMs) formation and development, especially at early phases of vegetative growth, probably by specifying a stem cell niche for AM formation. Modulates the negative regulation mediated by gibberellic acid on the timing of developmental phase transitions., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5YZ30;A5YZ33;A5YZ38;A5YZ50;A5YZ51;Q70YU8;Q70YV2;Q70YV7;Q70YV9;Q70YW0;Q70YW1;Q9ZTE5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0090506 axillary shoot meristem initiation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9FG68-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FGH9-1", "uniprot_id": [ { "id": "E70B1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FGH9", "type": "external" } ], "mass": 70640.0, "length": 624, "protein_name": "Exocyst complex component EXO70B1", "gene_name": "EXO70B1", "organism": "Arabidopsis", "refseq_name": "exocyst subunit exo70 family protein B1", "refseq_ac": [ { "id": "NP_200651", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200651", "type": "external" } ], "gene_names_uniprotkb": "EXO70B1; MQJ2.3", "gene_names_refseq": "ATEXO70B1; EXO70B1; MQJ2.2; MQJ2_2; exocyst subunit exo70 family protein B1", "protein_names_uniprotkb": "Exocyst complex component EXO70B1; AtExo70b1; Exocyst subunit Exo70 family protein B1", "protein_names_refseq": "exocyst subunit exo70 family protein B1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58430)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "14593172;23944713;25561503;27862469;27956469;35249253", "class_list": "", "function": "Component of an exocyst subcomplex specifically involved in autophagy-related, Golgi-independent membrane traffic to the vacuole. Regulates autophagosome formation and autophagy-related Golgi-independent import into the vacuole. Positive regulator of both abscisic acid (ABA)-promoted and mannitol (drought)-promoted stomatal closure (PubMed:27956469). Involved in the regulation of lateral root formation (PubMed:35249253)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005546 phosphatidylinositol-4,5-bisphosphate binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0070062 extracellular exosome;GO:0012505 endomembrane system", "go_biological_process": "GO:0006952 defense response;GO:0006955 immune response;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation;GO:0006887 exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9FGH9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FGM9-1", "uniprot_id": [ { "id": "HS235_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FGM9", "type": "external" } ], "mass": 23468.0, "length": 210, "protein_name": "23.5 kDa heat shock protein, mitochondrial", "gene_name": "HSP23.5", "organism": "Arabidopsis", "refseq_name": "HSP20-like chaperones superfamily protein", "refseq_ac": [ { "id": "NP_199957", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199957", "type": "external" } ], "gene_names_uniprotkb": "HSP23.5; MFG13.15", "gene_names_refseq": "MFG13.15; MFG13_15", "protein_names_uniprotkb": "23.5 kDa heat shock protein, mitochondrial; AtHsp23.5", "protein_names_refseq": "HSP20-like chaperones superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G51440)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "14593172;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCB4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006950 response to stress", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9FGM9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FGP8-1", "uniprot_id": [ { "id": "NFYC7_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FGP8", "type": "external" } ], "mass": 23195.0, "length": 212, "protein_name": "Nuclear transcription factor Y subunit C-7", "gene_name": "NFYC7", "organism": "Arabidopsis", "refseq_name": "nuclear factor Y, subunit C7", "refseq_ac": [ { "id": "NP_199858", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199858", "type": "external" } ], "gene_names_uniprotkb": "NFYC7; MBA10.2", "gene_names_refseq": "''nuclear factor Y; MBA10.2; MBA10_2; NF-YC7; nuclear factor Y; subunit C7''; subunit C7", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit C-7; AtNF-YC-7", "protein_names_refseq": "nuclear factor Y, subunit C7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50470)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11250072;11867211;18463617;20466843;27862469", "class_list": "", "function": "Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FGP8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FH18-1", "uniprot_id": [ { "id": "WIP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FH18", "type": "external" } ], "mass": 56514.0, "length": 509, "protein_name": "WPP domain-interacting protein 2", "gene_name": "WIP2", "organism": "Arabidopsis", "refseq_name": "WPP domain interacting protein 2", "refseq_ac": [ { "id": "NP_200432", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200432", "type": "external" } ], "gene_names_uniprotkb": "WIP2; K24C1.2", "gene_names_refseq": "K24C1.2; K24C1_2; WIP2; WPP domain interacting protein 2", "protein_names_uniprotkb": "WPP domain-interacting protein 2", "protein_names_refseq": "WPP domain interacting protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G56210)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10718197;17600715;18591351;19376835;21768351;22270916;23111157;23572148;24043427;25330379;25561503;25740919;25759303;27862469;30833711", "class_list": "", "function": "Mediates and enhances the nuclear envelope docking of RANGAP proteins mediated by WIT1 and WIT2 in the undifferentiated cells of root tips (PubMed:17600715). As component of the SUN-WIP-WIT2-KAKU1 complex, mediates the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes (PubMed:25759303)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5XUY7;Q5XUY8", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0031965 nuclear membrane;GO:0009504 cell plate", "go_biological_process": "GO:0006997 nucleus organization", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9FH18-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FI56-1", "uniprot_id": [ { "id": "CLPC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FI56", "type": "external" } ], "mass": 103453.0, "length": 929, "protein_name": "Chaperone protein ClpC1, chloroplastic", "gene_name": "CLPC1", "organism": "Arabidopsis", "refseq_name": "CLPC homologue 1", "refseq_ac": [ { "id": "NP_568746", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568746", "type": "external" } ], "gene_names_uniprotkb": "CLPC1; DCA1; HSP93-V; IRM1; K3K7.7", "gene_names_refseq": "ATHSP93-V; CLPC homologue 1; CLPC1; CLPC; DCA1; DE-REGULATED CAO ACCUMULATION 1; HEAT SHOCK PROTEIN 93-V; HSP93-V; K3K7.7; K3K7_7", "protein_names_uniprotkb": "Chaperone protein ClpC1, chloroplastic; ATP-dependent Clp protease ATP-binding subunit ClpC homolog 1; Casein lytic proteinase C1; Protein DE-REGULATED CAO ACCUMULATION 1; Protein IRON-RESCUED MUTANT 1", "protein_names_refseq": "CLPC homologue 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50920)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10470850;11299370;11982939;14593120;14593172;15304652;15516497;15563614;15659100;17144892;17291312;17376159;20382967;22085372;22353577;23898032;24599948;26419670;27862469", "class_list": "", "function": "Molecular chaperone that hydrolyzes ATP and is associated with the chloroplast protein import apparatus. May function as the motor for chloroplast protein translocation, as translocation requires ATP hydrolysis in the stroma. May interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. Involved in the regulation of chlorophyll b biosynthesis through the destabilization of chlorophyllide a oxygenase (CAO) protein in response to the accumulation of chlorophyll b. Involved in leaf iron homeostasis., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48931", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004176 ATP-dependent peptidase activity;GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009505 plant-type cell wall;GO:0009507 chloroplast;GO:0009532 plastid stroma", "go_biological_process": "GO:0009658 chloroplast organization;GO:0010380 regulation of chlorophyll biosynthetic process;GO:0045036 protein targeting to chloroplast;GO:0045037 protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q9FI56-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FIP9-1", "uniprot_id": [ { "id": "MYC3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FIP9", "type": "external" } ], "mass": 64992.0, "length": 592, "protein_name": "Transcription factor MYC3", "gene_name": "MYC3", "organism": "Arabidopsis", "refseq_name": "Basic helix-loop-helix (bHLH) DNA-binding family protein", "refseq_ac": [ { "id": "NP_199488", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199488", "type": "external" } ], "gene_names_uniprotkb": "MYC3; ATR2; BHLH5; EN36; MZA15.18", "gene_names_refseq": "MYC3; MZA15.18; MZA15_18", "protein_names_uniprotkb": "Transcription factor MYC3; AtbHLH5; Basic helix-loop-helix protein 5; Protein ALTERED TRYPTOPHAN REGULATION 2; Transcription factor ATR2; Transcription factor EN 36; bHLH 5; bHLH transcription factor bHLH005", "protein_names_refseq": "Basic helix-loop-helix (bHLH) DNA-binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46760)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "10048488;12136026;12679534;12897250;14600211;18463617;20360743;20466843;21242320;21321051;21335373;23111157;23328941;23572148;23660473;23776212;23943862;25561503;26091701;26187819;27862469;29654922;30833711", "class_list": "", "function": "Transcription factor involved in tryptophan, jasmonic acid (JA) and other stress-responsive gene regulation. With MYC2 and MYC4, controls additively subsets of JA-dependent responses. Can form complexes with all known glucosinolate-related MYBs to regulate glucosinolate biosynthesis. Binds to the G-box (5'-CACGTG-3') of promoters. Activates multiple TIFY/JAZ promoters., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W2F5", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043425 bHLH transcription factor binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009718 anthocyanin-containing compound biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q9FIP9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FIX8-1", "uniprot_id": [ { "id": "PCFS5_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FIX8", "type": "external" } ], "mass": 46049.0, "length": 410, "protein_name": "Polyadenylation and cleavage factor homolog 5", "gene_name": "PCFS5", "organism": "Arabidopsis", "refseq_name": "Pre-mRNA cleavage complex II", "refseq_ac": [ { "id": "NP_199175", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199175", "type": "external" } ], "gene_names_uniprotkb": "PCFS5; K9D7.12", "gene_names_refseq": "K9D7.12; K9D7_12", "protein_names_uniprotkb": "Polyadenylation and cleavage factor homolog 5", "protein_names_refseq": "Pre-mRNA cleavage complex II", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G43620)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10048488;15236668;18479511;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0000993 RNA polymerase II complex binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005849 mRNA cleavage factor complex", "go_biological_process": "GO:0006369 termination of RNA polymerase II transcription;GO:0031124 mRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9FIX8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FJ07-1", "uniprot_id": [ { "id": "MY111_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FJ07", "type": "external" } ], "mass": 38481.0, "length": 342, "protein_name": "Transcription factor MYB111", "gene_name": "MYB111", "organism": "Arabidopsis", "refseq_name": "myb domain protein 111", "refseq_ac": [ { "id": "NP_199744", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199744", "type": "external" } ], "gene_names_uniprotkb": "MYB111; K21P3.23; PFG3", "gene_names_refseq": "ARABIDOPSIS MYB DOMAIN PROTEIN 111; ATMYB111; K21P3.23; K21P3_23; MYB111; PFG3; PRODUCTION OF FLAVONOL GLYCOSIDES 3; myb domain protein 111", "protein_names_uniprotkb": "Transcription factor MYB111; AtMYB111; Myb-related protein 111; Protein PRODUCTION OF FLAVONOL GLYCOSIDES 3", "protein_names_refseq": "myb domain protein 111", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49330)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10048488;11597504;17419845;19895401;20731781;24846090;27862469", "class_list": "", "function": "Flavonol-specific transcription activator involved in the regulation of several genes of flavonoid biosynthesis. Activates the expression of CHS, CHI, F3H and FLS1. Controls flavonol biosynthesis primarily in cotyledons and leaves (PubMed:17419845, PubMed:20731781). Confers tolerance to UV-B (PubMed:19895401)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009416 response to light stimulus;GO:0010224 response to UV-B;GO:0051555 flavonol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9FJ07-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FJW5-1", "uniprot_id": [ { "id": "TRB2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FJW5", "type": "external" } ], "mass": 33014.0, "length": 299, "protein_name": "Telomere repeat-binding factor 2", "gene_name": "TRB2", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like/winged-helix DNA-binding family protein", "refseq_ac": [ { "id": "NP_201559", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201559", "type": "external" } ], "gene_names_uniprotkb": "TRB2; K9I9.15; TBP3", "gene_names_refseq": "ATTBP3; ATTRB2; K9I9.15; K9I9_15; TBP3; TELOMERE REPEAT BINDING FACTOR 2; TELOMERE-BINDING PROTEIN 3; TRB2", "protein_names_uniprotkb": "Telomere repeat-binding factor 2; AtTBP3; AtTRB2; MYB transcription factor; Telomere-binding protein 3", "protein_names_refseq": "Homeodomain-like/winged-helix DNA-binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G67580)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "14576282;14593172;15060584;15589838;16463103;18387366;19947985;25561503;27862469;9734815", "class_list": "", "function": "Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VX38", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0042162 telomeric DNA binding;GO:0000976 transcription cis-regulatory region binding;GO:0003691 double-stranded telomeric DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0000785 chromatin;GO:0000786 nucleosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006334 nucleosome assembly", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9FJW5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FK45-1", "uniprot_id": [ { "id": "Q9FK45_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FK45", "type": "external" } ], "mass": 35673.0, "length": 320, "protein_name": "RING/U-box superfamily protein", "gene_name": "MRG7.22", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_197327", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197327", "type": "external" } ], "gene_names_uniprotkb": "MRG7.22; MRG7_22", "gene_names_refseq": "MRG7.22; MRG7_22", "protein_names_uniprotkb": "RING/U-box superfamily protein", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18260)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130714;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9FK45-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FL03-1", "uniprot_id": [ { "id": "SCL4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FL03", "type": "external" } ], "mass": 64587.0, "length": 584, "protein_name": "Scarecrow-like protein 4", "gene_name": "SCL4", "organism": "Arabidopsis", "refseq_name": "GRAS family transcription factor", "refseq_ac": [ { "id": "NP_201478", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201478", "type": "external" } ], "gene_names_uniprotkb": "SCL4; MUD21.1", "gene_names_refseq": "MUD21.1; MUD21_1", "protein_names_uniprotkb": "Scarecrow-like protein 4; AtGRAS-32; AtSCL4; GRAS family protein 32", "protein_names_refseq": "GRAS family transcription factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66770)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "14593172;15316287;18500650;27862469;9679202", "class_list": "", "function": "Probable transcription factor involved in plant development., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4I8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FL03-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FL64-1", "uniprot_id": [ { "id": "Q9FL64_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FL64", "type": "external" } ], "mass": 30021.0, "length": 270, "protein_name": "C2H2-like zinc finger protein", "gene_name": "MDK4.18", "organism": "Arabidopsis", "refseq_name": "C2H2-like zinc finger protein", "refseq_ac": [ { "id": "NP_200247", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200247", "type": "external" } ], "gene_names_uniprotkb": "MDK4.18; MDK4_18", "gene_names_refseq": "MDK4.18; MDK4_18", "protein_names_uniprotkb": "C2H2-like zinc finger protein", "protein_names_refseq": "C2H2-like zinc finger protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G54360)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130714;20466843;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9FL64-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FL96-1", "uniprot_id": [ { "id": "SEM12_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FL96", "type": "external" } ], "mass": 8698.0, "length": 73, "protein_name": "Protein DSS1 HOMOLOG ON CHROMOSOME V", "gene_name": "DSS1(V)", "organism": "Arabidopsis", "refseq_name": "DSS1 homolog on chromosome V", "refseq_ac": [ { "id": "NP_199314", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199314", "type": "external" } ], "gene_names_uniprotkb": "DSS1(V); K21C13.20", "gene_names_refseq": "ATDSS1(V); DSS1 homolog on chromosome V; DSS1(V); K21C13.20; K21C13_20", "protein_names_uniprotkb": "Protein DSS1 HOMOLOG ON CHROMOSOME V; AtDSS1(V); Probable 26S proteasome complex subunit sem1-2", "protein_names_refseq": "DSS1 homolog on chromosome V", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45010)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "14593172;16415210;19843313;20466843;22951400;23776212;27862469;9679202", "class_list": "", "function": "Subunit of the 26S proteasome which plays a role in ubiquitin-dependent proteolysis (By similarity). Also associates with the TREX-2 complex that is required for transcription-coupled mRNA export (PubMed:19843313)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LD17", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000502 proteasome complex;GO:0008541 proteasome regulatory particle, lid subcomplex", "go_biological_process": "GO:0006406 mRNA export from nucleus;GO:0042542 response to hydrogen peroxide;GO:0000724 double-strand break repair via homologous recombination;GO:0043248 proteasome assembly", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9FL96-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FLD5-1", "uniprot_id": [ { "id": "ASD_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FLD5", "type": "external" } ], "mass": 60348.0, "length": 514, "protein_name": "AAA-ATPase ASD, mitochondrial", "gene_name": "AATP1", "organism": "Arabidopsis", "refseq_name": "AAA-ATPase 1", "refseq_ac": [ { "id": "NP_198817", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198817", "type": "external" } ], "gene_names_uniprotkb": "AATP1; ASD; MYH19.21", "gene_names_refseq": "AAA-ATPase 1; AATP1; ASD; ATPase-in-Seed-Development; MYH19.21; MYH19_21", "protein_names_uniprotkb": "AAA-ATPase ASD, mitochondrial; 3.6.1.-; AAA-ATPase 1; Protein ATPASE-IN-SEED-DEVELOPMENT", "protein_names_refseq": "AAA-ATPase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40010)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "21359673;23111157;27862469;9628582", "class_list": "", "function": "Required to regulate morphology and anatomy during seed maturation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0009409 response to cold;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid;GO:0010154 fruit development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9FLD5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FLP3-1", "uniprot_id": [ { "id": "MGE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FLP3", "type": "external" } ], "mass": 33203.0, "length": 302, "protein_name": "GrpE protein homolog 1, mitochondrial", "gene_name": "Mge1", "organism": "Arabidopsis", "refseq_name": "Co-chaperone GrpE family protein", "refseq_ac": [ { "id": "NP_200331", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200331", "type": "external" } ], "gene_names_uniprotkb": "Mge1; 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Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins (By similarity). Binds ATP (PubMed:17137349). Interacts with copper ions Cu(2+) (PubMed:20018591)., [UniProtKB, UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LDE9", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042803 protein homodimerization activity;GO:0051082 unfolded protein binding;GO:0051087 protein-folding chaperone binding;GO:0005507 copper ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0001405 PAM complex, Tim23 associated import motor;GO:0009507 chloroplast", "go_biological_process": "GO:0006457 protein folding;GO:0009411 response to UV;GO:0030150 protein import into mitochondrial matrix", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9FLP3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FLZ8-1", "uniprot_id": [ { "id": "EDL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FLZ8", "type": "external" } ], "mass": 28063.0, "length": 249, "protein_name": "EID1-like F-box protein 2", "gene_name": "EDL2", "organism": "Arabidopsis", "refseq_name": "EID1-like 2", "refseq_ac": [ { "id": "NP_198752", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198752", "type": "external" } ], "gene_names_uniprotkb": "EDL2; MUL8.40", "gene_names_refseq": "EDL2; EID1-like 2; MUL8.4; MUL8_4", "protein_names_uniprotkb": "EID1-like F-box protein 2", "protein_names_refseq": "EID1-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G39360)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "14593172;27862469;9628582", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9FLZ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMA3-1", "uniprot_id": [ { "id": "PEX5_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMA3", "type": "external" } ], "mass": 80912.0, "length": 728, "protein_name": "Peroxisome biogenesis protein 5", "gene_name": "PEX5", "organism": "Arabidopsis", "refseq_name": "peroxin 5", "refseq_ac": [ { "id": "NP_200440", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200440", "type": "external" } ], "gene_names_uniprotkb": "PEX5; MXK23.3", "gene_names_refseq": "ARABIDOPSIS PEROXIN 5; ATPEX5; EMB2790; EMBRYO DEFECTIVE 2790; MXK23.3; MXK23_3; PEX5; peroxin 5", "protein_names_uniprotkb": "Peroxisome biogenesis protein 5; AtPEX5; Peroxin-5; Peroxisomal targeting signal type 1 receptor; Pex5p", "protein_names_refseq": "peroxin 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G56290)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11063705;11118212;11978862;14593172;15548601;15637057;16256065;16272432;16813573;17478547;19246395;20130089;20466843;20974890;23111157;25561503;27862469;30833711;9628582", "class_list": "", "function": "Receptor that mediates peroxisomal import of proteins containing a C-terminal PTS1-type tripeptide peroxisomal targeting signal (SKL-type) (PubMed:17478547, PubMed:19246395, PubMed:20974890). Binds to cargo proteins containing a PTS1 peroxisomal targeting signal in the cytosol, and translocates them into the peroxisome matrix by passing through the PEX13-PEX14 docking complex along with cargo proteins (PubMed:11978862, PubMed:15637057). PEX5 receptor is then retrotranslocated into the cytosol, leading to release of bound cargo in the peroxisome matrix, and reset for a subsequent peroxisome import cycle (By similarity). In addition to promoting peroxisomal translocation of proteins containing a PTS1 peroxisomal targeting signal, mediates peroxisomal import of proteins containing a C-terminal PTS2-type peroxisomal targeting signal via its interaction with PEX7 (PubMed:11978862, PubMed:15548601, PubMed:15637057, PubMed:20130089, PubMed:20974890). Interaction with PEX7 only takes place when PEX7 is associated with cargo proteins containing a PTS2 peroxisomal targeting signal (By similarity). PEX7 along with PTS2-containing cargo proteins are then translocated through the PEX13-PEX14 docking complex together with PEX5 (By similarity). Necessary for the developmental elimination of obsolete peroxisome matrix proteins (PubMed:19246395)., [UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82467", "ec_number_list": [], "go_molecular_function": "GO:0005052 peroxisome matrix targeting signal-1 binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005778 peroxisomal membrane;GO:0005782 peroxisomal matrix;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0006625 protein targeting to peroxisome;GO:0016560 protein import into peroxisome matrix, docking;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q9FMA3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMD5-1", "uniprot_id": [ { "id": "TIC40_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMD5", "type": "external" } ], "mass": 48903.0, "length": 447, "protein_name": "Protein TIC 40, chloroplastic", "gene_name": "TIC40", "organism": "Arabidopsis", "refseq_name": "hydroxyproline-rich glycoprotein family protein", "refseq_ac": [ { "id": "NP_197165", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197165", "type": "external" } ], "gene_names_uniprotkb": "TIC40; MTG13.6; PDE120", "gene_names_refseq": "ATTIC40; MTG13.14; MTG13_14; PDE120; TIC40; pigment defective embryo 120; pigment defective embryo; translocon at the inner envelope membrane of chloroplasts 40", "protein_names_uniprotkb": "Protein TIC 40, chloroplastic; AtTIC40; Protein PIGMENT DEFECTIVE EMBRYO 120; Translocon at the inner envelope membrane of chloroplasts 40", "protein_names_refseq": "hydroxyproline-rich glycoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16620)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "12805212;14593172;15033972;15659100;15829604;17060496;17158958;17535810;17883373;18657235;20100520;21505433;23820729;27862469;30833711;9501997", "class_list": "", "function": "Involved in protein precursor import into chloroplasts. Part of the motor complex consisting of a co-chaperone (TIC40) and a chaperone (HSP93) associated with the import channel (TIC110). Causes the release of bound transit peptides from TIC110 and stimulates ATP hydrolysis by HSP93. Involved in reinsertion of proteins from the chloroplast stroma into the inner membrane., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0009658 chloroplast organization;GO:0045037 protein import into chloroplast stroma", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q9FMD5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMG4-1", "uniprot_id": [ { "id": "SC35_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMG4", "type": "external" } ], "mass": 35170.0, "length": 303, "protein_name": "Serine/arginine-rich splicing factor SC35", "gene_name": "SC35", "organism": "Arabidopsis", "refseq_name": "serine/arginine-rich splicing factor-like protein, putative", "refseq_ac": [ { "id": "NP_201225", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201225", "type": "external" } ], "gene_names_uniprotkb": "SC35; MSJ1.4", "gene_names_refseq": "ARABIDOPSIS THALIANA ORTHOLOG OF HUMAN SPLICING FACTOR SC35; ATSC35; At-SC35; MSJ1.4; MSJ1_4; SC35; ortholog of human splicing factor SC35", "protein_names_uniprotkb": "Serine/arginine-rich splicing factor SC35; At-SC35; AtSC35; SC35-like splicing factor", "protein_names_refseq": "serine/arginine-rich splicing factor-like protein, putative", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64200)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "12176998;14593172;15133128;15987817;16497658;16807317;17319848;18433157;18463617;19376835;20466843;20884799;21935421;22913769;23111157;23572148;23776212;25561503;27862469;28011693;29654922;30833711;9501997", "class_list": "", "function": "Probably involved in intron recognition and spliceosome assembly, but not involved in alternative splicing regulation of the SCL33 intron., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 28, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0016607 nuclear speck;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q9FMG4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMG6-1", "uniprot_id": [ { "id": "Q9FMG6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMG6", "type": "external" } ], "mass": 17804.0, "length": 158, "protein_name": "Tropomyosin", "gene_name": "MSJ1.2", "organism": "Arabidopsis", "refseq_name": "tropomyosin", "refseq_ac": [ { "id": "NP_001332145", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332145", "type": "external" } ], "gene_names_uniprotkb": "MSJ1.2; MSJ1_2", "gene_names_refseq": "MSJ1.2; MSJ1_2", "protein_names_uniprotkb": "Tropomyosin", "protein_names_refseq": "tropomyosin", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64180)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130714;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0090404 pollen tube tip", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9FMG6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FML4-1", "uniprot_id": [ { "id": "LOB_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FML4", "type": "external" } ], "mass": 20227.0, "length": 186, "protein_name": "Protein LATERAL ORGAN BOUNDARIES", "gene_name": "LOB", "organism": "Arabidopsis", "refseq_name": "Lateral organ boundaries (LOB) domain family protein", "refseq_ac": [ { "id": "NP_201114", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201114", "type": "external" } ], "gene_names_uniprotkb": "LOB; ASL4; MDC12.5", "gene_names_refseq": "LATERAL ORGAN BOUNDARIES; LOB; MDC12.5; MDC12_5", "protein_names_uniprotkb": "Protein LATERAL ORGAN BOUNDARIES; AS2-like protein 4; ASYMMETRIC LEAVES 2-like protein 4", "protein_names_refseq": "Lateral organ boundaries (LOB) domain family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63090)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11934861;12040093;12068116;19154202;27862469;9501997", "class_list": "", "function": "Not known; ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B7XG58;Q549W6;Q8VWF4", "ec_number_list": [], "go_molecular_function": "GO:0000976 transcription cis-regulatory region binding;GO:0001216 DNA-binding transcription activator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0010199 organ boundary specification between lateral organs and the meristem", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9FML4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMM7-1", "uniprot_id": [ { "id": "AI5L8_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMM7", "type": "external" } ], "mass": 41033.0, "length": 370, "protein_name": "ABSCISIC ACID-INSENSITIVE 5-like protein 8", "gene_name": "BZIP15", "organism": "Arabidopsis", "refseq_name": "Basic-leucine zipper (bZIP) transcription factor family protein", "refseq_ac": [ { "id": "NP_199105", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199105", "type": "external" } ], "gene_names_uniprotkb": "BZIP15; MBD2.11", "gene_names_refseq": "MBD2.11; MBD2_11", "protein_names_uniprotkb": "ABSCISIC ACID-INSENSITIVE 5-like protein 8; AtbZIP15; bZIP transcription factor 15", "protein_names_refseq": "Basic-leucine zipper (bZIP) transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42910)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11906833;12084834;27862469;9501997", "class_list": "", "function": "Could participate in abscisic acid-regulated gene expression., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9FMM7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMV5-1", "uniprot_id": [ { "id": "NFYC4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMV5", "type": "external" } ], "mass": 27032.0, "length": 250, "protein_name": "Nuclear transcription factor Y subunit C-4", "gene_name": "NFYC4", "organism": "Arabidopsis", "refseq_name": "nuclear factor Y, subunit C4", "refseq_ac": [ { "id": "NP_001032130", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032130", "type": "external" } ], "gene_names_uniprotkb": "NFYC4; MLE2.10", "gene_names_refseq": "''nuclear factor Y; MLE2.10; MLE2_10; NF-YC4; nuclear factor Y; subunit C4''; subunit C4", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit C-4; AtNF-YC-4", "protein_names_refseq": "nuclear factor Y, subunit C4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63470)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11250072;11867211;14593172;17322342;27862469;9501997", "class_list": "", "function": "Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Involved in the abscisic acid (ABA) signaling pathway., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0051247 positive regulation of protein metabolic process;GO:0010468 regulation of gene expression;GO:0009740 gibberellic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9FMV5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FPT5-1", "uniprot_id": [ { "id": "UBP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FPT5", "type": "external" } ], "mass": 120771.0, "length": 1083, "protein_name": "Ubiquitin carboxyl-terminal hydrolase 1", "gene_name": "UBP1", "organism": "Arabidopsis", "refseq_name": "ubiquitin-specific protease 1", "refseq_ac": [ { "id": "NP_565753", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565753", "type": "external" } ], "gene_names_uniprotkb": "UBP1; F24L7.8", "gene_names_refseq": "ATUBP1; F24L7.8; F24L7_8; UBP1; ubiquitin-specific protease 1", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase 1; 3.4.19.12; AtUBP1; Deubiquitinating enzyme 1; Ubiquitin thioesterase 1; Ubiquitin-specific-processing protease 1", "protein_names_refseq": "ubiquitin-specific protease 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G32780)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;11115897;27862469", "class_list": "", "function": "Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Is involved in resistance to the arginine analog canavanine (CAN)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48839", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0031647 regulation of protein stability", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9FPT5-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FQ08-1", "uniprot_id": [ { "id": "KU70_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FQ08", "type": "external" } ], "mass": 70291.0, "length": 621, "protein_name": "ATP-dependent DNA helicase 2 subunit KU70", "gene_name": "KU70", "organism": "Arabidopsis", "refseq_name": "ATP-dependent DNA helicase 2 subunit Ku70-like protein", "refseq_ac": [ { "id": "NP_564012", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564012", "type": "external" } ], "gene_names_uniprotkb": "KU70; F6I1.2", "gene_names_refseq": "ARABIDOPSIS THALIANA KU70 HOMOLOG; ATKU70; F6I1.2; F6I1_2; KU70 homolog; KU70-LIKE PROTEIN; KU70", "protein_names_uniprotkb": "ATP-dependent DNA helicase 2 subunit KU70; 3.6.4.12; ATP-dependent DNA helicase 2 subunit 1; ATP-dependent DNA helicase II 70 kDa subunit", "protein_names_refseq": "ATP-dependent DNA helicase 2 subunit Ku70-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16970)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130712;12032094;12140324;12148535;12182708;12511598;15589838;16396834;18515112;19245862;19376835;20844935;23111157;23172892;23328941;23572148;23660473;23776212;25561503;27862469;28011693", "class_list": "", "function": "Single-stranded DNA-dependent ATP-dependent helicase. Involved in DNA non-homologous end joining (NHEJ) required for double-strand break repair. When associated with KU80, binds to double-stranded telomeric and non-telomeric DNA sequences, but not to single-stranded DNA. Plays a role in maintaining telomere length. Acts as a negative regulator of telomerase. Required for maintenance of the telomeric C-rich strand., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZ56", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0003684 damaged DNA binding;GO:0016887 ATP hydrolysis activity;GO:0042162 telomeric DNA binding;GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0043564 Ku70:Ku80 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0000723 telomere maintenance;GO:0006303 double-strand break repair via nonhomologous end joining;GO:0009408 response to heat", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q9FQ08-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FR44-1", "uniprot_id": [ { "id": "PEAM1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FR44", "type": "external" } ], "mass": 56103.0, "length": 491, "protein_name": "Phosphoethanolamine N-methyltransferase 1", "gene_name": "NMT1", "organism": "Arabidopsis", "refseq_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "refseq_ac": [ { "id": "NP_188427", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188427", "type": "external" } ], "gene_names_uniprotkb": "NMT1; DPR2; MEB5.22; PEAMT; XPL1", "gene_names_refseq": "AT3G17990; N-METHYLTRANSFERASE 1; NMT1; PEAMT; S-ADENOSYL-L-METHIONINE:PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE; S-ADENOSYLMETHIONINE:PHOSPHO-ETHANOLAMINE; XIPOTL 1; XPL1", "protein_names_uniprotkb": "Phosphoethanolamine N-methyltransferase 1; 2.1.1.103; AtNMT1; PEAMT1; Protein DEFECTIVE PRIMARY ROOT 2; Protein XIPOTL 1", "protein_names_refseq": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18000)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10819329;11115895;12215503;14593172;15295103;22223895;23328941;27862469;29084845;29777000;30218542;30381317;30518673;31246280;35560207;35789105", "class_list": "", "function": "Involved in phosphocholine biosynthesis (PubMed:11115895, PubMed:15295103, PubMed:30218542). Catalyzes the N-methylation of phosphoethanolamine, phosphomonomethylethanolamine and phosphodimethylethanolamine, the three methylation steps required to convert phosphoethanolamine to phosphocholine (PC) (PubMed:11115895). Required for root system development and epidermal cell integrity through its role in choline and phospholipid metabolism (PubMed:15295103). In association with NMT3, regulates PC homeostasis, phase transition at the shoot apex, coordinated organ development, and fertility (PubMed:29777000). In association with NMT3, involved in phosphatidylcholine biosynthesis and vascular development (PubMed:30218542). In association with NMT2, involved in the production of phosphatidylcholine in roots, essential for root development (PubMed:30518673). In association with NMT2 produce phosphocholine mainly for leaf growth maintenance (PubMed:35560207). Contributes to the regulation of overall root zonation dynamics through reactive oxygen species (ROS) and auxin-regulated cell differentiation (PubMed:31246280). Participates in root development of primary root elongation under salt stress conditions by balancing reactive oxygen species (ROS) production and distribution through abscisic acid (ABA) signaling (PubMed:35789105)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LVH3", "ec_number_list": [ { "id": "2.1.1.103", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.103", "type": "external" } ], "go_molecular_function": "GO:0008168 methyltransferase activity;GO:0008170 N-methyltransferase activity;GO:0000234 phosphoethanolamine N-methyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006656 phosphatidylcholine biosynthetic process;GO:0032259 methylation;GO:0009826 unidimensional cell growth;GO:0009555 pollen development;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q9FR44-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FUP0-1", "uniprot_id": [ { "id": "OPR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FUP0", "type": "external" } ], "mass": 42691.0, "length": 391, "protein_name": "12-oxophytodienoate reductase 3", "gene_name": "OPR3", "organism": "Arabidopsis", "refseq_name": "oxophytodienoate-reductase 3", "refseq_ac": [ { "id": "NP_001077884", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077884", "type": "external" } ], "gene_names_uniprotkb": "OPR3; DDE1; F5K7.19", "gene_names_refseq": "11-REDUCTASE; 12-OXO-PHYTODIENOATE REDUCTASE; 12-OXOPHYTODIENOATE-10; AtOPR3; DDE1; DELAYED DEHISCENCE 1; F5K7.19; F5K7_19; OPR3; oxophytodienoate-reductase 3", "protein_names_uniprotkb": "12-oxophytodienoate reductase 3; 1.3.1.42; 12-oxophytodienoate-10,11-reductase 3; AtOPR3; OPDA-reductase 3; Protein DELAYED DEHISCENCE 1", "protein_names_refseq": "oxophytodienoate-reductase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G06050)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;10872231;10899973;10973494;11094980;12445129;14593172;15468319;17850744;17951448;19423640;19605548;19765234;21915915;22223895;27862469;29291349", "class_list": "", "function": "Specifically cleaves olefinic bonds in cyclic enones (PubMed:11094980). Involved in the biosynthesis of jasmonic acid (JA) and perhaps in biosynthesis or metabolism of other oxylipin signaling moleclules (PubMed:10872231, PubMed:10973494, PubMed:29291349). Required for the spatial and temporal regulation of JA levels during dehiscence of anthers, promoting the stomium degeneration program (PubMed:10899973, PubMed:10973494). In vitro, reduces 9S,13S-12-oxophytodienoic acid (9S,13S-OPDA) and 9R,13R-OPDA to 9S,13S-OPC-8:0 and 9R,13R-OPC-8:0, respectively (PubMed:10872231). Can detoxify the explosive 2,4,6-trinitrotoluene (TNT) in vitro by catalyzing its nitroreduction to form hydroxylamino-dinitrotoluene (HADNT) (PubMed:19605548)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DGR2;Q9LLD6;Q9SCY4;Q9XHD2;Q9ZQ01", "ec_number_list": [ { "id": "1.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.-", "type": "external" }, { "id": "1.3.1.42", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.42", "type": "external" } ], "go_molecular_function": "GO:0010181 FMN binding;GO:0016629 12-oxophytodienoate reductase activity", "go_cellular_component": "GO:0005777 peroxisome", "go_biological_process": "GO:0009620 response to fungus;GO:0010193 response to ozone;GO:0031408 oxylipin biosynthetic process;GO:0009695 jasmonic acid biosynthetic process;GO:0048443 stamen development", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q9FUP0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FWR4-1", "uniprot_id": [ { "id": "DHAR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FWR4", "type": "external" } ], "mass": 23641.0, "length": 213, "protein_name": "Glutathione S-transferase DHAR1, mitochondrial", "gene_name": "DHAR1", "organism": "Arabidopsis", "refseq_name": "dehydroascorbate reductase", "refseq_ac": [ { "id": "NP_173387", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173387", "type": "external" } ], "gene_names_uniprotkb": "DHAR1; DHAR5; F14P1.9; F18O14.22", "gene_names_refseq": "ATDHAR1; DEHYDROASCORBATE REDUCTASE 5; DHAR1; DHAR5; F14P1.9; F14P1_9; dehydroascorbate reductase", "protein_names_uniprotkb": "Glutathione S-transferase DHAR1, mitochondrial; 1.8.5.1; 2.5.1.18; AtDHAR1; CLIC homolog 1; Chloride intracellular channel homolog 1; GSH-dependent dehydroascorbate reductase 1; Glutathione-dependent dehydroascorbate reductase 1; mtDHAR", "protein_names_refseq": "dehydroascorbate reductase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G19570)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11910074;12077129;12954611;14593172;15494554;16055689;16262714;16361320;16526091;17267397;19329564;27862469", "class_list": "", "function": "Displays a dual function. As a soluble protein, exhibits glutathione-dependent thiol transferase and dehydroascorbate (DHA) reductase activities (PubMed:12077129). Key component of the ascorbate recycling system. Involved in the redox homeostasis, especially in scavenging of ROS under oxidative stresses, subsequently to biotic or abiotic inducers (PubMed:16262714). As a peripheral membrane protein, could also function as voltage-gated ion channel (PubMed:17267397)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MRM5;Q9LN37", "ec_number_list": [ { "id": "2.5.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.18", "type": "external" }, { "id": "1.8.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.5.1", "type": "external" }, { "id": "5.2.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.-", "type": "external" } ], "go_molecular_function": "GO:0004364 glutathione transferase activity;GO:0005507 copper ion binding;GO:0045174 glutathione dehydrogenase (ascorbate) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006952 defense response;GO:0010043 response to zinc ion;GO:0034220 monoatomic ion transmembrane transport;GO:0070301 cellular response to hydrogen peroxide;GO:0010193 response to ozone", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9FWR4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FX43-1", "uniprot_id": [ { "id": "M2K9_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FX43", "type": "external" } ], "mass": 34347.0, "length": 310, "protein_name": "Mitogen-activated protein kinase kinase 9", "gene_name": "MKK9", "organism": "Arabidopsis", "refseq_name": "MAP kinase kinase 9", "refseq_ac": [ { "id": "NP_177492", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177492", "type": "external" } ], "gene_names_uniprotkb": "MKK9; MAP2K9; T9L24.32", "gene_names_refseq": "ATMKK9; MAP kinase kinase 9; MKK9; T9L24.32; T9L24_32", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase 9; 2.7.12.2; AtMKK9; MAP kinase kinase 9", "protein_names_refseq": "MAP kinase kinase 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G73500)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11910074;14593172;16537113;18273012;18693252;19251906;19704518;21947882;27862469", "class_list": "", "function": "MKK9-MPK3/MPK6 module phosphorylates and activates EIN3, leading to the promotion of EIN3-mediated transcription in ethylene signaling. Autophosphorylates and also phosphorylates MPK3 and MPK6. Plays an important role in ethylene and camalexin biosynthesis and in salt stress response. MKK9-MPK6 module positively regulates leaf senescence., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0030295 protein kinase activator activity;GO:0004708 MAP kinase kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0098542 defense response to other organism;GO:0007165 signal transduction;GO:0071456 cellular response to hypoxia;GO:0009611 response to wounding;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9FX43-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FY69-1", "uniprot_id": [ { "id": "BH143_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FY69", "type": "external" } ], "mass": 36444.0, "length": 326, "protein_name": "Transcription factor bHLH143", "gene_name": "BHLH143", "organism": "Arabidopsis", "refseq_name": "transcription factor bHLH143", "refseq_ac": [ { "id": "NP_196508", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196508", "type": "external" } ], "gene_names_uniprotkb": "BHLH143; EN129; T5E8.260", "gene_names_refseq": "T5E8.260; T5E8_260", "protein_names_uniprotkb": "Transcription factor bHLH143; AtbHLH143; Basic helix-loop-helix protein 143; Transcription factor EN 129; bHLH 143; bHLH transcription factor bHLH143", "protein_names_refseq": "transcription factor bHLH143", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09460)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;12897250;14593172;14600211;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FY69-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FY93-1", "uniprot_id": [ { "id": "NAC83_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FY93", "type": "external" } ], "mass": 28570.0, "length": 252, "protein_name": "NAC domain-containing protein 83", "gene_name": "NAC083", "organism": "Arabidopsis", "refseq_name": "NAC domain containing protein 83", "refseq_ac": [ { "id": "NP_196822", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196822", "type": "external" } ], "gene_names_uniprotkb": "NAC083; T19L5.140; VNI2", "gene_names_refseq": "ANAC083; NAC domain containing protein 83; NAC083; T19L5.140; T19L5_140; VND-interacting 2; VNI2", "protein_names_uniprotkb": "NAC domain-containing protein 83; ANAC083; Protein VND-INTERACTING 2", "protein_names_refseq": "NAC domain containing protein 83", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13180)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;14593172;15029955;20388856;21673078;24442717;27862469", "class_list": "", "function": "Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010629 negative regulation of gene expression;GO:0045892 negative regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9FY93-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FZF2-1", "uniprot_id": [ { "id": "Q9FZF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FZF2", "type": "external" } ], "mass": 21283.0, "length": 184, "protein_name": "AGAMOUS-like 102", "gene_name": "AGL102", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 102", "refseq_ac": [ { "id": "NP_175207", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175207", "type": "external" } ], "gene_names_uniprotkb": "AGL102; AGAMOUS-like 102; T2E6.17; T2E6_17", "gene_names_refseq": "AGAMOUS-like 102; AGL102; T2E6.17; T2E6_17", "protein_names_uniprotkb": "AGAMOUS-like 102", "protein_names_refseq": "AGAMOUS-like 102", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G47760)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9FZF2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LD83-1", "uniprot_id": [ { "id": "SLAC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LD83", "type": "external" } ], "mass": 63235.0, "length": 556, "protein_name": "Guard cell S-type anion channel SLAC1", "gene_name": "SLAC1", "organism": "Arabidopsis", "refseq_name": "C4-dicarboxylate transporter/malic acid transport protein", "refseq_ac": [ { "id": "NP_563909", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563909", "type": "external" } ], "gene_names_uniprotkb": "SLAC1; CDI3; F5O11.23; OZS1; RCD3; T12C24.3", "gene_names_refseq": "CARBON DIOXIDE INSENSITIVE 3; CDI3; F5O11.23; F5O11_23; OZONE-SENSITIVE 1; OZS1; RADICAL-INDUCED CELL DEATH 3; RCD3; SLAC1; SLOW ANION CHANNEL-ASSOCIATED 1", "protein_names_uniprotkb": "Guard cell S-type anion channel SLAC1; Protein CARBON DIOXIDE INSENSITIVE 3; Protein OZONE-SENSITIVE 1; Protein RADICAL-INDUCED CELL DEATH 3; Protein SLOW ANION CHANNEL-ASSOCIATED 1", "protein_names_refseq": "C4-dicarboxylate transporter/malic acid transport protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12480)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;14593172;18084014;18305482;18305484;19181866;19955405;19955427;20128877;20345603;20385816;22730405;25561503;27002025;27694184;27862469;29463779;30361234", "class_list": "", "function": "Slow, weak voltage-dependent S-type anion efflux channel involved in maintenance of anion homeostasis. Cl(-) efflux through SLAC1 causes membrane depolarization, which activates outward-rectifying K1 channels, leading to KCl and water efflux to reduce turgor further and cause stomatal closure, that reduces water loss and promotes leaf turgor. Essential for stomatal closure in response to CO(2), abscisic acid (ABA), ozone O(3), light/dark transitions, humidity change, calcium ions, hydrogen peroxide H(2)O(2), reactive oxygen species (ROS), and nitric oxide. Binds to the highly selective inward-rectifying potassium channels KAT1 and AKT2, and inhibits their activities. Functions as an essential negative regulator of inward potassium channels in guard cells. Essential for the efficient stomatal closure and opening in guard cells (PubMed:27002025). Involved in the local and/or systemic stomatal responses (e.g. stomatal closure) to light stress (PubMed:29463779)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019901 protein kinase binding;GO:0008509 monoatomic anion transmembrane transporter activity;GO:0019903 protein phosphatase binding;GO:0008308 voltage-gated monoatomic anion channel activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0015711 organic anion transport;GO:0009416 response to light stimulus;GO:0050891 multicellular organismal-level water homeostasis;GO:0006820 monoatomic anion transport;GO:0006873 intracellular monoatomic ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q9LD83-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LHP2-1", "uniprot_id": [ { "id": "SL30A_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LHP2", "type": "external" } ], "mass": 30227.0, "length": 262, "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL30A", "gene_name": "SCL30A", "organism": "Arabidopsis", "refseq_name": "SC35-like splicing factor 30A", "refseq_ac": [ { "id": "NP_187966", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187966", "type": "external" } ], "gene_names_uniprotkb": "SCL30A; K20M4.1", "gene_names_refseq": "At-SCL30A; SC35-like splicing factor 30A; SCL30A", "protein_names_uniprotkb": "Serine/arginine-rich SC35-like splicing factor SCL30A; At-SCL30A; AtSCL30A; SC35-like splicing factor 30A; Serine/arginine-rich splicing factor 30A", "protein_names_refseq": "SC35-like splicing factor 30A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13570)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "10907853;12176998;14593172;15133128;15987817;16497658;16520337;16807317;17319848;18463617;19376835;20466843;20884799;21935421;22913769;23111157;23328941;23572148;23660473;23776212;25561503;26187819;27862469;28011693;30833711", "class_list": "", "function": "Involved in intron recognition and spliceosome assembly. Binds probably to multiple 5'-GAAG-3' repeats found in its third intron, suggesting autoregulation of alternative splicing (PubMed:22913769). May be necessary for accurate splicing of the 3' region of introns., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 28, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FYA8", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0016607 nuclear speck;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "Q9LHP2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LJG8-1", "uniprot_id": [ { "id": "ASIL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LJG8", "type": "external" } ], "mass": 48314.0, "length": 443, "protein_name": "Trihelix transcription factor ASIL2", "gene_name": "ASIL2", "organism": "Arabidopsis", "refseq_name": "sequence-specific DNA binding transcription factor", "refseq_ac": [ { "id": "NP_188034", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188034", "type": "external" } ], "gene_names_uniprotkb": "ASIL2; MAG2.16", "gene_names_refseq": "ASIL2; Arabidopsis 6B-interacting protein 1-like 2", "protein_names_uniprotkb": "Trihelix transcription factor ASIL2; 6B-interacting protein 1-like 2; Trihelix DNA-binding protein ASIL2", "protein_names_refseq": "sequence-specific DNA binding transcription factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14180)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10907853;14593172;21330492;25561503;27862469", "class_list": "", "function": "Transcription regulator that may repress the maturation program during early embryogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9LJG8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LJI5-1", "uniprot_id": [ { "id": "VA0D1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LJI5", "type": "external" } ], "mass": 40792.0, "length": 351, "protein_name": "V-type proton ATPase subunit d1", "gene_name": "VHA-d1", "organism": "Arabidopsis", "refseq_name": "ATPase, V0/A0 complex, subunit C/D", "refseq_ac": [ { "id": "NP_189512", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189512", "type": "external" } ], "gene_names_uniprotkb": "VHA-d1; MZN14.21", "gene_names_refseq": "", "protein_names_uniprotkb": "V-type proton ATPase subunit d1; V-ATPase subunit d1; Vacuolar H(+)-ATPase subunit d isoform 1; Vacuolar proton pump subunit d1", "protein_names_refseq": "ATPase, V0/A0 complex, subunit C/D", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G28710)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10819329;11950611;14593172;27862469", "class_list": "", "function": "Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005774 vacuolar membrane;GO:0005773 vacuole", "go_biological_process": "GO:0007034 vacuolar transport;GO:0007035 vacuolar acidification", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9LJI5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LKW9-1", "uniprot_id": [ { "id": "NHX7_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LKW9", "type": "external" } ], "mass": 127188.0, "length": 1146, "protein_name": "Sodium/hydrogen exchanger 7", "gene_name": "NHX7", "organism": "Arabidopsis", "refseq_name": "sodium proton exchanger, putative (NHX7) (SOS1)", "refseq_ac": [ { "id": "NP_178307", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178307", "type": "external" } ], "gene_names_uniprotkb": "NHX7; F14H20.5; SOS1", "gene_names_refseq": "ARABIDOPSIS NA+/H+ ANTIPORTER 7; ARABIDOPSIS SALT OVERLY SENSITIVE 1; ATNHX7; ATSOS1; F14H20.5; F14H20_5; SALT OVERLY SENSITIVE 1; SOS1", "protein_names_uniprotkb": "Sodium/hydrogen exchanger 7; NHE-7; Na(+)/H(+) exchanger 7; Protein SALT OVERLY SENSITIVE 1", "protein_names_refseq": "sodium proton exchanger, putative (NHX7) (SOS1)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G01980)", "pathway_count": 1, "publication_count": 25, "publication_id_list": "10617197;10823923;11884687;12034882;12070350;12239394;12469134;12805632;14506206;14593172;15308754;17317660;17651370;17869214;18463617;20374526;20466843;23572148;23660473;25561503;27419465;27862469;28011693;30833711;31858132", "class_list": "", "function": "Acts in electroneutral exchange of protons for cations such as Na(+) or Li(+) across plasma membrane. Involved in Na(+) and K(+) homeostasis. Required for cytoplasmic Na(+) and Li(+) detoxification by secreting them from the cytoplasm to the extracellular space. Regulates Na(+) content of the xylem sap., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZPS6", "ec_number_list": [], "go_molecular_function": "GO:0015385 sodium:proton antiporter activity;GO:0015386 potassium:proton antiporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0042542 response to hydrogen peroxide;GO:0000302 response to reactive oxygen species;GO:0009651 response to salt stress;GO:2000377 regulation of reactive oxygen species metabolic process", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "Q9LKW9-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LM15-1", "uniprot_id": [ { "id": "RA213_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LM15", "type": "external" } ], "mass": 29137.0, "length": 261, "protein_name": "Ethylene-responsive transcription factor RAP2-13", "gene_name": "RAP2-13", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_173638", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173638", "type": "external" } ], "gene_names_uniprotkb": "RAP2-13; ERF058; F16L1.8", "gene_names_refseq": "F16L1.8; F16L1_8; RAP2.4; related to AP2 4", "protein_names_uniprotkb": "Ethylene-responsive transcription factor RAP2-13; Ethylene-responsive transcription factor ERF058; Protein RELATED TO APETALA2 13", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22190)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;16407444;19843165;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0009414 response to water deprivation;GO:0009620 response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9LM15-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LM46-1", "uniprot_id": [ { "id": "AG104_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LM46", "type": "external" } ], "mass": 38279.0, "length": 335, "protein_name": "Agamous-like MADS-box protein AGL104", "gene_name": "AGL104", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 104", "refseq_ac": [ { "id": "NP_173632", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173632", "type": "external" } ], "gene_names_uniprotkb": "AGL104; F2E2.20", "gene_names_refseq": "AGAMOUS-like 104; AGL104; F2E2.20; F2E2_20", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL104", "protein_names_refseq": "AGAMOUS-like 104", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22130)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12837945;12949148;17147637;19211705;27862469", "class_list": "", "function": "Probable transcription factor that forms heterodimers with the MADS-box proteins AGL30 and AGL65 and is involved in the regulation of pollen maturation at the late stages of pollen development and pollen tube growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q76K81", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009555 pollen development;GO:0010152 pollen maturation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9LM46-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LNP6-1", "uniprot_id": [ { "id": "NFYA8_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LNP6", "type": "external" } ], "mass": 36463.0, "length": 328, "protein_name": "Nuclear transcription factor Y subunit A-8", "gene_name": "NFYA8", "organism": "Arabidopsis", "refseq_name": "nuclear factor Y, subunit A8", "refseq_ac": [ { "id": "NP_001185024", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185024", "type": "external" } ], "gene_names_uniprotkb": "NFYA8; F11A6.14; F1L3.29", "gene_names_refseq": "''nuclear factor Y; F1L3.29; F1L3_29; NF-YA8; nuclear factor Y; subunit A8''; subunit A8", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit A-8; AtNF-YA-8", "protein_names_refseq": "nuclear factor Y, subunit A8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17590)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;11867211;27862469", "class_list": "", "function": "Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3LF92", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9LNP6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LNT9-1", "uniprot_id": [ { "id": "ASK4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LNT9", "type": "external" } ], "mass": 18187.0, "length": 163, "protein_name": "SKP1-like protein 4", "gene_name": "ASK4", "organism": "Arabidopsis", "refseq_name": "SKP1-like 4", "refseq_ac": [ { "id": "NP_564105", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564105", "type": "external" } ], "gene_names_uniprotkb": "ASK4; T20H2.8", "gene_names_refseq": "ASK4; SK4; SKP1-like 4; T20H2.8; T20H2_8", "protein_names_uniprotkb": "SKP1-like protein 4; AtSK4", "protein_names_refseq": "SKP1-like 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20140)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12169662;12970487;14593172;27862469", "class_list": "", "function": "Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0097602 cullin family protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9LNT9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LPF1-1", "uniprot_id": [ { "id": "WTR8_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LPF1", "type": "external" } ], "mass": 39947.0, "length": 370, "protein_name": "WAT1-related protein At1g44800", "gene_name": "T12C22.7", "organism": "Arabidopsis", "refseq_name": "nodulin MtN21 /EamA-like transporter family protein", "refseq_ac": [ { "id": "NP_175101", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175101", "type": "external" } ], "gene_names_uniprotkb": "T12C22.7", "gene_names_refseq": "SIAR1; Siliques Are Red 1; T12C22.7; T12C22_7; UMAMIT18; Usually multiple acids move in and out Transporters 18", "protein_names_uniprotkb": "WAT1-related protein At1g44800", "protein_names_refseq": "nodulin MtN21 /EamA-like transporter family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G44800)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;23111157;27419465;27862469;28011693", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LEI9", "ec_number_list": [], "go_molecular_function": "GO:0015171 amino acid transmembrane transporter activity;GO:0034639 L-amino acid efflux transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0006865 amino acid transport;GO:0080144 intracellular amino acid homeostasis;GO:0032973 amino acid export across plasma membrane;GO:0043090 amino acid import", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9LPF1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LPW7-1", "uniprot_id": [ { "id": "AFB3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LPW7", "type": "external" } ], "mass": 64906.0, "length": 577, "protein_name": "Protein AUXIN SIGNALING F-BOX 3", "gene_name": "AFB3", "organism": "Arabidopsis", "refseq_name": "auxin signaling F-box 3", "refseq_ac": [ { "id": "NP_563915", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563915", "type": "external" } ], "gene_names_uniprotkb": "AFB3; F13K23.7", "gene_names_refseq": "AFB3; F13K23.7; F13K23_7; auxin signaling F-box 3", "protein_names_uniprotkb": "Protein AUXIN SIGNALING F-BOX 3", "protein_names_refseq": "auxin signaling F-box 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12820)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15917797;15992545;16627744;27862469", "class_list": "", "function": "Confers sensitivity to the virulent bacterial pathogen P.syringae (By similarity). Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Auxin receptor that mediates Aux/IAA proteins proteasomal degradation and auxin-regulated transcription. Involved in embryogenesis regulation by auxin., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000822 inositol hexakisphosphate binding;GO:0010011 auxin binding;GO:0038198 auxin receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0006952 defense response;GO:0016567 protein ubiquitination;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0009734 auxin-activated signaling pathway;GO:0010152 pollen maturation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9LPW7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true } ]